Pregenerated sensors for SERPINB3A (Mus musculus)
Ensembl gene IDs: ENSMUSG00000044594Ensembl transcript IDs: ENSMUST00000027567.14, ENSMUST00000112717.3
Found 50 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AAAAAGAATGCAGGAAGAGAAACATGTTTCCAGGCCTCAATTAGCTaGAGCAACCTTGTTAACTTTTCTGGACACATGGAAGAGACACCA | + |
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Preference number: 1 (lower is better) Translates to: KKNAGRETCFQASIS*SNLVNFSGHMEETP Trigger: TGGTGTCTCTTCCATGTGTCCAGAAAAGTTAACAAGGTTGCTGCAGCTAATTGAGGCCTGGAAACATGTTTCTCTTCCTGCATTCTTTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027567.14 ENSMUST00000112717.3 |
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| CDS-3UTR TCA 90 bp | GAAACATGTTTCCAGGCCTCAATTAGCTGCAGCAACCTTGTTAACTTTTCTGGAGACACCACAAGACCTTaGGTGCTGCTCATACCAGAG | + |
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Preference number: 4 (lower is better) Translates to: ETCFQASISCSNLVNFSGDTTRP*VLLIPE Trigger: CTCTGGTATGAGCAGCACTCAAGGTCTTGTGGTGTC...TCCAGAAAAGTTAACAAGGTTGCTGCAGCTAATTGAGGCCTGGAAACATGTTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027567.14 ENSMUST00000112717.3 |
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| CDS-3UTR GCA 90 bp | AAACATGTTTCCAGGCCTCAATTAGCTGCAGCAACCTTGTTAACTTTTCTGGACGACTTCCACACCTGTTaGAGCAGCAGCTTCTGTTCC | + |
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Preference number: 4 (lower is better) Translates to: KHVSRPQLAAATLLTFLDDFHTC*SSSFCS Trigger: GGAACAGAAGCTGCTGCTGCAACAGGTGTGGAAGTC...GTCCAGAAAAGTTAACAAGGTTGCTGCAGCTAATTGAGGCCTGGAAACATGTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027567.14 ENSMUST00000112717.3 |
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| CDS-3UTR GCA 90 bp | GAAACATGTTTCCAGGCCTCAATTAGCTGCAGCAACCTTGTTAACTTTTCTGGAGACTTCCACACCTGTTaGAGCAGCAGCTTCTGTTCC | + |
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Preference number: 4 (lower is better) Translates to: ETCFQASISCSNLVNFSGDFHTC*SSSFCS Trigger: GGAACAGAAGCTGCTGCTGCAACAGGTGTGGAAGTC...TCCAGAAAAGTTAACAAGGTTGCTGCAGCTAATTGAGGCCTGGAAACATGTTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027567.14 ENSMUST00000112717.3 |
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| CDS-3UTR GCA 90 bp | GAAACATGTTTCCAGGCCTCAATTAGCTGCAGCAACCTTGTTAACTTTTCTGGATCCACAATCTTGGCCTaGACATCCTCCAGAAACATG | + |
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Preference number: 4 (lower is better) Translates to: ETCFQASISCSNLVNFSGSTILA*TSSRNM Trigger: CATGTTTCTGGAGGATGTGCAGGCCAAGATTGTGGA...TCCAGAAAAGTTAACAAGGTTGCTGCAGCTAATTGAGGCCTGGAAACATGTTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027567.14 ENSMUST00000112717.3 |
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| CDS-3UTR GCA 90 bp | GAAACATGTTTCCAGGCCTCAATTAGCTGCAGCAACCTTGTTAACTTTTCTGGACCACAAGACCTTGAGTaGTGCTCATACCAGAGAAGT | + |
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Preference number: 4 (lower is better) Translates to: ETCFQASISCSNLVNFSGPQDLE*CSYQRS Trigger: ACTTCTCTGGTATGAGCAGCACTCAAGGTCTTGTGG...TCCAGAAAAGTTAACAAGGTTGCTGCAGCTAATTGAGGCCTGGAAACATGTTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027567.14 ENSMUST00000112717.3 |
