Pregenerated sensors for SERPINB12 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000059956Ensembl transcript IDs: ENSMUST00000081277.9, ENSMUST00000112724.3
Found 113 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CAGAGGTTATCAGAACCAAACTCAAGGGAGGCTTGTGGGATTCCGTaGACAACTGTAGCAGCAGGTGGTCAGCTTCAGGCACTCAGCCAA | + |
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Preference number: 1 (lower is better) Translates to: QRLSEPNSREACGIP*TTVAAGGQLQALSQ Trigger: TTGGCTGAGTGCCTGAAGCTGACCACCTGCTGCTACAGTTGTTCACGGAATCCCACAAGCCTCCCTTGAGTTTGGTTCTGATAACCTCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081277.9 ENSMUST00000112724.3 |
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| 3UTR CCA 90 bp | CTTCTGGTGACAGAGGTTATCAGAACCAAACTCAAGGGAGGCTTGTaGGATTCCGTGAACAACTGTAGCAGCAGGTGGTCAGCTTCAGGC | + |
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Preference number: 1 (lower is better) Translates to: LLVTEVIRTKLKGGL*DSVNNCSSRWSASG Trigger: GCCTGAAGCTGACCACCTGCTGCTACAGTTGTTCACGGAATCCCACAAGCCTCCCTTGAGTTTGGTTCTGATAACCTCTGTCACCAGAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081277.9 ENSMUST00000112724.3 |
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| 3UTR CAA 90 bp | TGGCTTCTGGTGACAGAGGTTATCAGAACCAAACTCAAGGGAGGCTaGTGGGATTCCGTGAACAACTGTAGCAGCAGGTGGTCAGCTTCA | + |
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Preference number: 2 (lower is better) Translates to: WLLVTEVIRTKLKGG*WDSVNNCSSRWSAS Trigger: TGAAGCTGACCACCTGCTGCTACAGTTGTTCACGGAATCCCACAAGCCTCCCTTGAGTTTGGTTCTGATAACCTCTGTCACCAGAAGCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081277.9 ENSMUST00000112724.3 |
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| 3UTR-3UTR GCA 90 bp | GTTATCAGAACCAAACTCAAGGGAGGCTTGTGGGATTCCGTGAACAACTGTAGCAGGAGAAAACCATATTaGCATTCTTCTAAACCCCTC | + |
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Preference number: 2 (lower is better) Translates to: VIRTKLKGGLWDSVNNCSRRKPY*HSSKPL Trigger: GAGGGGTTTAGAAGAATGGCAATATGGTTTTCTCCT...GCTACAGTTGTTCACGGAATCCCACAAGCCTCCCTTGAGTTTGGTTCTGATAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000081277.9 ENSMUST00000112724.3 |
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| 3UTR-3UTR GCA 90 bp | AGCAAGGCTGCTTCATTGATAGGTAGTGAGATCTGGCTTCTGGTGACAGAGGTTAGGAGAAAACCATATTaGCATTCTTCTAAACCCCTC | + |
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Preference number: 2 (lower is better) Translates to: SKAASLIGSEIWLLVTEVRRKPY*HSSKPL Trigger: GAGGGGTTTAGAAGAATGGCAATATGGTTTTCTCCT...AACCTCTGTCACCAGAAGCCAGATCTCACTACCTATCAATGAAGCAGCCTTGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000081277.9 ENSMUST00000112724.3 |
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| 3UTR TCA 72 bp | TCAGAACCAAACTCAAGGGAGGCTTGTGGGATTCCGTaGACAACTGTAGCAGCAGGTGGTCAGCTTCAGGCA | + |
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Preference number: 3 (lower is better) Translates to: SEPNSREACGIP*TTVAAGGQLQA Trigger: TGCCTGAAGCTGACCACCTGCTGCTACAGTTGTTCACGGAATCCCACAAGCCTCCCTTGAGTTTGGTTCTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081277.9 ENSMUST00000112724.3 |
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| 3UTR CCA 72 bp | ACAGAGGTTATCAGAACCAAACTCAAGGGAGGCTTGTaGGATTCCGTGAACAACTGTAGCAGCAGGTGGTCA | + |
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Preference number: 3 (lower is better) Translates to: TEVIRTKLKGGL*DSVNNCSSRWS Trigger: TGACCACCTGCTGCTACAGTTGTTCACGGAATCCCACAAGCCTCCCTTGAGTTTGGTTCTGATAACCTCTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081277.9 ENSMUST00000112724.3 |
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| 3UTR GCA 72 bp | CAGGTGGTCAGCTTCAGGCACTCAGCCAAACACAAATaGCCATGTTTTGTAAGGAGAAAACCATATTGCCAT | + |
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Preference number: 3 (lower is better) Translates to: QVVSFRHSAKHK*PCFVRRKPYCH Trigger: ATGGCAATATGGTTTTCTCCTTACAAAACATGGGCATTTGTGTTTGGCTGAGTGCCTGAAGCTGACCACCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000081277.9 ENSMUST00000112724.3 |
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| CDS-3UTR GCA 90 bp | ACAACTGTAGCAGCAGGTGGTCAGCTTCAGGCACTCAGCCAAACACAAATGCCCCACAACCCCACTGGCTaGAGCTGCCTGGGTACCCAT | + |
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Preference number: 4 (lower is better) Translates to: TTVAAGGQLQALSQTQMPHNPTG*SCLGTH Trigger: ATGGGTACCCAGGCAGCTGCAGCCAGTGGGGTTGTG...GGGCATTTGTGTTTGGCTGAGTGCCTGAAGCTGACCACCTGCTGCTACAGTTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000081277.9 ENSMUST00000112724.3 |
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| CDS-3UTR GCA 90 bp | ACAACTGTAGCAGCAGGTGGTCAGCTTCAGGCACTCAGCCAAACACAAATGCCCTGGAAGGGCCTTCTCTaGAGCCACAACCCCACTGGC | + |
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Preference number: 4 (lower is better) Translates to: TTVAAGGQLQALSQTQMPWKGLL*SHNPTG Trigger: GCCAGTGGGGTTGTGGCTGCAGAGAAGGCCCTTCCA...GGGCATTTGTGTTTGGCTGAGTGCCTGAAGCTGACCACCTGCTGCTACAGTTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081277.9 ENSMUST00000112724.3 |
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| CDS-3UTR TCA 90 bp | ACAACTGTAGCAGCAGGTGGTCAGCTTCAGGCACTCAGCCAAACACAAATGCCCCATGCCAAAGGCAGCTaGGAGACTCAGAGGGCAGAC | + |
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Preference number: 4 (lower is better) Translates to: TTVAAGGQLQALSQTQMPHAKGS*ETQRAD Trigger: GTCTGCCCTCTGAGTCTCTCAGCTGCCTTTGGCATG...GGGCATTTGTGTTTGGCTGAGTGCCTGAAGCTGACCACCTGCTGCTACAGTTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081277.9 ENSMUST00000112724.3 |
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| CDS-3UTR GCA 90 bp | AGAACCAAACTCAAGGGAGGCTTGTGGGATTCCGTGAACAACTGTAGCAGCAGGCTCCCAGGCGGACCATaGCAAAGGCAGCTGAGAGAC | + |
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Preference number: 4 (lower is better) Translates to: RTKLKGGLWDSVNNCSSRLPGGP*QRQLRD Trigger: GTCTCTCAGCTGCCTTTGGCATGGTCCGCCTGGGAG...CCTGCTGCTACAGTTGTTCACGGAATCCCACAAGCCTCCCTTGAGTTTGGTTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081277.9 ENSMUST00000112724.3 |
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| CDS-3UTR GCA 90 bp | AGAACCAAACTCAAGGGAGGCTTGTGGGATTCCGTGAACAACTGTAGCAGCAGGCCCACTGGCTGCAGCTaGCTGGGTACCCATCTCATC | + |
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Preference number: 4 (lower is better) Translates to: RTKLKGGLWDSVNNCSSRPTGCS*LGTHLI Trigger: GATGAGATGGGTACCCAGGCAGCTGCAGCCAGTGGG...CCTGCTGCTACAGTTGTTCACGGAATCCCACAAGCCTCCCTTGAGTTTGGTTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081277.9 ENSMUST00000112724.3 |
