Pregenerated sensors for SERPINA5 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000041550Ensembl transcript IDs: ENSMUST00000021495.4
Found 80 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GTGTCCTTTCTCAACCCTGATGAACTGAGAGTTGGTGCTGATAGGTaGGGGACCAGGTTTATGACTGTGCTTCCTGGTGACCTTTATATA | + |
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Preference number: 1 (lower is better) Translates to: VSFLNPDELRVGADR*GTRFMTVLPGDLYI Trigger: TATATAAAGGTCACCAGGAAGCACAGTCATAAACCTGGTCCCCCACCTATCAGCACCAACTCTCAGTTCATCAGGGTTGAGAAAGGACAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021495.4 |
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| 3UTR CCA 90 bp | GAATCTCACAGGTTGCTGAATGGGCTTCTAGTTCTGTTCCTTCACTaGACACACAAAGAAACACAGGCCCAGAGAGGGACATTTCCATTC | + |
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Preference number: 1 (lower is better) Translates to: ESHRLLNGLLVLFLH*THKETQAQRGTFPF Trigger: GAATGGAAATGTCCCTCTCTGGGCCTGTGTTTCTTTGTGTGTCCAGTGAAGGAACAGAACTAGAAGCCCATTCAGCAACCTGTGAGATTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021495.4 |
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| 3UTR CCA 90 bp | CATAGAGAAGCCAACCCCTGTGTAAGAATCTCACAGGTTGCTGAATaGGCTTCTAGTTCTGTTCCTTCACTGGACACACAAAGAAACACA | + |
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Preference number: 1 (lower is better) Translates to: HREANPCVRISQVAE*ASSSVPSLDTQRNT Trigger: TGTGTTTCTTTGTGTGTCCAGTGAAGGAACAGAACTAGAAGCCCATTCAGCAACCTGTGAGATTCTTACACAGGGGTTGGCTTCTCTATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021495.4 |
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| 3UTR TCA 90 bp | TTATATATGCGGACCAGTCTTTTACAGAACTTTGTAGAGCTAGACTaGGCAGGAGAGGCCTGGAGTCTGGACACAACTATGTCACATATA | + |
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Preference number: 1 (lower is better) Translates to: LYMRTSLLQNFVELD*AGEAWSLDTTMSHI Trigger: TATATGTGACATAGTTGTGTCCAGACTCCAGGCCTCTCCTGCTCAGTCTAGCTCTACAAAGTTCTGTAAAAGACTGGTCCGCATATATAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021495.4 |
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| 3UTR TCA 90 bp | TTAGGGTCAGTGTCAATGATGAAGGATGAGAGCAAGAACACATCTTaGAACTGTGATCAAGGAAGCAGCCATAGGGATATTGATCTTATC | + |
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Preference number: 1 (lower is better) Translates to: LGSVSMMKDESKNTS*NCDQGSSHRDIDLI Trigger: GATAAGATCAATATCCCTATGGCTGCTTCCTTGATCACAGTTTCAAGATGTGTTCTTGCTCTCATCCTTCATCATTGACACTGACCCTAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021495.4 |
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| 3UTR-3UTR CCA 90 bp | CTGAGAGTTGGTGCTGATAGGTGGGGGACCAGGTTTATGACTGTGCTTCCTGGTCAACCAAGAGATGGATaGGCTGAAGAACATGCCTGG | + |
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Preference number: 2 (lower is better) Translates to: LRVGADRWGTRFMTVLPGQPRDG*AEEHAW Trigger: CCAGGCATGTTCTTCAGCCCATCCATCTCTTGGTTG...ACCAGGAAGCACAGTCATAAACCTGGTCCCCCACCTATCAGCACCAACTCTCAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021495.4 |
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| 3UTR-3UTR TCA 90 bp | TTCCCATGTTACAGAGCTACCAGTGGCATTTCAGAAGCTCAATCCAGTGTCCTTAAGAGATGGATGGGCTaGAGAACATGCCTGGCTCCC | + |
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Preference number: 2 (lower is better) Translates to: FPCYRATSGISEAQSSVLKRWMG*RTCLAP Trigger: GGGAGCCAGGCATGTTCTTCAGCCCATCCATCTCTT...AAGGACACTGGATTGAGCTTCTGAAATGCCACTGGTAGCTCTGTAACATGGGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021495.4 |
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| 3UTR CAA 90 bp | ACCACAGACCTCTATCACACCACCTCAGCCAGCCAGGCTTGTGATTaGATACCTTTGTTTGTGGTGAGACACTTTGACCCTGATTACTCA | + |
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Preference number: 2 (lower is better) Translates to: TTDLYHTTSASQACD*IPLFVVRHFDPDYS Trigger: TGAGTAATCAGGGTCAAAGTGTCTCACCACAAACAAAGGTATCAAATCACAAGCCTGGCTGGCTGAGGTGGTGTGATAGAGGTCTGTGGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021495.4 |
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| 3UTR-3UTR TCA 90 bp | AGACTGAGCAGGAGAGGCCTGGAGTCTGGACACAACTATGTCACATATAAGATGAGCAAGAACACATCTTaGAACTGTGATCAAGGAAGC | + |
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Preference number: 2 (lower is better) Translates to: RLSRRGLESGHNYVTYKMSKNTS*NCDQGS Trigger: GCTTCCTTGATCACAGTTTCAAGATGTGTTCTTGCT...CATCTTATATGTGACATAGTTGTGTCCAGACTCCAGGCCTCTCCTGCTCAGTCT 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021495.4 |
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| 3UTR-3UTR TCA 90 bp | GAGGGACATTTCCATTCCCATGTTACAGAGCTACCAGTGGCATTTCAGAAGCTCGTCAATGATGAAGGATaGGAGCAAGAACACATCTTG | + |
