RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SERPINB1B (Mus musculus)

Ensembl gene IDs: ENSMUSG00000051029

Ensembl transcript IDs: ENSMUST00000016951.8

Found 20 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GGGAAAAGCCATACATTTTCATGCCTATCAGGAGCCTATTACAATTaGACAGGTTACCTCACAGTCATGAATCTATACATCTATTTAATT +
Preference number: 1 (lower is better)
Translates to: GKSHTFSCLSGAYYN*TGYLTVMNLYIYLI
Trigger: AATTAAATAGATGTATAGATTCATGACTGTGAGGTAACCTGTGCAATTGTAATAGGCTCCTGATAGGCATGAAAATGTATGGCTTTTCCC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000016951.8
3UTR GCA 72 bp CATACATTTTCATGCCTATCAGGAGCCTATTACAATTaGACAGGTTACCTCACAGTCATGAATCTATACATC +
Preference number: 3 (lower is better)
Translates to: HTFSCLSGAYYN*TGYLTVMNLYI
Trigger: GATGTATAGATTCATGACTGTGAGGTAACCTGTGCAATTGTAATAGGCTCCTGATAGGCATGAAAATGTATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000016951.8
CDS CCA 90 bp GGAGAGAAGAAGATGTTTCCTGTGGGGCTGCTTTCCTTCAGTGTGTaGAACAGCTCCAAGGTGAAGAGGGTGTTCGCTGAACTCAGCTGC +
Preference number: 5 (lower is better)
Translates to: GEKKMFPVGLLSFSV*NSSKVKRVFAELSC
Trigger: GCAGCTGAGTTCAGCGAACACCCTCTTCACCTTGGAGCTGTTCCACACACTGAAGGAAAGCAGCCCCACAGGAAACATCTTCTTCTCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000016951.8
CDS TCA 90 bp TTGACCCATTGGTTTATCTCCTTCCTTGCATCCTCAGAGGCATGCTaGAAATCCACAGCGGCCAAGTCAGCACTGTACATTTTCTGGGTG +
Preference number: 5 (lower is better)
Translates to: LTHWFISFLASSEAC*KSTAAKSALYIFWV
Trigger: CACCCAGAAAATGTACAGTGCTGACTTGGCCGCTGTGGATTTTCAGCATGCCTCTGAGGATGCAAGGAAGGAGATAAACCAATGGGTCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000016951.8
CDS CCA 90 bp CCGAATAAAGAAAAGGAATGGGTGATCCACAGTGAATACTTCCTGTaGAGTAGGCATCTTCTCGCAGAGCACCTGAATAATGCCTCCTGT +
Preference number: 5 (lower is better)
Translates to: PNKEKEWVIHSEYFL*SRHLLAEHLNNASC
Trigger: ACAGGAGGCATTATTCAGGTGCTCTGCGAGAAGATGCCTACTCCACAGGAAGTATTCACTGTGGATCACCCATTCCTTTTCTTTATTCGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000016951.8
CDS TCA 90 bp AGATGCTCCCAGCTTGCTCACTTCAGCAGTCAGGCTTTGAAAGCATaGATGGATGTCCTCAACAGAGTCAAAATGAAGAGTCTTAGAGAG +
Preference number: 5 (lower is better)
Translates to: RCSQLAHFSSQALKA*MDVLNRVKMKSLRE
Trigger: CTCTCTAAGACTCTTCATTTTGACTCTGTTGAGGACATCCATTCATGCTTTCAAAGCCTGACTGCTGAAGTGAGCAAGCTGGGAGCATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000016951.8
CDS CCA 90 bp GCAGCTGCCTCTGTTCCCTGCTCATTAACATCCACAAATGACTTGTaGACAATTTTTGATACGAAAAGATCTCTGGATCCTGACATGCCA +
Preference number: 5 (lower is better)
Translates to: AAASVPCSLTSTNDL*TIFDTKRSLDPDMP
Trigger: TGGCATGTCAGGATCCAGAGATCTTTTCGTATCAAAAATTGTCCACAAGTCATTTGTGGATGTTAATGAGCAGGGAACAGAGGCAGCTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000016951.8
CDS CCA 90 bp GAAGATCATATTAGCTGTGGGGTTGTGCCGAATAAAGAAAAGGAATaGGTGATCCACAGTGAATACTTCCTGTGGAGTAGGCATCTTCTC +
Preference number: 5 (lower is better)
Translates to: EDHISCGVVPNKEKE*VIHSEYFLWSRHLL
Trigger: GAGAAGATGCCTACTCCACAGGAAGTATTCACTGTGGATCACCCATTCCTTTTCTTTATTCGGCACAACCCCACAGCTAATATGATCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000016951.8
CDS TCA 90 bp ACATGGACATCAATGTTTCTCAAGTTCTCATGTTTGGTCCATTCATaGAGTTTTCCCAAAGTTAATTGCTCCTCAATCTTCTTAAGACCC +
Preference number: 5 (lower is better)
Translates to: TWTSMFLKFSCLVHS*SFPKVNCSSIFLRP
Trigger: GGGTCTTAAGAAGATTGAGGAGCAATTAACTTTGGGAAAACTTCATGAATGGACCAAACATGAGAACTTGAGAAACATTGATGTCCATGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000016951.8
CDS TCA 72 bp ACTTCCTGTGGAGTAGGCATCTTCTCGCAGAGCACCTaGATAATGCCTCCTGTGGCAGCAGCTGCCTCTGTT +