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| CDS-3UTR CCA 90 bp | GCTTCTGGTGACAGAGGTTATCAGAACCAAACTCAAGGGAGGCTTGTGGGATTCCTGGCTGCAGCTGCCTaGGTACCCATCTCATCCACC | + |
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Preference number: 4 (lower is better) Translates to: ASGDRGYQNQTQGRLVGFLAAAA*VPISST Trigger: GGTGGATGAGATGGGTACCCAGGCAGCTGCAGCCAG...GAATCCCACAAGCCTCCCTTGAGTTTGGTTCTGATAACCTCTGTCACCAGAAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081277.9 ENSMUST00000112724.3 |
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| CDS-3UTR GCA 90 bp | GGAGAAAGCAAGGCTGCTTCATTGATAGGTAGTGAGATCTGGCTTCTGGTGACACACAACCCCACTGGCTaGAGCTGCCTGGGTACCCAT | + |
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Preference number: 4 (lower is better) Translates to: GESKAASLIGSEIWLLVTHNPTG*SCLGTH Trigger: ATGGGTACCCAGGCAGCTGCAGCCAGTGGGGTTGTG...TGTCACCAGAAGCCAGATCTCACTACCTATCAATGAAGCAGCCTTGCTTTCTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081277.9 ENSMUST00000112724.3 |
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| CDS-3UTR CCA 90 bp | GTTATCAGAACCAAACTCAAGGGAGGCTTGTGGGATTCCGTGAACAACTGTAGCCTGGCTGCAGCTGCCTaGGTACCCATCTCATCCACC | + |
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Preference number: 4 (lower is better) Translates to: VIRTKLKGGLWDSVNNCSLAAAA*VPISST Trigger: GGTGGATGAGATGGGTACCCAGGCAGCTGCAGCCAG...GCTACAGTTGTTCACGGAATCCCACAAGCCTCCCTTGAGTTTGGTTCTGATAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081277.9 ENSMUST00000112724.3 |
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| CDS-3UTR TCA 90 bp | GTTATCAGAACCAAACTCAAGGGAGGCTTGTGGGATTCCGTGAACAACTGTAGCCATGCCAAAGGCAGCTaGGAGACTCAGAGGGCAGAC | + |
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Preference number: 4 (lower is better) Translates to: VIRTKLKGGLWDSVNNCSHAKGS*ETQRAD Trigger: GTCTGCCCTCTGAGTCTCTCAGCTGCCTTTGGCATG...GCTACAGTTGTTCACGGAATCCCACAAGCCTCCCTTGAGTTTGGTTCTGATAAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081277.9 ENSMUST00000112724.3 |
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| CDS-3UTR GCA 90 bp | AGAACCAAACTCAAGGGAGGCTTGTGGGATTCCGTGAACAACTGTAGCAGCAGGTCCAGGATCTGTGCCTaGAGCTCGTCGATAAAGCCA | + |
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Preference number: 4 (lower is better) Translates to: RTKLKGGLWDSVNNCSSRSRICA*SSSIKP Trigger: TGGCTTTATCGACGAGCTGCAGGCACAGATCCTGGA...CCTGCTGCTACAGTTGTTCACGGAATCCCACAAGCCTCCCTTGAGTTTGGTTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081277.9 ENSMUST00000112724.3 |
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| CDS-3UTR CCA 90 bp | AGCTTCAGGCACTCAGCCAAACACAAATGCCCATGTTTTGTAAGGAGAAAACCACAGCCACAACCCCACTaGCTGCAGCTGCCTGGGTAC | + |
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Preference number: 4 (lower is better) Translates to: SFRHSAKHKCPCFVRRKPQPQPH*LQLPGY Trigger: GTACCCAGGCAGCTGCAGCCAGTGGGGTTGTGGCTG...TGGTTTTCTCCTTACAAAACATGGGCATTTGTGTTTGGCTGAGTGCCTGAAGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000081277.9 ENSMUST00000112724.3 |
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| CDS-3UTR GCA 90 bp | GCTTCTGGTGACAGAGGTTATCAGAACCAAACTCAAGGGAGGCTTGTGGGATTCCTCATCAATCTGATGTaGACTGTCCCCTCGAGCTCC | + |
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Preference number: 4 (lower is better) Translates to: ASGDRGYQNQTQGRLVGFLINLM*TVPSSS Trigger: GGAGCTCGAGGGGACAGTGCACATCAGATTGATGAG...GAATCCCACAAGCCTCCCTTGAGTTTGGTTCTGATAACCTCTGTCACCAGAAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081277.9 ENSMUST00000112724.3 |
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| CDS-3UTR GCA 90 bp | ATCAGAACCAAACTCAAGGGAGGCTTGTGGGATTCCGTGAACAACTGTAGCAGCCTCATCAATCTGATGTaGACTGTCCCCTCGAGCTCC | + |
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Preference number: 4 (lower is better) Translates to: IRTKLKGGLWDSVNNCSSLINLM*TVPSSS Trigger: GGAGCTCGAGGGGACAGTGCACATCAGATTGATGAG...GCTGCTACAGTTGTTCACGGAATCCCACAAGCCTCCCTTGAGTTTGGTTCTGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081277.9 ENSMUST00000112724.3 |
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| CDS-3UTR GCA 90 bp | AGCTTCAGGCACTCAGCCAAACACAAATGCCCATGTTTTGTAAGGAGAAAACCATGGAAGGGCCTTCTCTaGAGCCACAACCCCACTGGC | + |
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Preference number: 4 (lower is better) Translates to: SFRHSAKHKCPCFVRRKPWKGLL*SHNPTG Trigger: GCCAGTGGGGTTGTGGCTGCAGAGAAGGCCCTTCCA...TGGTTTTCTCCTTACAAAACATGGGCATTTGTGTTTGGCTGAGTGCCTGAAGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000081277.9 ENSMUST00000112724.3 |
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| CDS-3UTR CCA 90 bp | AGGCACTCAGCCAAACACAAATGCCCATGTTTTGTAAGGAGAAAACCATATTGCCAGCCACAACCCCACTaGCTGCAGCTGCCTGGGTAC | + |
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Preference number: 4 (lower is better) Translates to: RHSAKHKCPCFVRRKPYCQPQPH*LQLPGY Trigger: GTACCCAGGCAGCTGCAGCCAGTGGGGTTGTGGCTG...GCAATATGGTTTTCTCCTTACAAAACATGGGCATTTGTGTTTGGCTGAGTGCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000081277.9 ENSMUST00000112724.3 |
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| 3UTR CAA 72 bp | GTGACAGAGGTTATCAGAACCAAACTCAAGGGAGGCTaGTGGGATTCCGTGAACAACTGTAGCAGCAGGTGG | + |
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Preference number: 4 (lower is better) Translates to: VTEVIRTKLKGG*WDSVNNCSSRW Trigger: CCACCTGCTGCTACAGTTGTTCACGGAATCCCACAAGCCTCCCTTGAGTTTGGTTCTGATAACCTCTGTCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081277.9 ENSMUST00000112724.3 |
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| CDS-3UTR TCA 90 bp | AGAACCAAACTCAAGGGAGGCTTGTGGGATTCCGTGAACAACTGTAGCAGCAGGCAGCACCAGCACAGTTaGGTTATCAATAGCCTCCTT | + |
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Preference number: 4 (lower is better) Translates to: RTKLKGGLWDSVNNCSSRQHQHS*VINSLL Trigger: AAGGAGGCTATTGATAACTCAACTGTGCTGGTGCTG...CCTGCTGCTACAGTTGTTCACGGAATCCCACAAGCCTCCCTTGAGTTTGGTTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081277.9 ENSMUST00000112724.3 |
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| CDS-3UTR GCA 90 bp | AGGCACTCAGCCAAACACAAATGCCCATGTTTTGTAAGGAGAAAACCATATTGCCTCCCAGGCGGACCATaGCAAAGGCAGCTGAGAGAC | + |
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Preference number: 4 (lower is better) Translates to: RHSAKHKCPCFVRRKPYCLPGGP*QRQLRD Trigger: GTCTCTCAGCTGCCTTTGGCATGGTCCGCCTGGGAG...GCAATATGGTTTTCTCCTTACAAAACATGGGCATTTGTGTTTGGCTGAGTGCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000081277.9 ENSMUST00000112724.3 |
