Pregenerated sensors for SERPINA3N (Mus musculus)
Ensembl gene IDs: ENSMUSG00000021091Ensembl transcript IDs: ENSMUST00000021506.6
Found 87 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CCAGGCATGCCAAGGCCAAGCAGAGCATGGAAGCCAAAATGCACATaGAGACCCACAGACAGGCTCAATGCCTGGCTCCCGGGAAGAAGC | + |
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Preference number: 1 (lower is better) Translates to: PGMPRPSRAWKPKCT*RPTDRLNAWLPGRS Trigger: GCTTCTTCCCGGGAGCCAGGCATTGAGCCTGTCTGTGGGTCTCCATGTGCATTTTGGCTTCCATGCTCTGCTTGGCCTTGGCATGCCTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021506.6 |
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| 3UTR GCA 90 bp | AGCATGGAAGCCAAAATGCACATGGAGACCCACAGACAGGCTCAATaGCTGGCTCCCGGGAAGAAGCGTCAACACTTGGGGAGTTCTAGT | + |
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Preference number: 1 (lower is better) Translates to: SMEAKMHMETHRQAQ*LAPGKKRQHLGSSS Trigger: ACTAGAACTCCCCAAGTGTTGACGCTTCTTCCCGGGAGCCAGGCATTGAGCCTGTCTGTGGGTCTCCATGTGCATTTTGGCTTCCATGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021506.6 |
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| 3UTR TCA 90 bp | CAGGAACATGGGCTAGTGCTACCAAGAAGTCTGGGAGCATGGCACTaGCTTCCCACAGGGATGTCTGTGCATGAGGTTATAACACAGTTA | + |
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Preference number: 1 (lower is better) Translates to: QEHGLVLPRSLGAWH*LPTGMSVHEVITQL Trigger: TAACTGTGTTATAACCTCATGCACAGACATCCCTGTGGGAAGTCAGTGCCATGCTCCCAGACTTCTTGGTAGCACTAGCCCATGTTCCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021506.6 |
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| 3UTR-3UTR GCA 90 bp | GCTGCAGATAGACACGGGGCAGCAAGCTTTCCTCTTGGTCCATATGGGTTGGCCCACAGACAGGCTCAATaGCTGGCTCCCGGGAAGAAG | + |
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Preference number: 2 (lower is better) Translates to: AADRHGAASFPLGPYGLAHRQAQ*LAPGKK Trigger: CTTCTTCCCGGGAGCCAGGCATTGAGCCTGTCTGTG...GGCCAACCCATATGGACCAAGAGGAAAGCTTGCTGCCCCGTGTCTATCTGCAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021506.6 |
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| 3UTR-3UTR CCA 90 bp | GCTGCAGATAGACACGGGGCAGCAAGCTTTCCTCTTGGTCCATATGGGTTGGCCGCCCAGGCTTTTGGGTaGAGGCAGATACAGGGAGAG | + |
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Preference number: 2 (lower is better) Translates to: AADRHGAASFPLGPYGLAAQAFG*RQIQGE Trigger: CTCTCCCTGTATCTGCCTCCACCCAAAAGCCTGGGC...GGCCAACCCATATGGACCAAGAGGAAAGCTTGCTGCCCCGTGTCTATCTGCAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021506.6 |
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| 3UTR-3UTR TCA 90 bp | GCTGCAGATAGACACGGGGCAGCAAGCTTTCCTCTTGGTCCATATGGGTTGGCCAGTCTAAACTGGGACTaGGCTTACTTGATGGGGCCC | + |
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Preference number: 2 (lower is better) Translates to: AADRHGAASFPLGPYGLASLNWD*AYLMGP Trigger: GGGCCCCATCAAGTAAGCTCAGTCCCAGTTTAGACT...GGCCAACCCATATGGACCAAGAGGAAAGCTTGCTGCCCCGTGTCTATCTGCAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021506.6 |
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| 3UTR CAA 90 bp | GCAGATAGACACGGGGCAGCAAGCTTTCCTCTTGGTCCATATGGGTaGGCCTGTAAGGTTGCACAGTCCCATCAAGACAGCAAGGCTGAA | + |
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Preference number: 2 (lower is better) Translates to: ADRHGAASFPLGPYG*ACKVAQSHQDSKAE Trigger: TTCAGCCTTGCTGTCTTGATGGGACTGTGCAACCTTACAGGCCAACCCATATGGACCAAGAGGAAAGCTTGCTGCCCCGTGTCTATCTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021506.6 |
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| 3UTR-3UTR GCA 90 bp | TTTTGCTCCTACCTCTTTATTCTGGTTGGTGGTGTTCCTCTTTTGTGTGAGGTTGCATGGAAGCCAAAATaGACATGGAGACCCACAGAC | + |
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Preference number: 2 (lower is better) Translates to: FCSYLFILVGGVPLLCEVAWKPK*TWRPTD Trigger: GTCTGTGGGTCTCCATGTGCATTTTGGCTTCCATGC...AACCTCACACAAAAGAGGAACACCACCAACCAGAATAAAGAGGTAGGAGCAAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000021506.6 |
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| 3UTR-3UTR GCA 90 bp | TTTTGCTCCTACCTCTTTATTCTGGTTGGTGGTGTTCCTCTTTTGTGTGAGGTTTATCTAATCCAGGCATaGCAAGGCCAAGCAGAGCAT | + |
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Preference number: 2 (lower is better) Translates to: FCSYLFILVGGVPLLCEVYLIQA*QGQAEH Trigger: ATGCTCTGCTTGGCCTTGGCATGCCTGGATTAGATA...AACCTCACACAAAAGAGGAACACCACCAACCAGAATAAAGAGGTAGGAGCAAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021506.6 |
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| 3UTR-3UTR CAA 90 bp | CACAGGCCCCATGCAGCTGCAGAAGTGAGGGCTCTAACTCTGTGCCAGATGTGGATGGGGCCCAGGCTTTaGGGTGGAGGCAGATACAGG | + |
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Preference number: 3 (lower is better) Translates to: HRPHAAAEVRALTLCQMWMGPRL*GGGRYR Trigger: CCTGTATCTGCCTCCACCCAAAAGCCTGGGCCCCAT...CCACATCTGGCACAGAGTTAGAGCCCTCACTTCTGCAGCTGCATGGGGCCTGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021506.6 |