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| 3UTR CAA 72 bp | AAACATGTTTCCAGGCCTCAATTAGCTGCAGCAACCTaGTTAACTTTTCTGGACACATGGAAGAGACACCAC | + |
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Preference number: 4 (lower is better) Translates to: KHVSRPQLAAAT*LTFLDTWKRHH Trigger: GTGGTGTCTCTTCCATGTGTCCAGAAAAGTTAACAAGGTTGCTGCAGCTAATTGAGGCCTGGAAACATGTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027567.14 ENSMUST00000112717.3 |
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| CDS-3UTR TCA 90 bp | AAACATGTTTCCAGGCCTCAATTAGCTGCAGCAACCTTGTTAACTTTTCTGGACGGTTCCATTGTCCTTTaGAATACACTGCATTCACCA | + |
|
Preference number: 4 (lower is better) Translates to: KHVSRPQLAAATLLTFLDGSIVL*NTLHSP Trigger: TGGTGAATGCAGTGTATTTCAAAGGACAATGGAACC...GTCCAGAAAAGTTAACAAGGTTGCTGCAGCTAATTGAGGCCTGGAAACATGTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027567.14 ENSMUST00000112717.3 |
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| CDS-3UTR TCA 90 bp | GAAACATGTTTCCAGGCCTCAATTAGCTGCAGCAACCTTGTTAACTTTTCTGGAGGTTCCATTGTCCTTTaGAATACACTGCATTCACCA | + |
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Preference number: 4 (lower is better) Translates to: ETCFQASISCSNLVNFSGGSIVL*NTLHSP Trigger: TGGTGAATGCAGTGTATTTCAAAGGACAATGGAACC...TCCAGAAAAGTTAACAAGGTTGCTGCAGCTAATTGAGGCCTGGAAACATGTTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027567.14 ENSMUST00000112717.3 |
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| CDS-3UTR CCA 90 bp | GAAACATGTTTCCAGGCCTCAATTAGCTGCAGCAACCTTGTTAACTTTTCTGGAGTGTTCCAATGGAATTaGGAGGTCATACTTCTCATC | + |
|
Preference number: 4 (lower is better) Translates to: ETCFQASISCSNLVNFSGVFQWN*EVILLI Trigger: GATGAGAAGTATGACCTCCCAATTCCATTGGAACAC...TCCAGAAAAGTTAACAAGGTTGCTGCAGCTAATTGAGGCCTGGAAACATGTTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027567.14 ENSMUST00000112717.3 |
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| CDS-3UTR CCA 90 bp | AAACATGTTTCCAGGCCTCAATTAGCTGCAGCAACCTTGTTAACTTTTCTGGACTCCCATGTGTTCCAATaGAATTGGGAGGTCATACTT | + |
|
Preference number: 4 (lower is better) Translates to: KHVSRPQLAAATLLTFLDSHVFQ*NWEVIL Trigger: AAGTATGACCTCCCAATTCCATTGGAACACATGGGA...GTCCAGAAAAGTTAACAAGGTTGCTGCAGCTAATTGAGGCCTGGAAACATGTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027567.14 ENSMUST00000112717.3 |
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| CDS-3UTR TCA 90 bp | AAACATGTTTCCAGGCCTCAATTAGCTGCAGCAACCTTGTTAACTTTTCTGGACGAAAATGTTGTTATCTaGTTCTCTGAGCTGCCTGTA | + |
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Preference number: 4 (lower is better) Translates to: KHVSRPQLAAATLLTFLDENVVI*FSELPV Trigger: TACAGGCAGCTCAGAGAATCAGATAACAACATTTTC...GTCCAGAAAAGTTAACAAGGTTGCTGCAGCTAATTGAGGCCTGGAAACATGTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027567.14 ENSMUST00000112717.3 |
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| CDS-3UTR GCA 90 bp | GAAACATGTTTCCAGGCCTCAATTAGCTGCAGCAACCTTGTTAACTTTTCTGGAAGTTGTTCTTCAAGCTaGTTCAGACCATTGATTTCC | + |