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| CDS-3UTR GCA 90 bp | AGAACCAAACTCAAGGGAGGCTTGTGGGATTCCGTGAACAACTGTAGCAGCAGGGCTGATGTTTGTTTCTaGCCTTCCAGAGAGCTGTCA | + |
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Preference number: 4 (lower is better) Translates to: RTKLKGGLWDSVNNCSSRADVCF*PSRELS Trigger: TGACAGCTCTCTGGAAGGGCAGAAACAAACATCAGC...CCTGCTGCTACAGTTGTTCACGGAATCCCACAAGCCTCCCTTGAGTTTGGTTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081277.9 ENSMUST00000112724.3 |
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| CDS-3UTR GCA 90 bp | GCACTCAGCCAAACACAAATGCCCATGTTTTGTAAGGAGAAAACCATATTGCCACCCACTGGCTGCAGCTaGCTGGGTACCCATCTCATC | + |
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Preference number: 4 (lower is better) Translates to: ALSQTQMPMFCKEKTILPPTGCS*LGTHLI Trigger: GATGAGATGGGTACCCAGGCAGCTGCAGCCAGTGGG...TGGCAATATGGTTTTCTCCTTACAAAACATGGGCATTTGTGTTTGGCTGAGTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000081277.9 ENSMUST00000112724.3 |
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| CDS-3UTR TCA 90 bp | AGCAAGGCTGCTTCATTGATAGGTAGTGAGATCTGGCTTCTGGTGACAGAGGTTAATGCCTCATCAATCTaGTGTGCACTGTCCCCTCGA | + |
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Preference number: 4 (lower is better) Translates to: SKAASLIGSEIWLLVTEVNASSI*CALSPR Trigger: TCGAGGGGACAGTGCACATCAGATTGATGAGGCATT...AACCTCTGTCACCAGAAGCCAGATCTCACTACCTATCAATGAAGCAGCCTTGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081277.9 ENSMUST00000112724.3 |
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| CDS-3UTR TCA 90 bp | ACAACTGTAGCAGCAGGTGGTCAGCTTCAGGCACTCAGCCAAACACAAATGCCCTGGCAGCCAAGCAATTaGTGGTCATTTGTAGATTCA | + |
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Preference number: 4 (lower is better) Translates to: TTVAAGGQLQALSQTQMPWQPSN*WSFVDS Trigger: TGAATCTACAAATGACCATCAATTGCTTGGCTGCCA...GGGCATTTGTGTTTGGCTGAGTGCCTGAAGCTGACCACCTGCTGCTACAGTTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081277.9 ENSMUST00000112724.3 |
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| CDS-3UTR TCA 90 bp | ACAACTGTAGCAGCAGGTGGTCAGCTTCAGGCACTCAGCCAAACACAAATGCCCTGCCAAACAGTTCCTTaGTTTTACCTTGGCTTTGAC | + |
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Preference number: 4 (lower is better) Translates to: TTVAAGGQLQALSQTQMPCQTVP*FYLGFD Trigger: GTCAAAGCCAAGGTAAAATCAAGGAACTGTTTGGCA...GGGCATTTGTGTTTGGCTGAGTGCCTGAAGCTGACCACCTGCTGCTACAGTTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081277.9 ENSMUST00000112724.3 |
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| CDS-3UTR TCA 90 bp | GCTTCTGGTGACAGAGGTTATCAGAACCAAACTCAAGGGAGGCTTGTGGGATTCCGGTGTTTTCAGAGTTaGATTCTCTCTCCCACTTGG | + |
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Preference number: 4 (lower is better) Translates to: ASGDRGYQNQTQGRLVGFRCFQS*ILSPTW Trigger: CCAAGTGGGAGAGAGAATTCAACTCTGAAAACACCG...GAATCCCACAAGCCTCCCTTGAGTTTGGTTCTGATAACCTCTGTCACCAGAAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081277.9 ENSMUST00000112724.3 |
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| CDS-3UTR GCA 90 bp | AGAACCAAACTCAAGGGAGGCTTGTGGGATTCCGTGAACAACTGTAGCAGCAGGAGCTGTCAGAAGCTTTaGTTTCACTTTGTGGAGAGG | + |
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Preference number: 4 (lower is better) Translates to: RTKLKGGLWDSVNNCSSRSCQKL*FHFVER Trigger: CCTCTCCACAAAGTGAAAGCAAAGCTTCTGACAGCT...CCTGCTGCTACAGTTGTTCACGGAATCCCACAAGCCTCCCTTGAGTTTGGTTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081277.9 ENSMUST00000112724.3 |
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| CDS-3UTR TCA 90 bp | AGAACCAAACTCAAGGGAGGCTTGTGGGATTCCGTGAACAACTGTAGCAGCAGGTGGCAGCCAAGCAATTaGTGGTCATTTGTAGATTCA | + |
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Preference number: 4 (lower is better) Translates to: RTKLKGGLWDSVNNCSSRWQPSN*WSFVDS Trigger: TGAATCTACAAATGACCATCAATTGCTTGGCTGCCA...CCTGCTGCTACAGTTGTTCACGGAATCCCACAAGCCTCCCTTGAGTTTGGTTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081277.9 ENSMUST00000112724.3 |
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| CDS-3UTR TCA 90 bp | AGAACCAAACTCAAGGGAGGCTTGTGGGATTCCGTGAACAACTGTAGCAGCAGGTGCCAAACAGTTCCTTaGTTTTACCTTGGCTTTGAC | + |
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Preference number: 4 (lower is better) Translates to: RTKLKGGLWDSVNNCSSRCQTVP*FYLGFD Trigger: GTCAAAGCCAAGGTAAAATCAAGGAACTGTTTGGCA...CCTGCTGCTACAGTTGTTCACGGAATCCCACAAGCCTCCCTTGAGTTTGGTTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081277.9 ENSMUST00000112724.3 |
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| CDS-3UTR TCA 90 bp | GGAGAAAGCAAGGCTGCTTCATTGATAGGTAGTGAGATCTGGCTTCTGGTGACACAGCACCAGCACAGTTaGGTTATCAATAGCCTCCTT | + |
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Preference number: 4 (lower is better) Translates to: GESKAASLIGSEIWLLVTQHQHS*VINSLL Trigger: AAGGAGGCTATTGATAACTCAACTGTGCTGGTGCTG...TGTCACCAGAAGCCAGATCTCACTACCTATCAATGAAGCAGCCTTGCTTTCTCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081277.9 ENSMUST00000112724.3 |
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| CDS-3UTR GCA 90 bp | GTTATCAGAACCAAACTCAAGGGAGGCTTGTGGGATTCCGTGAACAACTGTAGCGCTGATGTTTGTTTCTaGCCTTCCAGAGAGCTGTCA | + |
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Preference number: 4 (lower is better) Translates to: VIRTKLKGGLWDSVNNCSADVCF*PSRELS Trigger: TGACAGCTCTCTGGAAGGGCAGAAACAAACATCAGC...GCTACAGTTGTTCACGGAATCCCACAAGCCTCCCTTGAGTTTGGTTCTGATAAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081277.9 ENSMUST00000112724.3 |
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| CDS-3UTR GCA 90 bp | AGCTTCAGGCACTCAGCCAAACACAAATGCCCATGTTTTGTAAGGAGAAAACCATCCAGGATCTGTGCCTaGAGCTCGTCGATAAAGCCA | + |
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Preference number: 4 (lower is better) Translates to: SFRHSAKHKCPCFVRRKPSRICA*SSSIKP Trigger: TGGCTTTATCGACGAGCTGCAGGCACAGATCCTGGA...TGGTTTTCTCCTTACAAAACATGGGCATTTGTGTTTGGCTGAGTGCCTGAAGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000081277.9 ENSMUST00000112724.3 |
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| CDS-3UTR CCA 90 bp | ATCAGAACCAAACTCAAGGGAGGCTTGTGGGATTCCGTGAACAACTGTAGCAGCGTGGAGAGGGATCATTaGGTTCTTTGTGTTCATCCT | + |
