Pregenerated sensors for SERPINB1A (Mus musculus)
Ensembl gene IDs: ENSMUSG00000044734Ensembl transcript IDs: ENSMUST00000076352.8, ENSMUST00000091668.13
Found 66 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CAGCAGCATTTAGAGCCTTCCACTGTTGTCCTTCTCTTTTGTTTGTaGTGCTTTGTATCTCTGTTGCCATGGCTGCCCACCCAAACAGTT | + |
|
Preference number: 1 (lower is better) Translates to: QQHLEPSTVVLLFCL*CFVSLLPWLPTQTV Trigger: AACTGTTTGGGTGGGCAGCCATGGCAACAGAGATACAAAGCAGCACAAACAAAAGAGAAGGACAACAGTGGAAGGCTCTAAATGCTGCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076352.8 |
||
| 3UTR GCA 90 bp | CAGCATTTAGAGCCTTCCACTGTTGTCCTTCTCTTTTGTTTGTGCTaGTTTGTATCTCTGTTGCCATGGCTGCCCACCCAAACAGTTATC | + |
|
Preference number: 1 (lower is better) Translates to: QHLEPSTVVLLFCLC*FVSLLPWLPTQTVI Trigger: GATAACTGTTTGGGTGGGCAGCCATGGCAACAGAGATACAAAGCAGCACAAACAAAAGAGAAGGACAACAGTGGAAGGCTCTAAATGCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076352.8 |
||
| 3UTR CCA 90 bp | ATTTCGTCAATATTATCTTCACAGACTGTTGTTCTCTGGTTTGTATaGGCGGCAGCAGCATTTAGAGCCTTCCACTGTTGTCCTTCTCTT | + |
|
Preference number: 1 (lower is better) Translates to: ISSILSSQTVVLWFV*AAAAFRAFHCCPSL Trigger: AAGAGAAGGACAACAGTGGAAGGCTCTAAATGCTGCTGCCGCCCATACAAACCAGAGAACAACAGTCTGTGAAGATAATATTGACGAAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076352.8 |
||
| 3UTR CAA 90 bp | TGGGCGGCAGCAGCATTTAGAGCCTTCCACTGTTGTCCTTCTCTTTaGTTTGTGCTGCTTTGTATCTCTGTTGCCATGGCTGCCCACCCA | + |
|
Preference number: 2 (lower is better) Translates to: WAAAAFRAFHCCPSL*FVLLCISVAMAAHP Trigger: TGGGTGGGCAGCCATGGCAACAGAGATACAAAGCAGCACAAACAAAAGAGAAGGACAACAGTGGAAGGCTCTAAATGCTGCTGCCGCCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076352.8 |
||
| 3UTR CAA 90 bp | CGGCAGCAGCATTTAGAGCCTTCCACTGTTGTCCTTCTCTTTTGTTaGTGCTGCTTTGTATCTCTGTTGCCATGGCTGCCCACCCAAACA | + |
|
Preference number: 2 (lower is better) Translates to: RQQHLEPSTVVLLFC*CCFVSLLPWLPTQT Trigger: TGTTTGGGTGGGCAGCCATGGCAACAGAGATACAAAGCAGCACAAACAAAAGAGAAGGACAACAGTGGAAGGCTCTAAATGCTGCTGCCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076352.8 |
||
| 3UTR-3UTR CCA 90 bp | TCTGGTTTGTATGGGCGGCAGCAGCATTTAGAGCCTTCCACTGTTGTCCTTCTCACCTTTGATGTACTCTaGAGGTCATGCAAAAGCCGA | + |
|
Preference number: 2 (lower is better) Translates to: SGLYGRQQHLEPSTVVLLTFDVL*RSCKSR Trigger: TCGGCTTTTGCATGACCTCCAGAGTACATCAAAGGT...GAGAAGGACAACAGTGGAAGGCTCTAAATGCTGCTGCCGCCCATACAAACCAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076352.8 |
||
| 3UTR-3UTR CCA 90 bp | TATTATCTTCACAGACTGTTGTTCTCTGGTTTGTATGGGCGGCAGCAGCATTTAGTATCTCTGTTGCCATaGCTGCCCACCCAAACAGTT | + |
|
Preference number: 2 (lower is better) Translates to: YYLHRLLFSGLYGRQQHLVSLLP*LPTQTV Trigger: AACTGTTTGGGTGGGCAGCCATGGCAACAGAGATAC...TAAATGCTGCTGCCGCCCATACAAACCAGAGAACAACAGTCTGTGAAGATAATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076352.8 |
||
| 3UTR CAA 90 bp | AAAGTATCTGACCTTGGATTTCGTCAATATTATCTTCACAGACTGTaGTTCTCTGGTTTGTATGGGCGGCAGCAGCATTTAGAGCCTTCC | + |
|