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| 3UTR GCA 72 bp | GCCAAAATGCACATGGAGACCCACAGACAGGCTCAATaGCTGGCTCCCGGGAAGAAGCGTCAACACTTGGGG | + |
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Preference number: 3 (lower is better) Translates to: AKMHMETHRQAQ*LAPGKKRQHLG Trigger: CCCCAAGTGTTGACGCTTCTTCCCGGGAGCCAGGCATTGAGCCTGTCTGTGGGTCTCCATGTGCATTTTGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021506.6 |
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| 3UTR GCA 72 bp | GAAAGGAGCTGCTCTGACCCACAGGCCCCATGCAGCTaGAGAAGTGAGGGCTCTAACTCTGTGCCAGATGTG | + |
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Preference number: 3 (lower is better) Translates to: ERSCSDPQAPCS*RSEGSNSVPDV Trigger: CACATCTGGCACAGAGTTAGAGCCCTCACTTCTGCAGCTGCATGGGGCCTGTGGGTCAGAGCAGCTCCTTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021506.6 |
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| 3UTR CCA 72 bp | ACGGGGCAGCAAGCTTTCCTCTTGGTCCATATGGGTTaGCCTGTAAGGTTGCACAGTCCCATCAAGACAGCA | + |
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Preference number: 3 (lower is better) Translates to: TGQQAFLLVHMG*PVRLHSPIKTA Trigger: TGCTGTCTTGATGGGACTGTGCAACCTTACAGGCCAACCCATATGGACCAAGAGGAAAGCTTGCTGCCCCGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021506.6 |
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| 3UTR TCA 72 bp | GGGCTAGTGCTACCAAGAAGTCTGGGAGCATGGCACTaGCTTCCCACAGGGATGTCTGTGCATGAGGTTATA | + |
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Preference number: 3 (lower is better) Translates to: GLVLPRSLGAWH*LPTGMSVHEVI Trigger: TATAACCTCATGCACAGACATCCCTGTGGGAAGTCAGTGCCATGCTCCCAGACTTCTTGGTAGCACTAGCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021506.6 |
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| 3UTR CCA 72 bp | CTATCTAATCCAGGCATGCCAAGGCCAAGCAGAGCATaGAAGCCAAAATGCACATGGAGACCCACAGACAGG | + |
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Preference number: 3 (lower is better) Translates to: LSNPGMPRPSRA*KPKCTWRPTDR Trigger: CCTGTCTGTGGGTCTCCATGTGCATTTTGGCTTCCATGCTCTGCTTGGCCTTGGCATGCCTGGATTAGATAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021506.6 |
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| 3UTR GCA 72 bp | GGTTATAACACAGTTAGTCACTATCTAATCCAGGCATaGCAAGGCCAAGCAGAGCATGGAAGCCAAAATGCA | + |
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Preference number: 3 (lower is better) Translates to: GYNTVSHYLIQA*QGQAEHGSQNA Trigger: TGCATTTTGGCTTCCATGCTCTGCTTGGCCTTGGCATGCCTGGATTAGATAGTGACTAACTGTGTTATAACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021506.6 |
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| CDS-3UTR TCA 90 bp | GGAGGCAGATACAGGGAGAGAGCAGGGGTAGGGGACAAGACAAATTTCAGGCTCGCTGGAAGTCTGCTGTaGAGGCCTCAGCCTGGTACA | + |
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Preference number: 4 (lower is better) Translates to: GGRYRERAGVGDKTNFRLAGSLL*RPQPGT Trigger: TGTACCAGGCTGAGGCCTTCACAGCAGACTTCCAGC...GAGCCTGAAATTTGTCTTGTCCCCTACCCCTGCTCTCTCCCTGTATCTGCCTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021506.6 |
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| CDS-3UTR TCA 90 bp | TACTTGATGGGGCCCAGGCTTTTGGGTGGAGGCAGATACAGGGAGAGAGCAGGGGATCCTTGGTTCCTGTaGTTGCAGACAGGTCAGCCT | + |
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Preference number: 4 (lower is better) Translates to: YLMGPRLLGGGRYRERAGDPWFL*LQTGQP Trigger: AGGCTGACCTGTCTGCAATCACAGGAACCAAGGATC...CCCTGCTCTCTCCCTGTATCTGCCTCCACCCAAAAGCCTGGGCCCCATCAAGTA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000021506.6 |
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| CDS-3UTR GCA 90 bp | AGGCAGATACAGGGAGAGAGCAGGGGTAGGGGACAAGACAAATTTCAGGCTCAGCAGGGTGTTGCCCTTTaGTCCCAGGGACATGACGGC | + |
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Preference number: 4 (lower is better) Translates to: RQIQGESRGRGQDKFQAQQGVAL*SQGHDG Trigger: GCCGTCATGTCCCTGGGAGCAAAGGGCAACACCCTG...CTGAGCCTGAAATTTGTCTTGTCCCCTACCCCTGCTCTCTCCCTGTATCTGCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021506.6 |
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| CDS-3UTR CCA 90 bp | GGAACATGGGCTAGTGCTACCAAGAAGTCTGGGAGCATGGCACTGACTTCCCACTGCCCAAAGCCCTGGTaGATGTCTGCCTCAGAGGTC | + |
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Preference number: 4 (lower is better) Translates to: GTWASATKKSGSMALTSHCPKPW*MSASEV Trigger: GACCTCTGAGGCAGACATCCACCAGGGCTTTGGGCA...GTGGGAAGTCAGTGCCATGCTCCCAGACTTCTTGGTAGCACTAGCCCATGTTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021506.6 |
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| CDS-3UTR TCA 90 bp | CACAGGCCCCATGCAGCTGCAGAAGTGAGGGCTCTAACTCTGTGCCAGATGTGGTGGAGAAGACTTCCCTaGTGCCCAGCTTTGAAAGGA | + |