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Preference number: 4 (lower is better) Translates to: IRTKLKGGLWDSVNNCSSVERDH*VLCVHP Trigger: AGGATGAACACAAAGAACCCAATGATCCCTCTCCAC...GCTGCTACAGTTGTTCACGGAATCCCACAAGCCTCCCTTGAGTTTGGTTCTGAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081277.9 ENSMUST00000112724.3 |
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| CDS-3UTR CCA 90 bp | AGCTTCAGGCACTCAGCCAAACACAAATGCCCATGTTTTGTAAGGAGAAAACCAAAACTCCACCCAAGATaGAAGGGCCTTCTCTGCAGC | + |
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Preference number: 4 (lower is better) Translates to: SFRHSAKHKCPCFVRRKPKLHPR*KGLLCS Trigger: GCTGCAGAGAAGGCCCTTCCATCTTGGGTGGAGTTT...TGGTTTTCTCCTTACAAAACATGGGCATTTGTGTTTGGCTGAGTGCCTGAAGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000081277.9 ENSMUST00000112724.3 |
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| CDS-3UTR TCA 90 bp | GGAGAAAGCAAGGCTGCTTCATTGATAGGTAGTGAGATCTGGCTTCTGGTGACAATTCACATTGTCTTCTaGGCAAGATGGAAGCAGGAC | + |
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Preference number: 4 (lower is better) Translates to: GESKAASLIGSEIWLLVTIHIVF*ARWKQD Trigger: GTCCTGCTTCCATCTTGCTCAGAAGACAATGTGAAT...TGTCACCAGAAGCCAGATCTCACTACCTATCAATGAAGCAGCCTTGCTTTCTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081277.9 ENSMUST00000112724.3 |
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| CDS-3UTR CCA 90 bp | AGAACCAAACTCAAGGGAGGCTTGTGGGATTCCGTGAACAACTGTAGCAGCAGGTGTCTCTGTCTATTCTaGAGAGAAGTTTCCCAAAGT | + |
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Preference number: 4 (lower is better) Translates to: RTKLKGGLWDSVNNCSSRCLCLF*REVSQS Trigger: ACTTTGGGAAACTTCTCTCCAGAATAGACAGAGACA...CCTGCTGCTACAGTTGTTCACGGAATCCCACAAGCCTCCCTTGAGTTTGGTTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081277.9 ENSMUST00000112724.3 |
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| CDS-3UTR CCA 90 bp | ACAACTGTAGCAGCAGGTGGTCAGCTTCAGGCACTCAGCCAAACACAAATGCCCTCCACAAAGGTCTTGTaGACAATTTTGGACAAATAC | + |
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Preference number: 4 (lower is better) Translates to: TTVAAGGQLQALSQTQMPSTKVL*TILDKY Trigger: GTATTTGTCCAAAATTGTCCACAAGACCTTTGTGGA...GGGCATTTGTGTTTGGCTGAGTGCCTGAAGCTGACCACCTGCTGCTACAGTTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081277.9 ENSMUST00000112724.3 |
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| CDS-3UTR CCA 90 bp | GCACTCAGCCAAACACAAATGCCCATGTTTTGTAAGGAGAAAACCATATTGCCAAAACTCCACCCAAGATaGAAGGGCCTTCTCTGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: ALSQTQMPMFCKEKTILPKLHPR*KGLLCS Trigger: GCTGCAGAGAAGGCCCTTCCATCTTGGGTGGAGTTT...TGGCAATATGGTTTTCTCCTTACAAAACATGGGCATTTGTGTTTGGCTGAGTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000081277.9 ENSMUST00000112724.3 |
||
| CDS-3UTR TCA 90 bp | GCACTCAGCCAAACACAAATGCCCATGTTTTGTAAGGAGAAAACCATATTGCCAAATGCCTCATCAATCTaGTGTGCACTGTCCCCTCGA | + |
|
Preference number: 4 (lower is better) Translates to: ALSQTQMPMFCKEKTILPNASSI*CALSPR Trigger: TCGAGGGGACAGTGCACATCAGATTGATGAGGCATT...TGGCAATATGGTTTTCTCCTTACAAAACATGGGCATTTGTGTTTGGCTGAGTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000081277.9 ENSMUST00000112724.3 |
||
| CDS-3UTR TCA 90 bp | AGCTTCAGGCACTCAGCCAAACACAAATGCCCATGTTTTGTAAGGAGAAAACCACTGATCCTGAGAAGCTaGTGTTTGTTTCTGCCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: SFRHSAKHKCPCFVRRKPLILRS*CLFLPF Trigger: GAAGGGCAGAAACAAACATCAGCTTCTCAGGATCAG...TGGTTTTCTCCTTACAAAACATGGGCATTTGTGTTTGGCTGAGTGCCTGAAGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000081277.9 ENSMUST00000112724.3 |
||
| CDS-3UTR TCA 90 bp | ATCAGAACCAAACTCAAGGGAGGCTTGTGGGATTCCGTGAACAACTGTAGCAGCTCTTCTCGTTCTCATTaGGACAGAAAGATGCATCAA | + |
|
Preference number: 4 (lower is better) Translates to: IRTKLKGGLWDSVNNCSSSSRSH*DRKMHQ Trigger: TTGATGCATCTTTCTGTCTCAATGAGAACGAGAAGA...GCTGCTACAGTTGTTCACGGAATCCCACAAGCCTCCCTTGAGTTTGGTTCTGAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081277.9 ENSMUST00000112724.3 |
||
| CDS-3UTR TCA 90 bp | GCTTCTGGTGACAGAGGTTATCAGAACCAAACTCAAGGGAGGCTTGTGGGATTCTCTTCTCGTTCTCATTaGGACAGAAAGATGCATCAA | + |
|
Preference number: 4 (lower is better) Translates to: ASGDRGYQNQTQGRLVGFSSRSH*DRKMHQ Trigger: TTGATGCATCTTTCTGTCTCAATGAGAACGAGAAGA...GAATCCCACAAGCCTCCCTTGAGTTTGGTTCTGATAACCTCTGTCACCAGAAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081277.9 ENSMUST00000112724.3 |
||
| CDS-3UTR CCA 90 bp | GCTTCTGGTGACAGAGGTTATCAGAACCAAACTCAAGGGAGGCTTGTGGGATTCTGTCTCTGTCTATTCTaGAGAGAAGTTTCCCAAAGT | + |
|
Preference number: 4 (lower is better) Translates to: ASGDRGYQNQTQGRLVGFCLCLF*REVSQS Trigger: ACTTTGGGAAACTTCTCTCCAGAATAGACAGAGACA...GAATCCCACAAGCCTCCCTTGAGTTTGGTTCTGATAACCTCTGTCACCAGAAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081277.9 ENSMUST00000112724.3 |
||
| CDS-3UTR CCA 90 bp | AGCAAGGCTGCTTCATTGATAGGTAGTGAGATCTGGCTTCTGGTGACAGAGGTTTCTTCCAGGTTGAACTaGGGAAAGGAAATAGCTACA | + |
|
Preference number: 4 (lower is better) Translates to: SKAASLIGSEIWLLVTEVSSRLN*GKEIAT Trigger: TGTAGCTATTTCCTTTCCCCAGTTCAACCTGGAAGA...AACCTCTGTCACCAGAAGCCAGATCTCACTACCTATCAATGAAGCAGCCTTGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081277.9 ENSMUST00000112724.3 |
||
| CDS-3UTR CCA 90 bp | AGAACCAAACTCAAGGGAGGCTTGTGGGATTCCGTGAACAACTGTAGCAGCAGGTCTTGTGGACAATTTTaGACAAATACAGATTGGGAC | + |
|
Preference number: 4 (lower is better) Translates to: RTKLKGGLWDSVNNCSSRSCGQF*TNTDWD Trigger: GTCCCAATCTGTATTTGTCCAAAATTGTCCACAAGA...CCTGCTGCTACAGTTGTTCACGGAATCCCACAAGCCTCCCTTGAGTTTGGTTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081277.9 ENSMUST00000112724.3 |
||
| CDS-3UTR TCA 90 bp | GCACTCAGCCAAACACAAATGCCCATGTTTTGTAAGGAGAAAACCATATTGCCACGGTGTTTTCAGAGTTaGATTCTCTCTCCCACTTGG | + |
|
Preference number: 4 (lower is better) Translates to: ALSQTQMPMFCKEKTILPRCFQS*ILSPTW Trigger: CCAAGTGGGAGAGAGAATTCAACTCTGAAAACACCG...TGGCAATATGGTTTTCTCCTTACAAAACATGGGCATTTGTGTTTGGCTGAGTGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000081277.9 ENSMUST00000112724.3 |
||
| CDS-3UTR GCA 90 bp | GTTATCAGAACCAAACTCAAGGGAGGCTTGTGGGATTCCGTGAACAACTGTAGCAAGGGCAATAGACTCTaGCACAGAAAAGTAAACTCT | + |
|
Preference number: 4 (lower is better) Translates to: VIRTKLKGGLWDSVNNCSKGNRL*HRKVNS Trigger: AGAGTTTACTTTTCTGTGGCAGAGTCTATTGCCCTT...GCTACAGTTGTTCACGGAATCCCACAAGCCTCCCTTGAGTTTGGTTCTGATAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081277.9 ENSMUST00000112724.3 |
||
| CDS-3UTR TCA 90 bp | AGCTTCAGGCACTCAGCCAAACACAAATGCCCATGTTTTGTAAGGAGAAAACCAGTCATCAGAGTATTCTaGGCAGATTGGAAATTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: SFRHSAKHKCPCFVRRKPVIRVF*ADWKFL Trigger: CAGGAATTTCCAATCTGCTCAGAATACTCTGATGAC...TGGTTTTCTCCTTACAAAACATGGGCATTTGTGTTTGGCTGAGTGCCTGAAGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000081277.9 ENSMUST00000112724.3 |