Preference number: 2 (lower is better) Translates to: KVSDLGFRQYYLHRL*FSGLYGRQQHLEPS Trigger: GGAAGGCTCTAAATGCTGCTGCCGCCCATACAAACCAGAGAACAACAGTCTGTGAAGATAATATTGACGAAATCCAAGGTCAGATACTTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076352.8 |
||
| 3UTR-3UTR GCA 90 bp | GGATTTCGTCAATATTATCTTCACAGACTGTTGTTCTCTGGTTTGTATGGGCGGCTCTTTTGTTTGTGCTaGTTTGTATCTCTGTTGCCA | + |
|
Preference number: 2 (lower is better) Translates to: GFRQYYLHRLLFSGLYGRLFCLC*FVSLLP Trigger: TGGCAACAGAGATACAAAGCAGCACAAACAAAAGAG...CCGCCCATACAAACCAGAGAACAACAGTCTGTGAAGATAATATTGACGAAATCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076352.8 |
||
| 3UTR GCA 72 bp | GAGCCTTCCACTGTTGTCCTTCTCTTTTGTTTGTGCTaGTTTGTATCTCTGTTGCCATGGCTGCCCACCCAA | + |
|
Preference number: 3 (lower is better) Translates to: EPSTVVLLFCLC*FVSLLPWLPTQ Trigger: TTGGGTGGGCAGCCATGGCAACAGAGATACAAAGCAGCACAAACAAAAGAGAAGGACAACAGTGGAAGGCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076352.8 |
||
| 3UTR GCA 72 bp | TTAGAGCCTTCCACTGTTGTCCTTCTCTTTTGTTTGTaGTGCTTTGTATCTCTGTTGCCATGGCTGCCCACC | + |
|
Preference number: 3 (lower is better) Translates to: LEPSTVVLLFCL*CFVSLLPWLPT Trigger: GGTGGGCAGCCATGGCAACAGAGATACAAAGCAGCACAAACAAAAGAGAAGGACAACAGTGGAAGGCTCTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076352.8 |
||
| 3UTR GCA 72 bp | TTTGTTTGTGCTGCTTTGTATCTCTGTTGCCATGGCTaGCCACCCAAACAGTTATCTTTGATTATACTCTGG | + |
|
Preference number: 3 (lower is better) Translates to: FVCAALYLCCHG*PPKQLSLIILW Trigger: CCAGAGTATAATCAAAGATAACTGTTTGGGTGGGCAGCCATGGCAACAGAGATACAAAGCAGCACAAACAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076352.8 |
||
| 3UTR CCA 72 bp | ATTTCGTCAATATTATCTTCACAGACTGTTGTTCTCTaGTTTGTATGGGCGGCAGCAGCATTTAGAGCCTTC | + |
|
Preference number: 3 (lower is better) Translates to: ISSILSSQTVVL*FVWAAAAFRAF Trigger: GAAGGCTCTAAATGCTGCTGCCGCCCATACAAACCAGAGAACAACAGTCTGTGAAGATAATATTGACGAAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076352.8 |
||
| 3UTR CCA 72 bp | CTCTTTTGTTTGTGCTGCTTTGTATCTCTGTTGCCATaGCTGCCCACCCAAACAGTTATCTTTGATTATACT | + |
|
Preference number: 3 (lower is better) Translates to: LFCLCCFVSLLP*LPTQTVIFDYT Trigger: AGTATAATCAAAGATAACTGTTTGGGTGGGCAGCCATGGCAACAGAGATACAAAGCAGCACAAACAAAAGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076352.8 |
||
| 3UTR-3UTR CAA 90 bp | GGATTTCGTCAATATTATCTTCACAGACTGTTGTTCTCTGGTTTGTATGGGCGGCCCAAACAGTTATCTTaGATTATACTCTGGATGTTG | + |
|
Preference number: 3 (lower is better) Translates to: GFRQYYLHRLLFSGLYGRPKQLS*IILWML Trigger: CAACATCCAGAGTATAATCAAAGATAACTGTTTGGG...CCGCCCATACAAACCAGAGAACAACAGTCTGTGAAGATAATATTGACGAAATCC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076352.8 |
||
| 3UTR TCA 72 bp | GATGTTGTACTTGAAAAGCAGATTGTAATAATGATTTaGGGCTTAAGGGTATCCACGCTACCCCAGATGGAT | + |
|
Preference number: 3 (lower is better) Translates to: DVVLEKQIVIMI*GLRVSTLPQMD Trigger: ATCCATCTGGGGTAGCGTGGATACCCTTAAGCCTCAAATCATTATTACAATCTGCTTTTCAAGTACAACATC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000076352.8 |
||