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Preference number: 4 (lower is better) Translates to: HRPHAAAEVRALTLCQMWWRRLP*CPALKG Trigger: TCCTTTCAAAGCTGGGCATCAGGGAAGTCTTCTCCA...CCACATCTGGCACAGAGTTAGAGCCCTCACTTCTGCAGCTGCATGGGGCCTGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021506.6 |
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| CDS-3UTR CCA 90 bp | AGGCATGCCAAGGCCAAGCAGAGCATGGAAGCCAAAATGCACATGGAGACCCACCTCGGAAGTAGGGTGTaGTCAGGTCCTCCATGCTCA | + |
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Preference number: 4 (lower is better) Translates to: RHAKAKQSMEAKMHMETHLGSRV*SGPPCS Trigger: TGAGCATGGAGGACCTGACCACACCCTACTTCCGAG...GTGGGTCTCCATGTGCATTTTGGCTTCCATGCTCTGCTTGGCCTTGGCATGCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021506.6 |
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| CDS-3UTR CCA 90 bp | GCTGCAGATAGACACGGGGCAGCAAGCTTTCCTCTTGGTCCATATGGGTTGGCCGAGAACTTGGGCAGGTaGAGCTCATCTATCATCCTG | + |
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Preference number: 4 (lower is better) Translates to: AADRHGAASFPLGPYGLAENLGR*SSSIIL Trigger: CAGGATGATAGATGAGCTCCACCTGCCCAAGTTCTC...GGCCAACCCATATGGACCAAGAGGAAAGCTTGCTGCCCCGTGTCTATCTGCAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021506.6 |
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| CDS-3UTR TCA 90 bp | GGAGGCAGATACAGGGAGAGAGCAGGGGTAGGGGACAAGACAAATTTCAGGCTCACATTGGGACAAATTTaGCTCCAGTGGCAGCAGCTG | + |
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Preference number: 4 (lower is better) Translates to: GGRYRERAGVGDKTNFRLTLGQI*LQWQQL Trigger: CAGCTGCTGCCACTGGAGTCAAATTTGTCCCAATGT...GAGCCTGAAATTTGTCTTGTCCCCTACCCCTGCTCTCTCCCTGTATCTGCCTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021506.6 |
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| CDS-3UTR GCA 90 bp | CACTATCTAATCCAGGCATGCCAAGGCCAAGCAGAGCATGGAAGCCAAAATGCATCCAGTGGCAGCAGCTaGTTCTGTGCCTGTCTCAGC | + |
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Preference number: 4 (lower is better) Translates to: HYLIQACQGQAEHGSQNASSGSS*FCACLS Trigger: GCTGAGACAGGCACAGAAGCAGCTGCTGCCACTGGA...TGCATTTTGGCTTCCATGCTCTGCTTGGCCTTGGCATGCCTGGATTAGATAGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021506.6 |
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| CDS-3UTR CCA 90 bp | ACAGTTAGTCACTATCTAATCCAGGCATGCCAAGGCCAAGCAGAGCATGGAAGCAGGTGCCCAAAGCCCTaGTGGATGTCTGCCTCAGAG | + |
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Preference number: 4 (lower is better) Translates to: TVSHYLIQACQGQAEHGSRCPKP*WMSASE Trigger: CTCTGAGGCAGACATCCACCAGGGCTTTGGGCACCT...GCTTCCATGCTCTGCTTGGCCTTGGCATGCCTGGATTAGATAGTGACTAACTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021506.6 |
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| CDS-3UTR CCA 90 bp | GATAGACACGGGGCAGCAAGCTTTCCTCTTGGTCCATATGGGTTGGCCTGTAAGGTGCTGATCTGTACCTaGTCCTTTGGCTGGTTGAGC | + |
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Preference number: 4 (lower is better) Translates to: DRHGAASFPLGPYGLACKVLICT*SFGWLS Trigger: GCTCAACCAGCCAAAGGACCAGGTACAGATCAGCAC...CTTACAGGCCAACCCATATGGACCAAGAGGAAAGCTTGCTGCCCCGTGTCTATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021506.6 |
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| CDS-3UTR CCA 90 bp | AGGCATGCCAAGGCCAAGCAGAGCATGGAAGCCAAAATGCACATGGAGACCCACTGGAGATGGAGAACTTaGGCAGGTGGAGCTCATCTA | + |
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Preference number: 4 (lower is better) Translates to: RHAKAKQSMEAKMHMETHWRWRT*AGGAHL Trigger: TAGATGAGCTCCACCTGCCCAAGTTCTCCATCTCCA...GTGGGTCTCCATGTGCATTTTGGCTTCCATGCTCTGCTTGGCCTTGGCATGCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021506.6 |
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| CDS-3UTR TCA 90 bp | CACTATCTAATCCAGGCATGCCAAGGCCAAGCAGAGCATGGAAGCCAAAATGCACCTGATGCCCAGCTTTaGAAGGACATCCTCCAGGCT | + |
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Preference number: 4 (lower is better) Translates to: HYLIQACQGQAEHGSQNAPDAQL*KDILQA Trigger: AGCCTGGAGGATGTCCTTTCAAAGCTGGGCATCAGG...TGCATTTTGGCTTCCATGCTCTGCTTGGCCTTGGCATGCCTGGATTAGATAGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021506.6 |
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| CDS-3UTR GCA 90 bp | ACAGTTAGTCACTATCTAATCCAGGCATGCCAAGGCCAAGCAGAGCATGGAAGCGCCCTGGTGGATGTCTaGCTCAGAGGTCTCTGTAAG | + |
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Preference number: 4 (lower is better) Translates to: TVSHYLIQACQGQAEHGSALVDV*LRGLCK Trigger: CTTACAGAGACCTCTGAGGCAGACATCCACCAGGGC...GCTTCCATGCTCTGCTTGGCCTTGGCATGCCTGGATTAGATAGTGACTAACTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021506.6 |
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| CDS-3UTR TCA 90 bp | ACAGTTAGTCACTATCTAATCCAGGCATGCCAAGGCCAAGCAGAGCATGGAAGCATGAGCTTTTTGGCCTaGCGAGGCTGCTGGAAGTCT | + |
