Pregenerated sensors for SERPINA7 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000031271Ensembl transcript IDs: ENSMUST00000033626.15, ENSMUST00000060824.4, ENSMUST00000152457.2
Found 73 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TCTTCTACAGCCAATGGACTTCTGAGGAGGTCCACTTTTATCACTTaGACAAATGAAATAAAGTCCAAGTCCATAGCAAGTACATTAAGT | + |
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Preference number: 1 (lower is better) Translates to: SSTANGLLRRSTFIT*TNEIKSKSIASTLS Trigger: ACTTAATGTACTTGCTATGGACTTGGACTTTATTTCATTTGTGCAAGTGATAAAAGTGGACCTCCTCAGAAGTCCATTGGCTGTAGAAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033626.15 ENSMUST00000060824.4 |
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| 3UTR TCA 90 bp | AGCCAATGGACTTCTGAGGAGGTCCACTTTTATCACTTGCACAAATaGAATAAAGTCCAAGTCCATAGCAAGTACATTAAGTTATGCTAT | + |
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Preference number: 1 (lower is better) Translates to: SQWTSEEVHFYHLHK*NKVQVHSKYIKLCY Trigger: ATAGCATAACTTAATGTACTTGCTATGGACTTGGACTTTATTTCATTTGTGCAAGTGATAAAAGTGGACCTCCTCAGAAGTCCATTGGCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033626.15 ENSMUST00000060824.4 |
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| 3UTR-3UTR TCA 90 bp | AAAATTCTACACTTAGCTAACTCATGGCCAGCTTTACAAAGACCTACCAACATCCAGCCAATGGACTTCTaGGGAGGTCCACTTTTATCA | + |
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Preference number: 2 (lower is better) Translates to: KILHLANSWPALQRPTNIQPMDF*GGPLLS Trigger: TGATAAAAGTGGACCTCCTCAGAAGTCCATTGGCTG...GATGTTGGTAGGTCTTTGTAAAGCTGGCCATGAGTTAGCTAAGTGTAGAATTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033626.15 ENSMUST00000060824.4 |
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| 3UTR CAA 90 bp | CTACCAACATCGATCCTTTTTGTAGTTTTGGATAACAATCACTCATaGACTATCTGCATGTTTGGTCACAGGATTAGCTTCTTCTACAGC | + |
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Preference number: 2 (lower is better) Translates to: LPTSILFVVLDNNHS*TICMFGHRISFFYS Trigger: GCTGTAGAAGAAGCTAATCCTGTGACCAAACATGCAGATAGTCAATGAGTGATTGTTATCCAAAACTACAAAAAGGATCGATGTTGGTAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033626.15 ENSMUST00000060824.4 |
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| 3UTR-3UTR TCA 90 bp | TCACAGGTAGAAAGAGCAGAGGTTATTTTGAAGGTGATATATACAAGCCACCTCATAACAATCACTCATTaGCTATCTGCATGTTTGGTC | + |
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Preference number: 2 (lower is better) Translates to: SQVERAEVILKVIYTSHLITITH*LSACLV Trigger: GACCAAACATGCAGATAGTCAATGAGTGATTGTTAT...GAGGTGGCTTGTATATATCACCTTCAAAATAACCTCTGCTCTTTCTACCTGTGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033626.15 ENSMUST00000060824.4 |
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| 3UTR-3UTR TCA 90 bp | AAATTTGAGATTAAATCTACTTCGGTAGGTGAAGATAGTATGGCATACCTAGGCAGCTGCAACACTAGTTaGAAGTACTCAGTTTATGAC | + |
|
Preference number: 2 (lower is better) Translates to: KFEIKSTSVGEDSMAYLGSCNTS*KYSVYD Trigger: GTCATAAACTGAGTACTTTCAACTAGTGTTGCAGCT...GCCTAGGTATGCCATACTATCTTCACCTACCGAAGTAGATTTAATCTCAAATTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033626.15 ENSMUST00000060824.4 |
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| 3UTR-3UTR GCA 90 bp | TCACAGGTAGAAAGAGCAGAGGTTATTTTGAAGGTGATATATACAAGCCACCTCAGACTTGACCTGTATTaGAACTATTGTCCAAAAGAT | + |
|
Preference number: 2 (lower is better) Translates to: SQVERAEVILKVIYTSHLRLDLY*NYCPKD Trigger: ATCTTTTGGACAATAGTTGCAATACAGGTCAAGTCT...GAGGTGGCTTGTATATATCACCTTCAAAATAACCTCTGCTCTTTCTACCTGTGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033626.15 ENSMUST00000060824.4 |
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| 3UTR-3UTR CCA 90 bp | AAATTTGAGATTAAATCTACTTCGGTAGGTGAAGATAGTATGGCATACCTAGGCTATGAATTAGCACAATaGCATCTGCTAGTGATGATG | + |
|
Preference number: 2 (lower is better) Translates to: KFEIKSTSVGEDSMAYLGYELAQ*HLLVMM Trigger: CATCATCACTAGCAGATGCCATTGTGCTAATTCATA...GCCTAGGTATGCCATACTATCTTCACCTACCGAAGTAGATTTAATCTCAAATTT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033626.15 ENSMUST00000060824.4 |
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| 3UTR-3UTR GCA 90 bp | CCAAAATCACAGGTAGAAAGAGCAGAGGTTATTTTGAAGGTGATATATACAAGCAGACTTGACCTGTATTaGAACTATTGTCCAAAAGAT | + |