||
| CDS-3UTR GCA 90 bp | GGAGAAAGCAAGGCTGCTTCATTGATAGGTAGTGAGATCTGGCTTCTGGTGACATTCTTTTCAAGCTCTTaGAGGCTATTCACATTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: GESKAASLIGSEIWLLVTFFSSS*RLFTLS Trigger: AGACAATGTGAATAGCCTGCAAGAGCTTGAAAAGAA...TGTCACCAGAAGCCAGATCTCACTACCTATCAATGAAGCAGCCTTGCTTTCTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081277.9 ENSMUST00000112724.3 |
||
| CDS-3UTR CCA 90 bp | GCACTCAGCCAAACACAAATGCCCATGTTTTGTAAGGAGAAAACCATATTGCCAGTGGAGAGGGATCATTaGGTTCTTTGTGTTCATCCT | + |
|
Preference number: 4 (lower is better) Translates to: ALSQTQMPMFCKEKTILPVERDH*VLCVHP Trigger: AGGATGAACACAAAGAACCCAATGATCCCTCTCCAC...TGGCAATATGGTTTTCTCCTTACAAAACATGGGCATTTGTGTTTGGCTGAGTGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000081277.9 ENSMUST00000112724.3 |
||
| CDS-3UTR CCA 90 bp | GGAGAAAGCAAGGCTGCTTCATTGATAGGTAGTGAGATCTGGCTTCTGGTGACATTCTCAGAATCCTTCTaGAAATCTACACTTTCGACT | + |
|
Preference number: 4 (lower is better) Translates to: GESKAASLIGSEIWLLVTFSESF*KSTLST Trigger: AGTCGAAAGTGTAGATTTCCAGAAGGATTCTGAGAA...TGTCACCAGAAGCCAGATCTCACTACCTATCAATGAAGCAGCCTTGCTTTCTCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081277.9 ENSMUST00000112724.3 |
||
| CDS-3UTR CCA 90 bp | GGAGAAAGCAAGGCTGCTTCATTGATAGGTAGTGAGATCTGGCTTCTGGTGACATCTTGTGGACAATTTTaGACAAATACAGATTGGGAC | + |
|
Preference number: 4 (lower is better) Translates to: GESKAASLIGSEIWLLVTSCGQF*TNTDWD Trigger: GTCCCAATCTGTATTTGTCCAAAATTGTCCACAAGA...TGTCACCAGAAGCCAGATCTCACTACCTATCAATGAAGCAGCCTTGCTTTCTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081277.9 ENSMUST00000112724.3 |
||
| CDS-3UTR CCA 90 bp | AGCAAGGCTGCTTCATTGATAGGTAGTGAGATCTGGCTTCTGGTGACAGAGGTTTCCACAAAGGTCTTGTaGACAATTTTGGACAAATAC | + |
|
Preference number: 4 (lower is better) Translates to: SKAASLIGSEIWLLVTEVSTKVL*TILDKY Trigger: GTATTTGTCCAAAATTGTCCACAAGACCTTTGTGGA...AACCTCTGTCACCAGAAGCCAGATCTCACTACCTATCAATGAAGCAGCCTTGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081277.9 ENSMUST00000112724.3 |
||
| CDS-3UTR TCA 90 bp | GCACTCAGCCAAACACAAATGCCCATGTTTTGTAAGGAGAAAACCATATTGCCAGTCATCAGAGTATTCTaGGCAGATTGGAAATTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: ALSQTQMPMFCKEKTILPVIRVF*ADWKFL Trigger: CAGGAATTTCCAATCTGCTCAGAATACTCTGATGAC...TGGCAATATGGTTTTCTCCTTACAAAACATGGGCATTTGTGTTTGGCTGAGTGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000081277.9 ENSMUST00000112724.3 |
||
| CDS-3UTR CCA 90 bp | GCACTCAGCCAAACACAAATGCCCATGTTTTGTAAGGAGAAAACCATATTGCCATCTTCCAGGTTGAACTaGGGAAAGGAAATAGCTACA | + |
|
Preference number: 4 (lower is better) Translates to: ALSQTQMPMFCKEKTILPSSRLN*GKEIAT Trigger: TGTAGCTATTTCCTTTCCCCAGTTCAACCTGGAAGA...TGGCAATATGGTTTTCTCCTTACAAAACATGGGCATTTGTGTTTGGCTGAGTGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000081277.9 ENSMUST00000112724.3 |
||
| CDS-3UTR GCA 90 bp | GCACTCAGCCAAACACAAATGCCCATGTTTTGTAAGGAGAAAACCATATTGCCAAAGGGCAATAGACTCTaGCACAGAAAAGTAAACTCT | + |
|
Preference number: 4 (lower is better) Translates to: ALSQTQMPMFCKEKTILPKGNRL*HRKVNS Trigger: AGAGTTTACTTTTCTGTGGCAGAGTCTATTGCCCTT...TGGCAATATGGTTTTCTCCTTACAAAACATGGGCATTTGTGTTTGGCTGAGTGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000081277.9 ENSMUST00000112724.3 |
||
| CDS-3UTR GCA 90 bp | AGGCACTCAGCCAAACACAAATGCCCATGTTTTGTAAGGAGAAAACCATATTGCTTCTTTTCAAGCTCTTaGAGGCTATTCACATTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: RHSAKHKCPCFVRRKPYCFFSSS*RLFTLS Trigger: AGACAATGTGAATAGCCTGCAAGAGCTTGAAAAGAA...GCAATATGGTTTTCTCCTTACAAAACATGGGCATTTGTGTTTGGCTGAGTGCCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000081277.9 ENSMUST00000112724.3 |
||
| CDS GCA 90 bp | AGATGGAAGGGCCTTCTCTGCAGCCACAACCCCACTGGCTGCAGCTaGCTGGGTACCCATCTCATCCACCTCCACAAAGGTCTTGTGGAC | + |
|
Preference number: 5 (lower is better) Translates to: RWKGLLCSHNPTGCS*LGTHLIHLHKGLVD Trigger: GTCCACAAGACCTTTGTGGAGGTGGATGAGATGGGTACCCAGGCAGCTGCAGCCAGTGGGGTTGTGGCTGCAGAGAAGGCCCTTCCATCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081277.9 ENSMUST00000112724.3 |
||
| CDS TCA 90 bp | TGCACTGTCCCCTCGAGCTCCCAGGCGGACCATGCCAAAGGCAGCTaGGAGACTCAGAGGGCAGACGAAGATATTTTTATGAGCATCATC | + |
|
Preference number: 5 (lower is better) Translates to: CTVPSSSQADHAKGS*ETQRADEDIFMSII Trigger: GATGATGCTCATAAAAATATCTTCGTCTGCCCTCTGAGTCTCTCAGCTGCCTTTGGCATGGTCCGCCTGGGAGCTCGAGGGGACAGTGCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000081277.9 ENSMUST00000112724.3 |
||
| CDS GCA 90 bp | CATCAATCTGATGTGCACTGTCCCCTCGAGCTCCCAGGCGGACCATaGCAAAGGCAGCTGAGAGACTCAGAGGGCAGACGAAGATATTTT | + |
|
Preference number: 5 (lower is better) Translates to: HQSDVHCPLELPGGP*QRQLRDSEGRRRYF Trigger: AAAATATCTTCGTCTGCCCTCTGAGTCTCTCAGCTGCCTTTGGCATGGTCCGCCTGGGAGCTCGAGGGGACAGTGCACATCAGATTGATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081277.9 ENSMUST00000112724.3 |
||
| CDS-3UTR CAA 90 bp | AGAACCAAACTCAAGGGAGGCTTGTGGGATTCCGTGAACAACTGTAGCAGCAGGAGCTTTGCTTTCACTTaGTGGAGAGGGATCATTGGG | + |
|
Preference number: 5 (lower is better) Translates to: RTKLKGGLWDSVNNCSSRSFAFT*WRGIIG Trigger: CCCAATGATCCCTCTCCACAAAGTGAAAGCAAAGCT...CCTGCTGCTACAGTTGTTCACGGAATCCCACAAGCCTCCCTTGAGTTTGGTTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081277.9 ENSMUST00000112724.3 |
||
| CDS-3UTR CAA 90 bp | ACAACTGTAGCAGCAGGTGGTCAGCTTCAGGCACTCAGCCAAACACAAATGCCCACGGTGTTTTCAGAGTaGAATTCTCTCTCCCACTTG | + |
|
Preference number: 5 (lower is better) Translates to: TTVAAGGQLQALSQTQMPTVFSE*NSLSHL Trigger: CAAGTGGGAGAGAGAATTCAACTCTGAAAACACCGT...GGGCATTTGTGTTTGGCTGAGTGCCTGAAGCTGACCACCTGCTGCTACAGTTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081277.9 ENSMUST00000112724.3 |
||
| CDS-3UTR CAA 90 bp | ACAACTGTAGCAGCAGGTGGTCAGCTTCAGGCACTCAGCCAAACACAAATGCCCTGCAGGCTATTCACATaGTCTTCTGAGCAAGATGGA | + |
|
Preference number: 5 (lower is better) Translates to: TTVAAGGQLQALSQTQMPCRLFT*SSEQDG Trigger: TCCATCTTGCTCAGAAGACAATGTGAATAGCCTGCA...GGGCATTTGTGTTTGGCTGAGTGCCTGAAGCTGACCACCTGCTGCTACAGTTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081277.9 ENSMUST00000112724.3 |
||
| CDS TCA 90 bp | TGTTCATCCTTAGAAAGTTCATTGAAATGTAATGCCTCATCAATCTaGTGTGCACTGTCCCCTCGAGCTCCCAGGCGGACCATGCCAAAG | + |
|
Preference number: 5 (lower is better) Translates to: CSSLESSLKCNASSI*CALSPRAPRRTMPK Trigger: CTTTGGCATGGTCCGCCTGGGAGCTCGAGGGGACAGTGCACATCAGATTGATGAGGCATTACATTTCAATGAACTTTCTAAGGATGAACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081277.9 ENSMUST00000112724.3 |
