Pregenerated sensors for SERPINA9 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000058260Ensembl transcript IDs: ENSMUST00000058464.5, ENSMUST00000164023.2
Found 101 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CTGTGTCACCCTCTCTCCATTTACCTGCACGCCCATAACACACAATaGTCCAGTCGTAGGGCCTTCCCACTGCCCCTCCCATGCCTCTCC | + |
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Preference number: 1 (lower is better) Translates to: LCHPLSIYLHAHNTQ*SSRRAFPLPLPCLS Trigger: GGAGAGGCATGGGAGGGGCAGTGGGAAGGCCCTACGACTGGAGCATTGTGTGTTATGGGCGTGCAGGTAAATGGAGAGAGGGTGACACAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058464.5 |
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| 3UTR CCA 90 bp | TCCTGCTTAAGAAACCCAGTGAGGTTCCCATTCCCATCCCTTGCCTaGCCTAGGCGGCTTCCCAGGCAGTGTGTGTTCCTGTGTCACCCT | + |
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Preference number: 1 (lower is better) Translates to: SCLRNPVRFPFPSLA*PRRLPRQCVFLCHP Trigger: AGGGTGACACAGGAACACACACTGCCTGGGAAGCCGCCTAGGCCAGGCAAGGGATGGGAATGGGAACCTCACTGGGTTTCTTAAGCAGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058464.5 |
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| 3UTR GCA 90 bp | ATTCACACCTCACATACATTCAAGCCTCCCAACCTGCACTTTGCTTaGTTCCCAGCAGAGGGCGCCGAAACCCAACTTTCTTCTGTAAGC | + |
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Preference number: 1 (lower is better) Translates to: IHTSHTFKPPNLHFA*FPAEGAETQLSSVS Trigger: GCTTACAGAAGAAAGTTGGGTTTCGGCGCCCTCTGCTGGGAAGCAAGCAAAGTGCAGGTTGGGAGGCTTGAATGTATGTGAGGTGTGAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058464.5 |
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| 3UTR CCA 90 bp | GTCAATATAAACAGCCACAGTCAGGGTGTCTTGGGGCCAGAAAGGTaGCCACATTGGAGAGGTCTTTACAACCCATTCTGCACTGACACT | + |
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Preference number: 1 (lower is better) Translates to: VNINSHSQGVLGPER*PHWRGLYNPFCTDT Trigger: AGTGTCAGTGCAGAATGGGTTGTAAAGACCTCTCCAATGTGGCCACCTTTCTGGCCCCAAGACACCCTGACTGTGGCTGTTTATATTGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058464.5 |
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| 3UTR TCA 90 bp | ATCATTTCTAAGAGCTCCCTGGAACTCTTAGAATGGAGCCCTGCCTaGCCTGCCACATTCCAGGAAAAGGCTTTATGGGAAAACAGGTGG | + |
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Preference number: 1 (lower is better) Translates to: IISKSSLELLEWSPA*PATFQEKALWENRW Trigger: CCACCTGTTTTCCCATAAAGCCTTTTCCTGGAATGTGGCAGGTCAGGCAGGGCTCCATTCTAAGAGTTCCAGGGAGCTCTTAGAAATGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058464.5 |
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| 3UTR CCA 90 bp | CTTGATGTTCTGTTACTGATGATTTTGAACTCATGGACCAGCCCATaGGGACAAGGTTTTCCGATTCACACCTCACATACATTCAAGCCT | + |
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Preference number: 1 (lower is better) Translates to: LDVLLLMILNSWTSP*GQGFPIHTSHTFKP Trigger: AGGCTTGAATGTATGTGAGGTGTGAATCGGAAAACCTTGTCCCCATGGGCTGGTCCATGAGTTCAAAATCATCAGTAACAGAACATCAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058464.5 |
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| 3UTR-3UTR CCA 90 bp | CACGCCCATAACACACAATGCTCCAGTCGTAGGGCCTTCCCACTGCCCCTCCCAGGTGGGAGGGGCCACTaGCAGGGTGACCAGGCCCTG | + |
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Preference number: 2 (lower is better) Translates to: HAHNTQCSSRRAFPLPLPGGRGH*QGDQAL Trigger: CAGGGCCTGGTCACCCTGCCAGTGGCCCCTCCCACC...TGGGAGGGGCAGTGGGAAGGCCCTACGACTGGAGCATTGTGTGTTATGGGCGTG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058464.5 |
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| 3UTR-3UTR GCA 90 bp | CCCTTGCCTGGCCTAGGCGGCTTCCCAGGCAGTGTGTGTTCCTGTGTCACCCTCCTCCTAGACCCAGCATaGCAGGAGCCATTGAAGAGC | + |
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Preference number: 2 (lower is better) Translates to: PLPGLGGFPGSVCSCVTLLLDPA*QEPLKS Trigger: GCTCTTCAATGGCTCCTGGCATGCTGGGTCTAGGAG...GAGGGTGACACAGGAACACACACTGCCTGGGAAGCCGCCTAGGCCAGGCAAGGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058464.5 |
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| 3UTR-3UTR GCA 90 bp | AGCTCAGCTCTGCATCGTGAAGGCTGCTTAACACTGAAGAGCCCATGTTCTGCAGCAGGGAGCTGCCTCTaGCTCCAGGGCCCAGGGGGC | + |
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Preference number: 2 (lower is better) Translates to: SSALHREGCLTLKSPCSAAGSCL*LQGPGG Trigger: GCCCCCTGGGCCCTGGAGGCAGAGGCAGCTCCCTGC...TGCAGAACATGGGCTCTTCAGTGTTAAGCAGCCTTCACGATGCAGAGCTGAGCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000058464.5 |
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| 3UTR-3UTR GCA 90 bp | CCCTTGCCTGGCCTAGGCGGCTTCCCAGGCAGTGTGTGTTCCTGTGTCACCCTCAGGGTGACCAGGCCCTaGTGTCTCTTCTATGATTGG | + |
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Preference number: 2 (lower is better) Translates to: PLPGLGGFPGSVCSCVTLRVTRP*CLFYDW Trigger: CCAATCATAGAAGAGACAGCAGGGCCTGGTCACCCT...GAGGGTGACACAGGAACACACACTGCCTGGGAAGCCGCCTAGGCCAGGCAAGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058464.5 |
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| 3UTR-3UTR CCA 90 bp | TCACATACATTCAAGCCTCCCAACCTGCACTTTGCTTGCTTCCCAGCAGAGGGCCCCACACAGGACACCTaGCAGTGGGGGCGGGGCTGT | + |
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Preference number: 2 (lower is better) Translates to: SHTFKPPNLHFACFPAEGPTQDT*QWGRGC Trigger: ACAGCCCCGCCCCCACTGCCAGGTGTCCTGTGTGGG...GCCCTCTGCTGGGAAGCAAGCAAAGTGCAGGTTGGGAGGCTTGAATGTATGTGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000058464.5 |