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Preference number: 4 (lower is better) Translates to: TVSHYLIQACQGQAEHGSMSFLA*RGCWKS Trigger: AGACTTCCAGCAGCCTCGTCAGGCCAAAAAGCTCAT...GCTTCCATGCTCTGCTTGGCCTTGGCATGCCTGGATTAGATAGTGACTAACTGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021506.6 |
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| CDS-3UTR TCA 90 bp | CACTATCTAATCCAGGCATGCCAAGGCCAAGCAGAGCATGGAAGCCAAAATGCACTGAGACCAGTTCCTTaGTCATCCCCTGGGTCTGTT | + |
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Preference number: 4 (lower is better) Translates to: HYLIQACQGQAEHGSQNALRPVP*SSPGSV Trigger: AACAGACCCAGGGGATGATCAAGGAACTGGTCTCAG...TGCATTTTGGCTTCCATGCTCTGCTTGGCCTTGGCATGCCTGGATTAGATAGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021506.6 |
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| CDS-3UTR CCA 90 bp | GCTGCAGATAGACACGGGGCAGCAAGCTTTCCTCTTGGTCCATATGGGTTGGCCCAGTTTCGCAGACATTaGGACAAATTTGACTCCAGT | + |
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Preference number: 4 (lower is better) Translates to: AADRHGAASFPLGPYGLAQFRRH*DKFDSS Trigger: ACTGGAGTCAAATTTGTCCCAATGTCTGCGAAACTG...GGCCAACCCATATGGACCAAGAGGAAAGCTTGCTGCCCCGTGTCTATCTGCAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021506.6 |
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| CDS-3UTR GCA 90 bp | ACAGTTAGTCACTATCTAATCCAGGCATGCCAAGGCCAAGCAGAGCATGGAAGCCTTGGTTCCTGTGATTaGAGACAGGTCAGCCTGTGT | + |
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Preference number: 4 (lower is better) Translates to: TVSHYLIQACQGQAEHGSLGSCD*RQVSLC Trigger: ACACAGGCTGACCTGTCTGCAATCACAGGAACCAAG...GCTTCCATGCTCTGCTTGGCCTTGGCATGCCTGGATTAGATAGTGACTAACTGT 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021506.6 |
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| CDS-3UTR CCA 90 bp | GATAGACACGGGGCAGCAAGCTTTCCTCTTGGTCCATATGGGTTGGCCTGTAAGGCTCATCTATCATCCTaGGTTTCAGAGAATTCTTCC | + |
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Preference number: 4 (lower is better) Translates to: DRHGAASFPLGPYGLACKAHLSS*VSENSS Trigger: GGAAGAATTCTCTGAAACCCAGGATGATAGATGAGC...CTTACAGGCCAACCCATATGGACCAAGAGGAAAGCTTGCTGCCCCGTGTCTATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021506.6 |
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| CDS-3UTR GCA 90 bp | TTTTGCTCCTACCTCTTTATTCTGGTTGGTGGTGTTCCTCTTTTGTGTGAGGTTTGGTCAGGTCCTCCATaGTCATCATGGGCACTATCA | + |
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Preference number: 4 (lower is better) Translates to: FCSYLFILVGGVPLLCEVWSGPP*SSWALS Trigger: TGATAGTGCCCATGATGAGCATGGAGGACCTGACCA...AACCTCACACAAAAGAGGAACACCACCAACCAGAATAAAGAGGTAGGAGCAAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021506.6 |
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| CDS GCA 90 bp | AGAAAAGCTCCTCATCTCGGAAGTAGGGTGTGGTCAGGTCCTCCATaGTCATCATGGGCACTATCACGGGCCTCCTCTTGCCCGCGTAGA | + |
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Preference number: 5 (lower is better) Translates to: RKAPHLGSRVWSGPP*SSWALSRASSCPRR Trigger: TCTACGCGGGCAAGAGGAGGCCCGTGATAGTGCCCATGATGAGCATGGAGGACCTGACCACACCCTACTTCCGAGATGAGGAGCTTTTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021506.6 |
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| CDS TCA 90 bp | TCTGTGCCTGTCTCAGCCACGTCCAGCACAGCCTTGTGGACCACCTaGGAGACTCTCAGATCCTTGGTTCCTGTGATTGCAGACAGGTCA | + |
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Preference number: 5 (lower is better) Translates to: SVPVSATSSTALWTT*ETLRSLVPVIADRS Trigger: TGACCTGTCTGCAATCACAGGAACCAAGGATCTGAGAGTCTCTCAGGTGGTCCACAAGGCTGTGCTGGACGTGGCTGAGACAGGCACAGA 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021506.6 |
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| CDS GCA 90 bp | CAGTTTCGCAGACATTGGGACAAATTTGACTCCAGTGGCAGCAGCTaGTTCTGTGCCTGTCTCAGCCACGTCCAGCACAGCCTTGTGGAC | + |
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Preference number: 5 (lower is better) Translates to: QFRRHWDKFDSSGSS*FCACLSHVQHSLVD Trigger: GTCCACAAGGCTGTGCTGGACGTGGCTGAGACAGGCACAGAAGCAGCTGCTGCCACTGGAGTCAAATTTGTCCCAATGTCTGCGAAACTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021506.6 |
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| CDS GCA 90 bp | CTGCTGGAAGTCTGCTGTGAAGGCCTCAGCCTGGTACAGAGCCCTTaGCTTCTCCTGGAATTCTGTCAGGATCTGCTGGCGCTTTTCAAT | + |
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Preference number: 5 (lower is better) Translates to: LLEVCCEGLSLVQSP*LLLEFCQDLLALFN Trigger: ATTGAAAAGCGCCAGCAGATCCTGACAGAATTCCAGGAGAAGGCAAGGGCTCTGTACCAGGCTGAGGCCTTCACAGCAGACTTCCAGCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021506.6 |
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| CDS GCA 90 bp | ATAGTCATTGATGAGCTTTTTGGCCTGACGAGGCTGCTGGAAGTCTaGTGTGAAGGCCTCAGCCTGGTACAGAGCCCTTGCCTTCTCCTG | + |