| CDS-3UTR GCA 90 bp | GTATGGGCGGCAGCAGCATTTAGAGCCTTCCACTGTTGTCCTTCTCTTTTGTTTCTTAGAAAGCTGAGCTaGAGTGCTGCCTTTGGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: VWAAAAFRAFHCCPSLLFLRKLS*SAAFGP Trigger: GGGGCCAAAGGCAGCACTGCAGCTCAGCTTTCTAAG...AAACAAAAGAGAAGGACAACAGTGGAAGGCTCTAAATGCTGCTGCCGCCCATAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076352.8 |
||
| CDS-3UTR GCA 90 bp | GTATGGGCGGCAGCAGCATTTAGAGCCTTCCACTGTTGTCCTTCTCTTTTGTTTCTCTGGATCCTGACATaGCAGAGAGATCAGCCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: VWAAAAFRAFHCCPSLLFLWILT*QRDQPC Trigger: GCAAGGCTGATCTCTCTGGCATGTCAGGATCCAGAG...AAACAAAAGAGAAGGACAACAGTGGAAGGCTCTAAATGCTGCTGCCGCCCATAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076352.8 |
||
| CDS-3UTR TCA 90 bp | AGAGCCTTCCACTGTTGTCCTTCTCTTTTGTTTGTGCTGCTTTGTATCTCTGTTCTTTGGCCCCCAGAATaGCCATGGCCAAGGCAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: RAFHCCPSLLFVLLCISVLWPPE*PWPRQK Trigger: CTTCTGCCTTGGCCATGGTCATTCTGGGGGCCAAAG...AACAGAGATACAAAGCAGCACAAACAAAAGAGAAGGACAACAGTGGAAGGCTCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000076352.8 |
||
| CDS-3UTR TCA 90 bp | TGTTTGTGCTGCTTTGTATCTCTGTTGCCATGGCTGCCCACCCAAACAGTTATCGCAAGTTTCAGAGTGTaGGATGCTCCACGTTTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: CLCCFVSLLPWLPTQTVIASFRV*DAPRLL Trigger: GAGCAAACGTGGAGCATCTCACACTCTGAAACTTGC...GATAACTGTTTGGGTGGGCAGCCATGGCAACAGAGATACAAAGCAGCACAAACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076352.8 |
||
| CDS-3UTR GCA 90 bp | TGTACTCTGGAGGTCATGCAAAAGCCGAGGAGGAAAACAGGAGTCCTGCTTTCATGTTTCCTGTGGGGCTaGTTTCATTCAGGGTTTGGA | + |
|
Preference number: 4 (lower is better) Translates to: CTLEVMQKPRRKTGVLLSCFLWG*FHSGFG Trigger: TCCAAACCCTGAATGAAAGCAGCCCCACAGGAAACA...TGAAAGCAGGACTCCTGTTTTCCTCCTCGGCTTTTGCATGACCTCCAGAGTACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000076352.8 |
||
| CDS-3UTR GCA 90 bp | TACTCTGGAGGTCATGCAAAAGCCGAGGAGGAAAACAGGAGTCCTGCTTTCATTGCATCTCCAGCACCTTaGACTTCAGGTCCGAAATGT | + |
|
Preference number: 4 (lower is better) Translates to: YSGGHAKAEEENRSPAFIASPAP*TSGPKC Trigger: ACATTTCGGACCTGAAGTGCAAGGTGCTGGAGATGC...AATGAAAGCAGGACTCCTGTTTTCCTCCTCGGCTTTTGCATGACCTCCAGAGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000076352.8 |
||
| CDS-3UTR CCA 90 bp | GAGCCTTCCACTGTTGTCCTTCTCTTTTGTTTGTGCTGCTTTGTATCTCTGTTGAGGCGAAGAGGGTGTTaGCTGAACTCAGCTGCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: EPSTVVLLFCLCCFVSLLRRRGC*LNSAAP Trigger: TGGAGCAGCTGAGTTCAGCCAACACCCTCTTCGCCT...CAACAGAGATACAAAGCAGCACAAACAAAAGAGAAGGACAACAGTGGAAGGCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076352.8 |
||
| CDS-3UTR GCA 90 bp | AGGAAAACAGGAGTCCTGCTTTCATTGTACAATCAAAATAGACATACCCATGCCAAAGCTGAGCTGCAGTaGTGCCTTTGGCCCCCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: RKTGVLLSLYNQNRHTHAKAELQ*CLWPPE Trigger: TTCTGGGGGCCAAAGGCAGCACTGCAGCTCAGCTTT...GGCATGGGTATGTCTATTTTGATTGTACAATGAAAGCAGGACTCCTGTTTTCCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000076352.8 |
||
| 3UTR CAA 72 bp | CATTTAGAGCCTTCCACTGTTGTCCTTCTCTTTTGTTaGTGCTGCTTTGTATCTCTGTTGCCATGGCTGCCC | + |
|