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| 3UTR-3UTR CCA 90 bp | AGCTCAGCTCTGCATCGTGAAGGCTGCTTAACACTGAAGAGCCCATGTTCTGCAACAGTCAGGGTGTCTTaGGGCCAGAAAGGTGGCCAC | + |
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Preference number: 2 (lower is better) Translates to: SSALHREGCLTLKSPCSATVRVS*GQKGGH Trigger: GTGGCCACCTTTCTGGCCCCAAGACACCCTGACTGT...TGCAGAACATGGGCTCTTCAGTGTTAAGCAGCCTTCACGATGCAGAGCTGAGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058464.5 |
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| 3UTR-3UTR CCA 90 bp | ATACATTCAAGCCTCCCAACCTGCACTTTGCTTGCTTCCCAGCAGAGGGCGCCGGAAAGGTGGCCACATTaGAGAGGTCTTTACAACCCA | + |
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Preference number: 2 (lower is better) Translates to: IHSSLPTCTLLASQQRAPERWPH*RGLYNP Trigger: TGGGTTGTAAAGACCTCTCCAATGTGGCCACCTTTC...CGGCGCCCTCTGCTGGGAAGCAAGCAAAGTGCAGGTTGGGAGGCTTGAATGTAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058464.5 |
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| 3UTR CAA 90 bp | TTCCGATTCACACCTCACATACATTCAAGCCTCCCAACCTGCACTTaGCTTGCTTCCCAGCAGAGGGCGCCGAAACCCAACTTTCTTCTG | + |
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Preference number: 2 (lower is better) Translates to: FRFTPHIHSSLPTCT*LASQQRAPKPNFLL Trigger: CAGAAGAAAGTTGGGTTTCGGCGCCCTCTGCTGGGAAGCAAGCAAAGTGCAGGTTGGGAGGCTTGAATGTATGTGAGGTGTGAATCGGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058464.5 |
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| 3UTR-3UTR TCA 90 bp | ATACATTCAAGCCTCCCAACCTGCACTTTGCTTGCTTCCCAGCAGAGGGCGCCGACATTTCCTCGATATTaGATGTGCTCTCTCTCTCCC | + |
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Preference number: 2 (lower is better) Translates to: IHSSLPTCTLLASQQRAPTFPRY*MCSLSP Trigger: GGGAGAGAGAGAGCACATTCAATATCGAGGAAATGT...CGGCGCCCTCTGCTGGGAAGCAAGCAAAGTGCAGGTTGGGAGGCTTGAATGTAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058464.5 |
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| 3UTR CAA 90 bp | GATTCACACCTCACATACATTCAAGCCTCCCAACCTGCACTTTGCTaGCTTCCCAGCAGAGGGCGCCGAAACCCAACTTTCTTCTGTAAG | + |
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Preference number: 2 (lower is better) Translates to: DSHLTYIQASQPALC*LPSRGRRNPTFFCK Trigger: CTTACAGAAGAAAGTTGGGTTTCGGCGCCCTCTGCTGGGAAGCAAGCAAAGTGCAGGTTGGGAGGCTTGAATGTATGTGAGGTGTGAATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058464.5 |
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| 3UTR-3UTR CCA 90 bp | AAAAAGAACCTGAGCTTTGCTAAAGGTTGCAGGGGACATGCCAGTGCTGTGAAATTATGGGAAAACAGGTaGGAGGGGCCACTGGCAGGG | + |
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Preference number: 2 (lower is better) Translates to: KKNLSFAKGCRGHASAVKLWENR*EGPLAG Trigger: CCCTGCCAGTGGCCCCTCCCACCTGTTTTCCCATAA...TTTCACAGCACTGGCATGTCCCCTGCAACCTTTAGCAAAGCTCAGGTTCTTTTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000058464.5 |
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| 3UTR-3UTR CCA 90 bp | GTTAGAATAATAGTTACTCGTCTTGTGGTCCTGGCCAATAAACAACCTGGAAAACAGGACACCTGGCAGTaGGGGCGGGGCTGTGAAGGC | + |
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Preference number: 2 (lower is better) Translates to: VRIIVTRLVVLANKQPGKQDTWQ*GRGCEG Trigger: GCCTTCACAGCCCCGCCCCCACTGCCAGGTGTCCTG...TTTTCCAGGTTGTTTATTGGCCAGGACCACAAGACGAGTAACTATTATTCTAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000058464.5 |
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| 3UTR-3UTR TCA 90 bp | CTTACCCTAATTTGTTACAACCTCTTTGTGCACATTTCCTCGATATTGAATGTGGGGCCACTGGCAGGGTaGCCAGGCCCTGCTGTCTCT | + |
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Preference number: 2 (lower is better) Translates to: LTLICYNLFVHISSILNVGPLAG*PGPAVS Trigger: AGAGACAGCAGGGCCTGGTCACCCTGCCAGTGGCCC...CACATTCAATATCGAGGAAATGTGCACAAAGAGGTTGTAACAAATTAGGGTAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058464.5 |
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| 3UTR-3UTR TCA 90 bp | GTTAGAATAATAGTTACTCGTCTTGTGGTCCTGGCCAATAAACAACCTGGAAAATCGGTGGCTGGAGCTTaGGGCAGTGGGTCGCACTGC | + |
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Preference number: 2 (lower is better) Translates to: VRIIVTRLVVLANKQPGKSVAGA*GSGSHC Trigger: GCAGTGCGACCCACTGCCTCAAGCTCCAGCCACCGA...TTTTCCAGGTTGTTTATTGGCCAGGACCACAAGACGAGTAACTATTATTCTAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058464.5 |
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| 3UTR-3UTR GCA 90 bp | AGCTCAGCTCTGCATCGTGAAGGCTGCTTAACACTGAAGAGCCCATGTTCTGCATTCAGGTTTATTGAATaGAGTGCTGGGAGCCAGCCA | + |
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Preference number: 2 (lower is better) Translates to: SSALHREGCLTLKSPCSAFRFIE*SAGSQP Trigger: TGGCTGGCTCCCAGCACTGCATTCAATAAACCTGAA...TGCAGAACATGGGCTCTTCAGTGTTAAGCAGCCTTCACGATGCAGAGCTGAGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058464.5 |
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| 3UTR-3UTR CCA 90 bp | TTACCACTGAGTCCACATTTCAGGTTTATTGAATGCAGTGCTGGGAGCCAGCCACAGGAAAAGGCTTTATaGGAAAACAGGTGGGAGGGG | + |
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Preference number: 2 (lower is better) Translates to: LPLSPHFRFIECSAGSQPQEKAL*ENRWEG Trigger: CCCCTCCCACCTGTTTTCCCATAAAGCCTTTTCCTG...TGGCTGGCTCCCAGCACTGCATTCAATAAACCTGAAATGTGGACTCAGTGGTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058464.5 |