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Preference number: 2 (lower is better) Translates to: PKSQVERAEVILKVIYTSRLDLY*NYCPKD Trigger: ATCTTTTGGACAATAGTTGCAATACAGGTCAAGTCT...GCTTGTATATATCACCTTCAAAATAACCTCTGCTCTTTCTACCTGTGATTTTGG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000033626.15 ENSMUST00000060824.4 |
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| 3UTR CCA 72 bp | GTCCCTCTTTCATCAATAGCTTATGAATTAGCACAATaGCATCTGCTAGTGATGATGTGGGCTTGTGTGAAG | + |
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Preference number: 3 (lower is better) Translates to: VPLSSIAYELAQ*HLLVMMWACVK Trigger: CTTCACACAAGCCCACATCATCACTAGCAGATGCCATTGTGCTAATTCATAAGCTATTGATGAAAGAGGGAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033626.15 ENSMUST00000060824.4 |
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| 3UTR GCA 72 bp | GCCAATGGACTTCTGAGGAGGTCCACTTTTATCACTTaGACAAATGAAATAAAGTCCAAGTCCATAGCAAGT | + |
|
Preference number: 3 (lower is better) Translates to: ANGLLRRSTFIT*TNEIKSKSIAS Trigger: ACTTGCTATGGACTTGGACTTTATTTCATTTGTGCAAGTGATAAAAGTGGACCTCCTCAGAAGTCCATTGGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033626.15 ENSMUST00000060824.4 |
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| 3UTR CCA 72 bp | TATGAATTAGCACAATGGCATCTGCTAGTGATGATGTaGGCTTGTGTGAAGAATTTATTTCACCCTGGTTTG | + |
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Preference number: 3 (lower is better) Translates to: YELAQWHLLVMM*ACVKNLFHPGL Trigger: CAAACCAGGGTGAAATAAATTCTTCACACAAGCCCACATCATCACTAGCAGATGCCATTGTGCTAATTCATA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033626.15 ENSMUST00000060824.4 |
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| 3UTR CCA 72 bp | GATGATGTGGGCTTGTGTGAAGAATTTATTTCACCCTaGTTTGTTGTTGAATACATGTTAGGTCACAAAAGC | + |
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Preference number: 3 (lower is better) Translates to: DDVGLCEEFISP*FVVEYMLGHKS Trigger: GCTTTTGTGACCTAACATGTATTCAACAACAAACCAGGGTGAAATAAATTCTTCACACAAGCCCACATCATC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033626.15 ENSMUST00000060824.4 |
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| 3UTR-3UTR CAA 90 bp | AAAATTCTACACTTAGCTAACTCATGGCCAGCTTTACAAAGACCTACCAACATCGATAACAATCACTCATaGACTATCTGCATGTTTGGT | + |
|
Preference number: 3 (lower is better) Translates to: KILHLANSWPALQRPTNIDNNHS*TICMFG Trigger: ACCAAACATGCAGATAGTCAATGAGTGATTGTTATC...GATGTTGGTAGGTCTTTGTAAAGCTGGCCATGAGTTAGCTAAGTGTAGAATTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033626.15 ENSMUST00000060824.4 |
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| 3UTR TCA 72 bp | ACTTCTGAGGAGGTCCACTTTTATCACTTGCACAAATaGAATAAAGTCCAAGTCCATAGCAAGTACATTAAG | + |
|
Preference number: 3 (lower is better) Translates to: TSEEVHFYHLHK*NKVQVHSKYIK Trigger: CTTAATGTACTTGCTATGGACTTGGACTTTATTTCATTTGTGCAAGTGATAAAAGTGGACCTCCTCAGAAGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033626.15 ENSMUST00000060824.4 |
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| 3UTR GCA 72 bp | TTTGTAGTTTTGGATAACAATCACTCATTGACTATCTaGATGTTTGGTCACAGGATTAGCTTCTTCTACAGC | + |
|
Preference number: 3 (lower is better) Translates to: FVVLDNNHSLTI*MFGHRISFFYS Trigger: GCTGTAGAAGAAGCTAATCCTGTGACCAAACATGCAGATAGTCAATGAGTGATTGTTATCCAAAACTACAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033626.15 ENSMUST00000060824.4 |
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| 3UTR-3UTR CAA 90 bp | CCAAAATCACAGGTAGAAAGAGCAGAGGTTATTTTGAAGGTGATATATACAAGCGATAACAATCACTCATaGACTATCTGCATGTTTGGT | + |
|
Preference number: 3 (lower is better) Translates to: PKSQVERAEVILKVIYTSDNNHS*TICMFG Trigger: ACCAAACATGCAGATAGTCAATGAGTGATTGTTATC...GCTTGTATATATCACCTTCAAAATAACCTCTGCTCTTTCTACCTGTGATTTTGG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033626.15 ENSMUST00000060824.4 |
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| 3UTR-3UTR CAA 90 bp | CCAAAATCACAGGTAGAAAGAGCAGAGGTTATTTTGAAGGTGATATATACAAGCCCTGTATTGCAACTATaGTCCAAAAGATACATCCAA | + |
|
Preference number: 3 (lower is better) Translates to: PKSQVERAEVILKVIYTSPVLQL*SKRYIQ Trigger: TTGGATGTATCTTTTGGACAATAGTTGCAATACAGG...GCTTGTATATATCACCTTCAAAATAACCTCTGCTCTTTCTACCTGTGATTTTGG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000033626.15 ENSMUST00000060824.4 |
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| 3UTR-3UTR CAA 90 bp | GCAATAGCCAAAATCACAGGTAGAAAGAGCAGAGGTTATTTTGAAGGTGATATACCTGTATTGCAACTATaGTCCAAAAGATACATCCAA | + |
|
