Pregenerated sensors for SERPINB3B (Mus musculus)
Ensembl gene IDs: ENSMUSG00000073602Ensembl transcript IDs: ENSMUST00000086694.11, ENSMUST00000166100.2
Found 52 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CAA 90 bp | GAAGGTCTGATTTTCTCTAGCTTGCTTCACACAGGGCACAGATGCATGCTAAATTTAGCTGCAGCAACCTaGTTAACTTTCTGGACACAT | + |
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Preference number: 3 (lower is better) Translates to: EGLIFSSLLHTGHRCMLNLAAAT*LTFWTH Trigger: ATGTGTCCAGAAAGTTAACAAGGTTGCTGCAGCTAA...ATTTAGCATGCATCTGTGCCCTGTGTGAAGCAAGCTAGAGAAAATCAGACCTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086694.11 ENSMUST00000166100.2 |
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| 3UTR-3UTR CAA 90 bp | GAAGGTCTGATTTTCTCTAGCTTGCTTCACACAGGGCACAGATGCATGCTAAATTATTCCTTCATCCTTTaGTTGAACGTTTTCCCCCAG | + |
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Preference number: 3 (lower is better) Translates to: EGLIFSSLLHTGHRCMLNYSFIL*LNVFPQ Trigger: CTGGGGGAAAACGTTCAACAAAAGGATGAAGGAATA...ATTTAGCATGCATCTGTGCCCTGTGTGAAGCAAGCTAGAGAAAATCAGACCTTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000086694.11 ENSMUST00000166100.2 |
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| CDS-3UTR TCA 90 bp | AGAATGAAGGAAGAGAAACATGTTTCCAGGCCTCAATTAGCTGCAGCAACCTTGTTCTGCTATCTGTGCTaGTCTTACACTGACTTCCAC | + |
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Preference number: 4 (lower is better) Translates to: RMKEEKHVSRPQLAAATLFCYLC*SYTDFH Trigger: GTGGAAGTCAGTGTAAGATCAGCACAGATAGCAGAA...CAAGGTTGCTGCAGCTAATTGAGGCCTGGAAACATGTTTCTCTTCCTTCATTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086694.11 ENSMUST00000166100.2 |
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| CDS-3UTR TCA 90 bp | GAAGGTCTGATTTTCTCTAGCTTGCTTCACACAGGGCACAGATGCATGCTAAATTTCTGCTATCTGTGCTaGTCTTACACTGACTTCCAC | + |
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Preference number: 4 (lower is better) Translates to: EGLIFSSLLHTGHRCMLNFCYLC*SYTDFH Trigger: GTGGAAGTCAGTGTAAGATCAGCACAGATAGCAGAA...ATTTAGCATGCATCTGTGCCCTGTGTGAAGCAAGCTAGAGAAAATCAGACCTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086694.11 ENSMUST00000166100.2 |
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| CDS-3UTR GCA 90 bp | GAAGGTCTGATTTTCTCTAGCTTGCTTCACACAGGGCACAGATGCATGCTAAATTCTGATTCTCTGAGCTaGCTGTACATTTCAACTGCG | + |
|
Preference number: 4 (lower is better) Translates to: EGLIFSSLLHTGHRCMLNSDSLS*LYISTA Trigger: CGCAGTTGAAATGTACAGGCAGCTCAGAGAATCAGA...ATTTAGCATGCATCTGTGCCCTGTGTGAAGCAAGCTAGAGAAAATCAGACCTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086694.11 ENSMUST00000166100.2 |
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| CDS-3UTR GCA 90 bp | AGAATGAAGGAAGAGAAACATGTTTCCAGGCCTCAATTAGCTGCAGCAACCTTGTCTGATTCTCTGAGCTaGCTGTACATTTCAACTGCG | + |
|
Preference number: 4 (lower is better) Translates to: RMKEEKHVSRPQLAAATLSDSLS*LYISTA Trigger: CGCAGTTGAAATGTACAGGCAGCTCAGAGAATCAGA...CAAGGTTGCTGCAGCTAATTGAGGCCTGGAAACATGTTTCTCTTCCTTCATTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086694.11 ENSMUST00000166100.2 |