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Preference number: 2 (lower is better) Translates to: EGHFHSHVTELPVAFQKLVNDEG*EQEHIL Trigger: CAAGATGTGTTCTTGCTCTCATCCTTCATCATTGAC...GAGCTTCTGAAATGCCACTGGTAGCTCTGTAACATGGGAATGGAAATGTCCCTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021495.4 |
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| 3UTR-3UTR TCA 90 bp | GTAAGAATCTCACAGGTTGCTGAATGGGCTTCTAGTTCTGTTCCTTCACTGGACAGTCAATCTACTCTATaGAAATCACTAGCAACCAAG | + |
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Preference number: 2 (lower is better) Translates to: VRISQVAEWASSSVPSLDSQSTL*KSLATK Trigger: CTTGGTTGCTAGTGATTTTCATAGAGTAGATTGACT...GTCCAGTGAAGGAACAGAACTAGAAGCCCATTCAGCAACCTGTGAGATTCTTAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021495.4 |
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| 3UTR CCA 72 bp | CTCAACCCTGATGAACTGAGAGTTGGTGCTGATAGGTaGGGGACCAGGTTTATGACTGTGCTTCCTGGTGAC | + |
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Preference number: 3 (lower is better) Translates to: LNPDELRVGADR*GTRFMTVLPGD Trigger: GTCACCAGGAAGCACAGTCATAAACCTGGTCCCCCACCTATCAGCACCAACTCTCAGTTCATCAGGGTTGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021495.4 |
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| 3UTR CCA 72 bp | GCCAACCCCTGTGTAAGAATCTCACAGGTTGCTGAATaGGCTTCTAGTTCTGTTCCTTCACTGGACACACAA | + |
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Preference number: 3 (lower is better) Translates to: ANPCVRISQVAE*ASSSVPSLDTQ Trigger: TTGTGTGTCCAGTGAAGGAACAGAACTAGAAGCCCATTCAGCAACCTGTGAGATTCTTACACAGGGGTTGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021495.4 |
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| 3UTR CCA 72 bp | AGGGACATTTCCATTCCCATGTTACAGAGCTACCAGTaGCATTTCAGAAGCTCAATCCAGTGTCCTTTCTCA | + |
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Preference number: 3 (lower is better) Translates to: RDISIPMLQSYQ*HFRSSIQCPFS Trigger: TGAGAAAGGACACTGGATTGAGCTTCTGAAATGCCACTGGTAGCTCTGTAACATGGGAATGGAAATGTCCCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021495.4 |
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| 3UTR TCA 72 bp | CACTTTGACCCTGATTACTCAAGTATGCTACTAACCTaGGTTCTTACAGCACCCCTGGCTAACATAGAGAAG | + |
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Preference number: 3 (lower is better) Translates to: HFDPDYSSMLLT*VLTAPLANIEK Trigger: CTTCTCTATGTTAGCCAGGGGTGCTGTAAGAACTCAGGTTAGTAGCATACTTGAGTAATCAGGGTCAAAGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021495.4 |
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| 3UTR CCA 72 bp | GGACACAACTATGTCACATATAAGATGGTAGGACCTTaGAGAAATCTAGTGACCTCTTTAGGGTCAGTGTCA | + |
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Preference number: 3 (lower is better) Translates to: GHNYVTYKMVGP*RNLVTSLGSVS Trigger: TGACACTGACCCTAAAGAGGTCACTAGATTTCTCCAAGGTCCTACCATCTTATATGTGACATAGTTGTGTCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021495.4 |
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| 3UTR TCA 72 bp | GTGTCAATGATGAAGGATGAGAGCAAGAACACATCTTaGAACTGTGATCAAGGAAGCAGCCATAGGGATATT | + |
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Preference number: 3 (lower is better) Translates to: VSMMKDESKNTS*NCDQGSSHRDI Trigger: AATATCCCTATGGCTGCTTCCTTGATCACAGTTTCAAGATGTGTTCTTGCTCTCATCCTTCATCATTGACAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021495.4 |
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| CDS-3UTR GCA 90 bp | CTGAGAGTTGGTGCTGATAGGTGGGGGACCAGGTTTATGACTGTGCTTCCTGGTCTGCCCAGGCTCAGCTaGAGGCCATCACTAGGCTGC | + |
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Preference number: 4 (lower is better) Translates to: LRVGADRWGTRFMTVLPGLPRLS*RPSLGC Trigger: GCAGCCTAGTGATGGCCTGCAGCTGAGCCTGGGCAG...ACCAGGAAGCACAGTCATAAACCTGGTCCCCCACCTATCAGCACCAACTCTCAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021495.4 |
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| CDS-3UTR CCA 90 bp | GTTGGTGCTGATAGGTGGGGGACCAGGTTTATGACTGTGCTTCCTGGTGACCTTCGGGAAGCCACCCCATaGCTGATGAACAGCACCAGG | + |
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Preference number: 4 (lower is better) Translates to: VGADRWGTRFMTVLPGDLREATP*LMNSTR Trigger: CCTGGTGCTGTTCATCAGCCATGGGGTGGCTTCCCG...AAGGTCACCAGGAAGCACAGTCATAAACCTGGTCCCCCACCTATCAGCACCAAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021495.4 |
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| CDS-3UTR CCA 90 bp | CTGAGAGTTGGTGCTGATAGGTGGGGGACCAGGTTTATGACTGTGCTTCCTGGTTCTTCTTGGCCTTGCTaGAGGCTGAGGCCTAGGCCA | + |
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Preference number: 4 (lower is better) Translates to: LRVGADRWGTRFMTVLPGSSWPC*RLRPRP Trigger: TGGCCTAGGCCTCAGCCTCCAGCAAGGCCAAGAAGA...ACCAGGAAGCACAGTCATAAACCTGGTCCCCCACCTATCAGCACCAACTCTCAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021495.4 |