Preference number: 4 (lower is better) Translates to: HLEPSTVVLLFC*CCFVSLLPWLP Trigger: GGGCAGCCATGGCAACAGAGATACAAAGCAGCACAAACAAAAGAGAAGGACAACAGTGGAAGGCTCTAAATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076352.8 |
||
| CDS-3UTR TCA 90 bp | GCATTTAGAGCCTTCCACTGTTGTCCTTCTCTTTTGTTTGTGCTGCTTTGTATCACGGATGGTCCACTGTaGATTCTTCCTCAGGCAACA | + |
|
Preference number: 4 (lower is better) Translates to: AFRAFHCCPSLLFVLLCITDGPL*ILPQAT Trigger: TGTTGCCTGAGGAAGAATTCACAGTGGACCATCCGT...GATACAAAGCAGCACAAACAAAAGAGAAGGACAACAGTGGAAGGCTCTAAATGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076352.8 |
||
| CDS-3UTR CCA 90 bp | AATATTATCTTCACAGACTGTTGTTCTCTGGTTTGTATGGGCGGCAGCAGCATTCTTACTCAGTCGGAATaGAGCATCCGTTGTGTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: NIIFTDCCSLVCMGGSSILTQSE*SIRCVL Trigger: GAGGACACAACGGATGCTCCATTCCGACTGAGTAAG...AATGCTGCTGCCGCCCATACAAACCAGAGAACAACAGTCTGTGAAGATAATATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076352.8 |
||
| CDS-3UTR GCA 90 bp | AGAGCCTTCCACTGTTGTCCTTCTCTTTTGTTTGTGCTGCTTTGTATCTCTGTTGTTTATCTCCTTCCTTaGATCCTCAGAGGCATGCAG | + |
|
Preference number: 4 (lower is better) Translates to: RAFHCCPSLLFVLLCISVVYLLP*ILRGMQ Trigger: CTGCATGCCTCTGAGGATGCAAGGAAGGAGATAAAC...AACAGAGATACAAAGCAGCACAAACAAAAGAGAAGGACAACAGTGGAAGGCTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076352.8 |
||
| CDS-3UTR GCA 90 bp | CTCTGGAGGTCATGCAAAAGCCGAGGAGGAAAACAGGAGTCCTGCTTTCATTGTTTAGATGTGGGATTGTaGCGAATGAAGAAAATGAAC | + |
|
Preference number: 4 (lower is better) Translates to: LWRSCKSRGGKQESCFHCLDVGL*RMKKMN Trigger: GTTCATTTTCTTCATTCGGCACAATCCCACATCTAA...ACAATGAAAGCAGGACTCCTGTTTTCCTCCTCGGCTTTTGCATGACCTCCAGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000076352.8 |
||
| CDS-3UTR CCA 90 bp | TATGGGCGGCAGCAGCATTTAGAGCCTTCCACTGTTGTCCTTCTCTTTTGTTTGGCACCATACATTTTCTaGGTTGAAGCCAAGTATTCA | + |
|
Preference number: 4 (lower is better) Translates to: YGRQQHLEPSTVVLLFCLAPYIF*VEAKYS Trigger: TGAATACTTGGCTTCAACCCAGAAAATGTATGGTGC...CAAACAAAAGAGAAGGACAACAGTGGAAGGCTCTAAATGCTGCTGCCGCCCATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000076352.8 |
||
| 3UTR CAA 72 bp | GTCCTTCTCTTTTGTTTGTGCTGCTTTGTATCTCTGTaGCCATGGCTGCCCACCCAAACAGTTATCTTTGAT | + |
|
Preference number: 4 (lower is better) Translates to: VLLFCLCCFVSL*PWLPTQTVIFD Trigger: ATCAAAGATAACTGTTTGGGTGGGCAGCCATGGCAACAGAGATACAAAGCAGCACAAACAAAAGAGAAGGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076352.8 |
||
| CDS-3UTR CCA 90 bp | TTTAGAGCCTTCCACTGTTGTCCTTCTCTTTTGTTTGTGCTGCTTTGTATCTCTCTTTCATTCAGGGTTTaGAACAGCTCCAAGGCGAAG | + |
|
Preference number: 4 (lower is better) Translates to: FRAFHCCPSLLFVLLCISLSFRV*NSSKAK Trigger: CTTCGCCTTGGAGCTGTTCCAAACCCTGAATGAAAG...AGAGATACAAAGCAGCACAAACAAAAGAGAAGGACAACAGTGGAAGGCTCTAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076352.8 |
||
| 3UTR CAA 72 bp | CTCTGTTGCCATGGCTGCCCACCCAAACAGTTATCTTaGATTATACTCTGGATGTTGTACTTGAAAAGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: LCCHGCPPKQLS*IILWMLYLKSR Trigger: TCTGCTTTTCAAGTACAACATCCAGAGTATAATCAAAGATAACTGTTTGGGTGGGCAGCCATGGCAACAGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076352.8 |