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| CDS-3UTR CCA 90 bp | GAAGGTCTGATTTTCTCTAGCTTGCTTCACACAGGGCACAGATGCATGCTAAATTTTCAGTGTTTCCTTTaGCTCCAAGCTGGAGCATTG | + |
|
Preference number: 4 (lower is better) Translates to: EGLIFSSLLHTGHRCMLNFQCFL*LQAGAL Trigger: CAATGCTCCAGCTTGGAGCCAAAGGAAACACTGAAA...ATTTAGCATGCATCTGTGCCCTGTGTGAAGCAAGCTAGAGAAAATCAGACCTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000086694.11 ENSMUST00000166100.2 |
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| CDS-3UTR CCA 90 bp | AGAATGAAGGAAGAGAAACATGTTTCCAGGCCTCAATTAGCTGCAGCAACCTTGTTTCAGTGTTTCCTTTaGCTCCAAGCTGGAGCATTG | + |
|
Preference number: 4 (lower is better) Translates to: RMKEEKHVSRPQLAAATLFQCFL*LQAGAL Trigger: CAATGCTCCAGCTTGGAGCCAAAGGAAACACTGAAA...CAAGGTTGCTGCAGCTAATTGAGGCCTGGAAACATGTTTCTCTTCCTTCATTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086694.11 ENSMUST00000166100.2 |
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| 3UTR CAA 72 bp | AAACATGTTTCCAGGCCTCAATTAGCTGCAGCAACCTaGTTAACTTTCTGGACACATGGAAGAGACACCACA | + |
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Preference number: 4 (lower is better) Translates to: KHVSRPQLAAAT*LTFWTHGRDTT Trigger: TGTGGTGTCTCTTCCATGTGTCCAGAAAGTTAACAAGGTTGCTGCAGCTAATTGAGGCCTGGAAACATGTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086694.11 ENSMUST00000166100.2 |
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| CDS-3UTR TCA 90 bp | GAAGGTCTGATTTTCTCTAGCTTGCTTCACACAGGGCACAGATGCATGCTAAATGAAAATGTTCTTGTCTaGTTCTCTGAGCTGCCTGTA | + |
|
Preference number: 4 (lower is better) Translates to: EGLIFSSLLHTGHRCMLNENVLV*FSELPV Trigger: TACAGGCAGCTCAGAGAATCAGACAAGAACATTTTC...ATTTAGCATGCATCTGTGCCCTGTGTGAAGCAAGCTAGAGAAAATCAGACCTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000086694.11 ENSMUST00000166100.2 |
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| CDS-3UTR TCA 90 bp | AGAATGAAGGAAGAGAAACATGTTTCCAGGCCTCAATTAGCTGCAGCAACCTTGGAAAATGTTCTTGTCTaGTTCTCTGAGCTGCCTGTA | + |
|
Preference number: 4 (lower is better) Translates to: RMKEEKHVSRPQLAAATLENVLV*FSELPV Trigger: TACAGGCAGCTCAGAGAATCAGACAAGAACATTTTC...CAAGGTTGCTGCAGCTAATTGAGGCCTGGAAACATGTTTCTCTTCCTTCATTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086694.11 ENSMUST00000166100.2 |
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| CDS-3UTR TCA 90 bp | AGAATGAAGGAAGAGAAACATGTTTCCAGGCCTCAATTAGCTGCAGCAACCTTGGATTCCATTGCCCTTTaGAATACACTGCATTCACCA | + |
|
Preference number: 4 (lower is better) Translates to: RMKEEKHVSRPQLAAATLDSIAL*NTLHSP Trigger: TGGTGAATGCAGTGTATTTCAAAGGGCAATGGAATC...CAAGGTTGCTGCAGCTAATTGAGGCCTGGAAACATGTTTCTCTTCCTTCATTCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086694.11 ENSMUST00000166100.2 |
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| CDS-3UTR TCA 90 bp | GAAGGTCTGATTTTCTCTAGCTTGCTTCACACAGGGCACAGATGCATGCTAAATGATTCCATTGCCCTTTaGAATACACTGCATTCACCA | + |
|
Preference number: 4 (lower is better) Translates to: EGLIFSSLLHTGHRCMLNDSIAL*NTLHSP Trigger: TGGTGAATGCAGTGTATTTCAAAGGGCAATGGAATC...ATTTAGCATGCATCTGTGCCCTGTGTGAAGCAAGCTAGAGAAAATCAGACCTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086694.11 ENSMUST00000166100.2 |
