Pregenerated sensors for SERPINB2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000062345Ensembl transcript IDs: ENSMUST00000009356.11, ENSMUST00000064916.9, ENSMUST00000143832.8, ENSMUST00000146597.2
Found 32 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GAAGTCTTCAACACTGCTAAATTGAAGTACCTGGGCCATCTGGTCTaGAGTAGTCCCTTTGGTACCCAAATATACCATAGCCAAAGCAGT | + |
|
Preference number: 1 (lower is better) Translates to: EVFNTAKLKYLGHLV*SSPFGTQIYHSQSS Trigger: ACTGCTTTGGCTATGGTATATTTGGGTACCAAAGGGACTACTGCAGACCAGATGGCCCAGGTACTTCAATTTAGCAGTGTTGAAGACTTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143832.8 |
||
| 3UTR GCA 72 bp | AACACTGCTAAATTGAAGTACCTGGGCCATCTGGTCTaGAGTAGTCCCTTTGGTACCCAAATATACCATAGC | + |
|
Preference number: 3 (lower is better) Translates to: NTAKLKYLGHLV*SSPFGTQIYHS Trigger: GCTATGGTATATTTGGGTACCAAAGGGACTACTGCAGACCAGATGGCCCAGGTACTTCAATTTAGCAGTGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143832.8 |
||
| CDS-3UTR CCA 90 bp | ACCTGGGCCATCTGGTCTGCAGTAGTCCCTTTGGTACCCAAATATACCATAGCCTGGAGGAACATCATCTaGACAGGTATGCTCTCATGC | + |
|
Preference number: 4 (lower is better) Translates to: TWAIWSAVVPLVPKYTIAWRNII*TGMLSC Trigger: GCATGAGAGCATACCTGTCCAGATGATGTTCCTCCA...GGCTATGGTATATTTGGGTACCAAAGGGACTACTGCAGACCAGATGGCCCAGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143832.8 |
||
| CDS-3UTR TCA 90 bp | TTGAAGTACCTGGGCCATCTGGTCTGCAGTAGTCCCTTTGGTACCCAAATATACGCAACAGGAGCATGCTaGTGTTTCCAGTATGCGGAA | + |
|
Preference number: 4 (lower is better) Translates to: LKYLGHLVCSSPFGTQIYATGAC*CFQYAE Trigger: TTCCGCATACTGGAAACATCAGCATGCTCCTGTTGC...GTATATTTGGGTACCAAAGGGACTACTGCAGACCAGATGGCCCAGGTACTTCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143832.8 |
||
| CDS-3UTR GCA 90 bp | TTGAAGTACCTGGGCCATCTGGTCTGCAGTAGTCCCTTTGGTACCCAAATATACTCATCTGGACAGGTATaGTCTCATGCGAGTTCACAC | + |
|
Preference number: 4 (lower is better) Translates to: LKYLGHLVCSSPFGTQIYSSGQV*SHASSH Trigger: GTGTGAACTCGCATGAGAGCATACCTGTCCAGATGA...GTATATTTGGGTACCAAAGGGACTACTGCAGACCAGATGGCCCAGGTACTTCAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143832.8 |
||
| CDS-3UTR TCA 90 bp | GTCCCTTTGGTACCCAAATATACCATAGCCAAAGCAGTTGAGATGCCCCAGGGGGGATGTATTCTTCTTTaGATCTTGCAGACTTCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: VPLVPKYTIAKAVEMPQGGCILL*ILQTSL Trigger: GAGAGAAGTCTGCAAGATTCAAAGAAGAATACATCC...CCCCTGGGGCATCTCAACTGCTTTGGCTATGGTATATTTGGGTACCAAAGGGAC 47% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000143832.8 |