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Preference number: 5 (lower is better) Translates to: IVIDELFGLTRLLEV*CEGLSLVQSPCLLL Trigger: CAGGAGAAGGCAAGGGCTCTGTACCAGGCTGAGGCCTTCACAGCAGACTTCCAGCAGCCTCGTCAGGCCAAAAAGCTCATCAATGACTAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021506.6 |
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| CDS GCA 90 bp | CTTGTGGACCACCTGAGAGACTCTCAGATCCTTGGTTCCTGTGATTaGAGACAGGTCAGCCTGTGTGGAGAAGACTTCCCTGATGCCCAG | + |
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Preference number: 5 (lower is better) Translates to: LVDHLRDSQILGSCD*RQVSLCGEDFPDAQ Trigger: CTGGGCATCAGGGAAGTCTTCTCCACACAGGCTGACCTGTCTGCAATCACAGGAACCAAGGATCTGAGAGTCTCTCAGGTGGTCCACAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021506.6 |
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| CDS-3UTR CAA 90 bp | TACTTGATGGGGCCCAGGCTTTTGGGTGGAGGCAGATACAGGGAGAGAGCAGGGTCCAGTTGTGTCCCATaGTCATGGTCTTCTTGGACT | + |
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Preference number: 5 (lower is better) Translates to: YLMGPRLLGGGRYRERAGSSCVP*SWSSWT Trigger: AGTCCAAGAAGACCATGACAATGGGACACAACTGGA...CCCTGCTCTCTCCCTGTATCTGCCTCCACCCAAAAGCCTGGGCCCCATCAAGTA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021506.6 |
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| CDS TCA 90 bp | AGACAGGTCAGCCTGTGTGGAGAAGACTTCCCTGATGCCCAGCTTTaGAAGGACATCCTCCAGGCTGTAGTCGGTGGAGATGGAGAACTT | + |
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Preference number: 5 (lower is better) Translates to: RQVSLCGEDFPDAQL*KDILQAVVGGDGEL Trigger: AAGTTCTCCATCTCCACCGACTACAGCCTGGAGGATGTCCTTTCAAAGCTGGGCATCAGGGAAGTCTTCTCCACACAGGCTGACCTGTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021506.6 |
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| CDS CCA 90 bp | TCCTTTGGCTGGTTGAGCCTCTGTAGGAGGTGCCCAAAGCCCTGGTaGATGTCTGCCTCAGAGGTCTCTGTAAGATTGAACTTGAGACCT | + |
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Preference number: 5 (lower is better) Translates to: SFGWLSLCRRCPKPW*MSASEVSVRLNLRP Trigger: AGGTCTCAAGTTCAATCTTACAGAGACCTCTGAGGCAGACATCCACCAGGGCTTTGGGCACCTCCTACAGAGGCTCAACCAGCCAAAGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021506.6 |
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| CDS CCA 90 bp | TGGTCCTTTGGCTGGTTGAGCCTCTGTAGGAGGTGCCCAAAGCCCTaGTGGATGTCTGCCTCAGAGGTCTCTGTAAGATTGAACTTGAGA | + |
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Preference number: 5 (lower is better) Translates to: WSFGWLSLCRRCPKP*WMSASEVSVRLNLR Trigger: TCTCAAGTTCAATCTTACAGAGACCTCTGAGGCAGACATCCACCAGGGCTTTGGGCACCTCCTACAGAGGCTCAACCAGCCAAAGGACCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021506.6 |
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| CDS CCA 90 bp | TATCATCCTGGGTTTCAGAGAATTCTTCCACTTCCTCAGGGTCTCTaGTTGCAAGCTGGCTTCCACCTGCTGCATCTTGCCCTGGTCAGG | + |
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Preference number: 5 (lower is better) Translates to: YHPGFQRILPLPQGL*LQAGFHLLHLALVR Trigger: CCTGACCAGGGCAAGATGCAGCAGGTGGAAGCCAGCTTGCAACCAGAGACCCTGAGGAAGTGGAAGAATTCTCTGAAACCCAGGATGATA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021506.6 |
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| CDS CCA 90 bp | TGCCCAGCTTTGAAAGGACATCCTCCAGGCTGTAGTCGGTGGAGATaGAGAACTTGGGCAGGTGGAGCTCATCTATCATCCTGGGTTTCA | + |
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Preference number: 5 (lower is better) Translates to: CPALKGHPPGCSRWR*RTWAGGAHLSSWVS Trigger: TGAAACCCAGGATGATAGATGAGCTCCACCTGCCCAAGTTCTCCATCTCCACCGACTACAGCCTGGAGGATGTCCTTTCAAAGCTGGGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021506.6 |
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| CDS-3UTR CAA 90 bp | TACTTGATGGGGCCCAGGCTTTTGGGTGGAGGCAGATACAGGGAGAGAGCAGGGATCAGGAAAGGCCGATaGAAATATACAGTCAGAGGG | + |
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Preference number: 5 (lower is better) Translates to: YLMGPRLLGGGRYRERAGIRKGR*KYTVRG Trigger: CCCTCTGACTGTATATTTCAATCGGCCTTTCCTGAT...CCCTGCTCTCTCCCTGTATCTGCCTCCACCCAAAAGCCTGGGCCCCATCAAGTA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021506.6 |
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| CDS CCA 90 bp | TTGATGGAGGCCAATGTGAGACTGTCCAGTTGTGTCCCATTGTCATaGTCTTCTTGGACTGCAGCATCCATTCCCAACGTGCCATCTGGG | + |
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Preference number: 5 (lower is better) Translates to: LMEANVRLSSCVPLS*SSWTAASIPNVPSG Trigger: CCCAGATGGCACGTTGGGAATGGATGCTGCAGTCCAAGAAGACCATGACAATGGGACACAACTGGACAGTCTCACATTGGCCTCCATCAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021506.6 |
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| CDS CCA 90 bp | CGGTGGAGATGGAGAACTTGGGCAGGTGGAGCTCATCTATCATCCTaGGTTTCAGAGAATTCTTCCACTTCCTCAGGGTCTCTGGTTGCA | + |
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Preference number: 5 (lower is better) Translates to: RWRWRTWAGGAHLSS*VSENSSTSSGSLVA Trigger: TGCAACCAGAGACCCTGAGGAAGTGGAAGAATTCTCTGAAACCCAGGATGATAGATGAGCTCCACCTGCCCAAGTTCTCCATCTCCACCG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021506.6 |