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| CDS-3UTR GCA 90 bp | AGAATGAAGGAAGAGAAACATGTTTCCAGGCCTCAATTAGCTGCAGCAACCTTGAAATGGGAAACCCTTTaGTCCATAGATACTGTTGGC | + |
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Preference number: 4 (lower is better) Translates to: RMKEEKHVSRPQLAAATLKWETL*SIDTVG Trigger: GCCAACAGTATCTATGGAGCAAAGGGTTTCCCATTT...CAAGGTTGCTGCAGCTAATTGAGGCCTGGAAACATGTTTCTCTTCCTTCATTCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086694.11 ENSMUST00000166100.2 |
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| CDS-3UTR GCA 90 bp | AGAATGAAGGAAGAGAAACATGTTTCCAGGCCTCAATTAGCTGCAGCAACCTTGTGCCAAAGAAGAGGATaGTGTTGGTCATTCTGTGAA | + |
|
Preference number: 4 (lower is better) Translates to: RMKEEKHVSRPQLAAATLCQRRG*CWSFCE Trigger: TTCACAGAATGACCAACAGCATCCTCTTCTTTGGCA...CAAGGTTGCTGCAGCTAATTGAGGCCTGGAAACATGTTTCTCTTCCTTCATTCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086694.11 ENSMUST00000166100.2 |
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| CDS-3UTR GCA 90 bp | GAAGGTCTGATTTTCTCTAGCTTGCTTCACACAGGGCACAGATGCATGCTAAATTGCCAAAGAAGAGGATaGTGTTGGTCATTCTGTGAA | + |
|
Preference number: 4 (lower is better) Translates to: EGLIFSSLLHTGHRCMLNCQRRG*CWSFCE Trigger: TTCACAGAATGACCAACAGCATCCTCTTCTTTGGCA...ATTTAGCATGCATCTGTGCCCTGTGTGAAGCAAGCTAGAGAAAATCAGACCTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086694.11 ENSMUST00000166100.2 |
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| CDS-3UTR CCA 90 bp | GAAGGTCTGATTTTCTCTAGCTTGCTTCACACAGGGCACAGATGCATGCTAAATTGTTCCAATGGAACTTaGAGGTCATACTTCTCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: EGLIFSSLLHTGHRCMLNCSNGT*RSYFSS Trigger: GGAAGAGAAGTATGACCTCCAAGTTCCATTGGAACA...ATTTAGCATGCATCTGTGCCCTGTGTGAAGCAAGCTAGAGAAAATCAGACCTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086694.11 ENSMUST00000166100.2 |
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| CDS-3UTR CCA 90 bp | AGAATGAAGGAAGAGAAACATGTTTCCAGGCCTCAATTAGCTGCAGCAACCTTGTGTTCCAATGGAACTTaGAGGTCATACTTCTCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: RMKEEKHVSRPQLAAATLCSNGT*RSYFSS Trigger: GGAAGAGAAGTATGACCTCCAAGTTCCATTGGAACA...CAAGGTTGCTGCAGCTAATTGAGGCCTGGAAACATGTTTCTCTTCCTTCATTCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086694.11 ENSMUST00000166100.2 |
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| CDS-3UTR TCA 90 bp | GAAGGTCTGATTTTCTCTAGCTTGCTTCACACAGGGCACAGATGCATGCTAAATACTTCTCTTCCACTTTaGACCGAGGCAAAGATAAAT | + |
|
Preference number: 4 (lower is better) Translates to: EGLIFSSLLHTGHRCMLNTSLPL*TEAKIN Trigger: ATTTATCTTTGCCTCGGTTCAAAGTGGAAGAGAAGT...ATTTAGCATGCATCTGTGCCCTGTGTGAAGCAAGCTAGAGAAAATCAGACCTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086694.11 ENSMUST00000166100.2 |
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| CDS-3UTR GCA 90 bp | AGAATGAAGGAAGAGAAACATGTTTCCAGGCCTCAATTAGCTGCAGCAACCTTGCCTGTACATTTCAACTaGGAATTTAACATCAGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: RMKEEKHVSRPQLAAATLPVHFN*EFNISC Trigger: GCAGCTGATGTTAAATTCGCAGTTGAAATGTACAGG...CAAGGTTGCTGCAGCTAATTGAGGCCTGGAAACATGTTTCTCTTCCTTCATTCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086694.11 ENSMUST00000166100.2 |