||
| CDS-3UTR CCA 90 bp | AAGTACCTGGGCCATCTGGTCTGCAGTAGTCCCTTTGGTACCCAAATATACCATTCACCAGCACCATCTTaGTGTCTTCATCTACAGAAC | + |
|
Preference number: 4 (lower is better) Translates to: KYLGHLVCSSPFGTQIYHSPAPS*CLHLQN Trigger: GTTCTGTAGATGAAGACACCAAGATGGTGCTGGTGA...ATGGTATATTTGGGTACCAAAGGGACTACTGCAGACCAGATGGCCCAGGTACTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143832.8 |
||
| CDS-3UTR CCA 90 bp | GCTAAATTGAAGTACCTGGGCCATCTGGTCTGCAGTAGTCCCTTTGGTACCCAAATGTTCAGCTTTGCATaGAGGAACATCATCTGGACA | + |
|
Preference number: 4 (lower is better) Translates to: AKLKYLGHLVCSSPFGTQMFSFA*RNIIWT Trigger: TGTCCAGATGATGTTCCTCCATGCAAAGCTGAACAT...TTGGGTACCAAAGGGACTACTGCAGACCAGATGGCCCAGGTACTTCAATTTAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143832.8 |
||
| CDS-3UTR TCA 90 bp | CCTTTGGTACCCAAATATACCATAGCCAAAGCAGTTGAGATGCCCCAGGGGGAATGCTTCTGGTTCTGTTaGGTAATATTTCTTAGAGAG | + |
|
Preference number: 4 (lower is better) Translates to: PLVPKYTIAKAVEMPQGECFWFC*VIFLRE Trigger: CTCTCTAAGAAATATTACTCAACAGAACCAGAAGCA...TTCCCCCTGGGGCATCTCAACTGCTTTGGCTATGGTATATTTGGGTACCAAAGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000143832.8 |
||
| CDS-3UTR TCA 90 bp | GTAGTCCCTTTGGTACCCAAATATACCATAGCCAAAGCAGTTGAGATGCCCCAGATTTCACCTTTGGTTTaGGTCTTGACCCAAGAATTA | + |
|
Preference number: 4 (lower is better) Translates to: VVPLVPKYTIAKAVEMPQISPLV*VLTQEL Trigger: TAATTCTTGGGTCAAGACTCAAACCAAAGGTGAAAT...CTGGGGCATCTCAACTGCTTTGGCTATGGTATATTTGGGTACCAAAGGGACTAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143832.8 |
||
| CDS-3UTR GCA 90 bp | AAGTACCTGGGCCATCTGGTCTGCAGTAGTCCCTTTGGTACCCAAATATACCATTTCTTCTTTGAATCTTaGAGACTTCTCTCCAAACAG | + |
|
Preference number: 4 (lower is better) Translates to: KYLGHLVCSSPFGTQIYHFFFES*RLLSKQ Trigger: CTGTTTGGAGAGAAGTCTGCAAGATTCAAAGAAGAA...ATGGTATATTTGGGTACCAAAGGGACTACTGCAGACCAGATGGCCCAGGTACTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143832.8 |
||
| CDS GCA 90 bp | ACCATGGCCAGTTCTTCCTGTCATAACTGCCCCAGTCCCACCAGCTaGCACAGTGCCCTCCTCGGTGACATCCACGCTGGCTTGATGGAA | + |
|
Preference number: 5 (lower is better) Translates to: TMASSSCHNCPSPTS*HSALLGDIHAGLME Trigger: TTCCATCAAGCCAGCGTGGATGTCACCGAGGAGGGCACTGTGGCAGCTGGTGGGACTGGGGCAGTTATGACAGGAAGAACTGGCCATGGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000009356.11 ENSMUST00000064916.9 |
||
| CDS TCA 90 bp | CCACCAGCTGCCACAGTGCCCTCCTCGGTGACATCCACGCTGGCTTaGTGGAACACCTCAGAAAGAAAAAGGTCATTCCTCTCAGACATT | + |
|