Preference number: 3 (lower is better) Translates to: AIAKITGRKSRGYFEGDIPVLQL*SKRYIQ Trigger: TTGGATGTATCTTTTGGACAATAGTTGCAATACAGG...TATATCACCTTCAAAATAACCTCTGCTCTTTCTACCTGTGATTTTGGCTATTGC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000033626.15 ENSMUST00000060824.4 |
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| 3UTR TCA 72 bp | GGTGATATATACAAGCCACCTCATTTGTGTGTTCATTaGTCATACTATTGGAATAGTGTAATGCAAAGACTT | + |
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Preference number: 3 (lower is better) Translates to: GDIYKPPHLCVH*SYYWNSVMQRL Trigger: AAGTCTTTGCATTACACTATTCCAATAGTATGATCAATGAACACACAAATGAGGTGGCTTGTATATATCACC 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033626.15 ENSMUST00000060824.4 |
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| CDS-3UTR GCA 90 bp | AGCTTCTTCTACAGCCAATGGACTTCTGAGGAGGTCCACTTTTATCACTTGCACGATCTTGTGCTGGGCTaGAGAAACATTGGAGAAGTC | + |
|
Preference number: 4 (lower is better) Translates to: SFFYSQWTSEEVHFYHLHDLVLG*RNIGEV Trigger: GACTTCTCCAATGTTTCTGCAGCCCAGCACAAGATC...GTGCAAGTGATAAAAGTGGACCTCCTCAGAAGTCCATTGGCTGTAGAAGAAGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033626.15 |
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| CDS-3UTR CCA 90 bp | AGCTTCTTCTACAGCCAATGGACTTCTGAGGAGGTCCACTTTTATCACTTGCACTCCAGAATCTGTGTTTaGGTGCTAGAGCCAGATCCA | + |
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Preference number: 4 (lower is better) Translates to: SFFYSQWTSEEVHFYHLHSRICV*VLEPDP Trigger: TGGATCTGGCTCTAGCACCCAAACACAGATTCTGGA...GTGCAAGTGATAAAAGTGGACCTCCTCAGAAGTCCATTGGCTGTAGAAGAAGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033626.15 |
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| CDS-3UTR TCA 90 bp | CACTCATTGACTATCTGCATGTTTGGTCACAGGATTAGCTTCTTCTACAGCCAATTTTGTTGGGGCAAATaGCAGGTCGTTACTTTGCCT | + |
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Preference number: 4 (lower is better) Translates to: HSLTICMFGHRISFFYSQFCWGK*QVVTLP Trigger: AGGCAAAGTAACGACCTGTCATTTGCCCCAACAAAA...TTGGCTGTAGAAGAAGCTAATCCTGTGACCAAACATGCAGATAGTCAATGAGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033626.15 |
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| CDS-3UTR GCA 90 bp | CACTCATTGACTATCTGCATGTTTGGTCACAGGATTAGCTTCTTCTACAGCCAACCATCTTCTGAAGTGTaGTTCCAAGGTCATATGTGG | + |
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Preference number: 4 (lower is better) Translates to: HSLTICMFGHRISFFYSQPSSEV*FQGHMW Trigger: CCACATATGACCTTGGAAGCACACTTCAGAAGATGG...TTGGCTGTAGAAGAAGCTAATCCTGTGACCAAACATGCAGATAGTCAATGAGTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033626.15 ENSMUST00000060824.4 |
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| CDS-3UTR CCA 90 bp | AGCTTCTTCTACAGCCAATGGACTTCTGAGGAGGTCCACTTTTATCACTTGCACCAAAAACTTTGCCAATaGTTTCAGCTGCTGTCCAAT | + |
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Preference number: 4 (lower is better) Translates to: SFFYSQWTSEEVHFYHLHQKLCQ*FQLLSN Trigger: ATTGGACAGCAGCTGAAACCATTGGCAAAGTTTTTG...GTGCAAGTGATAAAAGTGGACCTCCTCAGAAGTCCATTGGCTGTAGAAGAAGCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033626.15 |
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| CDS-3UTR TCA 90 bp | AGCTTCTTCTACAGCCAATGGACTTCTGAGGAGGTCCACTTTTATCACTTGCACTTCAGTTTGAGGCCTTaGATTAAGCCTACAATTTTC | + |
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Preference number: 4 (lower is better) Translates to: SFFYSQWTSEEVHFYHLHFSLRP*IKPTIF Trigger: GAAAATTGTAGGCTTAATTCAAGGCCTCAAACTGAA...GTGCAAGTGATAAAAGTGGACCTCCTCAGAAGTCCATTGGCTGTAGAAGAAGCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033626.15 ENSMUST00000060824.4 |
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| CDS-3UTR TCA 90 bp | GCAATAGCCAAAATCACAGGTAGAAAGAGCAGAGGTTATTTTGAAGGTGATATAGGTGCTCTTGTCCACTaGGAAGTTGGAACTCTCTTC | + |
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Preference number: 4 (lower is better) Translates to: AIAKITGRKSRGYFEGDIGALVH*EVGTLF Trigger: GAAGAGAGTTCCAACTTCTCAGTGGACAAGAGCACC...TATATCACCTTCAAAATAACCTCTGCTCTTTCTACCTGTGATTTTGGCTATTGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033626.15 ENSMUST00000060824.4 |
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| CDS-3UTR TCA 90 bp | AAAATTCTACACTTAGCTAACTCATGGCCAGCTTTACAAAGACCTACCAACATCCTTCAGTGTCTTAGATaGCATGGCTGCTTCTACCCA | + |