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| CDS-3UTR GCA 90 bp | GAAGGTCTGATTTTCTCTAGCTTGCTTCACACAGGGCACAGATGCATGCTAAATCCTGTACATTTCAACTaGGAATTTAACATCAGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: EGLIFSSLLHTGHRCMLNPVHFN*EFNISC Trigger: GCAGCTGATGTTAAATTCGCAGTTGAAATGTACAGG...ATTTAGCATGCATCTGTGCCCTGTGTGAAGCAAGCTAGAGAAAATCAGACCTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086694.11 ENSMUST00000166100.2 |
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| CDS-3UTR CCA 90 bp | GAAGGTCTGATTTTCTCTAGCTTGCTTCACACAGGGCACAGATGCATGCTAAATAAATGTCTGGAGAAATaGGAAACCCTTTGCTCCATA | + |
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Preference number: 4 (lower is better) Translates to: EGLIFSSLLHTGHRCMLNKCLEK*ETLCSI Trigger: TATGGAGCAAAGGGTTTCCCATTTCTCCAGACATTT...ATTTAGCATGCATCTGTGCCCTGTGTGAAGCAAGCTAGAGAAAATCAGACCTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086694.11 ENSMUST00000166100.2 |
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| CDS-3UTR CCA 90 bp | AGAATGAAGGAAGAGAAACATGTTTCCAGGCCTCAATTAGCTGCAGCAACCTTGAAATGTCTGGAGAAATaGGAAACCCTTTGCTCCATA | + |
|
Preference number: 4 (lower is better) Translates to: RMKEEKHVSRPQLAAATLKCLEK*ETLCSI Trigger: TATGGAGCAAAGGGTTTCCCATTTCTCCAGACATTT...CAAGGTTGCTGCAGCTAATTGAGGCCTGGAAACATGTTTCTCTTCCTTCATTCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086694.11 ENSMUST00000166100.2 |
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| CDS-3UTR CCA 90 bp | GAAGGTCTGATTTTCTCTAGCTTGCTTCACACAGGGCACAGATGCATGCTAAATACCATCAATTTCCATTaGCAGCAGGACAAACATACT | + |
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Preference number: 4 (lower is better) Translates to: EGLIFSSLLHTGHRCMLNTINFH*QQDKHT Trigger: AGTATGTTTGTCCTGCTGCCAATGGAAATTGATGGT...ATTTAGCATGCATCTGTGCCCTGTGTGAAGCAAGCTAGAGAAAATCAGACCTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086694.11 ENSMUST00000166100.2 |
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| CDS-3UTR TCA 90 bp | GAAGGTCTGATTTTCTCTAGCTTGCTTCACACAGGGCACAGATGCATGCTAAATCTGTTGGTCATTCTGTaGATGATGAAGAATAGGAAT | + |
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Preference number: 4 (lower is better) Translates to: EGLIFSSLLHTGHRCMLNLLVIL*MMKNRN Trigger: ATTCCTATTCTTCATCATTCACAGAATGACCAACAG...ATTTAGCATGCATCTGTGCCCTGTGTGAAGCAAGCTAGAGAAAATCAGACCTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086694.11 ENSMUST00000166100.2 |
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| CDS-3UTR GCA 90 bp | AGAATGAAGGAAGAGAAACATGTTTCCAGGCCTCAATTAGCTGCAGCAACCTTGAATTTGCGATTCCATTaGCCTTTGAAATACACTGCA | + |
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Preference number: 4 (lower is better) Translates to: RMKEEKHVSRPQLAAATLNLRFH*PLKYTA Trigger: TGCAGTGTATTTCAAAGGGCAATGGAATCGCAAATT...CAAGGTTGCTGCAGCTAATTGAGGCCTGGAAACATGTTTCTCTTCCTTCATTCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086694.11 ENSMUST00000166100.2 |
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| CDS CCA 90 bp | CACAAGACCTGGAATGCTGCTCATGCCAGAGAAGTCAGCCTTCTGTaGATCAAAGGCGTCGACCATCCCCATGTGTTCCAATGGAACTTG | + |