Preference number: 5 (lower is better) Translates to: PPAATVPSSVTSTLA*WNTSERKRSFLSDI Trigger: AATGTCTGAGAGGAATGACCTTTTTCTTTCTGAGGTGTTCCATCAAGCCAGCGTGGATGTCACCGAGGAGGGCACTGTGGCAGCTGGTGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000009356.11 ENSMUST00000064916.9 |
||
| CDS-3UTR CAA 90 bp | GTCCCTTTGGTACCCAAATATACCATAGCCAAAGCAGTTGAGATGCCCCAGGGGTTCACCAGCACCATCTaGGTGTCTTCATCTACAGAA | + |
|
Preference number: 5 (lower is better) Translates to: VPLVPKYTIAKAVEMPQGFTSTI*VSSSTE Trigger: TTCTGTAGATGAAGACACCAAGATGGTGCTGGTGAA...CCCCTGGGGCATCTCAACTGCTTTGGCTATGGTATATTTGGGTACCAAAGGGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000143832.8 |
||
| CDS TCA 90 bp | ATGGAACACCTCAGAAAGAAAAAGGTCATTCCTCTCAGACATTCCTaGGAAGTTGGCCTTGCCCTTGTTGAAGGCATCCTCCATGCCCAT | + |
|
Preference number: 5 (lower is better) Translates to: MEHLRKKKVIPLRHS*EVGLALVEGILHAH Trigger: ATGGGCATGGAGGATGCCTTCAACAAGGGCAAGGCCAACTTCTCAGGAATGTCTGAGAGGAATGACCTTTTTCTTTCTGAGGTGTTCCAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000009356.11 ENSMUST00000064916.9 |
||
| CDS-3UTR CAA 90 bp | GTCCCTTTGGTACCCAAATATACCATAGCCAAAGCAGTTGAGATGCCCCAGGGGTCTTTGCTGATCCACTaGTTGAAGTTGGCAAAGTTT | + |
|
Preference number: 5 (lower is better) Translates to: VPLVPKYTIAKAVEMPQGSLLIH*LKLAKF Trigger: AAACTTTGCCAACTTCAACAAGTGGATCAGCAAAGA...CCCCTGGGGCATCTCAACTGCTTTGGCTATGGTATATTTGGGTACCAAAGGGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000143832.8 ENSMUST00000146597.2 |
||
| CDS-3UTR CAA 90 bp | GTAGTCCCTTTGGTACCCAAATATACCATAGCCAAAGCAGTTGAGATGCCCCAGTCATCCAGTGTGTCTTaGCTGATCCACTTGTTGAAG | + |
|
Preference number: 5 (lower is better) Translates to: VVPLVPKYTIAKAVEMPQSSSVS*LIHLLK Trigger: CTTCAACAAGTGGATCAGCAAAGACACACTGGATGA...CTGGGGCATCTCAACTGCTTTGGCTATGGTATATTTGGGTACCAAAGGGACTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000143832.8 ENSMUST00000146597.2 |
||
| CDS GCA 90 bp | CTCCATGCCCATGCTTTGAAGAATGGACTTGAGTTCGTAGCTTTGTaGCAGTTTGAACTTGGGAATGTAGACCACAACATCATCTTCATC | + |
|
Preference number: 5 (lower is better) Translates to: LHAHALKNGLEFVAL*QFELGNVDHNIIFI Trigger: GATGAAGATGATGTTGTGGTCTACATTCCCAAGTTCAAACTGGCACAAAGCTACGAACTCAAGTCCATTCTTCAAAGCATGGGCATGGAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000009356.11 ENSMUST00000064916.9 |
||
| CDS-3UTR CAA 90 bp | AGAGCAAACTGGTTGATAGATACTGCTAGTGAGGCCATTGGGCAACCTTATTTTTCATCCAGTGTGTCTTaGCTGATCCACTTGTTGAAG | + |
|