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Preference number: 4 (lower is better) Translates to: KILHLANSWPALQRPTNILQCLR*HGCFYP Trigger: TGGGTAGAAGCAGCCATGTCATCTAAGACACTGAAG...GATGTTGGTAGGTCTTTGTAAAGCTGGCCATGAGTTAGCTAAGTGTAGAATTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033626.15 ENSMUST00000060824.4 |
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| CDS-3UTR TCA 90 bp | CCAAAATCACAGGTAGAAAGAGCAGAGGTTATTTTGAAGGTGATATATACAAGCCTTCAGTGTCTTAGATaGCATGGCTGCTTCTACCCA | + |
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Preference number: 4 (lower is better) Translates to: PKSQVERAEVILKVIYTSLQCLR*HGCFYP Trigger: TGGGTAGAAGCAGCCATGTCATCTAAGACACTGAAG...GCTTGTATATATCACCTTCAAAATAACCTCTGCTCTTTCTACCTGTGATTTTGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033626.15 ENSMUST00000060824.4 |
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| CDS-3UTR TCA 90 bp | CCAAAATCACAGGTAGAAAGAGCAGAGGTTATTTTGAAGGTGATATATACAAGCCTCACTAAAGACCAGTaGCATGTAGCACATGCCCAA | + |
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Preference number: 4 (lower is better) Translates to: PKSQVERAEVILKVIYTSLTKDQ*HVAHAQ Trigger: TTGGGCATGTGCTACATGTCACTGGTCTTTAGTGAG...GCTTGTATATATCACCTTCAAAATAACCTCTGCTCTTTCTACCTGTGATTTTGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060824.4 |
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| CDS-3UTR GCA 90 bp | TCACAGGTAGAAAGAGCAGAGGTTATTTTGAAGGTGATATATACAAGCCACCTCTATTGTTCTAGCTGGTaGATCATGGGCACTTGTACT | + |
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Preference number: 4 (lower is better) Translates to: SQVERAEVILKVIYTSHLYCSSW*IMGTCT Trigger: AGTACAAGTGCCCATGATGCACCAGCTAGAACAATA...GAGGTGGCTTGTATATATCACCTTCAAAATAACCTCTGCTCTTTCTACCTGTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033626.15 ENSMUST00000060824.4 |
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| CDS-3UTR CCA 90 bp | AAATTTGAGATTAAATCTACTTCGGTAGGTGAAGATAGTATGGCATACCTAGGCCTGTTGATCTTGTGCTaGGCTGCAGAAACATTGGAG | + |
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Preference number: 4 (lower is better) Translates to: KFEIKSTSVGEDSMAYLGLLILC*AAETLE Trigger: CTCCAATGTTTCTGCAGCCCAGCACAAGATCAACAG...GCCTAGGTATGCCATACTATCTTCACCTACCGAAGTAGATTTAATCTCAAATTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033626.15 |
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| CDS-3UTR TCA 90 bp | CCAAAATCACAGGTAGAAAGAGCAGAGGTTATTTTGAAGGTGATATATACAAGCCAATGGATTGTAGCCTaGAGCCCAAATACCAAGACA | + |
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Preference number: 4 (lower is better) Translates to: PKSQVERAEVILKVIYTSQWIVA*SPNTKT Trigger: TGTCTTGGTATTTGGGCTTCAGGCTACAATCCATTG...GCTTGTATATATCACCTTCAAAATAACCTCTGCTCTTTCTACCTGTGATTTTGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033626.15 |
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| CDS-3UTR TCA 90 bp | CCAAAATCACAGGTAGAAAGAGCAGAGGTTATTTTGAAGGTGATATATACAAGCTCAGCTGCTGTCCAATaGAAACTGCATTTCCCATCT | + |
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Preference number: 4 (lower is better) Translates to: PKSQVERAEVILKVIYTSSAAVQ*KLHFPS Trigger: AGATGGGAAATGCAGTTTTCATTGGACAGCAGCTGA...GCTTGTATATATCACCTTCAAAATAACCTCTGCTCTTTCTACCTGTGATTTTGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033626.15 |
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| CDS-3UTR TCA 90 bp | CCAAAATCACAGGTAGAAAGAGCAGAGGTTATTTTGAAGGTGATATATACAAGCTTGCCCACTGGGCTCTaGAATGAATATAGTTCACCA | + |
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Preference number: 4 (lower is better) Translates to: PKSQVERAEVILKVIYTSLPTGL*NEYSSP Trigger: TGGTGAACTATATTCATTTCAGAGCCCAGTGGGCAA...GCTTGTATATATCACCTTCAAAATAACCTCTGCTCTTTCTACCTGTGATTTTGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033626.15 ENSMUST00000060824.4 |
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| CDS-3UTR TCA 90 bp | GCAATAGCCAAAATCACAGGTAGAAAGAGCAGAGGTTATTTTGAAGGTGATATATTGCCCACTGGGCTCTaGAATGAATATAGTTCACCA | + |
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Preference number: 4 (lower is better) Translates to: AIAKITGRKSRGYFEGDILPTGL*NEYSSP Trigger: TGGTGAACTATATTCATTTCAGAGCCCAGTGGGCAA...TATATCACCTTCAAAATAACCTCTGCTCTTTCTACCTGTGATTTTGGCTATTGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033626.15 ENSMUST00000060824.4 |
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| CDS-3UTR GCA 90 bp | AAATTTGAGATTAAATCTACTTCGGTAGGTGAAGATAGTATGGCATACCTAGGCAGAGCTGTTATGTGGTaGACAATGGATTGTAGCCTG | + |
