RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SERPINB10 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000092572

Ensembl transcript IDs: ENSMUST00000182198.8, ENSMUST00000194951.2

Found 17 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 72 bp AAGCATGAAATGTGTATAGGCTATGGGCTGATTTTGTaGTGTCTGATTTTCCGTCTCATAATATGGGTTTTT +
Preference number: 3 (lower is better)
Translates to: KHEMCIGYGLIL*CLIFRLIIWVF
Trigger: AAAAACCCATATTATGAGACGGAAAATCAGACATCACAAAATCAGCCCATAGCCTATACACATTTCATGCTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000182198.8
CDS TCA 90 bp GCTGTTCCAGGCCATCTATTGCTTCTGGAAGCAGTAGAAGCAGGCTaGGGTCACGGTTCTGATAGTGGAGTTGAAGGCCTATGGTTTGCA +
Preference number: 5 (lower is better)
Translates to: AVPGHLLLLEAVEAG*GHGSDSGVEGLWFA
Trigger: TGCAAACCATAGGCCTTCAACTCCACTATCAGAACCGTGACCTCAGCCTGCTTCTACTGCTTCCAGAAGCAATAGATGGCCTGGAACAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000194951.2
CDS TCA 90 bp TCATTGACATCATTTGCACTGGTTTGCTTGTGGTCTTGTTTACTCTaGAAGGCCTTTCGGTGGTGCTTTTCACTGAGAACTGATGCTCCC +
Preference number: 5 (lower is better)
Translates to: SLTSFALVCLWSCLL*KAFRWCFSLRTDAP
Trigger: GGGAGCATCAGTTCTCAGTGAAAAGCACCACCGAAAGGCCTTTCAGAGTAAACAAGACCACAAGCAAACCAGTGCAAATGATGTCAATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000194951.2
CDS TCA 90 bp TTTTCACTATCAGGACAAGATTTGAAGTCTTCAACACTGCTAAATTaGAGTACCTGGGCCATCTGGTCTGCAGTAGTCCCTTTGGTACCC +
Preference number: 5 (lower is better)
Translates to: FSLSGQDLKSSTLLN*STWAIWSAVVPLVP
Trigger: GGGTACCAAAGGGACTACTGCAGACCAGATGGCCCAGGTACTTCAATTTAGCAGTGTTGAAGACTTCAAATCTTGTCCTGATAGTGAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000194951.2
CDS CCA 90 bp CTCCTTCCTGATCTGTCCAGAAGCTTCAACAAAGTTAACAGATTGTaGTTCTGCCCCAAAGTACGTTTTCATGTCCTCCAAATATTTATT +
Preference number: 5 (lower is better)
Translates to: LLPDLSRSFNKVNRL*FCPKVRFHVLQIFI
Trigger: AATAAATATTTGGAGGACATGAAAACGTACTTTGGGGCAGAACCACAATCTGTTAACTTTGTTGAAGCTTCTGGACAGATCAGGAAGGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000194951.2
CDS TCA 72 bp GGCCATCTATTGCTTCTGGAAGCAGTAGAAGCAGGCTaGGGTCACGGTTCTGATAGTGGAGTTGAAGGCCTA +
Preference number: 6 (lower is better)
Translates to: GHLLLLEAVEAG*GHGSDSGVEGL
Trigger: TAGGCCTTCAACTCCACTATCAGAACCGTGACCTCAGCCTGCTTCTACTGCTTCCAGAAGCAATAGATGGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000194951.2
CDS CAA 72 bp GGAATTTTACCTCCAGTCTGGCTTCCAACCCAGGAGTaGATCTCCTTCCTGATCTGTCCAGAAGCTTCAACA +
Preference number: 6 (lower is better)
Translates to: GILPPVWLPTQE*ISFLICPEAST
Trigger: TGTTGAAGCTTCTGGACAGATCAGGAAGGAGATCAACTCCTGGGTTGGAAGCCAGACTGGAGGTAAAATTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000194951.2
CDS CAA 72 bp GTCACGGTTCTGATAGTGGAGTTGAAGGCCTATGGTTaGCAGCTCCTCAATGTGGAAGACTTGAAGACTCTG +
Preference number: 6 (lower is better)
Translates to: VTVLIVELKAYG*QLLNVEDLKTL
Trigger: CAGAGTCTTCAAGTCTTCCACATTGAGGAGCTGCAAACCATAGGCCTTCAACTCCACTATCAGAACCGTGAC
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000194951.2