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| CDS-3UTR CCA 90 bp | GTTGGTGCTGATAGGTGGGGGACCAGGTTTATGACTGTGCTTCCTGGTGACCTTTGGAGCTTGTCTTCTTaGCCTTGCTGGAGGCTGAGG | + |
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Preference number: 4 (lower is better) Translates to: VGADRWGTRFMTVLPGDLWSLSS*PCWRLR Trigger: CCTCAGCCTCCAGCAAGGCCAAGAAGACAAGCTCCA...AAGGTCACCAGGAAGCACAGTCATAAACCTGGTCCCCCACCTATCAGCACCAAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021495.4 |
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| CDS-3UTR CCA 90 bp | GCGGACCAGTCTTTTACAGAACTTTGTAGAGCTAGACTGAGCAGGAGAGGCCTGTCATGGGCACCTGTGTaGTCCTTTTGGGGGTCACAT | + |
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Preference number: 4 (lower is better) Translates to: ADQSFTELCRARLSRRGLSWAPV*SFWGSH Trigger: ATGTGACCCCCAAAAGGACCACACAGGTGCCCATGA...CAGGCCTCTCCTGCTCAGTCTAGCTCTACAAAGTTCTGTAAAAGACTGGTCCGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000021495.4 |
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| CDS-3UTR CCA 90 bp | GGCCCAGAGAGGGACATTTCCATTCCCATGTTACAGAGCTACCAGTGGCATTTCCCTGGATGCCCAGCTTaGGGAGGACATTTTCCAGTT | + |
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Preference number: 4 (lower is better) Translates to: GPERDISIPMLQSYQWHFPGCPA*GGHFPV Trigger: AACTGGAAAATGTCCTCCCCAAGCTGGGCATCCAGG...GAAATGCCACTGGTAGCTCTGTAACATGGGAATGGAAATGTCCCTCTCTGGGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021495.4 |
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| CDS-3UTR GCA 90 bp | GAGGGACATTTCCATTCCCATGTTACAGAGCTACCAGTGGCATTTCAGAAGCTCAGGCCATCACTAGGCTaGCTGAATCTCTGTAGCAGC | + |
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Preference number: 4 (lower is better) Translates to: EGHFHSHVTELPVAFQKLRPSLG*LNLCSS Trigger: GCTGCTACAGAGATTCAGGCAGCCTAGTGATGGCCT...GAGCTTCTGAAATGCCACTGGTAGCTCTGTAACATGGGAATGGAAATGTCCCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021495.4 |
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| CDS-3UTR TCA 90 bp | GATTTGATACCTTTGTTTGTGGTGAGACACTTTGACCCTGATTACTCAAGTATGGGCCTTGCTGGAGGCTaGGGCCTAGGCCATCTAGGA | + |
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Preference number: 4 (lower is better) Translates to: DLIPLFVVRHFDPDYSSMGLAGG*GLGHLG Trigger: TCCTAGATGGCCTAGGCCTCAGCCTCCAGCAAGGCC...CATACTTGAGTAATCAGGGTCAAAGTGTCTCACCACAAACAAAGGTATCAAATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021495.4 |
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| CDS-3UTR TCA 90 bp | AGACTGAGCAGGAGAGGCCTGGAGTCTGGACACAACTATGTCACATATAAGATGGCAGAAAGGGTCTGGTaGATTCTATCTTCAGGGAGC | + |
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Preference number: 4 (lower is better) Translates to: RLSRRGLESGHNYVTYKMAERVW*ILSSGS Trigger: GCTCCCTGAAGATAGAATTCACCAGACCCTTTCTGC...CATCTTATATGTGACATAGTTGTGTCCAGACTCCAGGCCTCTCCTGCTCAGTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021495.4 |
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| CDS-3UTR TCA 90 bp | GCGGACCAGTCTTTTACAGAACTTTGTAGAGCTAGACTGAGCAGGAGAGGCCTGTGGCTACATAGTTGTTaGTCTGCTTCTTGGCGATTT | + |
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Preference number: 4 (lower is better) Translates to: ADQSFTELCRARLSRRGLWLHSC*SASWRF Trigger: AAATCGCCAAGAAGCAGATCAACAACTATGTAGCCA...CAGGCCTCTCCTGCTCAGTCTAGCTCTACAAAGTTCTGTAAAAGACTGGTCCGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021495.4 |
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| CDS-3UTR TCA 90 bp | GTTGGTGCTGATAGGTGGGGGACCAGGTTTATGACTGTGCTTCCTGGTGACCTTTCTGCCACTTGGCTTTaGAGAAGATGTAATTTACCA | + |
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Preference number: 4 (lower is better) Translates to: VGADRWGTRFMTVLPGDLSATWL*RRCNLP Trigger: TGGTAAATTACATCTTCTTCAAAGCCAAGTGGCAGA...AAGGTCACCAGGAAGCACAGTCATAAACCTGGTCCCCCACCTATCAGCACCAAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021495.4 |
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| CDS-3UTR GCA 90 bp | GCGGACCAGTCTTTTACAGAACTTTGTAGAGCTAGACTGAGCAGGAGAGGCCTGTCCATCATGGATTTGTaGACCATCTCAGACAACTTG | + |
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Preference number: 4 (lower is better) Translates to: ADQSFTELCRARLSRRGLSIMDL*TISDNL Trigger: CAAGTTGTCTGAGATGGTGCACAAATCCATGATGGA...CAGGCCTCTCCTGCTCAGTCTAGCTCTACAAAGTTCTGTAAAAGACTGGTCCGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021495.4 |
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| CDS-3UTR CCA 90 bp | TTCCCATGTTACAGAGCTACCAGTGGCATTTCAGAAGCTCAATCCAGTGTCCTTTGTTGGAAGCCCTTGTaGAGCTTGTCTTCTTGGCCT | + |