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Preference number: 4 (lower is better) Translates to: ETCFQASISCSNLVNFSGSCSSS*FRPLIS Trigger: GGAAATCAATGGTCTGAAGCAGCTTGAAGAACAACT...TCCAGAAAAGTTAACAAGGTTGCTGCAGCTAATTGAGGCCTGGAAACATGTTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027567.14 ENSMUST00000112717.3 |
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| CDS-3UTR GCA 90 bp | GAAACATGTTTCCAGGCCTCAATTAGCTGCAGCAACCTTGTTAACTTTTCTGGATGCCAAAGAAGAGGATaGTGTTGGTTTTTCTGTGAA | + |
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Preference number: 4 (lower is better) Translates to: ETCFQASISCSNLVNFSGCQRRG*CWFFCE Trigger: TTCACAGAAAAACCAACAGCATCCTCTTCTTTGGCA...TCCAGAAAAGTTAACAAGGTTGCTGCAGCTAATTGAGGCCTGGAAACATGTTTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027567.14 ENSMUST00000112717.3 |
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| CDS-3UTR CCA 90 bp | AAACATGTTTCCAGGCCTCAATTAGCTGCAGCAACCTTGTTAACTTTTCTGGACCTCCATAGATACTGTTaGCAGCCTTTAGATCATAAG | + |
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Preference number: 4 (lower is better) Translates to: KHVSRPQLAAATLLTFLDLHRYC*QPLDHK Trigger: CTTATGATCTAAAGGCTGCCAACAGTATCTATGGAG...GTCCAGAAAAGTTAACAAGGTTGCTGCAGCTAATTGAGGCCTGGAAACATGTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027567.14 ENSMUST00000112717.3 |
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| CDS-3UTR CCA 90 bp | GAAACATGTTTCCAGGCCTCAATTAGCTGCAGCAACCTTGTTAACTTTTCTGGAAAATGTCTGGACAAATaGGAAACCCTTTGCTCCATA | + |
|
Preference number: 4 (lower is better) Translates to: ETCFQASISCSNLVNFSGKCLDK*ETLCSI Trigger: TATGGAGCAAAGGGTTTCCCATTTGTCCAGACATTT...TCCAGAAAAGTTAACAAGGTTGCTGCAGCTAATTGAGGCCTGGAAACATGTTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027567.14 ENSMUST00000112717.3 |
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| CDS-3UTR CCA 90 bp | GAAACATGTTTCCAGGCCTCAATTAGCTGCAGCAACCTTGTTAACTTTTCTGGAACCATTGATTTCCACTaGCAACAGGACAATCATACT | + |
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Preference number: 4 (lower is better) Translates to: ETCFQASISCSNLVNFSGTIDFH*QQDNHT Trigger: AGTATGATTGTCCTGTTGCCAGTGGAAATCAATGGT...TCCAGAAAAGTTAACAAGGTTGCTGCAGCTAATTGAGGCCTGGAAACATGTTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027567.14 ENSMUST00000112717.3 |
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| CDS-3UTR TCA 90 bp | AAACATGTTTCCAGGCCTCAATTAGCTGCAGCAACCTTGTTAACTTTTCTGGACTCTTGGTGGTTTCATTaGATTGAAGAACCTTCTCAA | + |
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Preference number: 4 (lower is better) Translates to: KHVSRPQLAAATLLTFLDSWWFH*IEEPSQ Trigger: TTGAGAAGGTTCTTCAATTCAATGAAACCACCAAGA...GTCCAGAAAAGTTAACAAGGTTGCTGCAGCTAATTGAGGCCTGGAAACATGTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027567.14 ENSMUST00000112717.3 |
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| CDS-3UTR TCA 90 bp | GAAACATGTTTCCAGGCCTCAATTAGCTGCAGCAACCTTGTTAACTTTTCTGGATCTTGGTGGTTTCATTaGATTGAAGAACCTTCTCAA | + |