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Preference number: 5 (lower is better) Translates to: HKTWNAAHAREVSLL*IKGVDHPHVFQWNL Trigger: CAAGTTCCATTGGAACACATGGGGATGGTCGACGCCTTTGATCCACAGAAGGCTGACTTCTCTGGCATGAGCAGCATTCCAGGTCTTGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086694.11 ENSMUST00000166100.2 |
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| CDS-3UTR CAA 90 bp | AGAATGAAGGAAGAGAAACATGTTTCCAGGCCTCAATTAGCTGCAGCAACCTTGCTCCAAGCTGGAGCATaGCTAATGCTGTCATCATGC | + |
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Preference number: 5 (lower is better) Translates to: RMKEEKHVSRPQLAAATLLQAGA*LMLSSC Trigger: GCATGATGACAGCATTAGCAATGCTCCAGCTTGGAG...CAAGGTTGCTGCAGCTAATTGAGGCCTGGAAACATGTTTCTCTTCCTTCATTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086694.11 ENSMUST00000166100.2 |
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| CDS-3UTR CAA 90 bp | GAAGGTCTGATTTTCTCTAGCTTGCTTCACACAGGGCACAGATGCATGCTAAATCTCCAAGCTGGAGCATaGCTAATGCTGTCATCATGC | + |
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Preference number: 5 (lower is better) Translates to: EGLIFSSLLHTGHRCMLNLQAGA*LMLSSC Trigger: GCATGATGACAGCATTAGCAATGCTCCAGCTTGGAG...ATTTAGCATGCATCTGTGCCCTGTGTGAAGCAAGCTAGAGAAAATCAGACCTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086694.11 ENSMUST00000166100.2 |
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| CDS-3UTR CAA 90 bp | AGAATGAAGGAAGAGAAACATGTTTCCAGGCCTCAATTAGCTGCAGCAACCTTGATTTCAGTGTTTCCTTaGGCTCCAAGCTGGAGCATT | + |
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Preference number: 5 (lower is better) Translates to: RMKEEKHVSRPQLAAATLISVFP*APSWSI Trigger: AATGCTCCAGCTTGGAGCCAAAGGAAACACTGAAAT...CAAGGTTGCTGCAGCTAATTGAGGCCTGGAAACATGTTTCTCTTCCTTCATTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086694.11 ENSMUST00000166100.2 |
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| CDS-3UTR CAA 90 bp | AGAATGAAGGAAGAGAAACATGTTTCCAGGCCTCAATTAGCTGCAGCAACCTTGCGATTCCATTGCCCTTaGAAATACACTGCATTCACC | + |
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Preference number: 5 (lower is better) Translates to: RMKEEKHVSRPQLAAATLRFHCP*KYTAFT Trigger: GGTGAATGCAGTGTATTTCAAAGGGCAATGGAATCG...CAAGGTTGCTGCAGCTAATTGAGGCCTGGAAACATGTTTCTCTTCCTTCATTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086694.11 ENSMUST00000166100.2 |
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| CDS-3UTR CAA 90 bp | AGAATGAAGGAAGAGAAACATGTTTCCAGGCCTCAATTAGCTGCAGCAACCTTGGACCATCAATTTCCATaGGCAGCAGGACAAACATAC | + |
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Preference number: 5 (lower is better) Translates to: RMKEEKHVSRPQLAAATLDHQFP*AAGQTY Trigger: GTATGTTTGTCCTGCTGCCAATGGAAATTGATGGTC...CAAGGTTGCTGCAGCTAATTGAGGCCTGGAAACATGTTTCTCTTCCTTCATTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086694.11 ENSMUST00000166100.2 |
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| CDS-3UTR CAA 90 bp | GAAGGTCTGATTTTCTCTAGCTTGCTTCACACAGGGCACAGATGCATGCTAAATGACCATCAATTTCCATaGGCAGCAGGACAAACATAC | + |
