Pregenerated sensors for SERPINB13 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000048775Ensembl transcript IDs: ENSMUST00000027564.8, ENSMUST00000136766.2
Found 59 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GTCTCCTCCACCTGCAAGCGGGGCAGGCGCAGGTCCACCCTCCTTTaGTCCAGGTGTCCGGGGCTGGTCCACTCCACCAACTTCTCAGGA | + |
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Preference number: 1 (lower is better) Translates to: VSSTCKRGRRRSTLL*SRCPGLVHSTNFSG Trigger: TCCTGAGAAGTTGGTGGAGTGGACCAGCCCCGGACACCTGGAGCAAAGGAGGGTGGACCTGCGCCTGCCCCGCTTGCAGGTGGAGGAGAC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000136766.2 |
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| 3UTR TCA 90 bp | GAACAAGAATGGATGGTTACAGTGCACAAGCTCACAGCTTGCAGCTaGCGAGACCTTGAGGCCCACTCCAGTGCCTGCAGTGGCCTCAAC | + |
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Preference number: 1 (lower is better) Translates to: EQEWMVTVHKLTACS*RDLEAHSSACSGLN Trigger: GTTGAGGCCACTGCAGGCACTGGAGTGGGCCTCAAGGTCTCGTCAGCTGCAAGCTGTGAGCTTGTGCACTGTAACCATCCATTCTTGTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136766.2 |
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| 3UTR-3UTR GCA 90 bp | CACGGGTTCCAGATCATAGGTCTCCTCCACCTGCAAGCGGGGCAGGCGCAGGTCCCCACAATTTTCGCCTaGAGGTCCTCTAAGAAGGTG | + |
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Preference number: 2 (lower is better) Translates to: HGFQIIGLLHLQAGQAQVPTIFA*RSSKKV Trigger: CACCTTCTTAGAGGACCTGCAGGCGAAAATTGTGGG...GACCTGCGCCTGCCCCGCTTGCAGGTGGAGGAGACCTATGATCTGGAACCCGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000136766.2 |
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| 3UTR-3UTR CCA 90 bp | CACGGGTTCCAGATCATAGGTCTCCTCCACCTGCAAGCGGGGCAGGCGCAGGTCTTAGCACCAGCTTGGTaGAGCTGTTCAAAGAGCCTT | + |
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Preference number: 2 (lower is better) Translates to: HGFQIIGLLHLQAGQAQVLAPAW*SCSKSL Trigger: AAGGCTCTTTGAACAGCTCCACCAAGCTGGTGCTAA...GACCTGCGCCTGCCCCGCTTGCAGGTGGAGGAGACCTATGATCTGGAACCCGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136766.2 |
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| 3UTR CAA 90 bp | GGAATCCCCACAATTTTCGCCTGCAGGTCCTCTAAGAAGGTGAAGTaGAAGGAGCTGCACAGAGCCATCATCTGCACAGGTTTACTTAGG | + |
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Preference number: 2 (lower is better) Translates to: GIPTIFACRSSKKVK*KELHRAIICTGLLR Trigger: CCTAAGTAAACCTGTGCAGATGATGGCTCTGTGCAGCTCCTTCAACTTCACCTTCTTAGAGGACCTGCAGGCGAAAATTGTGGGGATTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000136766.2 |
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| 3UTR-3UTR TCA 90 bp | ATTTTCGCCTGCAGGTCCTCTAAGAAGGTGAAGTTGAAGGAGCTGCACAGAGCCTGGTCTGTCAACTCTTaGGTGCTACTTAGTGCTCTA | + |
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Preference number: 2 (lower is better) Translates to: IFACRSSKKVKLKELHRAWSVNS*VLLSAL Trigger: TAGAGCACTAAGTAGCACTCAAGAGTTGACAGACCA...GGCTCTGTGCAGCTCCTTCAACTTCACCTTCTTAGAGGACCTGCAGGCGAAAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136766.2 |
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| 3UTR-3UTR CCA 90 bp | TGTCTGATGAAGAACAAGAATGGATGGTTACAGTGCACAAGCTCACAGCTTGCATTATTAGCACCAGCTTaGTGGAGCTGTTCAAAGAGC | + |
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Preference number: 2 (lower is better) Translates to: CLMKNKNGWLQCTSSQLALLAPA*WSCSKS Trigger: GCTCTTTGAACAGCTCCACCAAGCTGGTGCTAATAA...TGCAAGCTGTGAGCTTGTGCACTGTAACCATCCATTCTTGTTCTTCATCAGACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136766.2 |