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Preference number: 4 (lower is better) Translates to: ETCFQASISCSNLVNFSGSWWFH*IEEPSQ Trigger: TTGAGAAGGTTCTTCAATTCAATGAAACCACCAAGA...TCCAGAAAAGTTAACAAGGTTGCTGCAGCTAATTGAGGCCTGGAAACATGTTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027567.14 ENSMUST00000112717.3 |
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| CDS-3UTR GCA 90 bp | AAACATGTTTCCAGGCCTCAATTAGCTGCAGCAACCTTGTTAACTTTTCTGGACTTCATCATGGCAGTGTaGAGATTTTTCTGTTGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: KHVSRPQLAAATLLTFLDFIMAV*RFFCCL Trigger: AAGACAACAGAAAAATCTGCACACTGCCATGATGAA...GTCCAGAAAAGTTAACAAGGTTGCTGCAGCTAATTGAGGCCTGGAAACATGTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027567.14 ENSMUST00000112717.3 |
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| CDS-3UTR GCA 90 bp | GAAACATGTTTCCAGGCCTCAATTAGCTGCAGCAACCTTGTTAACTTTTCTGGATTCATCATGGCAGTGTaGAGATTTTTCTGTTGTCTT | + |
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Preference number: 4 (lower is better) Translates to: ETCFQASISCSNLVNFSGFIMAV*RFFCCL Trigger: AAGACAACAGAAAAATCTGCACACTGCCATGATGAA...TCCAGAAAAGTTAACAAGGTTGCTGCAGCTAATTGAGGCCTGGAAACATGTTTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027567.14 ENSMUST00000112717.3 |
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| CDS-3UTR CCA 90 bp | GAAACATGTTTCCAGGCCTCAATTAGCTGCAGCAACCTTGTTAACTTTTCTGGATCTTCCAAAAATGTCTaGACAAATGGGAAACCCTTT | + |
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Preference number: 4 (lower is better) Translates to: ETCFQASISCSNLVNFSGSSKNV*TNGKPF Trigger: AAAGGGTTTCCCATTTGTCCAGACATTTTTGGAAGA...TCCAGAAAAGTTAACAAGGTTGCTGCAGCTAATTGAGGCCTGGAAACATGTTTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027567.14 ENSMUST00000112717.3 |
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| CDS-3UTR CCA 90 bp | AAACATGTTTCCAGGCCTCAATTAGCTGCAGCAACCTTGTTAACTTTTCTGGACACATTTTCTTCATCATaGCAGTGTGCAGATTTTTCT | + |
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Preference number: 4 (lower is better) Translates to: KHVSRPQLAAATLLTFLDTFSSS*QCADFS Trigger: AGAAAAATCTGCACACTGCCATGATGAAGAAAATGT...GTCCAGAAAAGTTAACAAGGTTGCTGCAGCTAATTGAGGCCTGGAAACATGTTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000027567.14 ENSMUST00000112717.3 |
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| CDS-3UTR CCA 90 bp | GAAACATGTTTCCAGGCCTCAATTAGCTGCAGCAACCTTGTTAACTTTTCTGGATTTTGTTTCATCATCTaGACAGGTTTACTTGTGTTC | + |
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Preference number: 4 (lower is better) Translates to: ETCFQASISCSNLVNFSGFCFII*TGLLVF Trigger: GAACACAAGTAAACCTGTCCAGATGATGAAACAAAA...TCCAGAAAAGTTAACAAGGTTGCTGCAGCTAATTGAGGCCTGGAAACATGTTTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027567.14 ENSMUST00000112717.3 |
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| CDS-3UTR CAA 90 bp | GAAACATGTTTCCAGGCCTCAATTAGCTGCAGCAACCTTGTTAACTTTTCTGGAAGACACCACAAGACCTaGAGTGCTGCTCATACCAGA | + |