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Preference number: 4 (lower is better) Translates to: KFEIKSTSVGEDSMAYLGRAVMW*TMDCSL Trigger: CAGGCTACAATCCATTGTGCACCACATAACAGCTCT...GCCTAGGTATGCCATACTATCTTCACCTACCGAAGTAGATTTAATCTCAAATTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033626.15 |
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| CDS-3UTR GCA 90 bp | TCACAGGTAGAAAGAGCAGAGGTTATTTTGAAGGTGATATATACAAGCCACCTCCCGATACAGACTGAATaGAAAGTCAGCATTGATAGA | + |
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Preference number: 4 (lower is better) Translates to: SQVERAEVILKVIYTSHLPIQTE*KVSIDR Trigger: TCTATCAATGCTGACTTTGCATTCAGTCTGTATCGG...GAGGTGGCTTGTATATATCACCTTCAAAATAACCTCTGCTCTTTCTACCTGTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033626.15 |
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| CDS-3UTR CCA 90 bp | AAATTTGAGATTAAATCTACTTCGGTAGGTGAAGATAGTATGGCATACCTAGGCCATGTGTCCCTCTTTTaGAAGGACAAAAAGTGCCAG | + |
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Preference number: 4 (lower is better) Translates to: KFEIKSTSVGEDSMAYLGHVSLF*KDKKCQ Trigger: CTGGCACTTTTTGTCCTTCCAAAAGAGGGACACATG...GCCTAGGTATGCCATACTATCTTCACCTACCGAAGTAGATTTAATCTCAAATTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033626.15 ENSMUST00000060824.4 |
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| 3UTR CAA 72 bp | ATTAGCACAATGGCATCTGCTAGTGATGATGTGGGCTaGTGTGAAGAATTTATTTCACCCTGGTTTGTTGTT | + |
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Preference number: 4 (lower is better) Translates to: ISTMASASDDVG*CEEFISPWFVV Trigger: AACAACAAACCAGGGTGAAATAAATTCTTCACACAAGCCCACATCATCACTAGCAGATGCCATTGTGCTAAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033626.15 ENSMUST00000060824.4 |
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| CDS-3UTR GCA 90 bp | CCAAAATCACAGGTAGAAAGAGCAGAGGTTATTTTGAAGGTGATATATACAAGCCTAAAGCAACAGATATaGTCACAGGGGAGAAGAAGA | + |
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Preference number: 4 (lower is better) Translates to: PKSQVERAEVILKVIYTSLKQQI*SQGRRR Trigger: TCTTCTTCTCCCCTGTGAGCATATCTGTTGCTTTAG...GCTTGTATATATCACCTTCAAAATAACCTCTGCTCTTTCTACCTGTGATTTTGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000033626.15 |
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| CDS-3UTR GCA 90 bp | AAATTTGAGATTAAATCTACTTCGGTAGGTGAAGATAGTATGGCATACCTAGGCTATTGTTCTAGCTGGTaGATCATGGGCACTTGTACT | + |
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Preference number: 4 (lower is better) Translates to: KFEIKSTSVGEDSMAYLGYCSSW*IMGTCT Trigger: AGTACAAGTGCCCATGATGCACCAGCTAGAACAATA...GCCTAGGTATGCCATACTATCTTCACCTACCGAAGTAGATTTAATCTCAAATTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033626.15 ENSMUST00000060824.4 |
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| CDS-3UTR GCA 90 bp | CCAAAATCACAGGTAGAAAGAGCAGAGGTTATTTTGAAGGTGATATATACAAGCCTGTCCAATGAAAACTaGATTTCCCATCTGCAATTC | + |
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Preference number: 4 (lower is better) Translates to: PKSQVERAEVILKVIYTSLSNEN*ISHLQF Trigger: GAATTGCAGATGGGAAATGCAGTTTTCATTGGACAG...GCTTGTATATATCACCTTCAAAATAACCTCTGCTCTTTCTACCTGTGATTTTGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000033626.15 |
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| CDS-3UTR CCA 90 bp | AAAATTCTACACTTAGCTAACTCATGGCCAGCTTTACAAAGACCTACCAACATCATCCAAAAGAAAGCATaGCTAAAGCAACAGATATGC | + |
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Preference number: 4 (lower is better) Translates to: KILHLANSWPALQRPTNIIQKKA*LKQQIC Trigger: GCATATCTGTTGCTTTAGCCATGCTTTCTTTTGGAT...GATGTTGGTAGGTCTTTGTAAAGCTGGCCATGAGTTAGCTAAGTGTAGAATTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033626.15 |
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| CDS-3UTR CCA 90 bp | AAAATTCTACACTTAGCTAACTCATGGCCAGCTTTACAAAGACCTACCAACATCGAACAGATCAAATGTTaGAAGCCCTGTTGTAATTCT | + |
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Preference number: 4 (lower is better) Translates to: KILHLANSWPALQRPTNIEQIKC*KPCCNS Trigger: AGAATTACAACAGGGCTTCCAACATTTGATCTGTTC...GATGTTGGTAGGTCTTTGTAAAGCTGGCCATGAGTTAGCTAAGTGTAGAATTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033626.15 |
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| 3UTR CAA 72 bp | TCGATCCTTTTTGTAGTTTTGGATAACAATCACTCATaGACTATCTGCATGTTTGGTCACAGGATTAGCTTC | + |