CDS TCA 72 bp CTGAAGTCATGTTTGAGAAATCAGCTTTACTCTGGCTaGAAACGTCGGTCATTCCCATACCTCTCAGGGCTG +
Preference number: 6 (lower is better)
Translates to: LKSCLRNQLYSG*KRRSFPYLSGL
Trigger: CAGCCCTGAGAGGTATGGGAATGACCGACGTTTTCAGCCAGAGTAAAGCTGATTTCTCAAACATGACTTCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000194951.2
CDS TCA 72 bp TCAGGACAAGATTTGAAGTCTTCAACACTGCTAAATTaGAGTACCTGGGCCATCTGGTCTGCAGTAGTCCCT +
Preference number: 6 (lower is better)
Translates to: SGQDLKSSTLLN*STWAIWSAVVP
Trigger: AGGGACTACTGCAGACCAGATGGCCCAGGTACTTCAATTTAGCAGTGTTGAAGACTTCAAATCTTGTCCTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000194951.2
CDS TCA 72 bp GGCATTCACCAGAACCATTTTAGTCTTGGTGTCGACTaGGTCATCTGGGAGGAGATTTGGAATTTTACCTCC +
Preference number: 6 (lower is better)
Translates to: GIHQNHFSLGVD*VIWEEIWNFTS
Trigger: GGAGGTAAAATTCCAAATCTCCTCCCAGATGACTCAGTCGACACCAAGACTAAAATGGTTCTGGTGAATGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000194951.2
CDS CCA 72 bp CTCTCTGAAGTCATGTTTGAGAAATCAGCTTTACTCTaGCTGAAAACGTCGGTCATTCCCATACCTCTCAGG +
Preference number: 6 (lower is better)
Translates to: LSEVMFEKSALL*LKTSVIPIPLR
Trigger: CCTGAGAGGTATGGGAATGACCGACGTTTTCAGCCAGAGTAAAGCTGATTTCTCAAACATGACTTCAGAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000194951.2
CDS CAA 90 bp CTTTTCACTATCAGGACAAGATTTGAAGTCTTCAACACTGCTAAATaGAAGTACCTGGGCCATCTGGTCTGCAGTAGTCCCTTTGGTACC +
Preference number: 6 (lower is better)
Translates to: LFTIRTRFEVFNTAK*KYLGHLVCSSPFGT
Trigger: GGTACCAAAGGGACTACTGCAGACCAGATGGCCCAGGTACTTCAATTTAGCAGTGTTGAAGACTTCAAATCTTGTCCTGATAGTGAAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000194951.2
CDS CAA 90 bp AGGAGATTTGGAATTTTACCTCCAGTCTGGCTTCCAACCCAGGAGTaGATCTCCTTCCTGATCTGTCCAGAAGCTTCAACAAAGTTAACA +
Preference number: 6 (lower is better)
Translates to: RRFGILPPVWLPTQE*ISFLICPEASTKLT
Trigger: TGTTAACTTTGTTGAAGCTTCTGGACAGATCAGGAAGGAGATCAACTCCTGGGTTGGAAGCCAGACTGGAGGTAAAATTCCAAATCTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000194951.2
CDS TCA 72 bp TCATTTGCACTGGTTTGCTTGTGGTCTTGTTTACTCTaGAAGGCCTTTCGGTGGTGCTTTTCACTGAGAACT +
Preference number: 6 (lower is better)
Translates to: SFALVCLWSCLL*KAFRWCFSLRT
Trigger: AGTTCTCAGTGAAAAGCACCACCGAAAGGCCTTTCAGAGTAAACAAGACCACAAGCAAACCAGTGCAAATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000194951.2
CDS CCA 72 bp GAATTTCCAGGTTTGAGGATTTCAGCAGCAAGGGTCTaGAAGTCGGACTGTATTTCTTCAAATTTGCCTGAG +
Preference number: 6 (lower is better)
Translates to: EFPGLRISAARV*KSDCISSNLPE
Trigger: CTCAGGCAAATTTGAAGAAATACAGTCCGACTTCCAGACCCTTGCTGCTGAAATCCTCAAACCTGGAAATTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000194951.2
CDS GCA 72 bp TCCAGAAGCTTCAACAAAGTTAACAGATTGTGGTTCTaGCCCAAAGTACGTTTTCATGTCCTCCAAATATTT +
Preference number: 6 (lower is better)
Translates to: SRSFNKVNRLWF*PKVRFHVLQIF
Trigger: AAATATTTGGAGGACATGAAAACGTACTTTGGGGCAGAACCACAATCTGTTAACTTTGTTGAAGCTTCTGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000194951.2