Preference number: 5 (lower is better) Translates to: RANWLIDTASEAIGQPYFSSSVS*LIHLLK Trigger: CTTCAACAAGTGGATCAGCAAAGACACACTGGATGA...AAAATAAGGTTGCCCAATGGCCTCACTAGCAGTATCTATCAACCAGTTTGCTCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000146597.2 |
||
| CDS-3UTR CAA 90 bp | AACTGGTTGATAGATACTGCTAGTGAGGCCATTGGGCAACCTTATTTTCCTCTCTCTTTGCTGATCCACTaGTTGAAGTTGGCAAAGTTT | + |
|
Preference number: 5 (lower is better) Translates to: NWLIDTASEAIGQPYFPLSLLIH*LKLAKF Trigger: AAACTTTGCCAACTTCAACAAGTGGATCAGCAAAGA...GAGAGGAAAATAAGGTTGCCCAATGGCCTCACTAGCAGTATCTATCAACCAGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146597.2 |
||
| CDS GCA 72 bp | AGTTCTTCCTGTCATAACTGCCCCAGTCCCACCAGCTaGCACAGTGCCCTCCTCGGTGACATCCACGCTGGC | + |
|
Preference number: 6 (lower is better) Translates to: SSSCHNCPSPTS*HSALLGDIHAG Trigger: GCCAGCGTGGATGTCACCGAGGAGGGCACTGTGGCAGCTGGTGGGACTGGGGCAGTTATGACAGGAAGAACT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000009356.11 ENSMUST00000064916.9 |
||
| CDS CAA 90 bp | CCCACCAGCTGCCACAGTGCCCTCCTCGGTGACATCCACGCTGGCTaGATGGAACACCTCAGAAAGAAAAAGGTCATTCCTCTCAGACAT | + |
|
Preference number: 6 (lower is better) Translates to: PTSCHSALLGDIHAG*MEHLRKKKVIPLRH Trigger: ATGTCTGAGAGGAATGACCTTTTTCTTTCTGAGGTGTTCCATCAAGCCAGCGTGGATGTCACCGAGGAGGGCACTGTGGCAGCTGGTGGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000009356.11 ENSMUST00000064916.9 |
||
| CDS CAA 72 bp | TGCCACAGTGCCCTCCTCGGTGACATCCACGCTGGCTaGATGGAACACCTCAGAAAGAAAAAGGTCATTCCT | + |
|
Preference number: 6 (lower is better) Translates to: CHSALLGDIHAG*MEHLRKKKVIP Trigger: AGGAATGACCTTTTTCTTTCTGAGGTGTTCCATCAAGCCAGCGTGGATGTCACCGAGGAGGGCACTGTGGCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000009356.11 ENSMUST00000064916.9 |
||
| CDS GCA 72 bp | TCAGCTTTGCATGGAGGAACATCATCTGGACAGGTATaGTCTCATGCGAGTTCACACGGAAAGGATAAAGCC | + |
|
Preference number: 6 (lower is better) Translates to: SALHGGTSSGQV*SHASSHGKDKA Trigger: GGCTTTATCCTTTCCGTGTGAACTCGCATGAGAGCATACCTGTCCAGATGATGTTCCTCCATGCAAAGCTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000009356.11 ENSMUST00000064916.9 ENSMUST00000143832.8 |
||
| CDS TCA 72 bp | CTCAGAAAGAAAAAGGTCATTCCTCTCAGACATTCCTaGGAAGTTGGCCTTGCCCTTGTTGAAGGCATCCTC | + |
|
Preference number: 6 (lower is better) Translates to: LRKKKVIPLRHS*EVGLALVEGIL Trigger: GAGGATGCCTTCAACAAGGGCAAGGCCAACTTCTCAGGAATGTCTGAGAGGAATGACCTTTTTCTTTCTGAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000009356.11 ENSMUST00000064916.9 |
||
| CDS CAA 72 bp | GCCCATGCTTTGAAGAATGGACTTGAGTTCGTAGCTTaGTGCCAGTTTGAACTTGGGAATGTAGACCACAAC | + |