||
| 3UTR CAA 72 bp | GACCTTGGATTTCGTCAATATTATCTTCACAGACTGTaGTTCTCTGGTTTGTATGGGCGGCAGCAGCATTTA | + |
|
Preference number: 4 (lower is better) Translates to: DLGFRQYYLHRL*FSGLYGRQQHL Trigger: TAAATGCTGCTGCCGCCCATACAAACCAGAGAACAACAGTCTGTGAAGATAATATTGACGAAATCCAAGGTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076352.8 |
||
| CDS-3UTR TCA 90 bp | GGAAAACAGGAGTCCTGCTTTCATTGTACAATCAAAATAGACATACCCATGCCAAGGCAGAAGAAATGCTaGAGGGAGAGAAGAAGATGT | + |
|
Preference number: 4 (lower is better) Translates to: GKQESCFHCTIKIDIPMPRQKKC*RERRRC Trigger: ACATCTTCTTCTCTCCCTTCAGCATTTCTTCTGCCT...TGGCATGGGTATGTCTATTTTGATTGTACAATGAAAGCAGGACTCCTGTTTTCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000076352.8 |
||
| CDS-3UTR TCA 90 bp | CGAGGAGGAAAACAGGAGTCCTGCTTTCATTGTACAATCAAAATAGACATACCCATTTTCCCTTCTGTTTaGCCTTTGACCCACTGGTTT | + |
|
Preference number: 4 (lower is better) Translates to: RGGKQESCFHCTIKIDIPIFPSV*PLTHWF Trigger: AAACCAGTGGGTCAAAGGTCAAACAGAAGGGAAAAT...GGGTATGTCTATTTTGATTGTACAATGAAAGCAGGACTCCTGTTTTCCTCCTCG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000076352.8 |
||
| CDS-3UTR TCA 90 bp | TTTAGAGCCTTCCACTGTTGTCCTTCTCTTTTGTTTGTGCTGCTTTGTATCTCTTTGTGTCCTCTGTCATaGATTTCTCCTCCCACATTC | + |
|
Preference number: 4 (lower is better) Translates to: FRAFHCCPSLLFVLLCISLCPLS*ISPPTF Trigger: GAATGTGGGAGGAGAAATTCATGACAGAGGACACAA...AGAGATACAAAGCAGCACAAACAAAAGAGAAGGACAACAGTGGAAGGCTCTAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076352.8 |
||
| CDS-3UTR GCA 90 bp | CCCAAACAGTTATCTTTGATTATACTCTGGATGTTGTACTTGAAAAGCAGATTGTCCTGTAGCAGCGGCTaGCTCTGTTCCTTCCTCATT | + |
|
Preference number: 4 (lower is better) Translates to: PKQLSLIILWMLYLKSRLSCSSG*LCSFLI Trigger: AATGAGGAAGGAACAGAGGCAGCCGCTGCTACAGGA...CAATCTGCTTTTCAAGTACAACATCCAGAGTATAATCAAAGATAACTGTTTGGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076352.8 |
||
| CDS-3UTR CCA 90 bp | TATTATCTTCACAGACTGTTGTTCTCTGGTTTGTATGGGCGGCAGCAGCATTTACACAGACAACAGTTCTaGGATTTTCCCTTCTGTTTG | + |
|
Preference number: 4 (lower is better) Translates to: YYLHRLLFSGLYGRQQHLHRQQF*DFPFCL Trigger: CAAACAGAAGGGAAAATCCCAGAACTGTTGTCTGTG...TAAATGCTGCTGCCGCCCATACAAACCAGAGAACAACAGTCTGTGAAGATAATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076352.8 |
||
| CDS-3UTR TCA 90 bp | TTTAGAGCCTTCCACTGTTGTCCTTCTCTTTTGTTTGTGCTGCTTTGTATCTCTATACATTTTCTGGGTTaGAGCCAAGTATTCAGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: FRAFHCCPSLLFVLLCISIHFLG*SQVFRK Trigger: CTTCCTGAATACTTGGCTTCAACCCAGAAAATGTAT...AGAGATACAAAGCAGCACAAACAAAAGAGAAGGACAACAGTGGAAGGCTCTAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000076352.8 |
||
| CDS GCA 90 bp | TTTCCCTTCTGTTTGACCTTTGACCCACTGGTTTATCTCCTTCCTTaGATCCTCAGAGGCATGCAGAAAATCCACAGGGGCCAAGTCAGC | + |
|
Preference number: 5 (lower is better) Translates to: FPFCLTFDPLVYLLP*ILRGMQKIHRGQVS Trigger: GCTGACTTGGCCCCTGTGGATTTTCTGCATGCCTCTGAGGATGCAAGGAAGGAGATAAACCAGTGGGTCAAAGGTCAAACAGAAGGGAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000076352.8 ENSMUST00000091668.13 |