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Preference number: 4 (lower is better) Translates to: FPCYRATSGISEAQSSVLCWKPL*SLSSWP Trigger: AGGCCAAGAAGACAAGCTCCACAAGGGCTTCCAACA...AAGGACACTGGATTGAGCTTCTGAAATGCCACTGGTAGCTCTGTAACATGGGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021495.4 |
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| CDS-3UTR TCA 90 bp | TTCCCATGTTACAGAGCTACCAGTGGCATTTCAGAAGCTCAATCCAGTGTCCTTAGGCCCTGTAGAGTCTaGAAGCAAAGTCTTTGCTAC | + |
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Preference number: 4 (lower is better) Translates to: FPCYRATSGISEAQSSVLRPCRV*KQSLCY Trigger: GTAGCAAAGACTTTGCTTTCAGACTCTACAGGGCCT...AAGGACACTGGATTGAGCTTCTGAAATGCCACTGGTAGCTCTGTAACATGGGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021495.4 |
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| CDS-3UTR TCA 90 bp | GTAAGAATCTCACAGGTTGCTGAATGGGCTTCTAGTTCTGTTCCTTCACTGGACGAGAAGAAGACATTCTaGCCAGGGGATTCAGAAACC | + |
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Preference number: 4 (lower is better) Translates to: VRISQVAEWASSSVPSLDEKKTF*PGDSET Trigger: GGTTTCTGAATCCCCTGGTCAGAATGTCTTCTTCTC...GTCCAGTGAAGGAACAGAACTAGAAGCCCATTCAGCAACCTGTGAGATTCTTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021495.4 |
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| CDS-3UTR GCA 90 bp | TTCCCATGTTACAGAGCTACCAGTGGCATTTCAGAAGCTCAATCCAGTGTCCTTGTCCCGGATATGTACTaGTGGGTCTTTAAAAAGGGC | + |
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Preference number: 4 (lower is better) Translates to: FPCYRATSGISEAQSSVLVPDMY*WVFKKG Trigger: GCCCTTTTTAAAGACCCAGCAGTACATATCCGGGAC...AAGGACACTGGATTGAGCTTCTGAAATGCCACTGGTAGCTCTGTAACATGGGAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021495.4 |
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| 3UTR CAA 72 bp | ACCACCTCAGCCAGCCAGGCTTGTGATTTGATACCTTaGTTTGTGGTGAGACACTTTGACCCTGATTACTCA | + |
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Preference number: 4 (lower is better) Translates to: TTSASQACDLIP*FVVRHFDPDYS Trigger: TGAGTAATCAGGGTCAAAGTGTCTCACCACAAACAAAGGTATCAAATCACAAGCCTGGCTGGCTGAGGTGGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021495.4 |
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| CDS-3UTR CCA 90 bp | TTCCCATGTTACAGAGCTACCAGTGGCATTTCAGAAGCTCAATCCAGTGTCCTTCCGGATATGTACTGCTaGGTCTTTAAAAAGGGCACT | + |
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Preference number: 4 (lower is better) Translates to: FPCYRATSGISEAQSSVLPDMYC*VFKKGT Trigger: AGTGCCCTTTTTAAAGACCCAGCAGTACATATCCGG...AAGGACACTGGATTGAGCTTCTGAAATGCCACTGGTAGCTCTGTAACATGGGAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021495.4 |
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| CDS-3UTR CCA 90 bp | TTCCCATGTTACAGAGCTACCAGTGGCATTTCAGAAGCTCAATCCAGTGTCCTTCTACAATCTTGCCCTTaGTCTGCTTGGCTACATAGT | + |
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Preference number: 4 (lower is better) Translates to: FPCYRATSGISEAQSSVLLQSCP*SAWLHS Trigger: ACTATGTAGCCAAGCAGACCAAGGGCAAGATTGTAG...AAGGACACTGGATTGAGCTTCTGAAATGCCACTGGTAGCTCTGTAACATGGGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021495.4 |
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| CDS-3UTR CCA 90 bp | TTCCCATGTTACAGAGCTACCAGTGGCATTTCAGAAGCTCAATCCAGTGTCCTTCCTCAATGGAGAACTTaGGGAGGTAAAGATCTAAGC | + |
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Preference number: 4 (lower is better) Translates to: FPCYRATSGISEAQSSVLPQWRT*GGKDLS Trigger: GCTTAGATCTTTACCTCCCCAAGTTCTCCATTGAGG...AAGGACACTGGATTGAGCTTCTGAAATGCCACTGGTAGCTCTGTAACATGGGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021495.4 |
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| CDS-3UTR CCA 90 bp | GGACACAACTATGTCACATATAAGATGGTAGGACCTTGGAGAAATCTAGTGACCCTTTTGGGGGTCACATaGAAATCCATCTTGTGGGTG | + |
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Preference number: 4 (lower is better) Translates to: GHNYVTYKMVGPWRNLVTLLGVT*KSILWV Trigger: CACCCACAAGATGGATTTCCATGTGACCCCCAAAAG...GGTCACTAGATTTCTCCAAGGTCCTACCATCTTATATGTGACATAGTTGTGTCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021495.4 |
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| CDS-3UTR TCA 90 bp | CCCTGTGTAAGAATCTCACAGGTTGCTGAATGGGCTTCTAGTTCTGTTCCTTCAAACGAAAAGTATATGTaGATCCTCCATAAGGGTCAG | + |
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Preference number: 4 (lower is better) Translates to: PCVRISQVAEWASSSVPSNEKYM*ILHKGQ Trigger: CTGACCCTTATGGAGGATTCACATATACTTTTCGTT...TGAAGGAACAGAACTAGAAGCCCATTCAGCAACCTGTGAGATTCTTACACAGGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021495.4 |
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| CDS-3UTR CCA 90 bp | ACATATAAGATGGTAGGACCTTGGAGAAATCTAGTGACCTCTTTAGGGTCAGTGCTTCAACCTCCATCATaGATTTGTGCACCATCTCAG | + |