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| 3UTR CAA 90 bp | AACAGATTAAGAAAACGTGCTATTGCTACCATTGTGCAAAGGACTTaGAAGCACAAATATGAACCCCATGGTCTGTCAACTCTTGAGTGC | + |
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Preference number: 2 (lower is better) Translates to: NRLRKRAIATIVQRT*KHKYEPHGLSTLEC Trigger: GCACTCAAGAGTTGACAGACCATGGGGTTCATATTTGTGCTTCAAAGTCCTTTGCACAATGGTAGCAATAGCACGTTTTCTTAATCTGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027564.8 |
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| 3UTR TCA 72 bp | AGTGCACAAGCTCACAGCTTGCAGCTGACGAGACCTTaGGGCCCACTCCAGTGCCTGCAGTGGCCTCAACGC | + |
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Preference number: 3 (lower is better) Translates to: SAQAHSLQLTRP*GPLQCLQWPQR Trigger: GCGTTGAGGCCACTGCAGGCACTGGAGTGGGCCTCAAGGTCTCGTCAGCTGCAAGCTGTGAGCTTGTGCACT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136766.2 |
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| 3UTR GCA 72 bp | TCAACGCCTTCCTCTGTCACCACCAGGAACGATCTGTaGAGGAAATTCTGGGCATGCAGCCCAGAGCGCGCC | + |
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Preference number: 3 (lower is better) Translates to: STPSSVTTRNDL*RKFWACSPERA Trigger: GGCGCGCTCTGGGCTGCATGCCCAGAATTTCCTGCACAGATCGTTCCTGGTGGTGACAGAGGAAGGCGTTGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136766.2 |
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| 3UTR-3UTR CAA 90 bp | CTTCCAGCACGGGTTCCAGATCATAGGTCTCCTCCACCTGCAAGCGGGGCAGGCTCTAAGAAGGTGAAGTaGAAGGAGCTGCACAGAGCC | + |
|
Preference number: 3 (lower is better) Translates to: LPARVPDHRSPPPASGAGSKKVK*KELHRA Trigger: GGCTCTGTGCAGCTCCTTCAACTTCACCTTCTTAGA...GCCTGCCCCGCTTGCAGGTGGAGGAGACCTATGATCTGGAACCCGTGCTGGAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136766.2 |
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| 3UTR CCA 72 bp | TCTGTCACCACCAGGAACGATCTGTGCAGGAAATTCTaGGCATGCAGCCCAGAGCGCGCCGACATTCCTGAG | + |
|
Preference number: 3 (lower is better) Translates to: SVTTRNDLCRKF*ACSPERADIPE Trigger: CTCAGGAATGTCGGCGCGCTCTGGGCTGCATGCCCAGAATTTCCTGCACAGATCGTTCCTGGTGGTGACAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136766.2 |
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| 3UTR TCA 72 bp | TGGATGGTTACAGTGCACAAGCTCACAGCTTGCAGCTaGCGAGACCTTGAGGCCCACTCCAGTGCCTGCAGT | + |
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Preference number: 3 (lower is better) Translates to: WMVTVHKLTACS*RDLEAHSSACS Trigger: ACTGCAGGCACTGGAGTGGGCCTCAAGGTCTCGTCAGCTGCAAGCTGTGAGCTTGTGCACTGTAACCATCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136766.2 |
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| 3UTR CCA 72 bp | GCAGGTCCACCCTCCTTTGCTCCAGGTGTCCGGGGCTaGTCCACTCCACCAACTTCTCAGGAGACATTTTAT | + |
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Preference number: 3 (lower is better) Translates to: AGPPSFAPGVRG*STPPTSQETFY Trigger: ATAAAATGTCTCCTGAGAAGTTGGTGGAGTGGACCAGCCCCGGACACCTGGAGCAAAGGAGGGTGGACCTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000136766.2 |
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| 3UTR-3UTR CAA 90 bp | GCAGGCGCAGGTCCACCCTCCTTTGCTCCAGGTGTCCGGGGCTGGTCCACTCCAAACATGCTGATATCGTaGTTTTTATATGGAATCCCC | + |
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Preference number: 3 (lower is better) Translates to: AGAGPPSFAPGVRGWSTPNMLIS*FLYGIP Trigger: GGGGATTCCATATAAAAACAACGATATCAGCATGTT...TGGAGTGGACCAGCCCCGGACACCTGGAGCAAAGGAGGGTGGACCTGCGCCTGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000136766.2 |