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| 3UTR-3UTR CCA 90 bp | AAAAAGAACCTGAGCTTTGCTAAAGGTTGCAGGGGACATGCCAGTGCTGTGAAAAGGGGGCATTCAGTGTaGCTTTCAGGATATGCCAAG | + |
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Preference number: 2 (lower is better) Translates to: KKNLSFAKGCRGHASAVKRGHSV*LSGYAK Trigger: CTTGGCATATCCTGAAAGCCACACTGAATGCCCCCT...TTTCACAGCACTGGCATGTCCCCTGCAACCTTTAGCAAAGCTCAGGTTCTTTTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000058464.5 |
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| 3UTR-3UTR GCA 90 bp | AAAAAGAACCTGAGCTTTGCTAAAGGTTGCAGGGGACATGCCAGTGCTGTGAAACACTTGATATGTTCCTaGTTAAGAAACCCAGTGAGG | + |
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Preference number: 2 (lower is better) Translates to: KKNLSFAKGCRGHASAVKHLICS*LRNPVR Trigger: CCTCACTGGGTTTCTTAAGCAGGAACATATCAAGTG...TTTCACAGCACTGGCATGTCCCCTGCAACCTTTAGCAAAGCTCAGGTTCTTTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000058464.5 |
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| 3UTR-3UTR GCA 90 bp | AAAAAGAACCTGAGCTTTGCTAAAGGTTGCAGGGGACATGCCAGTGCTGTGAAAGTGGCTTTCAGGATATaGCAAGCTGTTGTCAATATA | + |
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Preference number: 2 (lower is better) Translates to: KKNLSFAKGCRGHASAVKVAFRI*QAVVNI Trigger: TATATTGACAACAGCTTGGCATATCCTGAAAGCCAC...TTTCACAGCACTGGCATGTCCCCTGCAACCTTTAGCAAAGCTCAGGTTCTTTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000058464.5 |
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| 3UTR-3UTR GCA 90 bp | GTTAGAATAATAGTTACTCGTCTTGTGGTCCTGGCCAATAAACAACCTGGAAAAGGATCAAGGGTACAGTaGAGAGAAGTTTCGGTGGCT | + |
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Preference number: 2 (lower is better) Translates to: VRIIVTRLVVLANKQPGKGSRVQ*REVSVA Trigger: AGCCACCGAAACTTCTCTGCACTGTACCCTTGATCC...TTTTCCAGGTTGTTTATTGGCCAGGACCACAAGACGAGTAACTATTATTCTAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058464.5 |
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| 3UTR-3UTR TCA 90 bp | CTTACCCTAATTTGTTACAACCTCTTTGTGCACATTTCCTCGATATTGAATGTGACATTTCAGGTTTATTaGATGCAGTGCTGGGAGCCA | + |
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Preference number: 2 (lower is better) Translates to: LTLICYNLFVHISSILNVTFQVY*MQCWEP Trigger: TGGCTCCCAGCACTGCATTCAATAAACCTGAAATGT...CACATTCAATATCGAGGAAATGTGCACAAAGAGGTTGTAACAAATTAGGGTAAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058464.5 |
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| 3UTR GCA 72 bp | TGCTCCAGTCGTAGGGCCTTCCCACTGCCCCTCCCATaGCTCTCCTATGAGTGTCCCCACTATCCTACACAG | + |
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Preference number: 3 (lower is better) Translates to: CSSRRAFPLPLP*LSYECPHYPTQ Trigger: CTGTGTAGGATAGTGGGGACACTCATAGGAGAGGCATGGGAGGGGCAGTGGGAAGGCCCTACGACTGGAGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058464.5 |
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| 3UTR CCA 72 bp | AGAAACCCAGTGAGGTTCCCATTCCCATCCCTTGCCTaGCCTAGGCGGCTTCCCAGGCAGTGTGTGTTCCTG | + |
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Preference number: 3 (lower is better) Translates to: RNPVRFPFPSLA*PRRLPRQCVFL Trigger: CAGGAACACACACTGCCTGGGAAGCCGCCTAGGCCAGGCAAGGGATGGGAATGGGAACCTCACTGGGTTTCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058464.5 |
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| 3UTR-3UTR CAA 90 bp | CGTTGGACAAGTGACTCTGGAACTGTAGGAACAGCCCAGAGCCTGGTACTCTGGCAACCTGCACTTTGCTaGCTTCCCAGCAGAGGGCGC | + |
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Preference number: 3 (lower is better) Translates to: RWTSDSGTVGTAQSLVLWQPALC*LPSRGR Trigger: GCGCCCTCTGCTGGGAAGCAAGCAAAGTGCAGGTTG...CCAGAGTACCAGGCTCTGGGCTGTTCCTACAGTTCCAGAGTCACTTGTCCAACG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058464.5 |
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| 3UTR GCA 72 bp | CCTCTCTCCATTTACCTGCACGCCCATAACACACAATaGTCCAGTCGTAGGGCCTTCCCACTGCCCCTCCCA | + |
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Preference number: 3 (lower is better) Translates to: PLSIYLHAHNTQ*SSRRAFPLPLP Trigger: TGGGAGGGGCAGTGGGAAGGCCCTACGACTGGAGCATTGTGTGTTATGGGCGTGCAGGTAAATGGAGAGAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058464.5 |
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| 3UTR GCA 72 bp | GGCCACGGAGCCAGCTCAGCTCTGCATCGTGAAGGCTaGTTAACACTGAAGAGCCCATGTTCTGCACACCCT | + |
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Preference number: 3 (lower is better) Translates to: GHGASSALHREG*LTLKSPCSAHP Trigger: AGGGTGTGCAGAACATGGGCTCTTCAGTGTTAAGCAGCCTTCACGATGCAGAGCTGAGCTGGCTCCGTGGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058464.5 |
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| 3UTR GCA 72 bp | CCTCTCCCTCTCCCTCTCCCTCTCCTAGACCCAGCATaGCAGGAGCCATTGAAGAGCTCAACTGAGCAAATG | + |
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Preference number: 3 (lower is better) Translates to: PLPLPLPLLDPA*QEPLKSSTEQM Trigger: CATTTGCTCAGTTGAGCTCTTCAATGGCTCCTGGCATGCTGGGTCTAGGAGAGGGAGAGGGAGAGGGAGAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058464.5 |
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| 3UTR-3UTR CAA 90 bp | TCACATACATTCAAGCCTCCCAACCTGCACTTTGCTTGCTTCCCAGCAGAGGGCGACAACAGGCTCCTGTaGGAGTCAAGGGGGCCTCAA | + |
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Preference number: 3 (lower is better) Translates to: SHTFKPPNLHFACFPAEGDNRLL*ESRGPQ Trigger: TTGAGGCCCCCTTGACTCCAACAGGAGCCTGTTGTC...GCCCTCTGCTGGGAAGCAAGCAAAGTGCAGGTTGGGAGGCTTGAATGTATGTGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000058464.5 |