||
| CDS-3UTR CAA 90 bp | GTTGTTCTCTGGTTTGTATGGGCGGCAGCAGCATTTAGAGCCTTCCACTGTTGTGCTTTCATTCAGGGTTaGGAACAGCTCCAAGGCGAA | + |
|
Preference number: 5 (lower is better) Translates to: VVLWFVWAAAAFRAFHCCAFIQG*EQLQGE Trigger: TTCGCCTTGGAGCTGTTCCAAACCCTGAATGAAAGC...ACAACAGTGGAAGGCTCTAAATGCTGCTGCCGCCCATACAAACCAGAGAACAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076352.8 |
||
| CDS-3UTR CAA 90 bp | TATTATCTTCACAGACTGTTGTTCTCTGGTTTGTATGGGCGGCAGCAGCATTTAGCTGCAGTGCTGCCTTaGGCCCCCAGAATGACCATG | + |
|
Preference number: 5 (lower is better) Translates to: YYLHRLLFSGLYGRQQHLAAVLP*APRMTM Trigger: CATGGTCATTCTGGGGGCCAAAGGCAGCACTGCAGC...TAAATGCTGCTGCCGCCCATACAAACCAGAGAACAACAGTCTGTGAAGATAATA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000076352.8 |
||
| CDS-3UTR CAA 90 bp | CTCTGGAGGTCATGCAAAAGCCGAGGAGGAAAACAGGAGTCCTGCTTTCATTGTCCAGAGAGATCAGCCTaGCTACTGCTAAAGAGATCC | + |
|
Preference number: 5 (lower is better) Translates to: LWRSCKSRGGKQESCFHCPERSA*LLLKRS Trigger: GGATCTCTTTAGCAGTAGCAAGGCTGATCTCTCTGG...ACAATGAAAGCAGGACTCCTGTTTTCCTCCTCGGCTTTTGCATGACCTCCAGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000076352.8 |
||
| CDS-3UTR CAA 90 bp | GGAAAACAGGAGTCCTGCTTTCATTGTACAATCAAAATAGACATACCCATGCCAAAGGCGAAGAGGGTGTaGGCTGAACTCAGCTGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: GKQESCFHCTIKIDIPMPKAKRV*AELSCS Trigger: GGAGCAGCTGAGTTCAGCCAACACCCTCTTCGCCTT...TGGCATGGGTATGTCTATTTTGATTGTACAATGAAAGCAGGACTCCTGTTTTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000076352.8 |
||
| CDS-3UTR CAA 90 bp | TATTATCTTCACAGACTGTTGTTCTCTGGTTTGTATGGGCGGCAGCAGCATTTAGGTTTATCTCCTTCCTaGCATCCTCAGAGGCATGCA | + |
|
Preference number: 5 (lower is better) Translates to: YYLHRLLFSGLYGRQQHLGLSPS*HPQRHA Trigger: TGCATGCCTCTGAGGATGCAAGGAAGGAGATAAACC...TAAATGCTGCTGCCGCCCATACAAACCAGAGAACAACAGTCTGTGAAGATAATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076352.8 |
||
| CDS-3UTR CAA 90 bp | TATGGGCGGCAGCAGCATTTAGAGCCTTCCACTGTTGTCCTTCTCTTTTGTTTGTCCAAGTTCTCACGTTaGGTCCATTCAAGCAGTTTT | + |
|
Preference number: 5 (lower is better) Translates to: YGRQQHLEPSTVVLLFCLSKFSR*VHSSSF Trigger: AAAACTGCTTGAATGGACCAAACGTGAGAACTTGGA...CAAACAAAAGAGAAGGACAACAGTGGAAGGCTCTAAATGCTGCTGCCGCCCATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076352.8 |
||
| CDS TCA 90 bp | AGATGCTCCACGTTTGCTCACTTCAGCATTCAGGCTTTGGAAGCGTaGATGGATGTCCTCAACAGAGTCAAAATGAAAAGTCTTAGAAAG | + |
|
Preference number: 5 (lower is better) Translates to: RCSTFAHFSIQALEA*MDVLNRVKMKSLRK Trigger: CTTTCTAAGACTTTTCATTTTGACTCTGTTGAGGACATCCATTCACGCTTCCAAAGCCTGAATGCTGAAGTGAGCAAACGTGGAGCATCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000076352.8 ENSMUST00000091668.13 |
||
| CDS-3UTR CAA 90 bp | GTATGGGCGGCAGCAGCATTTAGAGCCTTCCACTGTTGTCCTTCTCTTTTGTTTACTTCCACAAAGGACTaGTGGACAATTTTTGATATG | + |
|
Preference number: 5 (lower is better) Translates to: VWAAAAFRAFHCCPSLLFTSTKD*WTIFDM Trigger: CATATCAAAAATTGTCCACAAGTCCTTTGTGGAAGT...AAACAAAAGAGAAGGACAACAGTGGAAGGCTCTAAATGCTGCTGCCGCCCATAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000076352.8 |