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Preference number: 5 (lower is better) Translates to: EGLIFSSLLHTGHRCMLNDHQFP*AAGQTY Trigger: GTATGTTTGTCCTGCTGCCAATGGAAATTGATGGTC...ATTTAGCATGCATCTGTGCCCTGTGTGAAGCAAGCTAGAGAAAATCAGACCTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086694.11 ENSMUST00000166100.2 |
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| CDS-3UTR CAA 90 bp | AGAATGAAGGAAGAGAAACATGTTTCCAGGCCTCAATTAGCTGCAGCAACCTTGTCTGGACAGGTTTACTaGTGTTCTTGTTCAGCCAAA | + |
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Preference number: 5 (lower is better) Translates to: RMKEEKHVSRPQLAAATLSGQVY*CSCSAK Trigger: TTTGGCTGAACAAGAACACAAGTAAACCTGTCCAGA...CAAGGTTGCTGCAGCTAATTGAGGCCTGGAAACATGTTTCTCTTCCTTCATTCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086694.11 ENSMUST00000166100.2 |
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| CDS-3UTR CAA 90 bp | GAAGGTCTGATTTTCTCTAGCTTGCTTCACACAGGGCACAGATGCATGCTAAATTCTGGACAGGTTTACTaGTGTTCTTGTTCAGCCAAA | + |
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Preference number: 5 (lower is better) Translates to: EGLIFSSLLHTGHRCMLNSGQVY*CSCSAK Trigger: TTTGGCTGAACAAGAACACAAGTAAACCTGTCCAGA...ATTTAGCATGCATCTGTGCCCTGTGTGAAGCAAGCTAGAGAAAATCAGACCTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086694.11 ENSMUST00000166100.2 |
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| CDS-3UTR CAA 90 bp | GAAGGTCTGATTTTCTCTAGCTTGCTTCACACAGGGCACAGATGCATGCTAAATACCTCCACAAAGGACTaGTGTAAAACTTTAGACACC | + |
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Preference number: 5 (lower is better) Translates to: EGLIFSSLLHTGHRCMLNTSTKD*CKTLDT Trigger: GGTGTCTAAAGTTTTACACAAGTCCTTTGTGGAGGT...ATTTAGCATGCATCTGTGCCCTGTGTGAAGCAAGCTAGAGAAAATCAGACCTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000086694.11 ENSMUST00000166100.2 |
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| CDS-3UTR CAA 90 bp | AGAATGAAGGAAGAGAAACATGTTTCCAGGCCTCAATTAGCTGCAGCAACCTTGACCTCCACAAAGGACTaGTGTAAAACTTTAGACACC | + |
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Preference number: 5 (lower is better) Translates to: RMKEEKHVSRPQLAAATLTSTKD*CKTLDT Trigger: GGTGTCTAAAGTTTTACACAAGTCCTTTGTGGAGGT...CAAGGTTGCTGCAGCTAATTGAGGCCTGGAAACATGTTTCTCTTCCTTCATTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086694.11 ENSMUST00000166100.2 |
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| CDS-3UTR CAA 90 bp | GAAGGTCTGATTTTCTCTAGCTTGCTTCACACAGGGCACAGATGCATGCTAAATTACTTCTCTTCCACTTaGAACCGAGGCAAAGATAAA | + |
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Preference number: 5 (lower is better) Translates to: EGLIFSSLLHTGHRCMLNYFSST*NRGKDK Trigger: TTTATCTTTGCCTCGGTTCAAAGTGGAAGAGAAGTA...ATTTAGCATGCATCTGTGCCCTGTGTGAAGCAAGCTAGAGAAAATCAGACCTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086694.11 ENSMUST00000166100.2 |
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| CDS-3UTR CAA 90 bp | AGAATGAAGGAAGAGAAACATGTTTCCAGGCCTCAATTAGCTGCAGCAACCTTGTACTTCTCTTCCACTTaGAACCGAGGCAAAGATAAA | + |
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Preference number: 5 (lower is better) Translates to: RMKEEKHVSRPQLAAATLYFSST*NRGKDK Trigger: TTTATCTTTGCCTCGGTTCAAAGTGGAAGAGAAGTA...CAAGGTTGCTGCAGCTAATTGAGGCCTGGAAACATGTTTCTCTTCCTTCATTCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086694.11 ENSMUST00000166100.2 |