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| 3UTR-3UTR CAA 90 bp | ATACATTCAAGCCTCCCAACCTGCACTTTGCTTGCTTCCCAGCAGAGGGCGCCGGCATGCCAGGAGCCATaGAAGAGCTCAACTGAGCAA | + |
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Preference number: 3 (lower is better) Translates to: IHSSLPTCTLLASQQRAPACQEP*KSSTEQ Trigger: TTGCTCAGTTGAGCTCTTCAATGGCTCCTGGCATGC...CGGCGCCCTCTGCTGGGAAGCAAGCAAAGTGCAGGTTGGGAGGCTTGAATGTAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058464.5 |
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| 3UTR TCA 72 bp | CACTGGCAGGGTGACCAGGCCCTGCTGTCTCTTCTATaGTTGGGCCCCATTGTGCTAATCCTTAGGGACAAC | + |
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Preference number: 3 (lower is better) Translates to: HWQGDQALLSLL*LGPIVLILRDN Trigger: GTTGTCCCTAAGGATTAGCACAATGGGGCCCAATCATAGAAGAGACAGCAGGGCCTGGTCACCCTGCCAGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058464.5 |
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| 3UTR TCA 72 bp | TGGAGTCAAGGGGGCCTCAAGCAAGGAAGCGAGACTTaGTGTCACCCTGCAATCGTCTTCCAACACACACCT | + |
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Preference number: 3 (lower is better) Translates to: WSQGGLKQGSET*CHPAIVFQHTP Trigger: AGGTGTGTGTTGGAAGACGATTGCAGGGTGACATCAAGTCTCGCTTCCTTGCTTGAGGCCCCCTTGACTCCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000058464.5 |
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| 3UTR GCA 72 bp | CGATTCACACCTCACATACATTCAAGCCTCCCAACCTaGACTTTGCTTGCTTCCCAGCAGAGGGCGCCGAAA | + |
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Preference number: 3 (lower is better) Translates to: RFTPHIHSSLPT*TLLASQQRAPK Trigger: TTTCGGCGCCCTCTGCTGGGAAGCAAGCAAAGTGCAGGTTGGGAGGCTTGAATGTATGTGAGGTGTGAATCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058464.5 |
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| 3UTR CCA 72 bp | AACAGCCACAGTCAGGGTGTCTTGGGGCCAGAAAGGTaGCCACATTGGAGAGGTCTTTACAACCCATTCTGC | + |
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Preference number: 3 (lower is better) Translates to: NSHSQGVLGPER*PHWRGLYNPFC Trigger: GCAGAATGGGTTGTAAAGACCTCTCCAATGTGGCCACCTTTCTGGCCCCAAGACACCCTGACTGTGGCTGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058464.5 |
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| 3UTR-3UTR CAA 90 bp | CCTAGGCGGCTTCCCAGGCAGTGTGTGTTCCTGTGTCACCCTCTCTCCATTTACCACATTTCAGGTTTATaGAATGCAGTGCTGGGAGCC | + |
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Preference number: 3 (lower is better) Translates to: PRRLPRQCVFLCHPLSIYHISGL*NAVLGA Trigger: GGCTCCCAGCACTGCATTCAATAAACCTGAAATGTG...GTAAATGGAGAGAGGGTGACACAGGAACACACACTGCCTGGGAAGCCGCCTAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058464.5 |
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| 3UTR-3UTR CAA 90 bp | AGCTCAGCTCTGCATCGTGAAGGCTGCTTAACACTGAAGAGCCCATGTTCTGCAAGAAAGGTGGCCACATaGGAGAGGTCTTTACAACCC | + |
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Preference number: 3 (lower is better) Translates to: SSALHREGCLTLKSPCSARKVAT*ERSLQP Trigger: GGGTTGTAAAGACCTCTCCAATGTGGCCACCTTTCT...TGCAGAACATGGGCTCTTCAGTGTTAAGCAGCCTTCACGATGCAGAGCTGAGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058464.5 |
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| 3UTR TCA 72 bp | TATGAATCCACCACATACCTACCGCAATGTCACCACTaGATGTCACCCAGCCACTCAGAAGTGGGCAATCCC | + |
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Preference number: 3 (lower is better) Translates to: YESTTYLPQCHH*MSPSHSEVGNP Trigger: GGGATTGCCCACTTCTGAGTGGCTGGGTGACATTCAGTGGTGACATTGCGGTAGGTATGTGGTGGATTCATA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058464.5 |
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| 3UTR GCA 72 bp | CTCCCTGGAACTCTTAGAATGGAGCCCTGCCTGACCTaGCACATTCCAGGAAAAGGCTTTATGGGAAAACAG | + |
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Preference number: 3 (lower is better) Translates to: LPGTLRMEPCLT*HIPGKGFMGKQ Trigger: CTGTTTTCCCATAAAGCCTTTTCCTGGAATGTGGCAGGTCAGGCAGGGCTCCATTCTAAGAGTTCCAGGGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058464.5 |
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| 3UTR GCA 72 bp | AGGGCCCAGGGGGCATTCAGTGTGGCTTTCAGGATATaGCAAGCTGTTGTCAATATAAACAGCCACAGTCAG | + |
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Preference number: 3 (lower is better) Translates to: RAQGAFSVAFRI*QAVVNINSHSQ Trigger: CTGACTGTGGCTGTTTATATTGACAACAGCTTGGCATATCCTGAAAGCCACACTGAATGCCCCCTGGGCCCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000058464.5 |
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| 3UTR TCA 72 bp | GCCACATTGGAGAGGTCTTTACAACCCATTCTGCACTaGCACTTGATATGTTCCTGCTTAAGAAACCCAGTG | + |
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Preference number: 3 (lower is better) Translates to: ATLERSLQPILH*HLICSCLRNPV Trigger: CACTGGGTTTCTTAAGCAGGAACATATCAAGTGTCAGTGCAGAATGGGTTGTAAAGACCTCTCCAATGTGGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058464.5 |
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| 3UTR-3UTR CAA 90 bp | GTTAGAATAATAGTTACTCGTCTTGTGGTCCTGGCCAATAAACAACCTGGAAAAGCAAGGAAGCGAGACTaGATGTCACCCTGCAATCGT | + |