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Preference number: 5 (lower is better) Translates to: ETCFQASISCSNLVNFSGRHHKT*SAAHTR Trigger: TCTGGTATGAGCAGCACTCAAGGTCTTGTGGTGTCT...TCCAGAAAAGTTAACAAGGTTGCTGCAGCTAATTGAGGCCTGGAAACATGTTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027567.14 ENSMUST00000112717.3 |
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| CDS TCA 90 bp | GATGATCACAACAGAAATCTTCTGCTATCTGTGCTGATGTTAAACTaGCTTCCACACCTGTTGCAGCAGCAGCTTCTGTTCCCTCTTCAT | + |
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Preference number: 5 (lower is better) Translates to: DDHNRNLLLSVLMLN*LPHLLQQQLLFPLH Trigger: ATGAAGAGGGAACAGAAGCTGCTGCTGCAACAGGTGTGGAAGTCAGTTTAACATCAGCACAGATAGCAGAAGATTTCTGTTGTGATCATC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027567.14 ENSMUST00000112717.3 |
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| CDS-3UTR CAA 90 bp | GAAACATGTTTCCAGGCCTCAATTAGCTGCAGCAACCTTGTTAACTTTTCTGGAGTCCACTCCAGTAACTaGTCAGCAGTGAGTTGTTCT | + |
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Preference number: 5 (lower is better) Translates to: ETCFQASISCSNLVNFSGVHSSN*SAVSCS Trigger: AGAACAACTCACTGCTGACAAGTTACTGGAGTGGAC...TCCAGAAAAGTTAACAAGGTTGCTGCAGCTAATTGAGGCCTGGAAACATGTTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027567.14 ENSMUST00000112717.3 |
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| CDS GCA 90 bp | TCATCCACTTTGAACCGAGGCAAAGATAAATACAACTCGGTCATATaGATGTTTTCTGCTCTTGTCCACTCCAGTAACTTGTCAGCAGTG | + |
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Preference number: 5 (lower is better) Translates to: SSTLNRGKDKYNSVI*MFSALVHSSNLSAV Trigger: CACTGCTGACAAGTTACTGGAGTGGACAAGAGCAGAAAACATGCATATGACCGAGTTGTATTTATCTTTGCCTCGGTTCAAAGTGGATGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027567.14 ENSMUST00000112717.3 |
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| CDS-3UTR CAA 90 bp | GAAACATGTTTCCAGGCCTCAATTAGCTGCAGCAACCTTGTTAACTTTTCTGGAGCATGTTTTCTGCTCTaGTCCACTCCAGTAACTTGT | + |
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Preference number: 5 (lower is better) Translates to: ETCFQASISCSNLVNFSGACFLL*STPVTC Trigger: ACAAGTTACTGGAGTGGACAAGAGCAGAAAACATGC...TCCAGAAAAGTTAACAAGGTTGCTGCAGCTAATTGAGGCCTGGAAACATGTTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027567.14 ENSMUST00000112717.3 |
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| CDS-3UTR CAA 90 bp | GAAACATGTTTCCAGGCCTCAATTAGCTGCAGCAACCTTGTTAACTTTTCTGGATGGTTCCATTGTCCTTaGAAATACACTGCATTCACC | + |
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Preference number: 5 (lower is better) Translates to: ETCFQASISCSNLVNFSGWFHCP*KYTAFT Trigger: GGTGAATGCAGTGTATTTCAAAGGACAATGGAACCA...TCCAGAAAAGTTAACAAGGTTGCTGCAGCTAATTGAGGCCTGGAAACATGTTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027567.14 ENSMUST00000112717.3 |
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| CDS-3UTR CAA 90 bp | GAAACATGTTTCCAGGCCTCAATTAGCTGCAGCAACCTTGTTAACTTTTCTGGATGTGTTCCAATGGAATaGGGAGGTCATACTTCTCAT | + |
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Preference number: 5 (lower is better) Translates to: ETCFQASISCSNLVNFSGCVPME*GGHTSH Trigger: ATGAGAAGTATGACCTCCCAATTCCATTGGAACACA...TCCAGAAAAGTTAACAAGGTTGCTGCAGCTAATTGAGGCCTGGAAACATGTTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027567.14 ENSMUST00000112717.3 |