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Preference number: 4 (lower is better) Translates to: SILFVVLDNNHS*TICMFGHRISF Trigger: GAAGCTAATCCTGTGACCAAACATGCAGATAGTCAATGAGTGATTGTTATCCAAAACTACAAAAAGGATCGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033626.15 ENSMUST00000060824.4 |
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| CDS-3UTR TCA 90 bp | AAATTTGAGATTAAATCTACTTCGGTAGGTGAAGATAGTATGGCATACCTAGGCTTCAGTTTGAGGCCTTaGATTAAGCCTACAATTTTC | + |
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Preference number: 4 (lower is better) Translates to: KFEIKSTSVGEDSMAYLGFSLRP*IKPTIF Trigger: GAAAATTGTAGGCTTAATTCAAGGCCTCAAACTGAA...GCCTAGGTATGCCATACTATCTTCACCTACCGAAGTAGATTTAATCTCAAATTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033626.15 ENSMUST00000060824.4 |
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| CDS-3UTR GCA 90 bp | AAATTTGAGATTAAATCTACTTCGGTAGGTGAAGATAGTATGGCATACCTAGGCACTGCATTTCCCATCTaGAATTCCAGTTCATTCTTT | + |
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Preference number: 4 (lower is better) Translates to: KFEIKSTSVGEDSMAYLGTAFPI*NSSSFF Trigger: AAAGAATGAACTGGAATTGCAGATGGGAAATGCAGT...GCCTAGGTATGCCATACTATCTTCACCTACCGAAGTAGATTTAATCTCAAATTT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033626.15 |
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| CDS-3UTR CCA 90 bp | GCAATAGCCAAAATCACAGGTAGAAAGAGCAGAGGTTATTTTGAAGGTGATATAAGAACACTGACATTCTaGAATGAAGATGATAGCACA | + |
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Preference number: 4 (lower is better) Translates to: AIAKITGRKSRGYFEGDIRTLTF*NEDDST Trigger: TGTGCTATCATCTTCATTCCAGAATGTCAGTGTTCT...TATATCACCTTCAAAATAACCTCTGCTCTTTCTACCTGTGATTTTGGCTATTGC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033626.15 |
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| CDS CCA 90 bp | GCTCCATATCCACGTAATGATAGTATTGTTCTAGCTGGTGCATCATaGGCACTTGTACTGTGGTGCTCTTGTCCACTGAGAAGTTGGAAC | + |
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Preference number: 5 (lower is better) Translates to: APYPRNDSIVLAGAS*ALVLWCSCPLRSWN Trigger: GTTCCAACTTCTCAGTGGACAAGAGCACCACAGTACAAGTGCCCATGATGCACCAGCTAGAACAATACTATCATTACGTGGATATGGAGC 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033626.15 ENSMUST00000060824.4 |
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| CDS-3UTR CAA 90 bp | AAAATTCTACACTTAGCTAACTCATGGCCAGCTTTACAAAGACCTACCAACATCCTCCAGAATCTGTGTTaGGGTGCTAGAGCCAGATCC | + |
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Preference number: 5 (lower is better) Translates to: KILHLANSWPALQRPTNILQNLC*GARARS Trigger: GGATCTGGCTCTAGCACCCAAACACAGATTCTGGAG...GATGTTGGTAGGTCTTTGTAAAGCTGGCCATGAGTTAGCTAAGTGTAGAATTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033626.15 |
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| CDS TCA 90 bp | GGAAAGTCAGCACTTTCAGCAAAGGCATCCCTCATACCCATCTTCTaGAGTGTGCTTCCAAGGTCATATGTGGCAGAAATAGAAAACTTT | + |
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Preference number: 5 (lower is better) Translates to: GKSALSAKASLIPIF*SVLPRSYVAEIENF Trigger: AAAGTTTTCTATTTCTGCCACATATGACCTTGGAAGCACACTTCAGAAGATGGGTATGAGGGATGCCTTTGCTGAAAGTGCTGACTTTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033626.15 ENSMUST00000060824.4 |
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| CDS-3UTR CAA 90 bp | CACTCATTGACTATCTGCATGTTTGGTCACAGGATTAGCTTCTTCTACAGCCAATTGTCCACTGAGAAGTaGGAACTCTCTTCAGTTTTA | + |
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Preference number: 5 (lower is better) Translates to: HSLTICMFGHRISFFYSQLSTEK*ELSSVL Trigger: TAAAACTGAAGAGAGTTCCAACTTCTCAGTGGACAA...TTGGCTGTAGAAGAAGCTAATCCTGTGACCAAACATGCAGATAGTCAATGAGTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033626.15 ENSMUST00000060824.4 |
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| CDS-3UTR CAA 90 bp | AAATTTGAGATTAAATCTACTTCGGTAGGTGAAGATAGTATGGCATACCTAGGCCCATGTGTCCCTCTTTaGGAAGGACAAAAAGTGCCA | + |
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Preference number: 5 (lower is better) Translates to: KFEIKSTSVGEDSMAYLGPCVPL*EGQKVP Trigger: TGGCACTTTTTGTCCTTCCAAAAGAGGGACACATGG...GCCTAGGTATGCCATACTATCTTCACCTACCGAAGTAGATTTAATCTCAAATTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033626.15 ENSMUST00000060824.4 |
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| CDS GCA 90 bp | ATCCAAAAACTTTGCCAATGGTTTCAGCTGCTGTCCAATGAAAACTaGATTTCCCATCTGCAATTCCAGTTCATTCTTTGGGAAATTCAA | + |