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| 3UTR GCA 72 bp | AAGGTGAAGTTGAAGGAGCTGCACAGAGCCATCATCTaGACAGGTTTACTTAGGTTCTTATTCAGCCAGAAG | + |
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Preference number: 3 (lower is better) Translates to: KVKLKELHRAII*TGLLRFLFSQK Trigger: CTTCTGGCTGAATAAGAACCTAAGTAAACCTGTGCAGATGATGGCTCTGTGCAGCTCCTTCAACTTCACCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136766.2 |
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| 3UTR TCA 72 bp | GAAAACGTGCTATTGCTACCATTGTGCAAAGGACTTTaGAGCACAAATATGAACCCCATGGTCTGTCAACTC | + |
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Preference number: 3 (lower is better) Translates to: ENVLLLPLCKGL*STNMNPMVCQL Trigger: GAGTTGACAGACCATGGGGTTCATATTTGTGCTTCAAAGTCCTTTGCACAATGGTAGCAATAGCACGTTTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027564.8 |
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| 3UTR-3UTR CAA 90 bp | GACATTTTATCCATTATCTTCTCCAGACCATCTATGTCATTGGGCAGAAGCACATCTGGAAACAGGTCCTaGACTTTTATTGAAGGAAGA | + |
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Preference number: 3 (lower is better) Translates to: DILSIIFSRPSMSLGRSTSGNRS*TFIEGR Trigger: TCTTCCTTCAATAAAAGTCAAGGACCTGTTTCCAGA...TGTGCTTCTGCCCAATGACATAGATGGTCTGGAGAAGATAATGGATAAAATGTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000136766.2 |
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| 3UTR TCA 72 bp | GACCATCTATGTCATTGGGCAGAAGCACAAACATGCTaGTATCGTTGTTTTTATATGGAATCCCCACAATTT | + |
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Preference number: 3 (lower is better) Translates to: DHLCHWAEAQTC*YRCFYMESPQF Trigger: AAATTGTGGGGATTCCATATAAAAACAACGATATCAGCATGTTTGTGCTTCTGCCCAATGACATAGATGGTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000136766.2 |
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| 3UTR CAA 72 bp | CACCTGCAAGCGGGGCAGGCGCAGGTCCACCCTCCTTaGCTCCAGGTGTCCGGGGCTGGTCCACTCCACCAA | + |
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Preference number: 4 (lower is better) Translates to: HLQAGQAQVHPP*LQVSGAGPLHQ Trigger: TTGGTGGAGTGGACCAGCCCCGGACACCTGGAGCAAAGGAGGGTGGACCTGCGCCTGCCCCGCTTGCAGGTG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000136766.2 |
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| CDS-3UTR TCA 90 bp | CTTCCAGCACGGGTTCCAGATCATAGGTCTCCTCCACCTGCAAGCGGGGCAGGCCTCGGGTCCCCAGGATaGTCATGCCAATGGCTGTTG | + |
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Preference number: 4 (lower is better) Translates to: LPARVPDHRSPPPASGAGLGSPG*SCQWLL Trigger: CAACAGCCATTGGCATGATCATCCTGGGGACCCGAG...GCCTGCCCCGCTTGCAGGTGGAGGAGACCTATGATCTGGAACCCGTGCTGGAAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000136766.2 |
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| 3UTR CAA 72 bp | CAGTGCACAAGCTCACAGCTTGCAGCTGACGAGACCTaGAGGCCCACTCCAGTGCCTGCAGTGGCCTCAACG | + |
|
Preference number: 4 (lower is better) Translates to: QCTSSQLAADET*RPTPVPAVAST Trigger: CGTTGAGGCCACTGCAGGCACTGGAGTGGGCCTCAAGGTCTCGTCAGCTGCAAGCTGTGAGCTTGTGCACTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136766.2 |
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| CDS-3UTR GCA 90 bp | CCAGCACGGGTTCCAGATCATAGGTCTCCTCCACCTGCAAGCGGGGCAGGCGCACAATGGCTGTTGAGATaGCCACAGGGGAAAAGAAGA | + |
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Preference number: 4 (lower is better) Translates to: PARVPDHRSPPPASGAGAQWLLR*PQGKRR Trigger: TCTTCTTTTCCCCTGTGGGCATCTCAACAGCCATTG...TGCGCCTGCCCCGCTTGCAGGTGGAGGAGACCTATGATCTGGAACCCGTGCTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000136766.2 |