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| CDS-3UTR CAA 90 bp | AAACATGTTTCCAGGCCTCAATTAGCTGCAGCAACCTTGTTAACTTTTCTGGACTGTGTTCCAATGGAATaGGGAGGTCATACTTCTCAT | + |
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Preference number: 5 (lower is better) Translates to: KHVSRPQLAAATLLTFLDCVPME*GGHTSH Trigger: ATGAGAAGTATGACCTCCCAATTCCATTGGAACACA...GTCCAGAAAAGTTAACAAGGTTGCTGCAGCTAATTGAGGCCTGGAAACATGTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027567.14 ENSMUST00000112717.3 |
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| CDS-3UTR CAA 90 bp | AAACATGTTTCCAGGCCTCAATTAGCTGCAGCAACCTTGTTAACTTTTCTGGACGTGCAGATTTTTCTGTaGTCTTCTTGGTGGTTTCAT | + |
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Preference number: 5 (lower is better) Translates to: KHVSRPQLAAATLLTFLDVQIFL*SSWWFH Trigger: ATGAAACCACCAAGAAGACAACAGAAAAATCTGCAC...GTCCAGAAAAGTTAACAAGGTTGCTGCAGCTAATTGAGGCCTGGAAACATGTTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027567.14 ENSMUST00000112717.3 |
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| CDS-3UTR CAA 90 bp | AAACATGTTTCCAGGCCTCAATTAGCTGCAGCAACCTTGTTAACTTTTCTGGACTACTTCTCATCCACTTaGAACCGAGGCAAAGATAAA | + |
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Preference number: 5 (lower is better) Translates to: KHVSRPQLAAATLLTFLDYFSST*NRGKDK Trigger: TTTATCTTTGCCTCGGTTCAAAGTGGATGAGAAGTA...GTCCAGAAAAGTTAACAAGGTTGCTGCAGCTAATTGAGGCCTGGAAACATGTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027567.14 ENSMUST00000112717.3 |
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| CDS-3UTR CAA 90 bp | AAACATGTTTCCAGGCCTCAATTAGCTGCAGCAACCTTGTTAACTTTTCTGGACGATTTTTCCATTTGTTaGGCTTTCTACCCAGGAATT | + |
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Preference number: 5 (lower is better) Translates to: KHVSRPQLAAATLLTFLDDFSIC*AFYPGI Trigger: AATTCCTGGGTAGAAAGCCAAACAAATGGAAAAATC...GTCCAGAAAAGTTAACAAGGTTGCTGCAGCTAATTGAGGCCTGGAAACATGTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027567.14 ENSMUST00000112717.3 |
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| CDS-3UTR CAA 90 bp | GAAACATGTTTCCAGGCCTCAATTAGCTGCAGCAACCTTGTTAACTTTTCTGGATGCTTTTCATCAAATTaGTGGTTCCATTGTCCTTTG | + |
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Preference number: 5 (lower is better) Translates to: ETCFQASISCSNLVNFSGCFSSN*WFHCPL Trigger: CAAAGGACAATGGAACCACAAATTTGATGAAAAGCA...TCCAGAAAAGTTAACAAGGTTGCTGCAGCTAATTGAGGCCTGGAAACATGTTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027567.14 ENSMUST00000112717.3 |
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| CDS-3UTR CAA 90 bp | AAACATGTTTCCAGGCCTCAATTAGCTGCAGCAACCTTGTTAACTTTTCTGGACTGCTTTTCATCAAATTaGTGGTTCCATTGTCCTTTG | + |
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Preference number: 5 (lower is better) Translates to: KHVSRPQLAAATLLTFLDCFSSN*WFHCPL Trigger: CAAAGGACAATGGAACCACAAATTTGATGAAAAGCA...GTCCAGAAAAGTTAACAAGGTTGCTGCAGCTAATTGAGGCCTGGAAACATGTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027567.14 ENSMUST00000112717.3 |