||
| CDS-3UTR CAA 90 bp | ACAACTGTAGCAGCAGGTGGTCAGCTTCAGGCACTCAGCCAAACACAAATGCCCTTCCTTGATTTTACCTaGGCTTTGACTTTCAACCCA | + |
|
Preference number: 5 (lower is better) Translates to: TTVAAGGQLQALSQTQMPFLDFT*ALTFNP Trigger: TGGGTTGAAAGTCAAAGCCAAGGTAAAATCAAGGAA...GGGCATTTGTGTTTGGCTGAGTGCCTGAAGCTGACCACCTGCTGCTACAGTTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081277.9 ENSMUST00000112724.3 |
||
| CDS-3UTR CAA 90 bp | GCTTCTGGTGACAGAGGTTATCAGAACCAAACTCAAGGGAGGCTTGTGGGATTCACGGTGTTTTCAGAGTaGAATTCTCTCTCCCACTTG | + |
|
Preference number: 5 (lower is better) Translates to: ASGDRGYQNQTQGRLVGFTVFSE*NSLSHL Trigger: CAAGTGGGAGAGAGAATTCAACTCTGAAAACACCGT...GAATCCCACAAGCCTCCCTTGAGTTTGGTTCTGATAACCTCTGTCACCAGAAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081277.9 ENSMUST00000112724.3 |
||
| CDS-3UTR CAA 90 bp | ATCAGAACCAAACTCAAGGGAGGCTTGTGGGATTCCGTGAACAACTGTAGCAGCTCATCAAAGACATCCTaGATGCCCATGTCCTGTAGA | + |
|
Preference number: 5 (lower is better) Translates to: IRTKLKGGLWDSVNNCSSSSKTS*MPMSCR Trigger: TCTACAGGACATGGGCATCAAGGATGTCTTTGATGA...GCTGCTACAGTTGTTCACGGAATCCCACAAGCCTCCCTTGAGTTTGGTTCTGAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081277.9 ENSMUST00000112724.3 |
||
| CDS-3UTR CAA 90 bp | AGCAAGGCTGCTTCATTGATAGGTAGTGAGATCTGGCTTCTGGTGACAGAGGTTAAGAGGAAAGGGTGGTaGGCATTAAACTCCACCCAA | + |
|
Preference number: 5 (lower is better) Translates to: SKAASLIGSEIWLLVTEVKRKGW*ALNSTQ Trigger: TTGGGTGGAGTTTAATGCCAACCACCCTTTCCTCTT...AACCTCTGTCACCAGAAGCCAGATCTCACTACCTATCAATGAAGCAGCCTTGCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081277.9 ENSMUST00000112724.3 |
||
| CDS-3UTR CAA 90 bp | AGAACCAAACTCAAGGGAGGCTTGTGGGATTCCGTGAACAACTGTAGCAGCAGGGGATCATTGGGTTCTTaGTGTTCATCCTTAGAAAGT | + |
|
Preference number: 5 (lower is better) Translates to: RTKLKGGLWDSVNNCSSRGSLGS*CSSLES Trigger: ACTTTCTAAGGATGAACACAAAGAACCCAATGATCC...CCTGCTGCTACAGTTGTTCACGGAATCCCACAAGCCTCCCTTGAGTTTGGTTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081277.9 ENSMUST00000112724.3 |
||
| CDS TCA 90 bp | CAATTGATGGTCATTTGTAGATTCACCCTGCTGATCCTGAGAAGCTaGTGTTTGTTTCTGCCCTTCCAGAGAGCTGTCAGAAGCTTTGCT | + |
|
Preference number: 5 (lower is better) Translates to: QLMVICRFTLLILRS*CLFLPFQRAVRSFA Trigger: AGCAAAGCTTCTGACAGCTCTCTGGAAGGGCAGAAACAAACATCAGCTTCTCAGGATCAGCAGGGTGAATCTACAAATGACCATCAATTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081277.9 ENSMUST00000112724.3 |
||
| CDS-3UTR CAA 90 bp | GTTATCAGAACCAAACTCAAGGGAGGCTTGTGGGATTCCGTGAACAACTGTAGCAGTATTCTGAGCAGATaGGAAATTCCTGCTCTCCAT | + |
|
Preference number: 5 (lower is better) Translates to: VIRTKLKGGLWDSVNNCSSILSR*EIPALH Trigger: ATGGAGAGCAGGAATTTCCAATCTGCTCAGAATACT...GCTACAGTTGTTCACGGAATCCCACAAGCCTCCCTTGAGTTTGGTTCTGATAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081277.9 ENSMUST00000112724.3 |
||
| CDS-3UTR CAA 90 bp | GCTTCTGGTGACAGAGGTTATCAGAACCAAACTCAAGGGAGGCTTGTGGGATTCCTACACTTTCGACTGTaGTGTGGAAAAATTCCGTTA | + |
|
Preference number: 5 (lower is better) Translates to: ASGDRGYQNQTQGRLVGFLHFRL*CGKIPL Trigger: TAACGGAATTTTTCCACACAACAGTCGAAAGTGTAG...GAATCCCACAAGCCTCCCTTGAGTTTGGTTCTGATAACCTCTGTCACCAGAAGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000081277.9 ENSMUST00000112724.3 |
||
| CDS-3UTR CAA 90 bp | ATCAGAACCAAACTCAAGGGAGGCTTGTGGGATTCCGTGAACAACTGTAGCAGCTTATCAATAGCCTCCTaGCCAAACAGTTCCTTGATT | + |
|
Preference number: 5 (lower is better) Translates to: IRTKLKGGLWDSVNNCSSLSIAS*PNSSLI Trigger: AATCAAGGAACTGTTTGGCAAGGAGGCTATTGATAA...GCTGCTACAGTTGTTCACGGAATCCCACAAGCCTCCCTTGAGTTTGGTTCTGAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081277.9 ENSMUST00000112724.3 |
||
| CDS-3UTR CAA 90 bp | GCTTCTGGTGACAGAGGTTATCAGAACCAAACTCAAGGGAGGCTTGTGGGATTCTTATCAATAGCCTCCTaGCCAAACAGTTCCTTGATT | + |
|
Preference number: 5 (lower is better) Translates to: ASGDRGYQNQTQGRLVGFLSIAS*PNSSLI Trigger: AATCAAGGAACTGTTTGGCAAGGAGGCTATTGATAA...GAATCCCACAAGCCTCCCTTGAGTTTGGTTCTGATAACCTCTGTCACCAGAAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081277.9 ENSMUST00000112724.3 |
||
| CDS-3UTR CAA 90 bp | AGCTTCAGGCACTCAGCCAAACACAAATGCCCATGTTTTGTAAGGAGAAAACCAAAGAGGAAAGGGTGGTaGGCATTAAACTCCACCCAA | + |
|
Preference number: 5 (lower is better) Translates to: SFRHSAKHKCPCFVRRKPKRKGW*ALNSTQ Trigger: TTGGGTGGAGTTTAATGCCAACCACCCTTTCCTCTT...TGGTTTTCTCCTTACAAAACATGGGCATTTGTGTTTGGCTGAGTGCCTGAAGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000081277.9 ENSMUST00000112724.3 |
||
| CDS GCA 90 bp | AAGCTGATGTTTGTTTCTGCCCTTCCAGAGAGCTGTCAGAAGCTTTaGTTTCACTTTGTGGAGAGGGATCATTGGGTTCTTTGTGTTCAT | + |
|
Preference number: 5 (lower is better) Translates to: KLMFVSALPESCQKL*FHFVERDHWVLCVH Trigger: ATGAACACAAAGAACCCAATGATCCCTCTCCACAAAGTGAAAGCAAAGCTTCTGACAGCTCTCTGGAAGGGCAGAAACAAACATCAGCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081277.9 ENSMUST00000112724.3 |
||
| CDS CCA 90 bp | TTTCTGCCCTTCCAGAGAGCTGTCAGAAGCTTTGCTTTCACTTTGTaGAGAGGGATCATTGGGTTCTTTGTGTTCATCCTTAGAAAGTTC | + |
|
Preference number: 5 (lower is better) Translates to: FLPFQRAVRSFAFTL*RGIIGFFVFILRKF Trigger: GAACTTTCTAAGGATGAACACAAAGAACCCAATGATCCCTCTCCACAAAGTGAAAGCAAAGCTTCTGACAGCTCTCTGGAAGGGCAGAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081277.9 ENSMUST00000112724.3 |
||
| CDS-3UTR CAA 90 bp | GGAGAAAGCAAGGCTGCTTCATTGATAGGTAGTGAGATCTGGCTTCTGGTGACAGGATCATTGGGTTCTTaGTGTTCATCCTTAGAAAGT | + |
|
Preference number: 5 (lower is better) Translates to: GESKAASLIGSEIWLLVTGSLGS*CSSLES Trigger: ACTTTCTAAGGATGAACACAAAGAACCCAATGATCC...TGTCACCAGAAGCCAGATCTCACTACCTATCAATGAAGCAGCCTTGCTTTCTCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081277.9 ENSMUST00000112724.3 |
||
| CDS-3UTR CAA 90 bp | AGCAAGGCTGCTTCATTGATAGGTAGTGAGATCTGGCTTCTGGTGACAGAGGTTCTACACTTTCGACTGTaGTGTGGAAAAATTCCGTTA | + |
|
Preference number: 5 (lower is better) Translates to: SKAASLIGSEIWLLVTEVLHFRL*CGKIPL Trigger: TAACGGAATTTTTCCACACAACAGTCGAAAGTGTAG...AACCTCTGTCACCAGAAGCCAGATCTCACTACCTATCAATGAAGCAGCCTTGCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000081277.9 ENSMUST00000112724.3 |
||
| CDS-3UTR CAA 90 bp | GTTATCAGAACCAAACTCAAGGGAGGCTTGTGGGATTCCGTGAACAACTGTAGCGATTTTACCTTGGCTTaGACTTTCAACCCAGAAGTT | + |
|
Preference number: 5 (lower is better) Translates to: VIRTKLKGGLWDSVNNCSDFTLA*TFNPEV Trigger: AACTTCTGGGTTGAAAGTCAAAGCCAAGGTAAAATC...GCTACAGTTGTTCACGGAATCCCACAAGCCTCCCTTGAGTTTGGTTCTGATAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081277.9 ENSMUST00000112724.3 |
