Pregenerated sensors for SERPINB1B (Mus musculus)
Ensembl gene IDs: ENSMUSG00000051029Ensembl transcript IDs: ENSMUST00000016951.8
Found 20 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR GCA 90 bp | GGGAAAAGCCATACATTTTCATGCCTATCAGGAGCCTATTACAATTaGACAGGTTACCTCACAGTCATGAATCTATACATCTATTTAATT | + |
Preference number: 1 (lower is better) Translates to: GKSHTFSCLSGAYYN*TGYLTVMNLYIYLI Trigger: AATTAAATAGATGTATAGATTCATGACTGTGAGGTAACCTGTGCAATTGTAATAGGCTCCTGATAGGCATGAAAATGTATGGCTTTTCCC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000016951.8 |
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3UTR GCA 72 bp | CATACATTTTCATGCCTATCAGGAGCCTATTACAATTaGACAGGTTACCTCACAGTCATGAATCTATACATC | + |
Preference number: 3 (lower is better) Translates to: HTFSCLSGAYYN*TGYLTVMNLYI Trigger: GATGTATAGATTCATGACTGTGAGGTAACCTGTGCAATTGTAATAGGCTCCTGATAGGCATGAAAATGTATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016951.8 |
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CDS CCA 90 bp | GGAGAGAAGAAGATGTTTCCTGTGGGGCTGCTTTCCTTCAGTGTGTaGAACAGCTCCAAGGTGAAGAGGGTGTTCGCTGAACTCAGCTGC | + |
Preference number: 5 (lower is better) Translates to: GEKKMFPVGLLSFSV*NSSKVKRVFAELSC Trigger: GCAGCTGAGTTCAGCGAACACCCTCTTCACCTTGGAGCTGTTCCACACACTGAAGGAAAGCAGCCCCACAGGAAACATCTTCTTCTCTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016951.8 |
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CDS TCA 90 bp | TTGACCCATTGGTTTATCTCCTTCCTTGCATCCTCAGAGGCATGCTaGAAATCCACAGCGGCCAAGTCAGCACTGTACATTTTCTGGGTG | + |
Preference number: 5 (lower is better) Translates to: LTHWFISFLASSEAC*KSTAAKSALYIFWV Trigger: CACCCAGAAAATGTACAGTGCTGACTTGGCCGCTGTGGATTTTCAGCATGCCTCTGAGGATGCAAGGAAGGAGATAAACCAATGGGTCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016951.8 |
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CDS CCA 90 bp | CCGAATAAAGAAAAGGAATGGGTGATCCACAGTGAATACTTCCTGTaGAGTAGGCATCTTCTCGCAGAGCACCTGAATAATGCCTCCTGT | + |
Preference number: 5 (lower is better) Translates to: PNKEKEWVIHSEYFL*SRHLLAEHLNNASC Trigger: ACAGGAGGCATTATTCAGGTGCTCTGCGAGAAGATGCCTACTCCACAGGAAGTATTCACTGTGGATCACCCATTCCTTTTCTTTATTCGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016951.8 |
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CDS TCA 90 bp | AGATGCTCCCAGCTTGCTCACTTCAGCAGTCAGGCTTTGAAAGCATaGATGGATGTCCTCAACAGAGTCAAAATGAAGAGTCTTAGAGAG | + |
Preference number: 5 (lower is better) Translates to: RCSQLAHFSSQALKA*MDVLNRVKMKSLRE Trigger: CTCTCTAAGACTCTTCATTTTGACTCTGTTGAGGACATCCATTCATGCTTTCAAAGCCTGACTGCTGAAGTGAGCAAGCTGGGAGCATCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016951.8 |
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CDS CCA 90 bp | GCAGCTGCCTCTGTTCCCTGCTCATTAACATCCACAAATGACTTGTaGACAATTTTTGATACGAAAAGATCTCTGGATCCTGACATGCCA | + |
Preference number: 5 (lower is better) Translates to: AAASVPCSLTSTNDL*TIFDTKRSLDPDMP Trigger: TGGCATGTCAGGATCCAGAGATCTTTTCGTATCAAAAATTGTCCACAAGTCATTTGTGGATGTTAATGAGCAGGGAACAGAGGCAGCTGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000016951.8 |
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CDS CCA 90 bp | GAAGATCATATTAGCTGTGGGGTTGTGCCGAATAAAGAAAAGGAATaGGTGATCCACAGTGAATACTTCCTGTGGAGTAGGCATCTTCTC | + |
Preference number: 5 (lower is better) Translates to: EDHISCGVVPNKEKE*VIHSEYFLWSRHLL Trigger: GAGAAGATGCCTACTCCACAGGAAGTATTCACTGTGGATCACCCATTCCTTTTCTTTATTCGGCACAACCCCACAGCTAATATGATCTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000016951.8 |
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CDS TCA 90 bp | ACATGGACATCAATGTTTCTCAAGTTCTCATGTTTGGTCCATTCATaGAGTTTTCCCAAAGTTAATTGCTCCTCAATCTTCTTAAGACCC | + |
Preference number: 5 (lower is better) Translates to: TWTSMFLKFSCLVHS*SFPKVNCSSIFLRP Trigger: GGGTCTTAAGAAGATTGAGGAGCAATTAACTTTGGGAAAACTTCATGAATGGACCAAACATGAGAACTTGAGAAACATTGATGTCCATGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016951.8 |
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CDS TCA 72 bp | ACTTCCTGTGGAGTAGGCATCTTCTCGCAGAGCACCTaGATAATGCCTCCTGTGGCAGCAGCTGCCTCTGTT | + |