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| CDS-3UTR CAA 90 bp | GAAACATGTTTCCAGGCCTCAATTAGCTGCAGCAACCTTGTTAACTTTTCTGGAGTTAAATTCGATGTTTaGTTTCATCATCTGGACAGG | + |
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Preference number: 5 (lower is better) Translates to: ETCFQASISCSNLVNFSGVKFDV*FHHLDR Trigger: CCTGTCCAGATGATGAAACAAAACATCGAATTTAAC...TCCAGAAAAGTTAACAAGGTTGCTGCAGCTAATTGAGGCCTGGAAACATGTTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027567.14 ENSMUST00000112717.3 |
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| CDS-3UTR CAA 90 bp | AAACATGTTTCCAGGCCTCAATTAGCTGCAGCAACCTTGTTAACTTTTCTGGACGTTAAATTCGATGTTTaGTTTCATCATCTGGACAGG | + |
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Preference number: 5 (lower is better) Translates to: KHVSRPQLAAATLLTFLDVKFDV*FHHLDR Trigger: CCTGTCCAGATGATGAAACAAAACATCGAATTTAAC...GTCCAGAAAAGTTAACAAGGTTGCTGCAGCTAATTGAGGCCTGGAAACATGTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027567.14 ENSMUST00000112717.3 |
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| CDS CCA 72 bp | TTGAGTGCTGCTCATACCAGAGAAGTCAGCCTTCTGTaGATCAAAGGCATCGACCATTCCCATGTGTTCCAA | + |
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Preference number: 6 (lower is better) Translates to: LSAAHTREVSLL*IKGIDHSHVFQ Trigger: TTGGAACACATGGGAATGGTCGATGCCTTTGATCCACAGAAGGCTGACTTCTCTGGTATGAGCAGCACTCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027567.14 ENSMUST00000112717.3 |
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| CDS TCA 72 bp | AAGGACTTGTGTAAAACTTTAGACACCACAAGACCTTaGGTGCTGCTCATACCAGAGAAGTCAGCCTTCTGT | + |
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Preference number: 6 (lower is better) Translates to: KDLCKTLDTTRP*VLLIPEKSAFC Trigger: ACAGAAGGCTGACTTCTCTGGTATGAGCAGCACTCAAGGTCTTGTGGTGTCTAAAGTTTTACACAAGTCCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027567.14 ENSMUST00000112717.3 |
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| CDS TCA 72 bp | AACAGAAATCTTCTGCTATCTGTGCTGATGTTAAACTaGCTTCCACACCTGTTGCAGCAGCAGCTTCTGTTC | + |
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Preference number: 6 (lower is better) Translates to: NRNLLLSVLMLN*LPHLLQQQLLF Trigger: GAACAGAAGCTGCTGCTGCAACAGGTGTGGAAGTCAGTTTAACATCAGCACAGATAGCAGAAGATTTCTGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027567.14 ENSMUST00000112717.3 |
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| CDS CCA 72 bp | TCAATTTGTTTTTCAGTGTTTCCTTTGGCTCCAAGCTaGAGCATTGCTAATGCTGTCATCATGCTGATCGGG | + |
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Preference number: 6 (lower is better) Translates to: SICFSVFPLAPS*SIANAVIMLIG Trigger: CCCGATCAGCATGATGACAGCATTAGCAATGCTCCAGCTTGGAGCCAAAGGAAACACTGAAAAACAAATTGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027567.14 ENSMUST00000112717.3 |
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| CDS CCA 72 bp | TGGATCAAAGGCATCGACCATTCCCATGTGTTCCAATaGAATTGGGAGGTCATACTTCTCATCCACTTTGAA | + |