||
| CDS-3UTR CAA 90 bp | GGAGAAAGCAAGGCTGCTTCATTGATAGGTAGTGAGATCTGGCTTCTGGTGACATTCCTTGATTTTACCTaGGCTTTGACTTTCAACCCA | + |
|
Preference number: 5 (lower is better) Translates to: GESKAASLIGSEIWLLVTFLDFT*ALTFNP Trigger: TGGGTTGAAAGTCAAAGCCAAGGTAAAATCAAGGAA...TGTCACCAGAAGCCAGATCTCACTACCTATCAATGAAGCAGCCTTGCTTTCTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081277.9 ENSMUST00000112724.3 |
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| CDS-3UTR CAA 90 bp | AGCTTCAGGCACTCAGCCAAACACAAATGCCCATGTTTTGTAAGGAGAAAACCATCATCAAAGACATCCTaGATGCCCATGTCCTGTAGA | + |
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Preference number: 5 (lower is better) Translates to: SFRHSAKHKCPCFVRRKPSSKTS*MPMSCR Trigger: TCTACAGGACATGGGCATCAAGGATGTCTTTGATGA...TGGTTTTCTCCTTACAAAACATGGGCATTTGTGTTTGGCTGAGTGCCTGAAGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000081277.9 ENSMUST00000112724.3 |
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| CDS TCA 90 bp | TTCGACTGTTGTGTGGAAAAATTCCGTTACGTCATCAGAGTATTCTaGGCAGATTGGAAATTCCTGCTCTCCATAGAGTCTGTTGGCCAT | + |
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Preference number: 5 (lower is better) Translates to: FDCCVEKFRYVIRVF*ADWKFLLSIESVGH Trigger: ATGGCCAACAGACTCTATGGAGAGCAGGAATTTCCAATCTGCTCAGAATACTCTGATGACGTAACGGAATTTTTCCACACAACAGTCGAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000081277.9 ENSMUST00000112724.3 |
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| CDS-3UTR CAA 90 bp | AGGCACTCAGCCAAACACAAATGCCCATGTTTTGTAAGGAGAAAACCATATTGCTGCAGGCTATTCACATaGTCTTCTGAGCAAGATGGA | + |
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Preference number: 5 (lower is better) Translates to: RHSAKHKCPCFVRRKPYCCRLFT*SSEQDG Trigger: TCCATCTTGCTCAGAAGACAATGTGAATAGCCTGCA...GCAATATGGTTTTCTCCTTACAAAACATGGGCATTTGTGTTTGGCTGAGTGCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000081277.9 ENSMUST00000112724.3 |
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| CDS TCA 90 bp | TGTGCCTGCAGCTCGTCGATAAAGCCAATTCTAAACTTACCCTTCTaGTTCATCATCTTTACAGTCTTCTTCTCGTTCTCATTGAGACAG | + |
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Preference number: 5 (lower is better) Translates to: CACSSSIKPILNLPF*FIIFTVFFSFSLRQ Trigger: CTGTCTCAATGAGAACGAGAAGAAGACTGTAAAGATGATGAATCAGAAGGGTAAGTTTAGAATTGGCTTTATCGACGAGCTGCAGGCACA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081277.9 ENSMUST00000112724.3 |
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| CDS-3UTR CAA 90 bp | GCACTCAGCCAAACACAAATGCCCATGTTTTGTAAGGAGAAAACCATATTGCCAAGTATTCTGAGCAGATaGGAAATTCCTGCTCTCCAT | + |
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Preference number: 5 (lower is better) Translates to: ALSQTQMPMFCKEKTILPSILSR*EIPALH Trigger: ATGGAGAGCAGGAATTTCCAATCTGCTCAGAATACT...TGGCAATATGGTTTTCTCCTTACAAAACATGGGCATTTGTGTTTGGCTGAGTGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000081277.9 ENSMUST00000112724.3 |
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| CDS-3UTR CAA 90 bp | AGCTTCAGGCACTCAGCCAAACACAAATGCCCATGTTTTGTAAGGAGAAAACCAGTCTTGTGGACAATTTaGGACAAATACAGATTGGGA | + |
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Preference number: 5 (lower is better) Translates to: SFRHSAKHKCPCFVRRKPVLWTI*DKYRLG Trigger: TCCCAATCTGTATTTGTCCAAAATTGTCCACAAGAC...TGGTTTTCTCCTTACAAAACATGGGCATTTGTGTTTGGCTGAGTGCCTGAAGCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000081277.9 ENSMUST00000112724.3 |
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| CDS-3UTR CAA 90 bp | AGGCACTCAGCCAAACACAAATGCCCATGTTTTGTAAGGAGAAAACCATATTGCGATTTTACCTTGGCTTaGACTTTCAACCCAGAAGTT | + |
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Preference number: 5 (lower is better) Translates to: RHSAKHKCPCFVRRKPYCDFTLA*TFNPEV Trigger: AACTTCTGGGTTGAAAGTCAAAGCCAAGGTAAAATC...GCAATATGGTTTTCTCCTTACAAAACATGGGCATTTGTGTTTGGCTGAGTGCCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000081277.9 ENSMUST00000112724.3 |
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| CDS-3UTR CAA 90 bp | GCACTCAGCCAAACACAAATGCCCATGTTTTGTAAGGAGAAAACCATATTGCCAGTCTTGTGGACAATTTaGGACAAATACAGATTGGGA | + |
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Preference number: 5 (lower is better) Translates to: ALSQTQMPMFCKEKTILPVLWTI*DKYRLG Trigger: TCCCAATCTGTATTTGTCCAAAATTGTCCACAAGAC...TGGCAATATGGTTTTCTCCTTACAAAACATGGGCATTTGTGTTTGGCTGAGTGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000081277.9 ENSMUST00000112724.3 |
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| CDS CCA 90 bp | TGTTGGCCATACTTAAAGTGTAATAAGATTTGTCTCTGTCTATTCTaGAGAGAAGTTTCCCAAAGTGGCAGCCAAGCAATTGATGGTCAT | + |
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Preference number: 5 (lower is better) Translates to: CWPYLKCNKICLCLF*REVSQSGSQAIDGH Trigger: ATGACCATCAATTGCTTGGCTGCCACTTTGGGAAACTTCTCTCCAGAATAGACAGAGACAAATCTTATTACACTTTAAGTATGGCCAACA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081277.9 ENSMUST00000112724.3 |
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| CDS CCA 90 bp | GATTTCTCAGAATCCTTCTGGAAATCTACACTTTCGACTGTTGTGTaGAAAAATTCCGTTACGTCATCAGAGTATTCTGAGCAGATTGGA | + |
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Preference number: 5 (lower is better) Translates to: DFSESFWKSTLSTVV*KNSVTSSEYSEQIG Trigger: TCCAATCTGCTCAGAATACTCTGATGACGTAACGGAATTTTTCCACACAACAGTCGAAAGTGTAGATTTCCAGAAGGATTCTGAGAAATC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000081277.9 ENSMUST00000112724.3 |
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| CDS CCA 90 bp | TCAACCCAGAAGTTAATCTCTTGTCTTGATTTCTCAGAATCCTTCTaGAAATCTACACTTTCGACTGTTGTGTGGAAAAATTCCGTTACG | + |
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Preference number: 5 (lower is better) Translates to: STQKLISCLDFSESF*KSTLSTVVWKNSVT Trigger: CGTAACGGAATTTTTCCACACAACAGTCGAAAGTGTAGATTTCCAGAAGGATTCTGAGAAATCAAGACAAGAGATTAACTTCTGGGTTGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000081277.9 ENSMUST00000112724.3 |
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| CDS TCA 72 bp | CCCTCGAGCTCCCAGGCGGACCATGCCAAAGGCAGCTaGGAGACTCAGAGGGCAGACGAAGATATTTTTATG | + |
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Preference number: 6 (lower is better) Translates to: PSSSQADHAKGS*ETQRADEDIFM Trigger: CATAAAAATATCTTCGTCTGCCCTCTGAGTCTCTCAGCTGCCTTTGGCATGGTCCGCCTGGGAGCTCGAGGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000081277.9 ENSMUST00000112724.3 |