||
| CDS CCA 90 bp | ATACATCATCTTCACTGTTTTTGTGTCTTTCTTACTCAGTCGGAATaGAGCATCCGTTGTGTCCTCTGTCATGAATTTCTCCTCCCACAT | + |
|
Preference number: 5 (lower is better) Translates to: IHHLHCFCVFLTQSE*SIRCVLCHEFLLPH Trigger: ATGTGGGAGGAGAAATTCATGACAGAGGACACAACGGATGCTCCATTCCGACTGAGTAAGAAAGACACAAAAACAGTGAAGATGATGTAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000076352.8 |
||
| CDS-3UTR CAA 90 bp | AATATTATCTTCACAGACTGTTGTTCTCTGGTTTGTATGGGCGGCAGCAGCATTCATACATTTTCTGGGTaGAAGCCAAGTATTCAGGAA | + |
|
Preference number: 5 (lower is better) Translates to: NIIFTDCCSLVCMGGSSIHTFSG*KPSIQE Trigger: TTCCTGAATACTTGGCTTCAACCCAGAAAATGTATG...AATGCTGCTGCCGCCCATACAAACCAGAGAACAACAGTCTGTGAAGATAATATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076352.8 |
||
| CDS-3UTR CAA 90 bp | AATATTATCTTCACAGACTGTTGTTCTCTGGTTTGTATGGGCGGCAGCAGCATTTCATCTTCACTGTTTTaGTGTCTTTCTTACTCAGTC | + |
|
Preference number: 5 (lower is better) Translates to: NIIFTDCCSLVCMGGSSISSSLF*CLSYSV Trigger: GACTGAGTAAGAAAGACACAAAAACAGTGAAGATGA...AATGCTGCTGCCGCCCATACAAACCAGAGAACAACAGTCTGTGAAGATAATATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076352.8 |
||
| CDS GCA 72 bp | CCAGAGAGATCAGCCTTGCTACTGCTAAAGAGATCCTaGACTCCCAGGCGGCCCAGGTTAGAGTTGAGGGTA | + |
|
Preference number: 6 (lower is better) Translates to: PERSALLLLKRS*TPRRPRLELRV Trigger: TACCCTCAACTCTAACCTGGGCCGCCTGGGAGTGCAGGATCTCTTTAGCAGTAGCAAGGCTGATCTCTCTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076352.8 |
||
| CDS CAA 72 bp | AGATCTCTGGATCCTGACATGCCAGAGAGATCAGCCTaGCTACTGCTAAAGAGATCCTGCACTCCCAGGCGG | + |
|
Preference number: 6 (lower is better) Translates to: RSLDPDMPERSA*LLLKRSCTPRR Trigger: CCGCCTGGGAGTGCAGGATCTCTTTAGCAGTAGCAAGGCTGATCTCTCTGGCATGTCAGGATCCAGAGATCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076352.8 |
||
| CDS CAA 90 bp | GATATGAAAAGATCTCTGGATCCTGACATGCCAGAGAGATCAGCCTaGCTACTGCTAAAGAGATCCTGCACTCCCAGGCGGCCCAGGTTA | + |
|
Preference number: 6 (lower is better) Translates to: DMKRSLDPDMPERSA*LLLKRSCTPRRPRL Trigger: TAACCTGGGCCGCCTGGGAGTGCAGGATCTCTTTAGCAGTAGCAAGGCTGATCTCTCTGGCATGTCAGGATCCAGAGATCTTTTCATATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076352.8 |
||
| CDS GCA 72 bp | TGTTTGACCTTTGACCCACTGGTTTATCTCCTTCCTTaGATCCTCAGAGGCATGCAGAAAATCCACAGGGGC | + |
|
Preference number: 6 (lower is better) Translates to: CLTFDPLVYLLP*ILRGMQKIHRG Trigger: GCCCCTGTGGATTTTCTGCATGCCTCTGAGGATGCAAGGAAGGAGATAAACCAGTGGGTCAAAGGTCAAACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000076352.8 ENSMUST00000091668.13 |
||
| CDS GCA 72 bp | ACCCTGCCAAGGAAGAGCACATTAGATGTGGGATTGTaGCGAATGAAGAAAATGAACGGATGGTCCACTGTG | + |
|
Preference number: 6 (lower is better) Translates to: TLPRKSTLDVGL*RMKKMNGWSTV Trigger: CACAGTGGACCATCCGTTCATTTTCTTCATTCGGCACAATCCCACATCTAATGTGCTCTTCCTTGGCAGGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076352.8 |
||
| CDS TCA 72 bp | CCCACAGACAACAGTTCTGGGATTTTCCCTTCTGTTTaGCCTTTGACCCACTGGTTTATCTCCTTCCTTGCA | + |