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| CDS-3UTR CAA 90 bp | CACAGGCCCCATGCAGCTGCAGAAGTGAGGGCTCTAACTCTGTGCCAGATGTGGGAGGTCTCTGTAAGATaGAACTTGAGACCTTCTAGA | + |
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Preference number: 5 (lower is better) Translates to: HRPHAAAEVRALTLCQMWEVSVR*NLRPSR Trigger: TCTAGAAGGTCTCAAGTTCAATCTTACAGAGACCTC...CCACATCTGGCACAGAGTTAGAGCCCTCACTTCTGCAGCTGCATGGGGCCTGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021506.6 |
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| CDS-3UTR CAA 90 bp | GATAGACACGGGGCAGCAAGCTTTCCTCTTGGTCCATATGGGTTGGCCTGTAAGGACATTGGGACAAATTaGACTCCAGTGGCAGCAGCT | + |
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Preference number: 5 (lower is better) Translates to: DRHGAASFPLGPYGLACKDIGTN*TPVAAA Trigger: AGCTGCTGCCACTGGAGTCAAATTTGTCCCAATGTC...CTTACAGGCCAACCCATATGGACCAAGAGGAAAGCTTGCTGCCCCGTGTCTATC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021506.6 |
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| CDS-3UTR CAA 90 bp | TTTTGCTCCTACCTCTTTATTCTGGTTGGTGGTGTTCCTCTTTTGTGTGAGGTTCCTCAGGGTCTCTGGTaGCAAGCTGGCTTCCACCTG | + |
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Preference number: 5 (lower is better) Translates to: FCSYLFILVGGVPLLCEVPQGLW*QAGFHL Trigger: CAGGTGGAAGCCAGCTTGCAACCAGAGACCCTGAGG...AACCTCACACAAAAGAGGAACACCACCAACCAGAATAAAGAGGTAGGAGCAAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021506.6 |
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| CDS-3UTR CAA 90 bp | AGGCAGATACAGGGAGAGAGCAGGGGTAGGGGACAAGACAAATTTCAGGCTCAGTCTGTAAGATTGAACTaGAGACCTTCTAGAATCTCT | + |
|
Preference number: 5 (lower is better) Translates to: RQIQGESRGRGQDKFQAQSVRLN*RPSRIS Trigger: AGAGATTCTAGAAGGTCTCAAGTTCAATCTTACAGA...CTGAGCCTGAAATTTGTCTTGTCCCCTACCCCTGCTCTCTCCCTGTATCTGCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021506.6 |
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| CDS-3UTR CAA 90 bp | TTTGCTCCTACCTCTTTATTCTGGTTGGTGGTGTTCCTCTTTTGTGTGAGGTTGTTGGGGTTGGCTATCTaGGCTATAAAGGGGGCAATT | + |
|
Preference number: 5 (lower is better) Translates to: FAPTSLFWLVVFLFCVRLLGLAI*AIKGAI Trigger: AATTGCCCCCTTTATAGCCAAGATAGCCAACCCCAA...CAACCTCACACAAAAGAGGAACACCACCAACCAGAATAAAGAGGTAGGAGCAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000021506.6 |
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| CDS CCA 72 bp | GCACTACCCGTGCTGATCTGTACCTGGTCCTTTGGCTaGTTGAGCCTCTGTAGGAGGTGCCCAAAGCCCTGG | + |
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Preference number: 6 (lower is better) Translates to: ALPVLICTWSFG*LSLCRRCPKPW Trigger: CCAGGGCTTTGGGCACCTCCTACAGAGGCTCAACCAGCCAAAGGACCAGGTACAGATCAGCACGGGTAGTGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021506.6 |
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| CDS CAA 72 bp | CTACCCGTGCTGATCTGTACCTGGTCCTTTGGCTGGTaGAGCCTCTGTAGGAGGTGCCCAAAGCCCTGGTGG | + |
|
Preference number: 6 (lower is better) Translates to: LPVLICTWSFGW*SLCRRCPKPWW Trigger: CCACCAGGGCTTTGGGCACCTCCTACAGAGGCTCAACCAGCCAAAGGACCAGGTACAGATCAGCACGGGTAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021506.6 |
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| CDS GCA 72 bp | GTCTGCTGTGAAGGCCTCAGCCTGGTACAGAGCCCTTaGCTTCTCCTGGAATTCTGTCAGGATCTGCTGGCG | + |
|
Preference number: 6 (lower is better) Translates to: VCCEGLSLVQSP*LLLEFCQDLLA Trigger: CGCCAGCAGATCCTGACAGAATTCCAGGAGAAGGCAAGGGCTCTGTACCAGGCTGAGGCCTTCACAGCAGAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021506.6 |
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| CDS GCA 72 bp | GATGAGCTTTTTGGCCTGACGAGGCTGCTGGAAGTCTaGTGTGAAGGCCTCAGCCTGGTACAGAGCCCTTGC | + |
|
Preference number: 6 (lower is better) Translates to: DELFGLTRLLEV*CEGLSLVQSPC Trigger: GCAAGGGCTCTGTACCAGGCTGAGGCCTTCACAGCAGACTTCCAGCAGCCTCGTCAGGCCAAAAAGCTCATC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021506.6 |
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| CDS GCA 72 bp | CCTCATCTCGGAAGTAGGGTGTGGTCAGGTCCTCCATaGTCATCATGGGCACTATCACGGGCCTCCTCTTGC | + |
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Preference number: 6 (lower is better) Translates to: PHLGSRVWSGPP*SSWALSRASSC Trigger: GCAAGAGGAGGCCCGTGATAGTGCCCATGATGAGCATGGAGGACCTGACCACACCCTACTTCCGAGATGAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021506.6 |
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| CDS CCA 72 bp | CGAGGCTGCTGGAAGTCTGCTGTGAAGGCCTCAGCCTaGTACAGAGCCCTTGCCTTCTCCTGGAATTCTGTC | + |
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Preference number: 6 (lower is better) Translates to: RGCWKSAVKASA*YRALAFSWNSV Trigger: GACAGAATTCCAGGAGAAGGCAAGGGCTCTGTACCAGGCTGAGGCCTTCACAGCAGACTTCCAGCAGCCTCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021506.6 |