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Preference number: 4 (lower is better) Translates to: TYKMVGPWRNLVTSLGSVLQPPS*ICAPSQ Trigger: CTGAGATGGTGCACAAATCCATGATGGAGGTTGAAG...CACTGACCCTAAAGAGGTCACTAGATTTCTCCAAGGTCCTACCATCTTATATGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021495.4 |
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| CDS GCA 90 bp | TTAAAAAGGGCACTGCCCAGGCTCAGCTGCAGGCCATCACTAGGCTaGCTGAATCTCTGTAGCAGCTGTTGGAAGCCCTTGTGGAGCTTG | + |
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Preference number: 5 (lower is better) Translates to: LKRALPRLSCRPSLG*LNLCSSCWKPLWSL Trigger: CAAGCTCCACAAGGGCTTCCAACAGCTGCTACAGAGATTCAGGCAGCCTAGTGATGGCCTGCAGCTGAGCCTGGGCAGTGCCCTTTTTAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021495.4 |
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| CDS CCA 90 bp | CAGTGTCTTCATGGCACTCAGGAAGTCGTCCCGGATATGTACTGCTaGGTCTTTAAAAAGGGCACTGCCCAGGCTCAGCTGCAGGCCATC | + |
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Preference number: 5 (lower is better) Translates to: QCLHGTQEVVPDMYC*VFKKGTAQAQLQAI Trigger: GATGGCCTGCAGCTGAGCCTGGGCAGTGCCCTTTTTAAAGACCCAGCAGTACATATCCGGGACGACTTCCTGAGTGCCATGAAGACACTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021495.4 |
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| CDS-3UTR CAA 90 bp | GTTGGTGCTGATAGGTGGGGGACCAGGTTTATGACTGTGCTTCCTGGTGACCTTTCCACCTGCTTCATCTaGCCCTCGCTGGGGAGAATA | + |
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Preference number: 5 (lower is better) Translates to: VGADRWGTRFMTVLPGDLSTCFI*PSLGRI Trigger: TATTCTCCCCAGCGAGGGCAAGATGAAGCAGGTGGA...AAGGTCACCAGGAAGCACAGTCATAAACCTGGTCCCCCACCTATCAGCACCAAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021495.4 |
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| CDS-3UTR CAA 90 bp | CTGAGAGTTGGTGCTGATAGGTGGGGGACCAGGTTTATGACTGTGCTTCCTGGTTCCTGGATGCCCAGCTaGGGGAGGACATTTTCCAGT | + |
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Preference number: 5 (lower is better) Translates to: LRVGADRWGTRFMTVLPGSWMPS*GRTFSS Trigger: ACTGGAAAATGTCCTCCCCAAGCTGGGCATCCAGGA...ACCAGGAAGCACAGTCATAAACCTGGTCCCCCACCTATCAGCACCAACTCTCAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000021495.4 |
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| CDS TCA 90 bp | AGACATTCTGACCAGGGGATTCAGAAACCAAGGCCCTGTAGAGTCTaGAAGCAAAGTCTTTGCTACTGGGAGGTCCCACAGCACCCACCG | + |
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Preference number: 5 (lower is better) Translates to: RHSDQGIQKPRPCRV*KQSLCYWEVPQHPP Trigger: CGGTGGGTGCTGTGGGACCTCCCAGTAGCAAAGACTTTGCTTTCAGACTCTACAGGGCCTTGGTTTCTGAATCCCCTGGTCAGAATGTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021495.4 |
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| CDS-3UTR CAA 90 bp | GTTGGTGCTGATAGGTGGGGGACCAGGTTTATGACTGTGCTTCCTGGTGACCTTACCTGTGTGGTCCTTTaGGGGGTCACATGGAAATCC | + |
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Preference number: 5 (lower is better) Translates to: VGADRWGTRFMTVLPGDLTCVVL*GVTWKS Trigger: GGATTTCCATGTGACCCCCAAAAGGACCACACAGGT...AAGGTCACCAGGAAGCACAGTCATAAACCTGGTCCCCCACCTATCAGCACCAAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000021495.4 |
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| CDS GCA 90 bp | TTAAGCCAGTTCCTCAATGTTCTCTCATCCAGGCCATCCTCCACCTaGTTCATCTTGCCCTCGCTGGGGAGAATAAATAGAGCGATGGCA | + |
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Preference number: 5 (lower is better) Translates to: LSQFLNVLSSRPSST*FILPSLGRINRAMA Trigger: TGCCATCGCTCTATTTATTCTCCCCAGCGAGGGCAAGATGAAGCAGGTGGAGGATGGCCTGGATGAGAGAACATTGAGGAACTGGCTTAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021495.4 |
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| CDS-3UTR CAA 90 bp | GTAAGAATCTCACAGGTTGCTGAATGGGCTTCTAGTTCTGTTCCTTCACTGGACAGCGATGGCATTGCCTaGATAAGGGATCCCCACCAC | + |
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Preference number: 5 (lower is better) Translates to: VRISQVAEWASSSVPSLDSDGIA*IRDPHH Trigger: GTGGTGGGGATCCCTTATCAAGGCAATGCCATCGCT...GTCCAGTGAAGGAACAGAACTAGAAGCCCATTCAGCAACCTGTGAGATTCTTAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021495.4 |
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| CDS TCA 90 bp | CTTCTTGGCGATTTCAGGGTTCCCAAAGTTGGTAGAGAAAGTGTCTaGCATGTACAGTGTCTTCATGGCACTCAGGAAGTCGTCCCGGAT | + |
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Preference number: 5 (lower is better) Translates to: LLGDFRVPKVGRESV*HVQCLHGTQEVVPD Trigger: ATCCGGGACGACTTCCTGAGTGCCATGAAGACACTGTACATGTCAGACACTTTCTCTACCAACTTTGGGAACCCTGAAATCGCCAAGAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021495.4 |