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Preference number: 3 (lower is better) Translates to: VRIIVTRLVVLANKQPGKARKRD*MSPCNR Trigger: ACGATTGCAGGGTGACATCAAGTCTCGCTTCCTTGC...TTTTCCAGGTTGTTTATTGGCCAGGACCACAAGACGAGTAACTATTATTCTAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058464.5 |
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| 3UTR TCA 72 bp | TGTTCACTGAGATGCCTTTTGGAGATGATGTCATCCTaGTTTCTATTAGCTCTATCTTCCTTTAGAATACCT | + |
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Preference number: 3 (lower is better) Translates to: CSLRCLLEMMSS*FLLALSSFRIP Trigger: AGGTATTCTAAAGGAAGATAGAGCTAATAGAAATCAGGATGACATCATCTCCAAAAGGCATCTCAGTGAACA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058464.5 |
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| CDS-3UTR GCA 90 bp | CACGCCCATAACACACAATGCTCCAGTCGTAGGGCCTTCCCACTGCCCCTCCCAGCCTCATCTTGCCCTTaGCAGGGAGGACAAAGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: HAHNTQCSSRRAFPLPLPASSCP*QGGQRR Trigger: CCTTCTTTGTCCTCCCTGGCAAGGGCAAGATGAGGC...TGGGAGGGGCAGTGGGAAGGCCCTACGACTGGAGCATTGTGTGTTATGGGCGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058464.5 |
||
| CDS-3UTR CCA 90 bp | ATACATTCAAGCCTCCCAACCTGCACTTTGCTTGCTTCCCAGCAGAGGGCGCCGAGAATCTGGTGTTGCTaGGAGACACCTGGGAGGCCG | + |
|
Preference number: 4 (lower is better) Translates to: IHSSLPTCTLLASQQRAPRIWCC*ETPGRP Trigger: CGGCCTCCCAGGTGTCTCCCAGCAACACCAGATTCT...CGGCGCCCTCTGCTGGGAAGCAAGCAAAGTGCAGGTTGGGAGGCTTGAATGTAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058464.5 |
||
| CDS-3UTR CCA 90 bp | CCCTTGCCTGGCCTAGGCGGCTTCCCAGGCAGTGTGTGTTCCTGTGTCACCCTCTTGATCCATCTTTTCTaGAGTGAGCGGCTCCACTTC | + |
|
Preference number: 4 (lower is better) Translates to: PLPGLGGFPGSVCSCVTLLIHLF*SERLHF Trigger: GAAGTGGAGCCGCTCACTCCAGAAAAGATGGATCAA...GAGGGTGACACAGGAACACACACTGCCTGGGAAGCCGCCTAGGCCAGGCAAGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058464.5 |
||
| CDS-3UTR GCA 90 bp | CGTTGGACAAGTGACTCTGGAACTGTAGGAACAGCCCAGAGCCTGGTACTCTGGTCCAGAAACGTGGCCTaGAGCTGTAGCTCCTTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: RWTSDSGTVGTAQSLVLWSRNVA*SCSSFL Trigger: CAGGAAGGAGCTACAGCTGCAGGCCACGTTTCTGGA...CCAGAGTACCAGGCTCTGGGCTGTTCCTACAGTTCCAGAGTCACTTGTCCAACG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058464.5 |
||
| CDS-3UTR CCA 90 bp | CGTTGGACAAGTGACTCTGGAACTGTAGGAACAGCCCAGAGCCTGGTACTCTGGTTGCTGGGAGACACCTaGGAGGCCGGGTTTTTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: RWTSDSGTVGTAQSLVLWLLGDT*EAGFFF Trigger: GAAGAAAAACCCGGCCTCCCAGGTGTCTCCCAGCAA...CCAGAGTACCAGGCTCTGGGCTGTTCCTACAGTTCCAGAGTCACTTGTCCAACG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000058464.5 |
||
| CDS-3UTR CCA 90 bp | CGTTGGACAAGTGACTCTGGAACTGTAGGAACAGCCCAGAGCCTGGTACTCTGGTACTCGAAGCCCATGTaGATGGTGGGCTCCGAAACC | + |
|
Preference number: 4 (lower is better) Translates to: RWTSDSGTVGTAQSLVLWYSKPM*MVGSET Trigger: GGTTTCGGAGCCCACCATCCACATGGGCTTCGAGTA...CCAGAGTACCAGGCTCTGGGCTGTTCCTACAGTTCCAGAGTCACTTGTCCAACG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058464.5 |
||
| CDS-3UTR CCA 90 bp | TCACATACATTCAAGCCTCCCAACCTGCACTTTGCTTGCTTCCCAGCAGAGGGCCTGTTGATCTGGGCCTaGGCGGTGGCAGCATTTGAG | + |
|
Preference number: 4 (lower is better) Translates to: SHTFKPPNLHFACFPAEGLLIWA*AVAAFE Trigger: CTCAAATGCTGCCACCGCCCAGGCCCAGATCAACAG...GCCCTCTGCTGGGAAGCAAGCAAAGTGCAGGTTGGGAGGCTTGAATGTATGTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058464.5 |
||
| CDS-3UTR CCA 90 bp | CCCTTGCCTGGCCTAGGCGGCTTCCCAGGCAGTGTGTGTTCCTGTGTCACCCTCCTTGGTTGTAGGGATTaGATGACAACATGCAGAATA | + |
|
Preference number: 4 (lower is better) Translates to: PLPGLGGFPGSVCSCVTLLGCRD*MTTCRI Trigger: TATTCTGCATGTTGTCATCCAATCCCTACAACCAAG...GAGGGTGACACAGGAACACACACTGCCTGGGAAGCCGCCTAGGCCAGGCAAGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058464.5 |
||
| CDS-3UTR GCA 90 bp | CGTTGGACAAGTGACTCTGGAACTGTAGGAACAGCCCAGAGCCTGGTACTCTGGGAACATGTACAGTGGTaGCCTTGCTCAGGAGGAATG | + |
|
Preference number: 4 (lower is better) Translates to: RWTSDSGTVGTAQSLVLWEHVQW*PCSGGM Trigger: CATTCCTCCTGAGCAAGGGCACCACTGTACATGTTC...CCAGAGTACCAGGCTCTGGGCTGTTCCTACAGTTCCAGAGTCACTTGTCCAACG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058464.5 |
||
| CDS-3UTR CCA 90 bp | CCTAGGCGGCTTCCCAGGCAGTGTGTGTTCCTGTGTCACCCTCTCTCCATTTACCCACCACCTTCCCTTTaGTCTCCTTTTCCACATAAC | + |
|
Preference number: 4 (lower is better) Translates to: PRRLPRQCVFLCHPLSIYPPPSL*SPFPHN Trigger: GTTATGTGGAAAAGGAGACCAAAGGGAAGGTGGTGG...GTAAATGGAGAGAGGGTGACACAGGAACACACACTGCCTGGGAAGCCGCCTAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058464.5 |
||
| CDS-3UTR CCA 90 bp | TCACATACATTCAAGCCTCCCAACCTGCACTTTGCTTGCTTCCCAGCAGAGGGCGGTTCACCAGGACCATaGCTGTCTGAGAGTCAAGGT | + |
|
Preference number: 4 (lower is better) Translates to: SHTFKPPNLHFACFPAEGGSPGP*LSESQG Trigger: ACCTTGACTCTCAGACAGCCATGGTCCTGGTGAACC...GCCCTCTGCTGGGAAGCAAGCAAAGTGCAGGTTGGGAGGCTTGAATGTATGTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058464.5 |
||
| CDS-3UTR CCA 90 bp | CCAAGCTGTTGTCAATATAAACAGCCACAGTCAGGGTGTCTTGGGGCCAGAAAGCGCGGATTCCCATCTTaGGGAGGATGGTTTCCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: PSCCQYKQPQSGCLGARKRGFPS*GGWFPG Trigger: ACCTGGAAACCATCCTCCCCAAGATGGGAATCCGCG...CTTTCTGGCCCCAAGACACCCTGACTGTGGCTGTTTATATTGACAACAGCTTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058464.5 |
||
| CDS-3UTR TCA 90 bp | TTACCACTGAGTCCACATTTCAGGTTTATTGAATGCAGTGCTGGGAGCCAGCCACCCCGTAAAGCTTCTTaGCCCTGTCCAGAAACGTGG | + |
|