|
Preference number: 6 (lower is better) Translates to: AHALKNGLEFVA*CQFELGNVDHN Trigger: GTTGTGGTCTACATTCCCAAGTTCAAACTGGCACAAAGCTACGAACTCAAGTCCATTCTTCAAAGCATGGGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000009356.11 ENSMUST00000064916.9 |
||
| CDS CAA 90 bp | ATCCTCCATGCCCATGCTTTGAAGAATGGACTTGAGTTCGTAGCTTaGTGCCAGTTTGAACTTGGGAATGTAGACCACAACATCATCTTC | + |
|
Preference number: 6 (lower is better) Translates to: ILHAHALKNGLEFVA*CQFELGNVDHNIIF Trigger: GAAGATGATGTTGTGGTCTACATTCCCAAGTTCAAACTGGCACAAAGCTACGAACTCAAGTCCATTCTTCAAAGCATGGGCATGGAGGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000009356.11 ENSMUST00000064916.9 |
||
| CDS TCA 72 bp | CCTTCGGGTAGCAGGTTTGGGATTTCACCTTTGGTTTaGGTCTTGACCCAAGAATTAATCTTTTCCCTAGCT | + |
|
Preference number: 6 (lower is better) Translates to: PSGSRFGISPLV*VLTQELIFSLA Trigger: AGCTAGGGAAAAGATTAATTCTTGGGTCAAGACTCAAACCAAAGGTGAAATCCCAAACCTGCTACCCGAAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000009356.11 ENSMUST00000064916.9 ENSMUST00000143832.8 |
||
| CDS CAA 72 bp | GAGTCTTCAGGTCCTTTATGTATCCAATGTTCAGCTTaGCATGGAGGAACATCATCTGGACAGGTATGCTCT | + |
|
Preference number: 6 (lower is better) Translates to: ESSGPLCIQCSA*HGGTSSGQVCS Trigger: AGAGCATACCTGTCCAGATGATGTTCCTCCATGCAAAGCTGAACATTGGATACATAAAGGACCTGAAGACTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000009356.11 ENSMUST00000064916.9 ENSMUST00000143832.8 |
||
| CDS TCA 72 bp | ATGCTGATGTTTCCAGTATGCGGAAGTTCTAGGATCTaGGTCTTCAGGTCCTTTATGTATCCAATGTTCAGC | + |
|
Preference number: 6 (lower is better) Translates to: MLMFPVCGSSRI*VFRSFMYPMFS Trigger: GCTGAACATTGGATACATAAAGGACCTGAAGACTCAGATCCTAGAACTTCCGCATACTGGAAACATCAGCAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000009356.11 ENSMUST00000064916.9 ENSMUST00000143832.8 |
||
| CDS CAA 72 bp | TGGGCAACCACAACATCATCTTCATCCAGTGTGTCTTaGCTGATCCACTTGTTGAAGTTGGCAAAGTTTATT | + |
|
Preference number: 6 (lower is better) Translates to: WATTTSSSSSVS*LIHLLKLAKFI Trigger: AATAAACTTTGCCAACTTCAACAAGTGGATCAGCAAAGACACACTGGATGAAGATGATGTTGTGGTTGCCCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143832.8 |
||
| CDS CAA 72 bp | ACTTTTAACACAACATCATCTTCATCCAGTGTGTCTTaGCTGATCCACTTGTTGAAGTTGGCAAAGTTTATT | + |
|
Preference number: 6 (lower is better) Translates to: TFNTTSSSSSVS*LIHLLKLAKFI Trigger: AATAAACTTTGCCAACTTCAACAAGTGGATCAGCAAAGACACACTGGATGAAGATGATGTTGTGTTAAAAGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146597.2 |
||