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| CDS TCA 90 bp | TCTGAATGTGAAGATGGCTCCTGTGATGGCAGCTGCTGTGGTTCCTaGCTCTTCAACCTCCATCATGGATTTGTGCACCATCTCAGACAA | + |
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Preference number: 5 (lower is better) Translates to: SECEDGSCDGSCCGS*LFNLHHGFVHHLRQ Trigger: TTGTCTGAGATGGTGCACAAATCCATGATGGAGGTTGAAGAGTCAGGAACCACAGCAGCTGCCATCACAGGAGCCATCTTCACATTCAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021495.4 |
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| CDS-3UTR CAA 90 bp | CCCTGTGTAAGAATCTCACAGGTTGCTGAATGGGCTTCTAGTTCTGTTCCTTCAAGCTGTTGGAAGCCCTaGTGGAGCTTGTCTTCTTGG | + |
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Preference number: 5 (lower is better) Translates to: PCVRISQVAEWASSSVPSSCWKP*WSLSSW Trigger: CCAAGAAGACAAGCTCCACAAGGGCTTCCAACAGCT...TGAAGGAACAGAACTAGAAGCCCATTCAGCAACCTGTGAGATTCTTACACAGGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021495.4 |
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| CDS-3UTR CAA 90 bp | CTGAGAGTTGGTGCTGATAGGTGGGGGACCAGGTTTATGACTGTGCTTCCTGGTACCATCTCAGACAACTaGATATTGGTATGGTCAGTA | + |
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Preference number: 5 (lower is better) Translates to: LRVGADRWGTRFMTVLPGTISDN*ILVWSV Trigger: TACTGACCATACCAATATCAAGTTGTCTGAGATGGT...ACCAGGAAGCACAGTCATAAACCTGGTCCCCCACCTATCAGCACCAACTCTCAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021495.4 |
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| CDS CCA 90 bp | TCCATCATGGATTTGTGCACCATCTCAGACAACTTGATATTGGTATaGTCAGTAATGCCAGACAAGTCAGCATGGGTGGTGAAGACGTCC | + |
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Preference number: 5 (lower is better) Translates to: SIMDLCTISDNLILV*SVMPDKSAWVVKTS Trigger: GGACGTCTTCACCACCCATGCTGACTTGTCTGGCATTACTGACCATACCAATATCAAGTTGTCTGAGATGGTGCACAAATCCATGATGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021495.4 |
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| CDS-3UTR CAA 90 bp | ACATATAAGATGGTAGGACCTTGGAGAAATCTAGTGACCTCTTTAGGGTCAGTGTTAGCCTTCTTCTTCTaGGAATGGGAGTGTCGGCGG | + |
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Preference number: 5 (lower is better) Translates to: TYKMVGPWRNLVTSLGSVLAFFF*EWECRR Trigger: CCGCCGACACTCCCATTCCAAGAAGAAGAAGGCTAA...CACTGACCCTAAAGAGGTCACTAGATTTCTCCAAGGTCCTACCATCTTATATGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021495.4 |
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| CDS-3UTR CAA 90 bp | GCGGACCAGTCTTTTACAGAACTTTGTAGAGCTAGACTGAGCAGGAGAGGCCTGTCAGACAACTTGATATaGGTATGGTCAGTAATGCCA | + |
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Preference number: 5 (lower is better) Translates to: ADQSFTELCRARLSRRGLSDNLI*VWSVMP Trigger: TGGCATTACTGACCATACCAATATCAAGTTGTCTGA...CAGGCCTCTCCTGCTCAGTCTAGCTCTACAAAGTTCTGTAAAAGACTGGTCCGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021495.4 |
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| CDS-3UTR CAA 90 bp | ACATATAAGATGGTAGGACCTTGGAGAAATCTAGTGACCTCTTTAGGGTCAGTGTCAGGGTTCCCAAAGTaGGTAGAGAAAGTGTCTGAC | + |
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Preference number: 5 (lower is better) Translates to: TYKMVGPWRNLVTSLGSVSGFPK*VEKVSD Trigger: GTCAGACACTTTCTCTACCAACTTTGGGAACCCTGA...CACTGACCCTAAAGAGGTCACTAGATTTCTCCAAGGTCCTACCATCTTATATGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021495.4 |
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| CDS-3UTR CAA 90 bp | GATTTGATACCTTTGTTTGTGGTGAGACACTTTGACCCTGATTACTCAAGTATGATAAAGTCTACAATCTaGCCCTTGGTCTGCTTGGCT | + |
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Preference number: 5 (lower is better) Translates to: DLIPLFVVRHFDPDYSSMIKSTI*PLVCLA Trigger: AGCCAAGCAGACCAAGGGCAAGATTGTAGACTTTAT...CATACTTGAGTAATCAGGGTCAAAGTGTCTCACCACAAACAAAGGTATCAAATC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021495.4 |
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| CDS-3UTR CAA 90 bp | ACATATAAGATGGTAGGACCTTGGAGAAATCTAGTGACCTCTTTAGGGTCAGTGGTGCTGTCAAGATCCTaGATAAAGTCTACAATCTTG | + |
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Preference number: 5 (lower is better) Translates to: TYKMVGPWRNLVTSLGSVVLSRS*IKSTIL Trigger: CAAGATTGTAGACTTTATCAAGGATCTTGACAGCAC...CACTGACCCTAAAGAGGTCACTAGATTTCTCCAAGGTCCTACCATCTTATATGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021495.4 |
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| CDS GCA 72 bp | GCACTGCCCAGGCTCAGCTGCAGGCCATCACTAGGCTaGCTGAATCTCTGTAGCAGCTGTTGGAAGCCCTTG | + |
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Preference number: 6 (lower is better) Translates to: ALPRLSCRPSLG*LNLCSSCWKPL Trigger: CAAGGGCTTCCAACAGCTGCTACAGAGATTCAGGCAGCCTAGTGATGGCCTGCAGCTGAGCCTGGGCAGTGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021495.4 |