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| CDS-3UTR CCA 90 bp | TGCAGGTCCTCTAAGAAGGTGAAGTTGAAGGAGCTGCACAGAGCCATCATCTGCGTAACTCAGAAGCAGTaGCTCCTCGGGTCCCCAGGA | + |
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Preference number: 4 (lower is better) Translates to: CRSSKKVKLKELHRAIICVTQKQ*LLGSPG Trigger: TCCTGGGGACCCGAGGAGCCACTGCTTCTGAGTTAC...GCAGATGATGGCTCTGTGCAGCTCCTTCAACTTCACCTTCTTAGAGGACCTGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136766.2 |
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| CDS-3UTR TCA 90 bp | AAGCACAAATATGAACCCCATGGTCTGTCAACTCTTGAGTGCTACTTAGTGCTCCAGCTGACGAGACCTTaGGGCCCACTCCAGTGCCTG | + |
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Preference number: 4 (lower is better) Translates to: KHKYEPHGLSTLECYLVLQLTRP*GPLQCL Trigger: CAGGCACTGGAGTGGGCCTCAAGGTCTCGTCAGCTG...GAGCACTAAGTAGCACTCAAGAGTTGACAGACCATGGGGTTCATATTTGTGCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027564.8 |
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| CDS-3UTR GCA 90 bp | TTGAAGGAAAACAAGATAAGAACTGATCTTAAGCTGCCTGGCCTCCTGAGTAGTAGGTCCACCCTCCTTTaGTCCAGGTGTCCGGGGCTG | + |
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Preference number: 4 (lower is better) Translates to: LKENKIRTDLKLPGLLSSRSTLL*SRCPGL Trigger: CAGCCCCGGACACCTGGAGCAAAGGAGGGTGGACCT...ACTACTCAGGAGGCCAGGCAGCTTAAGATCAGTTCTTATCTTGTTTTCCTTCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027564.8 |
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| CDS-3UTR TCA 90 bp | AAGCACAAATATGAACCCCATGGTCTGTCAACTCTTGAGTGCTACTTAGTGCTCTCGCTGAAGGCACTGTaGATGCCCACAGCTTCCAGC | + |
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Preference number: 4 (lower is better) Translates to: KHKYEPHGLSTLECYLVLSLKAL*MPTASS Trigger: GCTGGAAGCTGTGGGCATTCACAGTGCCTTCAGCGA...GAGCACTAAGTAGCACTCAAGAGTTGACAGACCATGGGGTTCATATTTGTGCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027564.8 |
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| CDS-3UTR GCA 90 bp | TTGAAGGAAAACAAGATAAGAACTGATCTTAAGCTGCCTGGCCTCCTGAGTAGTAGGAAATTCTGGGCATaGAGCCCAGAGCGCGCCGAC | + |
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Preference number: 4 (lower is better) Translates to: LKENKIRTDLKLPGLLSSRKFWA*SPERAD Trigger: GTCGGCGCGCTCTGGGCTGCATGCCCAGAATTTCCT...ACTACTCAGGAGGCCAGGCAGCTTAAGATCAGTTCTTATCTTGTTTTCCTTCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027564.8 |
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| 3UTR CAA 72 bp | ACAATTTTCGCCTGCAGGTCCTCTAAGAAGGTGAAGTaGAAGGAGCTGCACAGAGCCATCATCTGCACAGGT | + |
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Preference number: 4 (lower is better) Translates to: TIFACRSSKKVK*KELHRAIICTG Trigger: ACCTGTGCAGATGATGGCTCTGTGCAGCTCCTTCAACTTCACCTTCTTAGAGGACCTGCAGGCGAAAATTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136766.2 |
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| CDS-3UTR TCA 90 bp | CGTGCTATTGCTACCATTGTGCAAAGGACTTTGAAGCACAAATATGAACCCCATCTCGGGTCCCCAGGATaGTCATGCCAATGGCTGTTG | + |
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Preference number: 4 (lower is better) Translates to: RAIATIVQRTLKHKYEPHLGSPG*SCQWLL Trigger: CAACAGCCATTGGCATGATCATCCTGGGGACCCGAG...ATGGGGTTCATATTTGTGCTTCAAAGTCCTTTGCACAATGGTAGCAATAGCACG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027564.8 |