|
Preference number: 6 (lower is better) Translates to: PTDNSSGIFPSV*PLTHWFISFLA Trigger: TGCAAGGAAGGAGATAAACCAGTGGGTCAAAGGTCAAACAGAAGGGAAAATCCCAGAACTGTTGTCTGTGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076352.8 ENSMUST00000091668.13 |
||
| CDS CCA 72 bp | GATGCTCCACGTTTGCTCACTTCAGCATTCAGGCTTTaGAAGCGTGAATGGATGTCCTCAACAGAGTCAAAA | + |
|
Preference number: 6 (lower is better) Translates to: DAPRLLTSAFRL*KREWMSSTESK Trigger: TTTTGACTCTGTTGAGGACATCCATTCACGCTTCCAAAGCCTGAATGCTGAAGTGAGCAAACGTGGAGCATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076352.8 ENSMUST00000091668.13 |
||
| CDS CAA 72 bp | CCACAGGGGCCAAGTCAGCACCATACATTTTCTGGGTaGAAGCCAAGTATTCAGGAAGGAAGTTGTAGGTTT | + |
|
Preference number: 6 (lower is better) Translates to: PQGPSQHHTFSG*KPSIQEGSCRF Trigger: AAACCTACAACTTCCTTCCTGAATACTTGGCTTCAACCCAGAAAATGTATGGTGCTGACTTGGCCCCTGTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000076352.8 ENSMUST00000091668.13 |
||
| CDS CAA 72 bp | ACCCACAGACAACAGTTCTGGGATTTTCCCTTCTGTTaGACCTTTGACCCACTGGTTTATCTCCTTCCTTGC | + |
|
Preference number: 6 (lower is better) Translates to: THRQQFWDFPFC*TFDPLVYLLPC Trigger: GCAAGGAAGGAGATAAACCAGTGGGTCAAAGGTCAAACAGAAGGGAAAATCCCAGAACTGTTGTCTGTGGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076352.8 ENSMUST00000091668.13 |
||
| CDS CAA 72 bp | CAAACCCTGCCAAGGAAGAGCACATTAGATGTGGGATaGTGCCGAATGAAGAAAATGAACGGATGGTCCACT | + |
|
Preference number: 6 (lower is better) Translates to: QTLPRKSTLDVG*CRMKKMNGWST Trigger: AGTGGACCATCCGTTCATTTTCTTCATTCGGCACAATCCCACATCTAATGTGCTCTTCCTTGGCAGGGTTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076352.8 |
||
| CDS TCA 72 bp | TTCTCTCCATACAGTCTGTTAGCAAGTTTCAGAGTGTaGGATGCTCCACGTTTGCTCACTTCAGCATTCAGG | + |
|
Preference number: 6 (lower is better) Translates to: FSPYSLLASFRV*DAPRLLTSAFR Trigger: CCTGAATGCTGAAGTGAGCAAACGTGGAGCATCTCACACTCTGAAACTTGCTAACAGACTGTATGGAGAGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076352.8 ENSMUST00000091668.13 |
||
| CDS GCA 72 bp | TCCATACAGTCTGTTAGCAAGTTTCAGAGTGTGAGATaGTCCACGTTTGCTCACTTCAGCATTCAGGCTTTG | + |
|
Preference number: 6 (lower is better) Translates to: SIQSVSKFQSVR*STFAHFSIQAL Trigger: CAAAGCCTGAATGCTGAAGTGAGCAAACGTGGAGCATCTCACACTCTGAAACTTGCTAACAGACTGTATGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076352.8 ENSMUST00000091668.13 |
||
| CDS CCA 72 bp | GATGTGGGATTGTGCCGAATGAAGAAAATGAACGGATaGTCCACTGTGAATTCTTCCTCAGGCAACAACATA | + |
|
Preference number: 6 (lower is better) Translates to: DVGLCRMKKMNG*STVNSSSGNNI Trigger: TATGTTGTTGCCTGAGGAAGAATTCACAGTGGACCATCCGTTCATTTTCTTCATTCGGCACAATCCCACATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076352.8 |
||
| CDS CCA 72 bp | CTTCACTGTTTTTGTGTCTTTCTTACTCAGTCGGAATaGAGCATCCGTTGTGTCCTCTGTCATGAATTTCTC | + |
|
Preference number: 6 (lower is better) Translates to: LHCFCVFLTQSE*SIRCVLCHEFL Trigger: GAGAAATTCATGACAGAGGACACAACGGATGCTCCATTCCGACTGAGTAAGAAAGACACAAAAACAGTGAAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000076352.8 |
||