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Preference number: 5 (lower is better) Translates to: IQKLCQWFQLLSNEN*ISHLQFQFILWEIQ Trigger: TTGAATTTCCCAAAGAATGAACTGGAATTGCAGATGGGAAATGCAGTTTTCATTGGACAGCAGCTGAAACCATTGGCAAAGTTTTTGGAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033626.15 |
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| CDS-3UTR CAA 90 bp | CCAAAATCACAGGTAGAAAGAGCAGAGGTTATTTTGAAGGTGATATATACAAGCCATCATCCAAAAACTTaGCCAATGGTTTCAGCTGCT | + |
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Preference number: 5 (lower is better) Translates to: PKSQVERAEVILKVIYTSHHPKT*PMVSAA Trigger: AGCAGCTGAAACCATTGGCAAAGTTTTTGGATGATG...GCTTGTATATATCACCTTCAAAATAACCTCTGCTCTTTCTACCTGTGATTTTGG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000033626.15 |
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| CDS-3UTR CAA 90 bp | AAAATTCTACACTTAGCTAACTCATGGCCAGCTTTACAAAGACCTACCAACATCTTGTCCACTGAGAAGTaGGAACTCTCTTCAGTTTTA | + |
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Preference number: 5 (lower is better) Translates to: KILHLANSWPALQRPTNILSTEK*ELSSVL Trigger: TAAAACTGAAGAGAGTTCCAACTTCTCAGTGGACAA...GATGTTGGTAGGTCTTTGTAAAGCTGGCCATGAGTTAGCTAAGTGTAGAATTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033626.15 ENSMUST00000060824.4 |
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| CDS-3UTR CAA 90 bp | TCACAGGTAGAAAGAGCAGAGGTTATTTTGAAGGTGATATATACAAGCCACCTCGATCTTGTGCTGGGCTaGATTTATAAAACTAAAGCA | + |
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Preference number: 5 (lower is better) Translates to: SQVERAEVILKVIYTSHLDLVLG*IYKTKA Trigger: TGCTTTAGTTTTATAAATCAAGCCCAGCACAAGATC...GAGGTGGCTTGTATATATCACCTTCAAAATAACCTCTGCTCTTTCTACCTGTGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060824.4 |
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| CDS GCA 72 bp | GTTCTAGCTGGTGCATCATGGGCACTTGTACTGTGGTaGTCTTGTCCACTGAGAAGTTGGAACTCTCTTCAG | + |
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Preference number: 6 (lower is better) Translates to: VLAGASWALVLW*SCPLRSWNSLQ Trigger: CTGAAGAGAGTTCCAACTTCTCAGTGGACAAGAGCACCACAGTACAAGTGCCCATGATGCACCAGCTAGAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033626.15 ENSMUST00000060824.4 |
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| CDS CCA 72 bp | GTGAGGTTAAACCCCAACACCTCCAGAATCTGTGTTTaGGTGCTAGAGCCAGATCCAAAAGAAAGCATGGCT | + |
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Preference number: 6 (lower is better) Translates to: VRLNPNTSRICV*VLEPDPKESMA Trigger: AGCCATGCTTTCTTTTGGATCTGGCTCTAGCACCCAAACACAGATTCTGGAGGTGTTGGGGTTTAACCTCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033626.15 |
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| CDS CCA 72 bp | CATGGCTGCTTCTACCCATTCCATGTGTCCCTCTTTTaGAAGGACAAAAAGTGCCAGGGCGTTCTCACTATA | + |
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Preference number: 6 (lower is better) Translates to: HGCFYPFHVSLF*KDKKCQGVLTI Trigger: TATAGTGAGAACGCCCTGGCACTTTTTGTCCTTCCAAAAGAGGGACACATGGAATGGGTAGAAGCAGCCATG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033626.15 ENSMUST00000060824.4 |
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| CDS CAA 72 bp | TGTGAGGTTAAACCCCAACACCTCCAGAATCTGTGTTaGGGTGCTAGAGCCAGATCCAAAAGAAAGCATGGC | + |
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Preference number: 6 (lower is better) Translates to: CEVKPQHLQNLC*GARARSKRKHG Trigger: GCCATGCTTTCTTTTGGATCTGGCTCTAGCACCCAAACACAGATTCTGGAGGTGTTGGGGTTTAACCTCACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033626.15 |
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| CDS CAA 72 bp | ACATGGCTGCTTCTACCCATTCCATGTGTCCCTCTTTaGGAAGGACAAAAAGTGCCAGGGCGTTCTCACTAT | + |
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Preference number: 6 (lower is better) Translates to: TWLLLPIPCVPL*EGQKVPGRSHY Trigger: ATAGTGAGAACGCCCTGGCACTTTTTGTCCTTCCAAAAGAGGGACACATGGAATGGGTAGAAGCAGCCATGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033626.15 ENSMUST00000060824.4 |
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| CDS CAA 90 bp | TGCATCATGGGCACTTGTACTGTGGTGCTCTTGTCCACTGAGAAGTaGGAACTCTCTTCAGTTTTAGATACACGGAAAGGATTTGCCCAC | + |