Preference number: 6 (lower is better)
Translates to: TSCGVGIFSQST*IMPPVAAAASV
Trigger: AACAGAGGCAGCTGCTGCCACAGGAGGCATTATTCAGGTGCTCTGCGAGAAGATGCCTACTCCACAGGAAGT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000016951.8
CDS CAA 72 bp AGATCTCTGGATCCTGACATGCCAGAGAGATCAGCCTaGCCACTACTAAAGAGATCCTGCACTCCCAGGCAG +
Preference number: 6 (lower is better)
Translates to: RSLDPDMPERSA*PLLKRSCTPRQ
Trigger: CTGCCTGGGAGTGCAGGATCTCTTTAGTAGTGGCAAGGCTGATCTCTCTGGCATGTCAGGATCCAGAGATCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000016951.8
CDS GCA 72 bp CCAGAGAGATCAGCCTTGCCACTACTAAAGAGATCCTaGACTCCCAGGCAGCACAGGTTAGAGTTGAGTATG +
Preference number: 6 (lower is better)
Translates to: PERSALPLLKRS*TPRQHRLELSM
Trigger: CATACTCAACTCTAACCTGTGCTGCCTGGGAGTGCAGGATCTCTTTAGTAGTGGCAAGGCTGATCTCTCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000016951.8
CDS CAA 90 bp GATACGAAAAGATCTCTGGATCCTGACATGCCAGAGAGATCAGCCTaGCCACTACTAAAGAGATCCTGCACTCCCAGGCAGCACAGGTTA +
Preference number: 6 (lower is better)
Translates to: DTKRSLDPDMPERSA*PLLKRSCTPRQHRL
Trigger: TAACCTGTGCTGCCTGGGAGTGCAGGATCTCTTTAGTAGTGGCAAGGCTGATCTCTCTGGCATGTCAGGATCCAGAGATCTTTTCGTATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000016951.8
CDS CAA 90 bp GTCTACCACACCCTTAGCCAGCAGTTCTGGGATTTTACCTTCTGTTaGACCTTTGACCCATTGGTTTATCTCCTTCCTTGCATCCTCAGA +
Preference number: 6 (lower is better)
Translates to: VYHTLSQQFWDFTFC*TFDPLVYLLPCILR
Trigger: TCTGAGGATGCAAGGAAGGAGATAAACCAATGGGTCAAAGGTCAAACAGAAGGTAAAATCCCAGAACTGCTGGCTAAGGGTGTGGTAGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000016951.8
CDS TCA 72 bp GATGCTCCCAGCTTGCTCACTTCAGCAGTCAGGCTTTaGAAGCATGAATGGATGTCCTCAACAGAGTCAAAA +
Preference number: 6 (lower is better)
Translates to: DAPSLLTSAVRL*KHEWMSSTESK
Trigger: TTTTGACTCTGTTGAGGACATCCATTCATGCTTTCAAAGCCTGACTGCTGAAGTGAGCAAGCTGGGAGCATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000016951.8
CDS CCA 72 bp GAAAAGGAATGGGTGATCCACAGTGAATACTTCCTGTaGAGTAGGCATCTTCTCGCAGAGCACCTGAATAAT +
Preference number: 6 (lower is better)
Translates to: EKEWVIHSEYFL*SRHLLAEHLNN
Trigger: ATTATTCAGGTGCTCTGCGAGAAGATGCCTACTCCACAGGAAGTATTCACTGTGGATCACCCATTCCTTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000016951.8
CDS CAA 90 bp GCAGCAGCTGCCTCTGTTCCCTGCTCATTAACATCCACAAATGACTaGTGGACAATTTTTGATACGAAAAGATCTCTGGATCCTGACATG +
Preference number: 6 (lower is better)
Translates to: AAAASVPCSLTSTND*WTIFDTKRSLDPDM
Trigger: CATGTCAGGATCCAGAGATCTTTTCGTATCAAAAATTGTCCACAAGTCATTTGTGGATGTTAATGAGCAGGGAACAGAGGCAGCTGCTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000016951.8
CDS TCA 72 bp CAGCTTGCTCACTTCAGCAGTCAGGCTTTGAAAGCATaGATGGATGTCCTCAACAGAGTCAAAATGAAGAGT +
Preference number: 6 (lower is better)
Translates to: QLAHFSSQALKA*MDVLNRVKMKS
Trigger: ACTCTTCATTTTGACTCTGTTGAGGACATCCATTCATGCTTTCAAAGCCTGACTGCTGAAGTGAGCAAGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000016951.8
CDS CCA 72 bp TCTGTTCCCTGCTCATTAACATCCACAAATGACTTGTaGACAATTTTTGATACGAAAAGATCTCTGGATCCT +
Preference number: 6 (lower is better)
Translates to: SVPCSLTSTNDL*TIFDTKRSLDP
Trigger: AGGATCCAGAGATCTTTTCGTATCAAAAATTGTCCACAAGTCATTTGTGGATGTTAATGAGCAGGGAACAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000016951.8
CDS TCA 72 bp TCAATGTTTCTCAAGTTCTCATGTTTGGTCCATTCATaGAGTTTTCCCAAAGTTAATTGCTCCTCAATCTTC +
Preference number: 6 (lower is better)
Translates to: SMFLKFSCLVHS*SFPKVNCSSIF
Trigger: GAAGATTGAGGAGCAATTAACTTTGGGAAAACTTCATGAATGGACCAAACATGAGAACTTGAGAAACATTGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000016951.8