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Preference number: 6 (lower is better) Translates to: WIKGIDHSHVFQ*NWEVILLIHFE Trigger: TTCAAAGTGGATGAGAAGTATGACCTCCCAATTCCATTGGAACACATGGGAATGGTCGATGCCTTTGATCCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027567.14 ENSMUST00000112717.3 |
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| CDS CAA 72 bp | TCAGCAGTGAGTTGTTCTTCAAGCTGCTTCAGACCATaGATTTCCACTGGCAACAGGACAATCATACTTAGC | + |
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Preference number: 6 (lower is better) Translates to: SAVSCSSSCFRP*ISTGNRTIILS Trigger: GCTAAGTATGATTGTCCTGTTGCCAGTGGAAATCAATGGTCTGAAGCAGCTTGAAGAACAACTCACTGCTGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027567.14 ENSMUST00000112717.3 |
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| CDS GCA 72 bp | TTGAACCGAGGCAAAGATAAATACAACTCGGTCATATaGATGTTTTCTGCTCTTGTCCACTCCAGTAACTTG | + |
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Preference number: 6 (lower is better) Translates to: LNRGKDKYNSVI*MFSALVHSSNL Trigger: CAAGTTACTGGAGTGGACAAGAGCAGAAAACATGCATATGACCGAGTTGTATTTATCTTTGCCTCGGTTCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027567.14 ENSMUST00000112717.3 |
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| CDS CAA 72 bp | TGTCTTCCAAAAATGTCTGGACAAATGGGAAACCCTTaGCTCCATAGATACTGTTGGCAGCCTTTAGATCAT | + |
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Preference number: 6 (lower is better) Translates to: CLPKMSGQMGNP*LHRYCWQPLDH Trigger: ATGATCTAAAGGCTGCCAACAGTATCTATGGAGCAAAGGGTTTCCCATTTGTCCAGACATTTTTGGAAGACA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027567.14 ENSMUST00000112717.3 |
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| CDS CAA 72 bp | TCCAATGGAATTGGGAGGTCATACTTCTCATCCACTTaGAACCGAGGCAAAGATAAATACAACTCGGTCATA | + |
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Preference number: 6 (lower is better) Translates to: SNGIGRSYFSST*NRGKDKYNSVI Trigger: TATGACCGAGTTGTATTTATCTTTGCCTCGGTTCAAAGTGGATGAGAAGTATGACCTCCCAATTCCATTGGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027567.14 ENSMUST00000112717.3 |
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| CDS CCA 72 bp | ATATTCCTTAATGTCTTCCAAAAATGTCTGGACAAATaGGAAACCCTTTGCTCCATAGATACTGTTGGCAGC | + |
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Preference number: 6 (lower is better) Translates to: IFLNVFQKCLDK*ETLCSIDTVGS Trigger: GCTGCCAACAGTATCTATGGAGCAAAGGGTTTCCCATTTGTCCAGACATTTTTGGAAGACATTAAGGAATAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027567.14 ENSMUST00000112717.3 |
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| CDS CAA 72 bp | CACATCCTCCAGAAACATGAAGTTAAATTCGATGTTTaGTTTCATCATCTGGACAGGTTTACTTGTGTTCTT | + |
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Preference number: 6 (lower is better) Translates to: HILQKHEVKFDV*FHHLDRFTCVL Trigger: AAGAACACAAGTAAACCTGTCCAGATGATGAAACAAAACATCGAATTTAACTTCATGTTTCTGGAGGATGTG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027567.14 ENSMUST00000112717.3 |
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