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| CDS-3UTR CAA 90 bp | AGAATGAAGGAAGAGAAACATGTTTCCAGGCCTCAATTAGCTGCAGCAACCTTGGGTGGTTTCAATGAATaGAAGAACCTTCTCAATTTG | + |
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Preference number: 5 (lower is better) Translates to: RMKEEKHVSRPQLAAATLGGFNE*KNLLNL Trigger: CAAATTGAGAAGGTTCTTCAATTCATTGAAACCACC...CAAGGTTGCTGCAGCTAATTGAGGCCTGGAAACATGTTTCTCTTCCTTCATTCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086694.11 ENSMUST00000166100.2 |
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| CDS-3UTR CAA 90 bp | GAAGGTCTGATTTTCTCTAGCTTGCTTCACACAGGGCACAGATGCATGCTAAATTGGTTTTCATTAAATTaGCGATTCCATTGCCCTTTG | + |
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Preference number: 5 (lower is better) Translates to: EGLIFSSLLHTGHRCMLNWFSLN*RFHCPL Trigger: CAAAGGGCAATGGAATCGCAAATTTAATGAAAACCA...ATTTAGCATGCATCTGTGCCCTGTGTGAAGCAAGCTAGAGAAAATCAGACCTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000086694.11 ENSMUST00000166100.2 |
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| CDS-3UTR CAA 90 bp | AGAATGAAGGAAGAGAAACATGTTTCCAGGCCTCAATTAGCTGCAGCAACCTTGGGTTTACTTGTGTTCTaGTTCAGCCAAAACTTTTCT | + |
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Preference number: 5 (lower is better) Translates to: RMKEEKHVSRPQLAAATLGLLVF*FSQNFS Trigger: AGAAAAGTTTTGGCTGAACAAGAACACAAGTAAACC...CAAGGTTGCTGCAGCTAATTGAGGCCTGGAAACATGTTTCTCTTCCTTCATTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000086694.11 ENSMUST00000166100.2 |
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| CDS TCA 72 bp | AACAGAAATCTTCTGCTATCTGTGCTGATCTTACACTaGCTTCCACTCCTGTGGCAGCAGCAGCTTCTGTTC | + |
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Preference number: 6 (lower is better) Translates to: NRNLLLSVLILH*LPLLWQQQLLF Trigger: GAACAGAAGCTGCTGCTGCCACAGGAGTGGAAGTCAGTGTAAGATCAGCACAGATAGCAGAAGATTTCTGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086694.11 ENSMUST00000166100.2 |
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| CDS TCA 72 bp | TGGATGATCACAACAGAAATCTTCTGCTATCTGTGCTaGTCTTACACTGACTTCCACTCCTGTGGCAGCAGC | + |
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Preference number: 6 (lower is better) Translates to: WMITTEIFCYLC*SYTDFHSCGSS Trigger: GCTGCTGCCACAGGAGTGGAAGTCAGTGTAAGATCAGCACAGATAGCAGAAGATTTCTGTTGTGATCATCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086694.11 ENSMUST00000166100.2 |
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| CDS CCA 72 bp | TGGATCAAAGGCGTCGACCATCCCCATGTGTTCCAATaGAACTTGGAGGTCATACTTCTCTTCCACTTTGAA | + |
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Preference number: 6 (lower is better) Translates to: WIKGVDHPHVFQ*NLEVILLFHFE Trigger: TTCAAAGTGGAAGAGAAGTATGACCTCCAAGTTCCATTGGAACACATGGGGATGGTCGACGCCTTTGATCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086694.11 ENSMUST00000166100.2 |
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| CDS CAA 72 bp | TGTCTTCCAAAAATGTCTGGAGAAATGGGAAACCCTTaGCTCCATAGATACTGTTGGCAGCCTTCAGGTCAT | + |