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| CDS CCA 72 bp | TTCTTGGAATGGGAGTGTCGGCGGGAAGCCACCCCATaGCTGATGAACAGCACCAGGCACAGAATGGGGAAG | + |
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Preference number: 6 (lower is better) Translates to: FLEWECRREATP*LMNSTRHRMGK Trigger: CTTCCCCATTCTGTGCCTGGTGCTGTTCATCAGCCATGGGGTGGCTTCCCGCCGACACTCCCATTCCAAGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021495.4 |
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| CDS CCA 72 bp | CCCACCGAGGACTCTTTAGCCTTCTTCTTCTTGGAATaGGAGTGTCGGCGGGAAGCCACCCCATGGCTGATG | + |
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Preference number: 6 (lower is better) Translates to: PTEDSLAFFFLE*ECRREATPWLM Trigger: CATCAGCCATGGGGTGGCTTCCCGCCGACACTCCCATTCCAAGAAGAAGAAGGCTAAAGAGTCCTCGGTGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021495.4 |
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| CDS CCA 72 bp | AGCAGCTGTTGGAAGCCCTTGTGGAGCTTGTCTTCTTaGCCTTGCTGGAGGCTGAGGCCTAGGCCATCTAGG | + |
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Preference number: 6 (lower is better) Translates to: SSCWKPLWSLSS*PCWRLRPRPSR Trigger: CCTAGATGGCCTAGGCCTCAGCCTCCAGCAAGGCCAAGAAGACAAGCTCCACAAGGGCTTCCAACAGCTGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021495.4 |
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| CDS CAA 72 bp | ACAGCACCCACCGAGGACTCTTTAGCCTTCTTCTTCTaGGAATGGGAGTGTCGGCGGGAAGCCACCCCATGG | + |
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Preference number: 6 (lower is better) Translates to: TAPTEDSLAFFF*EWECRREATPW Trigger: CCATGGGGTGGCTTCCCGCCGACACTCCCATTCCAAGAAGAAGAAGGCTAAAGAGTCCTCGGTGGGTGCTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021495.4 |
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| CDS TCA 72 bp | CCTTGTGGAGCTTGTCTTCTTGGCCTTGCTGGAGGCTaGGGCCTAGGCCATCTAGGATCTGGGTCTTCGTCT | + |
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Preference number: 6 (lower is better) Translates to: PCGACLLGLAGG*GLGHLGSGSSS Trigger: AGACGAAGACCCAGATCCTAGATGGCCTAGGCCTCAGCCTCCAGCAAGGCCAAGAAGACAAGCTCCACAAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021495.4 |
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| CDS CCA 72 bp | CATGGCACTCAGGAAGTCGTCCCGGATATGTACTGCTaGGTCTTTAAAAAGGGCACTGCCCAGGCTCAGCTG | + |
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Preference number: 6 (lower is better) Translates to: HGTQEVVPDMYC*VFKKGTAQAQL Trigger: CAGCTGAGCCTGGGCAGTGCCCTTTTTAAAGACCCAGCAGTACATATCCGGGACGACTTCCTGAGTGCCATG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021495.4 |
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| CDS CAA 72 bp | AATCTCTGTAGCAGCTGTTGGAAGCCCTTGTGGAGCTaGTCTTCTTGGCCTTGCTGGAGGCTGAGGCCTAGG | + |
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Preference number: 6 (lower is better) Translates to: NLCSSCWKPLWS*SSWPCWRLRPR Trigger: CCTAGGCCTCAGCCTCCAGCAAGGCCAAGAAGACAAGCTCCACAAGGGCTTCCAACAGCTGCTACAGAGATT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021495.4 |
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| CDS CCA 72 bp | CCATCACTAGGCTGCCTGAATCTCTGTAGCAGCTGTTaGAAGCCCTTGTGGAGCTTGTCTTCTTGGCCTTGC | + |
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Preference number: 6 (lower is better) Translates to: PSLGCLNLCSSC*KPLWSLSSWPC Trigger: GCAAGGCCAAGAAGACAAGCTCCACAAGGGCTTCCAACAGCTGCTACAGAGATTCAGGCAGCCTAGTGATGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021495.4 |
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| CDS TCA 72 bp | GACCAGGGGATTCAGAAACCAAGGCCCTGTAGAGTCTaGAAGCAAAGTCTTTGCTACTGGGAGGTCCCACAG | + |
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Preference number: 6 (lower is better) Translates to: DQGIQKPRPCRV*KQSLCYWEVPQ Trigger: CTGTGGGACCTCCCAGTAGCAAAGACTTTGCTTTCAGACTCTACAGGGCCTTGGTTTCTGAATCCCCTGGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021495.4 |
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| CDS CCA 72 bp | CTTCACGGTTCATCATGGGCACCTGTGTGGTCCTTTTaGGGGTCACATGGAAATCCATCTTGTGGGTGTTTG | + |
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Preference number: 6 (lower is better) Translates to: LHGSSWAPVWSF*GSHGNPSCGCL Trigger: CAAACACCCACAAGATGGATTTCCATGTGACCCCCAAAAGGACCACACAGGTGCCCATGATGAACCGTGAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021495.4 |
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| CDS GCA 72 bp | TTCCTCAATGTTCTCTCATCCAGGCCATCCTCCACCTaGTTCATCTTGCCCTCGCTGGGGAGAATAAATAGA | + |