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| CDS-3UTR CCA 90 bp | TTGAAGGAAAACAAGATAAGAACTGATCTTAAGCTGCCTGGCCTCCTGAGTAGTGTAACTCAGAAGCAGTaGCTCCTCGGGTCCCCAGGA | + |
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Preference number: 4 (lower is better) Translates to: LKENKIRTDLKLPGLLSSVTQKQ*LLGSPG Trigger: TCCTGGGGACCCGAGGAGCCACTGCTTCTGAGTTAC...ACTACTCAGGAGGCCAGGCAGCTTAAGATCAGTTCTTATCTTGTTTTCCTTCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027564.8 |
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| CDS-3UTR TCA 90 bp | CGTGCTATTGCTACCATTGTGCAAAGGACTTTGAAGCACAAATATGAACCCCATCATGCCAATGGCTGTTaGGATGCCCACAGGGGAAAA | + |
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Preference number: 4 (lower is better) Translates to: RAIATIVQRTLKHKYEPHHANGC*DAHRGK Trigger: TTTTCCCCTGTGGGCATCTCAACAGCCATTGGCATG...ATGGGGTTCATATTTGTGCTTCAAAGTCCTTTGCACAATGGTAGCAATAGCACG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027564.8 |
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| CDS-3UTR GCA 90 bp | ATTTTCGCCTGCAGGTCCTCTAAGAAGGTGAAGTTGAAGGAGCTGCACAGAGCCTTCTCGAGCTTTCTGTaGCTTGTTCAGTGTAAAGTA | + |
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Preference number: 4 (lower is better) Translates to: IFACRSSKKVKLKELHRAFSSFL*LVQCKV Trigger: TACTTTACACTGAACAAGGCACAGAAAGCTCGAGAA...GGCTCTGTGCAGCTCCTTCAACTTCACCTTCTTAGAGGACCTGCAGGCGAAAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136766.2 |
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| CDS-3UTR CCA 90 bp | CTGGTCCACTCCACCAACTTCTCAGGAGACATTTTATCCATTATCTTCTCCAGACAAACAGGAACTGTGTaGCTGCTGTGCCTAGTGAGT | + |
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Preference number: 4 (lower is better) Translates to: LVHSTNFSGDILSIIFSRQTGTV*LLCLVS Trigger: ACTCACTAGGCACAGCAGCCACACAGTTCCTGTTTG...TCTGGAGAAGATAATGGATAAAATGTCTCCTGAGAAGTTGGTGGAGTGGACCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136766.2 |
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| CDS-3UTR GCA 90 bp | AAGCACAAATATGAACCCCATGGTCTGTCAACTCTTGAGTGCTACTTAGTGCTCCAATGGCTGTTGAGATaGCCACAGGGGAAAAGAAGA | + |
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Preference number: 4 (lower is better) Translates to: KHKYEPHGLSTLECYLVLQWLLR*PQGKRR Trigger: TCTTCTTTTCCCCTGTGGGCATCTCAACAGCCATTG...GAGCACTAAGTAGCACTCAAGAGTTGACAGACCATGGGGTTCATATTTGTGCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000027564.8 ENSMUST00000136766.2 |
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| CDS-3UTR CCA 90 bp | ATTGCTACCATTGTGCAAAGGACTTTGAAGCACAAATATGAACCCCATGGTCTGCAAACAGGAACTGTGTaGCTGCTGTGCCTAGTGAGT | + |
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Preference number: 4 (lower is better) Translates to: IATIVQRTLKHKYEPHGLQTGTV*LLCLVS Trigger: ACTCACTAGGCACAGCAGCCACACAGTTCCTGTTTG...CAGACCATGGGGTTCATATTTGTGCTTCAAAGTCCTTTGCACAATGGTAGCAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027564.8 |
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| CDS-3UTR TCA 90 bp | CATTTTATCCATTATCTTCTCCAGACCATCTATGTCATTGGGCAGAAGCACAAACATGCCAATGGCTGTTaGGATGCCCACAGGGGAAAA | + |
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Preference number: 4 (lower is better) Translates to: HFIHYLLQTIYVIGQKHKHANGC*DAHRGK Trigger: TTTTCCCCTGTGGGCATCTCAACAGCCATTGGCATG...TTTGTGCTTCTGCCCAATGACATAGATGGTCTGGAGAAGATAATGGATAAAATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000136766.2 |
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| CDS-3UTR CCA 90 bp | ATTGCTACCATTGTGCAAAGGACTTTGAAGCACAAATATGAACCCCATGGTCTGTTAGCACCAGCTTGGTaGAGCTGTTCAAAGAGCCTT | + |