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| CDS TCA 72 bp | GTCATTTGTAGATTCACCCTGCTGATCCTGAGAAGCTaGTGTTTGTTTCTGCCCTTCCAGAGAGCTGTCAGA | + |
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Preference number: 6 (lower is better) Translates to: VICRFTLLILRS*CLFLPFQRAVR Trigger: TCTGACAGCTCTCTGGAAGGGCAGAAACAAACATCAGCTTCTCAGGATCAGCAGGGTGAATCTACAAATGAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081277.9 ENSMUST00000112724.3 |
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| CDS GCA 72 bp | TTCCCCATGGCATACTTCATTTCCAGGATCTGTGCCTaGAGCTCGTCGATAAAGCCAATTCTAAACTTACCC | + |
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Preference number: 6 (lower is better) Translates to: FPMAYFISRICA*SSSIKPILNLP Trigger: GGGTAAGTTTAGAATTGGCTTTATCGACGAGCTGCAGGCACAGATCCTGGAAATGAAGTATGCCATGGGGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081277.9 ENSMUST00000112724.3 |
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| CDS CAA 72 bp | GTTTGTTTCTGCCCTTCCAGAGAGCTGTCAGAAGCTTaGCTTTCACTTTGTGGAGAGGGATCATTGGGTTCT | + |
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Preference number: 6 (lower is better) Translates to: VCFCPSRELSEA*LSLCGEGSLGS Trigger: AGAACCCAATGATCCCTCTCCACAAAGTGAAAGCAAAGCTTCTGACAGCTCTCTGGAAGGGCAGAAACAAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081277.9 ENSMUST00000112724.3 |
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| CDS CAA 72 bp | TCTGGAGAGAAGTTTCCCAAAGTGGCAGCCAAGCAATaGATGGTCATTTGTAGATTCACCCTGCTGATCCTG | + |
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Preference number: 6 (lower is better) Translates to: SGEKFPKVAAKQ*MVICRFTLLIL Trigger: CAGGATCAGCAGGGTGAATCTACAAATGACCATCAATTGCTTGGCTGCCACTTTGGGAAACTTCTCTCCAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081277.9 ENSMUST00000112724.3 |
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| CDS CAA 90 bp | GAAGCTGATGTTTGTTTCTGCCCTTCCAGAGAGCTGTCAGAAGCTTaGCTTTCACTTTGTGGAGAGGGATCATTGGGTTCTTTGTGTTCA | + |
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Preference number: 6 (lower is better) Translates to: EADVCFCPSRELSEA*LSLCGEGSLGSLCS Trigger: TGAACACAAAGAACCCAATGATCCCTCTCCACAAAGTGAAAGCAAAGCTTCTGACAGCTCTCTGGAAGGGCAGAAACAAACATCAGCTTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081277.9 ENSMUST00000112724.3 |
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| CDS GCA 72 bp | TTTGTTTCTGCCCTTCCAGAGAGCTGTCAGAAGCTTTaGTTTCACTTTGTGGAGAGGGATCATTGGGTTCTT | + |
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Preference number: 6 (lower is better) Translates to: FVSALPESCQKL*FHFVERDHWVL Trigger: AAGAACCCAATGATCCCTCTCCACAAAGTGAAAGCAAAGCTTCTGACAGCTCTCTGGAAGGGCAGAAACAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081277.9 ENSMUST00000112724.3 |
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| CDS CAA 72 bp | CCAGTAAGGTCAGCCTTCGTTTCATCAAAGACATCCTaGATGCCCATGTCCTGTAGAATCGACTTGAGATCA | + |
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Preference number: 6 (lower is better) Translates to: PVRSAFVSSKTS*MPMSCRIDLRS Trigger: TGATCTCAAGTCGATTCTACAGGACATGGGCATCAAGGATGTCTTTGATGAAACGAAGGCTGACCTTACTGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081277.9 ENSMUST00000112724.3 |
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| CDS CCA 72 bp | TTCCAGAGAGCTGTCAGAAGCTTTGCTTTCACTTTGTaGAGAGGGATCATTGGGTTCTTTGTGTTCATCCTT | + |
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Preference number: 6 (lower is better) Translates to: FQRAVRSFAFTL*RGIIGFFVFIL Trigger: AAGGATGAACACAAAGAACCCAATGATCCCTCTCCACAAAGTGAAAGCAAAGCTTCTGACAGCTCTCTGGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081277.9 ENSMUST00000112724.3 |
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| CDS CAA 90 bp | GTCTTGATTTCTCAGAATCCTTCTGGAAATCTACACTTTCGACTGTaGTGTGGAAAAATTCCGTTACGTCATCAGAGTATTCTGAGCAGA | + |
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Preference number: 6 (lower is better) Translates to: VLISQNPSGNLHFRL*CGKIPLRHQSILSR Trigger: TCTGCTCAGAATACTCTGATGACGTAACGGAATTTTTCCACACAACAGTCGAAAGTGTAGATTTCCAGAAGGATTCTGAGAAATCAAGAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000081277.9 ENSMUST00000112724.3 |
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| CDS CAA 90 bp | AGAGAGCTGTCAGAAGCTTTGCTTTCACTTTGTGGAGAGGGATCATaGGGTTCTTTGTGTTCATCCTTAGAAAGTTCATTGAAATGTAAT | + |
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Preference number: 6 (lower is better) Translates to: RELSEALLSLCGEGS*GSLCSSLESSLKCN Trigger: ATTACATTTCAATGAACTTTCTAAGGATGAACACAAAGAACCCAATGATCCCTCTCCACAAAGTGAAAGCAAAGCTTCTGACAGCTCTCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081277.9 ENSMUST00000112724.3 |
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| CDS TCA 72 bp | GATTCATCATCTTTACAGTCTTCTTCTCGTTCTCATTaGGACAGAAAGATGCATCAACGGTGTTTTCAGAGT | + |
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Preference number: 6 (lower is better) Translates to: DSSSLQSSSRSH*DRKMHQRCFQS Trigger: ACTCTGAAAACACCGTTGATGCATCTTTCTGTCTCAATGAGAACGAGAAGAAGACTGTAAAGATGATGAATC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081277.9 ENSMUST00000112724.3 |
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| CDS TCA 72 bp | AGCTCGTCGATAAAGCCAATTCTAAACTTACCCTTCTaGTTCATCATCTTTACAGTCTTCTTCTCGTTCTCA | + |
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Preference number: 6 (lower is better) Translates to: SSSIKPILNLPF*FIIFTVFFSFS Trigger: TGAGAACGAGAAGAAGACTGTAAAGATGATGAATCAGAAGGGTAAGTTTAGAATTGGCTTTATCGACGAGCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081277.9 ENSMUST00000112724.3 |
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| CDS CAA 72 bp | TCTCAGAATCCTTCTGGAAATCTACACTTTCGACTGTaGTGTGGAAAAATTCCGTTACGTCATCAGAGTATT | + |
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Preference number: 6 (lower is better) Translates to: SQNPSGNLHFRL*CGKIPLRHQSI Trigger: AATACTCTGATGACGTAACGGAATTTTTCCACACAACAGTCGAAAGTGTAGATTTCCAGAAGGATTCTGAGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000081277.9 ENSMUST00000112724.3 |
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| CDS CAA 72 bp | TTGCTTTCACTTTGTGGAGAGGGATCATTGGGTTCTTaGTGTTCATCCTTAGAAAGTTCATTGAAATGTAAT | + |
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Preference number: 6 (lower is better) Translates to: LLSLCGEGSLGS*CSSLESSLKCN Trigger: ATTACATTTCAATGAACTTTCTAAGGATGAACACAAAGAACCCAATGATCCCTCTCCACAAAGTGAAAGCAA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081277.9 ENSMUST00000112724.3 |
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