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Preference number: 6 (lower is better) Translates to: FLNVLSSRPSST*FILPSLGRINR Trigger: TCTATTTATTCTCCCCAGCGAGGGCAAGATGAAGCAGGTGGAGGATGGCCTGGATGAGAGAACATTGAGGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021495.4 |
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| CDS CAA 72 bp | TCTTCACGGTTCATCATGGGCACCTGTGTGGTCCTTTaGGGGGTCACATGGAAATCCATCTTGTGGGTGTTT | + |
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Preference number: 6 (lower is better) Translates to: SSRFIMGTCVVL*GVTWKSILWVF Trigger: AAACACCCACAAGATGGATTTCCATGTGACCCCCAAAAGGACCACACAGGTGCCCATGATGAACCGTGAAGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021495.4 |
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| CDS CCA 72 bp | AATACCCATCTTCACGGTTCATCATGGGCACCTGTGTaGTCCTTTTGGGGGTCACATGGAAATCCATCTTGT | + |
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Preference number: 6 (lower is better) Translates to: NTHLHGSSWAPV*SFWGSHGNPSC Trigger: ACAAGATGGATTTCCATGTGACCCCCAAAAGGACCACACAGGTGCCCATGATGAACCGTGAAGATGGGTATT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021495.4 |
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| CDS CAA 90 bp | TCAACCTCCATCATGGATTTGTGCACCATCTCAGACAACTTGATATaGGTATGGTCAGTAATGCCAGACAAGTCAGCATGGGTGGTGAAG | + |
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Preference number: 6 (lower is better) Translates to: STSIMDLCTISDNLI*VWSVMPDKSAWVVK Trigger: CTTCACCACCCATGCTGACTTGTCTGGCATTACTGACCATACCAATATCAAGTTGTCTGAGATGGTGCACAAATCCATGATGGAGGTTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021495.4 |
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| CDS CAA 90 bp | GACTCTTCAACCTCCATCATGGATTTGTGCACCATCTCAGACAACTaGATATTGGTATGGTCAGTAATGCCAGACAAGTCAGCATGGGTG | + |
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Preference number: 6 (lower is better) Translates to: DSSTSIMDLCTISDN*ILVWSVMPDKSAWV Trigger: CACCCATGCTGACTTGTCTGGCATTACTGACCATACCAATATCAAGTTGTCTGAGATGGTGCACAAATCCATGATGGAGGTTGAAGAGTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021495.4 |
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| CDS TCA 72 bp | GATTTCAGGGTTCCCAAAGTTGGTAGAGAAAGTGTCTaGCATGTACAGTGTCTTCATGGCACTCAGGAAGTC | + |
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Preference number: 6 (lower is better) Translates to: DFRVPKVGRESV*HVQCLHGTQEV Trigger: GACTTCCTGAGTGCCATGAAGACACTGTACATGTCAGACACTTTCTCTACCAACTTTGGGAACCCTGAAATC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021495.4 |
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| CDS GCA 72 bp | GTGGTTCCTGACTCTTCAACCTCCATCATGGATTTGTaGACCATCTCAGACAACTTGATATTGGTATGGTCA | + |
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Preference number: 6 (lower is better) Translates to: VVPDSSTSIMDL*TISDNLILVWS Trigger: TGACCATACCAATATCAAGTTGTCTGAGATGGTGCACAAATCCATGATGGAGGTTGAAGAGTCAGGAACCAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021495.4 |
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| CDS CAA 72 bp | TTGATCTGCTTCTTGGCGATTTCAGGGTTCCCAAAGTaGGTAGAGAAAGTGTCTGACATGTACAGTGTCTTC | + |
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Preference number: 6 (lower is better) Translates to: LICFLAISGFPK*VEKVSDMYSVF Trigger: GAAGACACTGTACATGTCAGACACTTTCTCTACCAACTTTGGGAACCCTGAAATCGCCAAGAAGCAGATCAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021495.4 |
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| CDS CAA 72 bp | TTTACCACTATCATGACATGGGTGCTGTCAAGATCCTaGATAAAGTCTACAATCTTGCCCTTGGTCTGCTTG | + |
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Preference number: 6 (lower is better) Translates to: FTTIMTWVLSRS*IKSTILPLVCL Trigger: CAAGCAGACCAAGGGCAAGATTGTAGACTTTATCAAGGATCTTGACAGCACCCATGTCATGATAGTGGTAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021495.4 |
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| CDS CAA 72 bp | ATCATGGATTTGTGCACCATCTCAGACAACTTGATATaGGTATGGTCAGTAATGCCAGACAAGTCAGCATGG | + |
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Preference number: 6 (lower is better) Translates to: IMDLCTISDNLI*VWSVMPDKSAW Trigger: CCATGCTGACTTGTCTGGCATTACTGACCATACCAATATCAAGTTGTCTGAGATGGTGCACAAATCCATGAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021495.4 |
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| CDS CAA 72 bp | ACCTCCATCATGGATTTGTGCACCATCTCAGACAACTaGATATTGGTATGGTCAGTAATGCCAGACAAGTCA | + |
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Preference number: 6 (lower is better) Translates to: TSIMDLCTISDN*ILVWSVMPDKS Trigger: TGACTTGTCTGGCATTACTGACCATACCAATATCAAGTTGTCTGAGATGGTGCACAAATCCATGATGGAGGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021495.4 |
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