Preference number: 4 (lower is better) Translates to: LPLSPHFRFIECSAGSQPPRKAS*PCPETW Trigger: CCACGTTTCTGGACAGGGTCAAGAAGCTTTACGGGG...TGGCTGGCTCCCAGCACTGCATTCAATAAACCTGAAATGTGGACTCAGTGGTAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058464.5 |
||
| CDS-3UTR TCA 90 bp | TTACCACTGAGTCCACATTTCAGGTTTATTGAATGCAGTGCTGGGAGCCAGCCATCCAGCACAGCCTTGTaGGCAGCCTTAGAAACCTGC | + |
|
Preference number: 4 (lower is better) Translates to: LPLSPHFRFIECSAGSQPSSTAL*AALETC Trigger: GCAGGTTTCTAAGGCTGCTCACAAGGCTGTGCTGGA...TGGCTGGCTCCCAGCACTGCATTCAATAAACCTGAAATGTGGACTCAGTGGTAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058464.5 |
||
| CDS-3UTR GCA 90 bp | CCTAGGCGGCTTCCCAGGCAGTGTGTGTTCCTGTGTCACCCTCTCTCCATTTACGCTCTTGTTTGTGTTTaGAGTACTAAAAGGCTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: PRRLPRQCVFLCHPLSIYALVCV*STKRLG Trigger: ACCCAGCCTTTTAGTACTGCAAACACAAACAAGAGC...GTAAATGGAGAGAGGGTGACACAGGAACACACACTGCCTGGGAAGCCGCCTAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058464.5 |
||
| CDS-3UTR CCA 90 bp | CCAAGCTGTTGTCAATATAAACAGCCACAGTCAGGGTGTCTTGGGGCCAGAAAGGGAGGAAGGAGAATCTaGTGTTGCTGGGAGACACCT | + |
|
Preference number: 4 (lower is better) Translates to: PSCCQYKQPQSGCLGARKGGRRI*CCWETP Trigger: AGGTGTCTCCCAGCAACACCAGATTCTCCTTCCTCC...CTTTCTGGCCCCAAGACACCCTGACTGTGGCTGTTTATATTGACAACAGCTTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058464.5 |
||
| CDS-3UTR CCA 90 bp | AATGAGAGTATGAATCCACCACATACCTACCGCAATGTCACCACTGAATGTCACCGAAGCCCATGTGGATaGTGGGCTCCGAAACCCACG | + |
|
Preference number: 4 (lower is better) Translates to: NESMNPPHTYRNVTTECHRSPCG*WAPKPT Trigger: CGTGGGTTTCGGAGCCCACCATCCACATGGGCTTCG...GTGACATTCAGTGGTGACATTGCGGTAGGTATGTGGTGGATTCATACTCTCATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058464.5 |
||
| 3UTR CAA 72 bp | GCTGTTGTCAATATAAACAGCCACAGTCAGGGTGTCTaGGGGCCAGAAAGGTGGCCACATTGGAGAGGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: AVVNINSHSQGV*GPERWPHWRGL Trigger: AAGACCTCTCCAATGTGGCCACCTTTCTGGCCCCAAGACACCCTGACTGTGGCTGTTTATATTGACAACAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058464.5 |
||
| CDS-3UTR CCA 90 bp | AGCTCAGCTCTGCATCGTGAAGGCTGCTTAACACTGAAGAGCCCATGTTCTGCAACTTCCTTAGCCTCCTaGCAGACAGACTTTTCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: SSALHREGCLTLKSPCSATSLAS*QTDFSP Trigger: TGGAGAAAAGTCTGTCTGCCAGGAGGCTAAGGAAGT...TGCAGAACATGGGCTCTTCAGTGTTAAGCAGCCTTCACGATGCAGAGCTGAGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058464.5 |
||
| CDS-3UTR GCA 90 bp | TTACCACTGAGTCCACATTTCAGGTTTATTGAATGCAGTGCTGGGAGCCAGCCAAGACTTTTCTCCAGCTaGCTCATCTTGCCCTTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: LPLSPHFRFIECSAGSQPRLFSS*LILPLP Trigger: TGGCAAGGGCAAGATGAGGCAGCTGGAGAAAAGTCT...TGGCTGGCTCCCAGCACTGCATTCAATAAACCTGAAATGTGGACTCAGTGGTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058464.5 |
||
| CDS-3UTR TCA 90 bp | AAAAAGAACCTGAGCTTTGCTAAAGGTTGCAGGGGACATGCCAGTGCTGTGAAAGGCGGTGGCAGCATTTaGGAAGTCTTCAGAAAAGAC | + |
|
Preference number: 4 (lower is better) Translates to: KKNLSFAKGCRGHASAVKGGGSI*EVFRKD Trigger: GTCTTTTCTGAAGACTTCTCAAATGCTGCCACCGCC...TTTCACAGCACTGGCATGTCCCCTGCAACCTTTAGCAAAGCTCAGGTTCTTTTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000058464.5 |
||
| CDS-3UTR CCA 90 bp | CTTACCCTAATTTGTTACAACCTCTTTGTGCACATTTCCTCGATATTGAATGTGGGATCTGTGTCTTGGTaGCTGAGCGGGCCCCTAGGG | + |
|
Preference number: 4 (lower is better) Translates to: LTLICYNLFVHISSILNVGSVSW*LSGPLG Trigger: CCCTAGGGGCCCGCTCAGCCACCAAGACACAGATCC...CACATTCAATATCGAGGAAATGTGCACAAAGAGGTTGTAACAAATTAGGGTAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058464.5 |
||
| CDS-3UTR CCA 90 bp | CCTAGGCGGCTTCCCAGGCAGTGTGTGTTCCTGTGTCACCCTCTCTCCATTTACAGAGATGGAAAATTTTaGAATGAACACCTTGATCCA | + |
|
Preference number: 4 (lower is better) Translates to: PRRLPRQCVFLCHPLSIYRDGKF*NEHLDP Trigger: TGGATCAAGGTGTTCATTCCAAAATTTTCCATCTCT...GTAAATGGAGAGAGGGTGACACAGGAACACACACTGCCTGGGAAGCCGCCTAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058464.5 |
||
| CDS-3UTR GCA 90 bp | TTACCACTGAGTCCACATTTCAGGTTTATTGAATGCAGTGCTGGGAGCCAGCCAGATTGGATGACAACATaGAGAATATTGGAGCACAGA | + |
|
Preference number: 4 (lower is better) Translates to: LPLSPHFRFIECSAGSQPDWMTT*RILEHR Trigger: TCTGTGCTCCAATATTCTGCATGTTGTCATCCAATC...TGGCTGGCTCCCAGCACTGCATTCAATAAACCTGAAATGTGGACTCAGTGGTAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058464.5 |
||
| CDS-3UTR GCA 90 bp | CTTACCCTAATTTGTTACAACCTCTTTGTGCACATTTCCTCGATATTGAATGTGAGGAGAATCTGGTGTTaGTGGGAGACACCTGGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: LTLICYNLFVHISSILNVRRIWC*WETPGR Trigger: CCTCCCAGGTGTCTCCCAGCAACACCAGATTCTCCT...CACATTCAATATCGAGGAAATGTGCACAAAGAGGTTGTAACAAATTAGGGTAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058464.5 |
||
| CDS-3UTR CCA 90 bp | CTTACCCTAATTTGTTACAACCTCTTTGTGCACATTTCCTCGATATTGAATGTGGCAAACGACTCGGTCTaGTGCATCATGGGAACATGT | + |
|
Preference number: 4 (lower is better) Translates to: LTLICYNLFVHISSILNVANDSV*CIMGTC Trigger: ACATGTTCCCATGATGCACCAGACCGAGTCGTTTGC...CACATTCAATATCGAGGAAATGTGCACAAAGAGGTTGTAACAAATTAGGGTAAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058464.5 |
||
| CDS-3UTR CAA 90 bp | CGTTGGACAAGTGACTCTGGAACTGTAGGAACAGCCCAGAGCCTGGTACTCTGGCGGAGGATCTGTGTCTaGGTGGCTGAGCGGGCCCCT | + |
|
Preference number: 5 (lower is better) Translates to: RWTSDSGTVGTAQSLVLWRRICV*VAERAP Trigger: AGGGGCCCGCTCAGCCACCAAGACACAGATCCTCCG...CCAGAGTACCAGGCTCTGGGCTGTTCCTACAGTTCCAGAGTCACTTGTCCAACG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058464.5 |