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Preference number: 4 (lower is better) Translates to: IATIVQRTLKHKYEPHGLLAPAW*SCSKSL Trigger: AAGGCTCTTTGAACAGCTCCACCAAGCTGGTGCTAA...CAGACCATGGGGTTCATATTTGTGCTTCAAAGTCCTTTGCACAATGGTAGCAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027564.8 |
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| CDS-3UTR CCA 90 bp | ATTAAGAAAACGTGCTATTGCTACCATTGTGCAAAGGACTTTGAAGCACAAATACTGTGCAGGAAATTCTaGGCATGCAGCCCAGAGCGC | + |
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Preference number: 4 (lower is better) Translates to: IKKTCYCYHCAKDFEAQILCRKF*ACSPER Trigger: GCGCTCTGGGCTGCATGCCCAGAATTTCCTGCACAG...TATTTGTGCTTCAAAGTCCTTTGCACAATGGTAGCAATAGCACGTTTTCTTAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027564.8 |
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| CDS-3UTR GCA 90 bp | CGTGCTATTGCTACCATTGTGCAAAGGACTTTGAAGCACAAATATGAACCCCATAATGGATGGTTACAGTaGACAAGCTCACAGCTTGCA | + |
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Preference number: 4 (lower is better) Translates to: RAIATIVQRTLKHKYEPHNGWLQ*TSSQLA Trigger: TGCAAGCTGTGAGCTTGTGCACTGTAACCATCCATT...ATGGGGTTCATATTTGTGCTTCAAAGTCCTTTGCACAATGGTAGCAATAGCACG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027564.8 |
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| CDS-3UTR GCA 90 bp | ATTGCTACCATTGTGCAAAGGACTTTGAAGCACAAATATGAACCCCATGGTCTGTGCCGAAAAAGAGAATaGTGTCAGACTCTCTGTGTC | + |
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Preference number: 4 (lower is better) Translates to: IATIVQRTLKHKYEPHGLCRKRE*CQTLCV Trigger: GACACAGAGAGTCTGACAGCATTCTCTTTTTCGGCA...CAGACCATGGGGTTCATATTTGTGCTTCAAAGTCCTTTGCACAATGGTAGCAAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027564.8 |
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| CDS-3UTR CCA 90 bp | CGTGCTATTGCTACCATTGTGCAAAGGACTTTGAAGCACAAATATGAACCCCATTTATTAGCACCAGCTTaGTGGAGCTGTTCAAAGAGC | + |
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Preference number: 4 (lower is better) Translates to: RAIATIVQRTLKHKYEPHLLAPA*WSCSKS Trigger: GCTCTTTGAACAGCTCCACCAAGCTGGTGCTAATAA...ATGGGGTTCATATTTGTGCTTCAAAGTCCTTTGCACAATGGTAGCAATAGCACG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027564.8 |
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| CDS-3UTR TCA 90 bp | CGTGCTATTGCTACCATTGTGCAAAGGACTTTGAAGCACAAATATGAACCCCATCTGGAAACAGGTCCTTaGCTTTTACATTTGTTTGGC | + |
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Preference number: 4 (lower is better) Translates to: RAIATIVQRTLKHKYEPHLETGP*LLHLFG Trigger: GCCAAACAAATGTAAAAGTCAAGGACCTGTTTCCAG...ATGGGGTTCATATTTGTGCTTCAAAGTCCTTTGCACAATGGTAGCAATAGCACG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027564.8 |
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| CDS-3UTR GCA 90 bp | TTGAAGGAAAACAAGATAAGAACTGATCTTAAGCTGCCTGGCCTCCTGAGTAGTTTCTCGAGCTTTCTGTaGCTTGTTCAGTGTAAAGTA | + |
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Preference number: 4 (lower is better) Translates to: LKENKIRTDLKLPGLLSSFSSFL*LVQCKV Trigger: TACTTTACACTGAACAAGGCACAGAAAGCTCGAGAA...ACTACTCAGGAGGCCAGGCAGCTTAAGATCAGTTCTTATCTTGTTTTCCTTCAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027564.8 |
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| CDS-3UTR GCA 90 bp | AAGCACAAATATGAACCCCATGGTCTGTCAACTCTTGAGTGCTACTTAGTGCTCAACAGGCTCCAGAGATaGATGGTAATATTTTTCAAC | + |