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| CDS GCA 72 bp | CATGGTCTTCTTGGACTGCAGCATCCATTCCCAACGTaGCATCTGGGAAGCAGAGGACAGCAGGGCAGATCC | + |
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Preference number: 6 (lower is better) Translates to: HGLLGLQHPFPT*HLGSRGQQGRS Trigger: GGATCTGCCCTGCTGTCCTCTGCTTCCCAGATGGCACGTTGGGAATGGATGCTGCAGTCCAAGAAGACCATG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021506.6 |
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| CDS CAA 90 bp | CATCCTGGGTTTCAGAGAATTCTTCCACTTCCTCAGGGTCTCTGGTaGCAAGCTGGCTTCCACCTGCTGCATCTTGCCCTGGTCAGGGAG | + |
|
Preference number: 6 (lower is better) Translates to: HPGFQRILPLPQGLW*QAGFHLLHLALVRE Trigger: CTCCCTGACCAGGGCAAGATGCAGCAGGTGGAAGCCAGCTTGCAACCAGAGACCCTGAGGAAGTGGAAGAATTCTCTGAAACCCAGGATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021506.6 |
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| CDS TCA 72 bp | TCACGGGCCTCCTCTTGCCCGCGTAGAACTCAGACTTaGACGTGTCAAGAGGGTCAAAGGGCACCTTCCATT | + |
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Preference number: 6 (lower is better) Translates to: SRASSCPRRTQT*TCQEGQRAPSI Trigger: AATGGAAGGTGCCCTTTGACCCTCTTGACACGTTCAAGTCTGAGTTCTACGCGGGCAAGAGGAGGCCCGTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021506.6 |
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| CDS GCA 72 bp | AGACATTGGGACAAATTTGACTCCAGTGGCAGCAGCTaGTTCTGTGCCTGTCTCAGCCACGTCCAGCACAGC | + |
|
Preference number: 6 (lower is better) Translates to: RHWDKFDSSGSS*FCACLSHVQHS Trigger: GCTGTGCTGGACGTGGCTGAGACAGGCACAGAAGCAGCTGCTGCCACTGGAGTCAAATTTGTCCCAATGTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021506.6 |
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| CDS TCA 72 bp | AGCCTGTGTGGAGAAGACTTCCCTGATGCCCAGCTTTaGAAGGACATCCTCCAGGCTGTAGTCGGTGGAGAT | + |
|
Preference number: 6 (lower is better) Translates to: SLCGEDFPDAQL*KDILQAVVGGD Trigger: ATCTCCACCGACTACAGCCTGGAGGATGTCCTTTCAAAGCTGGGCATCAGGGAAGTCTTCTCCACACAGGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021506.6 |
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| CDS TCA 72 bp | TTGCAGACAGGTCAGCCTGTGTGGAGAAGACTTCCCTaGTGCCCAGCTTTGAAAGGACATCCTCCAGGCTGT | + |
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Preference number: 6 (lower is better) Translates to: LQTGQPVWRRLP*CPALKGHPPGC Trigger: ACAGCCTGGAGGATGTCCTTTCAAAGCTGGGCATCAGGGAAGTCTTCTCCACACAGGCTGACCTGTCTGCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021506.6 |
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| CDS GCA 72 bp | TTCAGAGAATTCTTCCACTTCCTCAGGGTCTCTGGTTaGAAGCTGGCTTCCACCTGCTGCATCTTGCCCTGG | + |
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Preference number: 6 (lower is better) Translates to: FREFFHFLRVSG*KLASTCCILPW Trigger: CCAGGGCAAGATGCAGCAGGTGGAAGCCAGCTTGCAACCAGAGACCCTGAGGAAGTGGAAGAATTCTCTGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021506.6 |
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| CDS CCA 72 bp | TCAATAAACAGGGCACTACCCGTGCTGATCTGTACCTaGTCCTTTGGCTGGTTGAGCCTCTGTAGGAGGTGC | + |
|
Preference number: 6 (lower is better) Translates to: SINRALPVLICT*SFGWLSLCRRC Trigger: GCACCTCCTACAGAGGCTCAACCAGCCAAAGGACCAGGTACAGATCAGCACGGGTAGTGCCCTGTTTATTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021506.6 |
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| CDS CCA 72 bp | GGGTTTCAGAGAATTCTTCCACTTCCTCAGGGTCTCTaGTTGCAAGCTGGCTTCCACCTGCTGCATCTTGCC | + |
|
Preference number: 6 (lower is better) Translates to: GFQRILPLPQGL*LQAGFHLLHLA Trigger: GGCAAGATGCAGCAGGTGGAAGCCAGCTTGCAACCAGAGACCCTGAGGAAGTGGAAGAATTCTCTGAAACCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021506.6 |
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| CDS CCA 72 bp | CATCCTCCAGGCTGTAGTCGGTGGAGATGGAGAACTTaGGCAGGTGGAGCTCATCTATCATCCTGGGTTTCA | + |
|
Preference number: 6 (lower is better) Translates to: HPPGCSRWRWRT*AGGAHLSSWVS Trigger: TGAAACCCAGGATGATAGATGAGCTCCACCTGCCCAAGTTCTCCATCTCCACCGACTACAGCCTGGAGGATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021506.6 |
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| CDS CCA 72 bp | CCAGCTTTGAAAGGACATCCTCCAGGCTGTAGTCGGTaGAGATGGAGAACTTGGGCAGGTGGAGCTCATCTA | + |
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Preference number: 6 (lower is better) Translates to: PALKGHPPGCSR*RWRTWAGGAHL Trigger: TAGATGAGCTCCACCTGCCCAAGTTCTCCATCTCCACCGACTACAGCCTGGAGGATGTCCTTTCAAAGCTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021506.6 |
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| CDS GCA 72 bp | GTCCAGTTGTGTCCCATTGTCATGGTCTTCTTGGACTaGAGCATCCATTCCCAACGTGCCATCTGGGAAGCA | + |
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Preference number: 6 (lower is better) Translates to: VQLCPIVMVFLD*SIHSQRAIWEA Trigger: TGCTTCCCAGATGGCACGTTGGGAATGGATGCTGCAGTCCAAGAAGACCATGACAATGGGACACAACTGGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021506.6 |