||
| CDS-3UTR CAA 90 bp | CCCTTGCCTGGCCTAGGCGGCTTCCCAGGCAGTGTGTGTTCCTGTGTCACCCTCGGGCGGTGGCAGCATTaGAGAAGTCTTCAGAAAAGA | + |
|
Preference number: 5 (lower is better) Translates to: PLPGLGGFPGSVCSCVTLGRWQH*RSLQKR Trigger: TCTTTTCTGAAGACTTCTCAAATGCTGCCACCGCCC...GAGGGTGACACAGGAACACACACTGCCTGGGAAGCCGCCTAGGCCAGGCAAGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058464.5 |
||
| CDS CCA 90 bp | TTCCTGATGAAGAGGACGCTGCCCATCCGCAATTCCCGGCCTTGGTaGCACTTGTTTAGTGAGCGGACGAGGTACTCGAAGCCCATGTGG | + |
|
Preference number: 5 (lower is better) Translates to: FLMKRTLPIRNSRPW*HLFSERTRYSKPMW Trigger: CCACATGGGCTTCGAGTACCTCGTCCGCTCACTAAACAAGTGCCACCAAGGCCGGGAATTGCGGATGGGCAGCGTCCTCTTCATCAGGAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058464.5 ENSMUST00000164023.2 |
||
| CDS CCA 90 bp | TCCTTCCTGATGAAGAGGACGCTGCCCATCCGCAATTCCCGGCCTTaGTGGCACTTGTTTAGTGAGCGGACGAGGTACTCGAAGCCCATG | + |
|
Preference number: 5 (lower is better) Translates to: SFLMKRTLPIRNSRP*WHLFSERTRYSKPM Trigger: CATGGGCTTCGAGTACCTCGTCCGCTCACTAAACAAGTGCCACCAAGGCCGGGAATTGCGGATGGGCAGCGTCCTCTTCATCAGGAAGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058464.5 ENSMUST00000164023.2 |
||
| CDS-3UTR CAA 90 bp | TCACATACATTCAAGCCTCCCAACCTGCACTTTGCTTGCTTCCCAGCAGAGGGCTCCAGCTGCCTCATCTaGCCCTTGCCAGGGAGGACA | + |
|
Preference number: 5 (lower is better) Translates to: SHTFKPPNLHFACFPAEGSSCLI*PLPGRT Trigger: TGTCCTCCCTGGCAAGGGCAAGATGAGGCAGCTGGA...GCCCTCTGCTGGGAAGCAAGCAAAGTGCAGGTTGGGAGGCTTGAATGTATGTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058464.5 |
||
| CDS-3UTR CAA 90 bp | CCCTTGCCTGGCCTAGGCGGCTTCCCAGGCAGTGTGTGTTCCTGTGTCACCCTCATCAGGAAGGGTTCCTaGAAGGCAATGATAGAAGAC | + |
|
Preference number: 5 (lower is better) Translates to: PLPGLGGFPGSVCSCVTLIRKGS*KAMIED Trigger: GTCTTCTATCATTGCCTTCAAGGAACCCTTCCTGAT...GAGGGTGACACAGGAACACACACTGCCTGGGAAGCCGCCTAGGCCAGGCAAGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058464.5 |
||
| CDS TCA 90 bp | CAGGAAGGGTTCCTTGAAGGCAATGATAGAAGACGGGGTGTCCCTTaGGCGGACTATAAGTTTGGTGGTGGTGGCTGCCGCGGCTTCTGT | + |
|
Preference number: 5 (lower is better) Translates to: QEGFLEGNDRRRGVP*ADYKFGGGGCRGFC Trigger: ACAGAAGCCGCGGCAGCCACCACCACCAAACTTATAGTCCGCTCAAGGGACACCCCGTCTTCTATCATTGCCTTCAAGGAACCCTTCCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058464.5 |
||
| CDS-3UTR CAA 90 bp | TCACATACATTCAAGCCTCCCAACCTGCACTTTGCTTGCTTCCCAGCAGAGGGCGAGCAGCCTAGCTCCTaGTCCACTCCAAAAGCAAAC | + |
|
Preference number: 5 (lower is better) Translates to: SHTFKPPNLHFACFPAEGEQPSS*STPKAN Trigger: GTTTGCTTTTGGAGTGGACAAGGAGCTAGGCTGCTC...GCCCTCTGCTGGGAAGCAAGCAAAGTGCAGGTTGGGAGGCTTGAATGTATGTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058464.5 |
||
| CDS-3UTR CAA 90 bp | AGCTCAGCTCTGCATCGTGAAGGCTGCTTAACACTGAAGAGCCCATGTTCTGCATGCCTCATCTTGCCCTaGCCAGGGAGGACAAAGAAG | + |
|
Preference number: 5 (lower is better) Translates to: SSALHREGCLTLKSPCSACLILP*PGRTKK Trigger: CTTCTTTGTCCTCCCTGGCAAGGGCAAGATGAGGCA...TGCAGAACATGGGCTCTTCAGTGTTAAGCAGCCTTCACGATGCAGAGCTGAGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058464.5 |
||
| CDS-3UTR CAA 90 bp | AGCTCAGCTCTGCATCGTGAAGGCTGCTTAACACTGAAGAGCCCATGTTCTGCAAAAGGCTGGGTCCAGTaGGCTTTAAAGAAGATGTGG | + |
|
Preference number: 5 (lower is better) Translates to: SSALHREGCLTLKSPCSAKGWVQ*ALKKMW Trigger: CCACATCTTCTTTAAAGCCAACTGGACCCAGCCTTT...TGCAGAACATGGGCTCTTCAGTGTTAAGCAGCCTTCACGATGCAGAGCTGAGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058464.5 |
||
| CDS-3UTR CAA 90 bp | AATGAGAGTATGAATCCACCACATACCTACCGCAATGTCACCACTGAATGTCACTCGCGGATTCCCATCTaGGGGAGGATGGTTTCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: NESMNPPHTYRNVTTECHSRIPI*GRMVSR Trigger: CCTGGAAACCATCCTCCCCAAGATGGGAATCCGCGA...GTGACATTCAGTGGTGACATTGCGGTAGGTATGTGGTGGATTCATACTCTCATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058464.5 |
||
| CDS TCA 90 bp | TTACATCCACCACCTTCCCTTTGGTCTCCTTTTCCACATAACTGTTaGTCTGGGCCTGGGCGGTGGCAGCATTTGAGAAGTCTTCAGAAA | + |
|
Preference number: 5 (lower is better) Translates to: LHPPPSLWSPFPHNC*SGPGRWQHLRSLQK Trigger: TTTCTGAAGACTTCTCAAATGCTGCCACCGCCCAGGCCCAGATCAACAGTTATGTGGAAAAGGAGACCAAAGGGAAGGTGGTGGATGTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058464.5 ENSMUST00000164023.2 |
||
| CDS TCA 90 bp | AACCTGCAGGAAGTGTGTCTTTGTAATTCCGGAGAAGTCAGCGTTTaGGTTAAAGGCATCGCGGATTCCCATCTTGGGGAGGATGGTTTC | + |
|
Preference number: 5 (lower is better) Translates to: NLQEVCLCNSGEVSV*VKGIADSHLGEDGF Trigger: GAAACCATCCTCCCCAAGATGGGAATCCGCGATGCCTTTAACTCAAACGCTGACTTCTCCGGAATTACAAAGACACACTTCCTGCAGGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058464.5 |
||
| CDS-3UTR CAA 90 bp | AGCTCAGCTCTGCATCGTGAAGGCTGCTTAACACTGAAGAGCCCATGTTCTGCAAGGAATGGGAAGCTCTaGTTTGTGTTTGCAGTACTA | + |
|
Preference number: 5 (lower is better) Translates to: SSALHREGCLTLKSPCSARNGKL*FVFAVL Trigger: TAGTACTGCAAACACAAACAAGAGCTTCCCATTCCT...TGCAGAACATGGGCTCTTCAGTGTTAAGCAGCCTTCACGATGCAGAGCTGAGCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058464.5 |
||
| CDS-3UTR CAA 90 bp | AAAAAGAACCTGAGCTTTGCTAAAGGTTGCAGGGGACATGCCAGTGCTGTGAAAACAACATGCAGAATATaGGAGCACAGAAGCCAACCA | + |
|
Preference number: 5 (lower is better) Translates to: KKNLSFAKGCRGHASAVKTTCRI*EHRSQP Trigger: TGGTTGGCTTCTGTGCTCCAATATTCTGCATGTTGT...TTTCACAGCACTGGCATGTCCCCTGCAACCTTTAGCAAAGCTCAGGTTCTTTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000058464.5 |
||