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Preference number: 6 (lower is better) Translates to: CIMGTCTVVLLSTEK*ELSSVLDTRKGFAH Trigger: GTGGGCAAATCCTTTCCGTGTATCTAAAACTGAAGAGAGTTCCAACTTCTCAGTGGACAAGAGCACCACAGTACAAGTGCCCATGATGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033626.15 ENSMUST00000060824.4 |
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| CDS CAA 90 bp | TATTGTTCTAGCTGGTGCATCATGGGCACTTGTACTGTGGTGCTCTaGTCCACTGAGAAGTTGGAACTCTCTTCAGTTTTAGATACACGG | + |
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Preference number: 6 (lower is better) Translates to: YCSSWCIMGTCTVVL*STEKLELSSVLDTR Trigger: CCGTGTATCTAAAACTGAAGAGAGTTCCAACTTCTCAGTGGACAAGAGCACCACAGTACAAGTGCCCATGATGCACCAGCTAGAACAATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033626.15 ENSMUST00000060824.4 |
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| CDS TCA 72 bp | CATCATGGGCACTTGTACTGTGGTGCTCTTGTCCACTaGGAAGTTGGAACTCTCTTCAGTTTTAGATACACG | + |
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Preference number: 6 (lower is better) Translates to: HHGHLYCGALVH*EVGTLFSFRYT Trigger: CGTGTATCTAAAACTGAAGAGAGTTCCAACTTCTCAGTGGACAAGAGCACCACAGTACAAGTGCCCATGATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033626.15 ENSMUST00000060824.4 |
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| CDS TCA 72 bp | GCACTTTCAGCAAAGGCATCCCTCATACCCATCTTCTaGAGTGTGCTTCCAAGGTCATATGTGGCAGAAATA | + |
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Preference number: 6 (lower is better) Translates to: ALSAKASLIPIF*SVLPRSYVAEI Trigger: TATTTCTGCCACATATGACCTTGGAAGCACACTTCAGAAGATGGGTATGAGGGATGCCTTTGCTGAAAGTGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033626.15 ENSMUST00000060824.4 |
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| CDS GCA 72 bp | TGGCATTTTGTTGGGGCAAATGACAGGTCGTTACTTTaGCTTCAGAGCTGTTATGTGGTGCACAATGGATTG | + |
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Preference number: 6 (lower is better) Translates to: WHFVGANDRSLL*LQSCYVVHNGL Trigger: CAATCCATTGTGCACCACATAACAGCTCTGAAGGCAAAGTAACGACCTGTCATTTGCCCCAACAAAATGCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033626.15 ENSMUST00000152457.2 |
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| CDS CAA 72 bp | GGCACTTGTACTGTGGTGCTCTTGTCCACTGAGAAGTaGGAACTCTCTTCAGTTTTAGATACACGGAAAGGA | + |
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Preference number: 6 (lower is better) Translates to: GTCTVVLLSTEK*ELSSVLDTRKG Trigger: TCCTTTCCGTGTATCTAAAACTGAAGAGAGTTCCAACTTCTCAGTGGACAAGAGCACCACAGTACAAGTGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033626.15 ENSMUST00000060824.4 |
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| CDS GCA 72 bp | GGAACTCTCTTCAGTTTTAGATACACGGAAAGGATTTaGCCACTGGGCTCTGAAATGAATATAGTTCACCAG | + |
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Preference number: 6 (lower is better) Translates to: GTLFSFRYTERI*PLGSEMNIVHQ Trigger: CTGGTGAACTATATTCATTTCAGAGCCCAGTGGGCAAATCCTTTCCGTGTATCTAAAACTGAAGAGAGTTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033626.15 ENSMUST00000060824.4 |
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| CDS CAA 72 bp | GACAAAAAGTGCCAGGGCGTTCTCACTATAGTCCATTaGAAGTACTGTACAATTCAGCTCCATATCCACGTA | + |
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Preference number: 6 (lower is better) Translates to: DKKCQGVLTIVH*KYCTIQLHIHV Trigger: TACGTGGATATGGAGCTGAATTGTACAGTACTTCAAATGGACTATAGTGAGAACGCCCTGGCACTTTTTGTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033626.15 ENSMUST00000060824.4 |
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| CDS TCA 72 bp | CCAAAAACTTTGCCAATGGTTTCAGCTGCTGTCCAATaGAAACTGCATTTCCCATCTGCAATTCCAGTTCAT | + |
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Preference number: 6 (lower is better) Translates to: PKTLPMVSAAVQ*KLHFPSAIPVH Trigger: ATGAACTGGAATTGCAGATGGGAAATGCAGTTTTCATTGGACAGCAGCTGAAACCATTGGCAAAGTTTTTGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033626.15 |
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| CDS CAA 90 bp | TTTTGGAAGGACAAAAAGTGCCAGGGCGTTCTCACTATAGTCCATTaGAAGTACTGTACAATTCAGCTCCATATCCACGTAATGATAGTA | + |
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Preference number: 6 (lower is better) Translates to: FWKDKKCQGVLTIVH*KYCTIQLHIHVMIV Trigger: TACTATCATTACGTGGATATGGAGCTGAATTGTACAGTACTTCAAATGGACTATAGTGAGAACGCCCTGGCACTTTTTGTCCTTCCAAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033626.15 ENSMUST00000060824.4 |
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