Preference number: 6 (lower is better) Translates to: TSCGVGIFSQST*IMPPVAAAASV Trigger: AACAGAGGCAGCTGCTGCCACAGGAGGCATTATTCAGGTGCTCTGCGAGAAGATGCCTACTCCACAGGAAGT 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016951.8 |
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CDS CAA 72 bp | AGATCTCTGGATCCTGACATGCCAGAGAGATCAGCCTaGCCACTACTAAAGAGATCCTGCACTCCCAGGCAG | + |
Preference number: 6 (lower is better) Translates to: RSLDPDMPERSA*PLLKRSCTPRQ Trigger: CTGCCTGGGAGTGCAGGATCTCTTTAGTAGTGGCAAGGCTGATCTCTCTGGCATGTCAGGATCCAGAGATCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016951.8 |
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CDS GCA 72 bp | CCAGAGAGATCAGCCTTGCCACTACTAAAGAGATCCTaGACTCCCAGGCAGCACAGGTTAGAGTTGAGTATG | + |
Preference number: 6 (lower is better) Translates to: PERSALPLLKRS*TPRQHRLELSM Trigger: CATACTCAACTCTAACCTGTGCTGCCTGGGAGTGCAGGATCTCTTTAGTAGTGGCAAGGCTGATCTCTCTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016951.8 |
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CDS CAA 90 bp | GATACGAAAAGATCTCTGGATCCTGACATGCCAGAGAGATCAGCCTaGCCACTACTAAAGAGATCCTGCACTCCCAGGCAGCACAGGTTA | + |
Preference number: 6 (lower is better) Translates to: DTKRSLDPDMPERSA*PLLKRSCTPRQHRL Trigger: TAACCTGTGCTGCCTGGGAGTGCAGGATCTCTTTAGTAGTGGCAAGGCTGATCTCTCTGGCATGTCAGGATCCAGAGATCTTTTCGTATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016951.8 |
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CDS CAA 90 bp | GTCTACCACACCCTTAGCCAGCAGTTCTGGGATTTTACCTTCTGTTaGACCTTTGACCCATTGGTTTATCTCCTTCCTTGCATCCTCAGA | + |
Preference number: 6 (lower is better) Translates to: VYHTLSQQFWDFTFC*TFDPLVYLLPCILR Trigger: TCTGAGGATGCAAGGAAGGAGATAAACCAATGGGTCAAAGGTCAAACAGAAGGTAAAATCCCAGAACTGCTGGCTAAGGGTGTGGTAGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016951.8 |
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CDS TCA 72 bp | GATGCTCCCAGCTTGCTCACTTCAGCAGTCAGGCTTTaGAAGCATGAATGGATGTCCTCAACAGAGTCAAAA | + |
Preference number: 6 (lower is better) Translates to: DAPSLLTSAVRL*KHEWMSSTESK Trigger: TTTTGACTCTGTTGAGGACATCCATTCATGCTTTCAAAGCCTGACTGCTGAAGTGAGCAAGCTGGGAGCATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016951.8 |
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CDS CCA 72 bp | GAAAAGGAATGGGTGATCCACAGTGAATACTTCCTGTaGAGTAGGCATCTTCTCGCAGAGCACCTGAATAAT | + |
Preference number: 6 (lower is better) Translates to: EKEWVIHSEYFL*SRHLLAEHLNN Trigger: ATTATTCAGGTGCTCTGCGAGAAGATGCCTACTCCACAGGAAGTATTCACTGTGGATCACCCATTCCTTTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016951.8 |
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CDS CAA 90 bp | GCAGCAGCTGCCTCTGTTCCCTGCTCATTAACATCCACAAATGACTaGTGGACAATTTTTGATACGAAAAGATCTCTGGATCCTGACATG | + |
Preference number: 6 (lower is better) Translates to: AAAASVPCSLTSTND*WTIFDTKRSLDPDM Trigger: CATGTCAGGATCCAGAGATCTTTTCGTATCAAAAATTGTCCACAAGTCATTTGTGGATGTTAATGAGCAGGGAACAGAGGCAGCTGCTGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000016951.8 |
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CDS TCA 72 bp | CAGCTTGCTCACTTCAGCAGTCAGGCTTTGAAAGCATaGATGGATGTCCTCAACAGAGTCAAAATGAAGAGT | + |
Preference number: 6 (lower is better) Translates to: QLAHFSSQALKA*MDVLNRVKMKS Trigger: ACTCTTCATTTTGACTCTGTTGAGGACATCCATTCATGCTTTCAAAGCCTGACTGCTGAAGTGAGCAAGCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016951.8 |
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CDS CCA 72 bp | TCTGTTCCCTGCTCATTAACATCCACAAATGACTTGTaGACAATTTTTGATACGAAAAGATCTCTGGATCCT | + |
Preference number: 6 (lower is better) Translates to: SVPCSLTSTNDL*TIFDTKRSLDP Trigger: AGGATCCAGAGATCTTTTCGTATCAAAAATTGTCCACAAGTCATTTGTGGATGTTAATGAGCAGGGAACAGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000016951.8 |
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CDS TCA 72 bp | TCAATGTTTCTCAAGTTCTCATGTTTGGTCCATTCATaGAGTTTTCCCAAAGTTAATTGCTCCTCAATCTTC | + |
Preference number: 6 (lower is better) Translates to: SMFLKFSCLVHS*SFPKVNCSSIF Trigger: GAAGATTGAGGAGCAATTAACTTTGGGAAAACTTCATGAATGGACCAAACATGAGAACTTGAGAAACATTGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016951.8 |