| CDS-3UTR CAA 90 bp | AATGAGAGTATGAATCCACCACATACCTACCGCAATGTCACCACTGAATGTCACTTTGGAATGAACACCTaGATCCATCTTTTCTGGAGT | + |
|
Preference number: 5 (lower is better) Translates to: NESMNPPHTYRNVTTECHFGMNT*IHLFWS Trigger: ACTCCAGAAAAGATGGATCAAGGTGTTCATTCCAAA...GTGACATTCAGTGGTGACATTGCGGTAGGTATGTGGTGGATTCATACTCTCATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058464.5 |
||
| CDS CAA 72 bp | GTGAAGTTGAAGCCAAGAGTCCGGAGGATCTGTGTCTaGGTGGCTGAGCGGGCCCCTAGGGACAGCATGGCC | + |
|
Preference number: 6 (lower is better) Translates to: VKLKPRVRRICV*VAERAPRDSMA Trigger: GGCCATGCTGTCCCTAGGGGCCCGCTCAGCCACCAAGACACAGATCCTCCGGACTCTTGGCTTCAACTTCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058464.5 ENSMUST00000164023.2 |
||
| CDS CCA 72 bp | CCTGAGCCAGCCTCTGGTACAGGAGGAAGGAGAATCTaGTGTTGCTGGGAGACACCTGGGAGGCCGGGTTTT | + |
|
Preference number: 6 (lower is better) Translates to: PEPASGTGGRRI*CCWETPGRPGF Trigger: AAAACCCGGCCTCCCAGGTGTCTCCCAGCAACACCAGATTCTCCTTCCTCCTGTACCAGAGGCTGGCTCAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058464.5 ENSMUST00000164023.2 |
||
| CDS CAA 72 bp | ATAGAAGACGGGGTGTCCCTTGAGCGGACTATAAGTTaGGTGGTGGTGGCTGCCGCGGCTTCTGTCCCCTCC | + |
|
Preference number: 6 (lower is better) Translates to: IEDGVSLERTIS*VVVAAAASVPS Trigger: GGAGGGGACAGAAGCCGCGGCAGCCACCACCACCAAACTTATAGTCCGCTCAAGGGACACCCCGTCTTCTAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058464.5 |
||
| CDS GCA 72 bp | CCAGCCTCTGGTACAGGAGGAAGGAGAATCTGGTGTTaGTGGGAGACACCTGGGAGGCCGGGTTTTTCTTCA | + |
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Preference number: 6 (lower is better) Translates to: PASGTGGRRIWC*WETPGRPGFSS Trigger: TGAAGAAAAACCCGGCCTCCCAGGTGTCTCCCAGCAACACCAGATTCTCCTTCCTCCTGTACCAGAGGCTGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000058464.5 ENSMUST00000164023.2 |
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| CDS TCA 72 bp | CCACCTTCCCTTTGGTCTCCTTTTCCACATAACTGTTaGTCTGGGCCTGGGCGGTGGCAGCATTTGAGAAGT | + |
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Preference number: 6 (lower is better) Translates to: PPSLWSPFPHNC*SGPGRWQHLRS Trigger: ACTTCTCAAATGCTGCCACCGCCCAGGCCCAGATCAACAGTTATGTGGAAAAGGAGACCAAAGGGAAGGTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058464.5 ENSMUST00000164023.2 |
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| CDS GCA 72 bp | TCCTTGTCCACTCCAAAAGCAAACGACTCGGTCTGGTaGATCATGGGAACATGTACAGTGGTGCCCTTGCTC | + |
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Preference number: 6 (lower is better) Translates to: SLSTPKANDSVW*IMGTCTVVPLL Trigger: GAGCAAGGGCACCACTGTACATGTTCCCATGATGCACCAGACCGAGTCGTTTGCTTTTGGAGTGGACAAGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058464.5 |
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| CDS CAA 72 bp | ACAGTGGTGCCCTTGCTCAGGAGGAATGGGAAGCTCTaGTTTGTGTTTGCAGTACTAAAAGGCTGGGTCCAG | + |
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Preference number: 6 (lower is better) Translates to: TVVPLLRRNGKL*FVFAVLKGWVQ Trigger: CTGGACCCAGCCTTTTAGTACTGCAAACACAAACAAGAGCTTCCCATTCCTCCTGAGCAAGGGCACCACTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058464.5 |
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| CDS CCA 72 bp | AGAGATACTCACAGGAGAAAAGAGGATATTCTGACCTaGGTTTTCCTGAGCCAGCCTCTGGTACAGGAGGAA | + |
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Preference number: 6 (lower is better) Translates to: RDTHRRKEDILT*VFLSQPLVQEE Trigger: TTCCTCCTGTACCAGAGGCTGGCTCAGGAAAACCCAGGTCAGAATATCCTCTTTTCTCCTGTGAGTATCTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000058464.5 ENSMUST00000164023.2 |
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| CDS CCA 72 bp | GGGAACATGTACAGTGGTGCCCTTGCTCAGGAGGAATaGGAAGCTCTTGTTTGTGTTTGCAGTACTAAAAGG | + |
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Preference number: 6 (lower is better) Translates to: GNMYSGALAQEE*EALVCVCSTKR Trigger: CCTTTTAGTACTGCAAACACAAACAAGAGCTTCCCATTCCTCCTGAGCAAGGGCACCACTGTACATGTTCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058464.5 |
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| CDS CCA 72 bp | GGGAAGCTCTTGTTTGTGTTTGCAGTACTAAAAGGCTaGGTCCAGTTGGCTTTAAAGAAGATGTGGTTCACC | + |
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Preference number: 6 (lower is better) Translates to: GKLLFVFAVLKG*VQLALKKMWFT Trigger: GGTGAACCACATCTTCTTTAAAGCCAACTGGACCCAGCCTTTTAGTACTGCAAACACAAACAAGAGCTTCCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058464.5 |
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| CDS CAA 72 bp | CTTGGTTGTAGGGATTGGATGACAACATGCAGAATATaGGAGCACAGAAGCCAACCAATAGGAGAACTCGGT | + |
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Preference number: 6 (lower is better) Translates to: LGCRDWMTTCRI*EHRSQPIGELG Trigger: ACCGAGTTCTCCTATTGGTTGGCTTCTGTGCTCCAATATTCTGCATGTTGTCATCCAATCCCTACAACCAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058464.5 ENSMUST00000164023.2 |
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| CDS CAA 90 bp | ACAGATTCTGTGTTTTTATCTAGAAGTAGAATCAGGAAGGGTTCCTaGAAGGCAATGATAGAAGACGGGGTGTCCCTTGAGCGGACTATA | + |
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Preference number: 6 (lower is better) Translates to: TDSVFLSRSRIRKGS*KAMIEDGVSLERTI Trigger: TATAGTCCGCTCAAGGGACACCCCGTCTTCTATCATTGCCTTCAAGGAACCCTTCCTGATTCTACTTCTAGATAAAAACACAGAATCTGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000058464.5 |
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