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Preference number: 4 (lower is better) Translates to: KHKYEPHGLSTLECYLVLNRLQR*MVIFFN Trigger: GTTGAAAAATATTACCATGCATCTCTGGAGCCTGTT...GAGCACTAAGTAGCACTCAAGAGTTGACAGACCATGGGGTTCATATTTGTGCTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027564.8 |
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| CDS-3UTR GCA 90 bp | ATTAAGAAAACGTGCTATTGCTACCATTGTGCAAAGGACTTTGAAGCACAAATACCCACAATTTTCGCCTaGAGGTCCTCTAAGAAGGTG | + |
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Preference number: 4 (lower is better) Translates to: IKKTCYCYHCAKDFEAQIPTIFA*RSSKKV Trigger: CACCTTCTTAGAGGACCTGCAGGCGAAAATTGTGGG...TATTTGTGCTTCAAAGTCCTTTGCACAATGGTAGCAATAGCACGTTTTCTTAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027564.8 |
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| CDS-3UTR CCA 90 bp | CACTCCACCAACTTCTCAGGAGACATTTTATCCATTATCTTCTCCAGACCATCTAAACTCAAGTCCAAATaGATCAAAGACCTCAACATA | + |
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Preference number: 4 (lower is better) Translates to: HSTNFSGDILSIIFSRPSKLKSK*IKDLNI Trigger: TATGTTGAGGTCTTTGATCCATTTGGACTTGAGTTT...AGATGGTCTGGAGAAGATAATGGATAAAATGTCTCCTGAGAAGTTGGTGGAGTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136766.2 |
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| CDS-3UTR CAA 90 bp | GTCTCCTCCACCTGCAAGCGGGGCAGGCGCAGGTCCACCCTCCTTTGCTCCAGGTCATGCCAATGGCTGTaGAGATGCCCACAGGGGAAA | + |
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Preference number: 5 (lower is better) Translates to: VSSTCKRGRRRSTLLCSRSCQWL*RCPQGK Trigger: TTTCCCCTGTGGGCATCTCAACAGCCATTGGCATGA...CCTGGAGCAAAGGAGGGTGGACCTGCGCCTGCCCCGCTTGCAGGTGGAGGAGAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000136766.2 |
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| CDS-3UTR CAA 90 bp | CACGGGTTCCAGATCATAGGTCTCCTCCACCTGCAAGCGGGGCAGGCGCAGGTCCAACAGCATTTGGAGTaGATGATGTATTTCTTCTCT | + |
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Preference number: 5 (lower is better) Translates to: HGFQIIGLLHLQAGQAQVQQHLE*MMYFFS Trigger: AGAGAAGAAATACATCATCAACTCCAAATGCTGTTG...GACCTGCGCCTGCCCCGCTTGCAGGTGGAGGAGACCTATGATCTGGAACCCGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136766.2 |
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| CDS-3UTR CAA 90 bp | TTGAAGGAAAACAAGATAAGAACTGATCTTAAGCTGCCTGGCCTCCTGAGTAGTGCAGCTGACGAGACCTaGAGGCCCACTCCAGTGCCT | + |
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Preference number: 5 (lower is better) Translates to: LKENKIRTDLKLPGLLSSAADET*RPTPVP Trigger: AGGCACTGGAGTGGGCCTCAAGGTCTCGTCAGCTGC...ACTACTCAGGAGGCCAGGCAGCTTAAGATCAGTTCTTATCTTGTTTTCCTTCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027564.8 |
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| CDS-3UTR CAA 90 bp | TTGAAGGAAAACAAGATAAGAACTGATCTTAAGCTGCCTGGCCTCCTGAGTAGTTCATGCCAATGGCTGTaGAGATGCCCACAGGGGAAA | + |
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Preference number: 5 (lower is better) Translates to: LKENKIRTDLKLPGLLSSSCQWL*RCPQGK Trigger: TTTCCCCTGTGGGCATCTCAACAGCCATTGGCATGA...ACTACTCAGGAGGCCAGGCAGCTTAAGATCAGTTCTTATCTTGTTTTCCTTCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027564.8 |
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| CDS-3UTR CAA 90 bp | ATTGCTACCATTGTGCAAAGGACTTTGAAGCACAAATATGAACCCCATGGTCTGTCTAAGAAGGTGAAGTaGAAGGAGCTGCACAGAGCC | + |
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Preference number: 5 (lower is better) Translates to: IATIVQRTLKHKYEPHGLSKKVK*KELHRA Trigger: GGCTCTGTGCAGCTCCTTCAACTTCACCTTCTTAGA...CAGACCATGGGGTTCATATTTGTGCTTCAAAGTCCTTTGCACAATGGTAGCAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027564.8 |