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Preference number: 6 (lower is better) Translates to: CLPKMSGEMGNP*LHRYCWQPSGH Trigger: ATGACCTGAAGGCTGCCAACAGTATCTATGGAGCAAAGGGTTTCCCATTTCTCCAGACATTTTTGGAAGACA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000086694.11 ENSMUST00000166100.2 |
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| CDS CCA 72 bp | GGAGAAATGGGAAACCCTTTGCTCCATAGATACTGTTaGCAGCCTTCAGGTCATAATCATCATTGGATTTGT | + |
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Preference number: 6 (lower is better) Translates to: GEMGNPLLHRYC*QPSGHNHHWIC Trigger: ACAAATCCAATGATGATTATGACCTGAAGGCTGCCAACAGTATCTATGGAGCAAAGGGTTTCCCATTTCTCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086694.11 ENSMUST00000166100.2 |
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| CDS CAA 72 bp | CTTGGTGGTTTCAATGAATTGAAGAACCTTCTCAATTaGTATTTCAGTGTTTCCTTTGGCTCCAAGCTGGAG | + |
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Preference number: 6 (lower is better) Translates to: LGGFNELKNLLN*YFSVSFGSKLE Trigger: CTCCAGCTTGGAGCCAAAGGAAACACTGAAATACAAATTGAGAAGGTTCTTCAATTCATTGAAACCACCAAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086694.11 ENSMUST00000166100.2 |
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| CDS CAA 72 bp | CACATCCCCCAGAAAGCTGAAGTTAAATTTGTTTCGTaGTTTCATCATCTGGACAGGTTTACTTGTGTTCTT | + |
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Preference number: 6 (lower is better) Translates to: HIPQKAEVKFVS*FHHLDRFTCVL Trigger: AAGAACACAAGTAAACCTGTCCAGATGATGAAACAACGAAACAAATTTAACTTCAGCTTTCTGGGGGATGTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000086694.11 ENSMUST00000166100.2 |
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| CDS CAA 72 bp | CGTTGTTTCATCATCTGGACAGGTTTACTTGTGTTCTaGTTCAGCCAAAACTTTTCTTCTCTTGTATGGTTT | + |
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Preference number: 6 (lower is better) Translates to: RCFIIWTGLLVF*FSQNFSSLVWF Trigger: AAACCATACAAGAGAAGAAAAGTTTTGGCTGAACAAGAACACAAGTAAACCTGTCCAGATGATGAAACAACG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000086694.11 ENSMUST00000166100.2 |
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| CDS CAA 90 bp | AACTCAGTCAAATGCATGTTTTCTGCTTTTATCCACTCTAGTAATTaGTCAGTAGTGAGTTGTTCTTCAAGCTGCTTCAGACCATCAATT | + |
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Preference number: 6 (lower is better) Translates to: NSVKCMFSAFIHSSN*SVVSCSSSCFRPSI Trigger: AATTGATGGTCTGAAGCAGCTTGAAGAACAACTCACTACTGACAAATTACTAGAGTGGATAAAAGCAGAAAACATGCATTTGACTGAGTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000086694.11 ENSMUST00000166100.2 |
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| CDS CAA 72 bp | AAATGCATGTTTTCTGCTTTTATCCACTCTAGTAATTaGTCAGTAGTGAGTTGTTCTTCAAGCTGCTTCAGA | + |
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Preference number: 6 (lower is better) Translates to: KCMFSAFIHSSN*SVVSCSSSCFR Trigger: TCTGAAGCAGCTTGAAGAACAACTCACTACTGACAAATTACTAGAGTGGATAAAAGCAGAAAACATGCATTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000086694.11 ENSMUST00000166100.2 |
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