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| CDS CCA 90 bp | TTTCTTCTCTCTTCTCGATCCCCCTGCACAAAACTCAAGTCCAAATaGATCAAAGACCTCAACATAAAGCCAGATACACTGAACCTCTTC | + |
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Preference number: 5 (lower is better) Translates to: FLLSSRSPCTKLKSK*IKDLNIKPDTLNLF Trigger: GAAGAGGTTCAGTGTATCTGGCTTTATGTTGAGGTCTTTGATCCATTTGGACTTGAGTTTTGTGCAGGGGGATCGAGAAGAGAGAAGAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000136766.2 |
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| CDS-3UTR CAA 90 bp | AAGCACAAATATGAACCCCATGGTCTGTCAACTCTTGAGTGCTACTTAGTGCTCTCTGGAAACAGGTCCTaGACTTTTACATTTGTTTGG | + |
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Preference number: 5 (lower is better) Translates to: KHKYEPHGLSTLECYLVLSGNRS*TFTFVW Trigger: CCAAACAAATGTAAAAGTCAAGGACCTGTTTCCAGA...GAGCACTAAGTAGCACTCAAGAGTTGACAGACCATGGGGTTCATATTTGTGCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027564.8 |
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| CDS GCA 90 bp | GCATTTGGAGTTGATGATGTATTTCTTCTCTCTTCTCGATCCCCCTaGACAAAACTCAAGTCCAAATGGATCAAAGACCTCAACATAAAG | + |
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Preference number: 5 (lower is better) Translates to: AFGVDDVFLLSSRSP*TKLKSKWIKDLNIK Trigger: CTTTATGTTGAGGTCTTTGATCCATTTGGACTTGAGTTTTGTGCAGGGGGATCGAGAAGAGAGAAGAAATACATCATCAACTCCAAATGC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000136766.2 |
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| CDS-3UTR CAA 90 bp | AAGCACAAATATGAACCCCATGGTCTGTCAACTCTTGAGTGCTACTTAGTGCTCTTCAGTCAACAGCATTaGGAGTTGATGATGTATTTC | + |
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Preference number: 5 (lower is better) Translates to: KHKYEPHGLSTLECYLVLFSQQH*ELMMYF Trigger: GAAATACATCATCAACTCCAAATGCTGTTGACTGAA...GAGCACTAAGTAGCACTCAAGAGTTGACAGACCATGGGGTTCATATTTGTGCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027564.8 |
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| CDS-3UTR CAA 90 bp | AAGCACAAATATGAACCCCATGGTCTGTCAACTCTTGAGTGCTACTTAGTGCTCAACATGCTGATATCGTaGTTTTTATATGGAATCCCC | + |
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Preference number: 5 (lower is better) Translates to: KHKYEPHGLSTLECYLVLNMLIS*FLYGIP Trigger: GGGGATTCCATATAAAAACAACGATATCAGCATGTT...GAGCACTAAGTAGCACTCAAGAGTTGACAGACCATGGGGTTCATATTTGTGCTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027564.8 |
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| CDS-3UTR CAA 90 bp | ATTAAGAAAACGTGCTATTGCTACCATTGTGCAAAGGACTTTGAAGCACAAATACAACAGCATTTGGAGTaGATGATGTATTTCTTCTCT | + |
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Preference number: 5 (lower is better) Translates to: IKKTCYCYHCAKDFEAQIQQHLE*MMYFFS Trigger: AGAGAAGAAATACATCATCAACTCCAAATGCTGTTG...TATTTGTGCTTCAAAGTCCTTTGCACAATGGTAGCAATAGCACGTTTTCTTAAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027564.8 |
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| CDS CAA 90 bp | CAGGTCATAATCGTTAGAAAATTTGCTTATTTCAGTCAACAGCATTaGGAGTTGATGATGTATTTCTTCTCTCTTCTCGATCTCTTCTTC | + |
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Preference number: 6 (lower is better) Translates to: QVIIVRKFAYFSQQH*ELMMYFFSLLDLFF Trigger: GAAGAAGAGATCGAGAAGAGAGAAGAAATACATCATCAACTCCAAATGCTGTTGACTGAAATAAGCAAATTTTCTAACGATTATGACCTG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027564.8 |
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