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| CDS GCA 72 bp | AGAGCCCTTGCCTTCTCCTGGAATTCTGTCAGGATCTaGTGGCGCTTTTCAATAAACAGGGCACTACCCGTG | + |
|
Preference number: 6 (lower is better) Translates to: RALAFSWNSVRI*WRFSINRALPV Trigger: CACGGGTAGTGCCCTGTTTATTGAAAAGCGCCAGCAGATCCTGACAGAATTCCAGGAGAAGGCAAGGGCTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021506.6 |
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| CDS CCA 72 bp | AAGGCCTCAGCCTGGTACAGAGCCCTTGCCTTCTCCTaGAATTCTGTCAGGATCTGCTGGCGCTTTTCAATA | + |
|
Preference number: 6 (lower is better) Translates to: KASAWYRALAFS*NSVRICWRFSI Trigger: TATTGAAAAGCGCCAGCAGATCCTGACAGAATTCCAGGAGAAGGCAAGGGCTCTGTACCAGGCTGAGGCCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021506.6 |
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| CDS CCA 72 bp | TTGAAAGGACATCCTCCAGGCTGTAGTCGGTGGAGATaGAGAACTTGGGCAGGTGGAGCTCATCTATCATCC | + |
|
Preference number: 6 (lower is better) Translates to: LKGHPPGCSRWR*RTWAGGAHLSS Trigger: GGATGATAGATGAGCTCCACCTGCCCAAGTTCTCCATCTCCACCGACTACAGCCTGGAGGATGTCCTTTCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021506.6 |
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| CDS CAA 72 bp | GAGACTGTCCAGTTGTGTCCCATTGTCATGGTCTTCTaGGACTGCAGCATCCATTCCCAACGTGCCATCTGG | + |
|
Preference number: 6 (lower is better) Translates to: ETVQLCPIVMVF*DCSIHSQRAIW Trigger: CCAGATGGCACGTTGGGAATGGATGCTGCAGTCCAAGAAGACCATGACAATGGGACACAACTGGACAGTCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021506.6 |
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| CDS CAA 72 bp | TTTCAGAGAATTCTTCCACTTCCTCAGGGTCTCTGGTaGCAAGCTGGCTTCCACCTGCTGCATCTTGCCCTG | + |
|
Preference number: 6 (lower is better) Translates to: FQRILPLPQGLW*QAGFHLLHLAL Trigger: CAGGGCAAGATGCAGCAGGTGGAAGCCAGCTTGCAACCAGAGACCCTGAGGAAGTGGAAGAATTCTCTGAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021506.6 |
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| CDS TCA 72 bp | TCAGAGGGTACAGTTTCGCAGACATTGGGACAAATTTaGCTCCAGTGGCAGCAGCTGCTTCTGTGCCTGTCT | + |
|
Preference number: 6 (lower is better) Translates to: SEGTVSQTLGQI*LQWQQLLLCLS Trigger: AGACAGGCACAGAAGCAGCTGCTGCCACTGGAGTCAAATTTGTCCCAATGTCTGCGAAACTGTACCCTCTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021506.6 |
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| CDS CCA 72 bp | GCCAATGTGAGACTGTCCAGTTGTGTCCCATTGTCATaGTCTTCTTGGACTGCAGCATCCATTCCCAACGTG | + |
|
Preference number: 6 (lower is better) Translates to: ANVRLSSCVPLS*SSWTAASIPNV Trigger: CACGTTGGGAATGGATGCTGCAGTCCAAGAAGACCATGACAATGGGACACAACTGGACAGTCTCACATTGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021506.6 |
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| CDS CAA 72 bp | ATGGAGGCCAATGTGAGACTGTCCAGTTGTGTCCCATaGTCATGGTCTTCTTGGACTGCAGCATCCATTCCC | + |
|
Preference number: 6 (lower is better) Translates to: MEANVRLSSCVP*SWSSWTAASIP Trigger: GGGAATGGATGCTGCAGTCCAAGAAGACCATGACAATGGGACACAACTGGACAGTCTCACATTGGCCTCCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021506.6 |
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| CDS CCA 72 bp | TGGAGAACTTGGGCAGGTGGAGCTCATCTATCATCCTaGGTTTCAGAGAATTCTTCCACTTCCTCAGGGTCT | + |
|
Preference number: 6 (lower is better) Translates to: WRTWAGGAHLSS*VSENSSTSSGS Trigger: AGACCCTGAGGAAGTGGAAGAATTCTCTGAAACCCAGGATGATAGATGAGCTCCACCTGCCCAAGTTCTCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021506.6 |
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| CDS TCA 72 bp | ATTCACCAGCACCATCAATGTCCTTTTATCCAGGTCTaGGACCAGTTCCTTGATCATCCCCTGGGTCTGTTT | + |
|
Preference number: 6 (lower is better) Translates to: IHQHHQCPFIQV*DQFLDHPLGLF Trigger: AAACAGACCCAGGGGATGATCAAGGAACTGGTCTCAGACCTGGATAAAAGGACATTGATGGTGCTGGTGAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021506.6 |
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| CDS CCA 72 bp | GAAATATACAGTCAGAGGGTACAGTTTCGCAGACATTaGGACAAATTTGACTCCAGTGGCAGCAGCTGCTTC | + |
|
Preference number: 6 (lower is better) Translates to: EIYSQRVQFRRH*DKFDSSGSSCF Trigger: GAAGCAGCTGCTGCCACTGGAGTCAAATTTGTCCCAATGTCTGCGAAACTGTACCCTCTGACTGTATATTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021506.6 |
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| CDS TCA 72 bp | TCAATGTCCTTTTATCCAGGTCTGAGACCAGTTCCTTaGTCATCCCCTGGGTCTGTTTCCTCACATAGTCAT | + |
|
Preference number: 6 (lower is better) Translates to: SMSFYPGLRPVP*SSPGSVSSHSH Trigger: ATGACTATGTGAGGAAACAGACCCAGGGGATGATCAAGGAACTGGTCTCAGACCTGGATAAAAGGACATTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021506.6 |
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| CDS TCA 72 bp | TTTCTGTGTCAAAGATCATTATCAGGAAAGGCCGATTaGAATATACAGTCAGAGGGTACAGTTTCGCAGACA | + |
|
Preference number: 6 (lower is better) Translates to: FLCQRSLSGKAD*NIQSEGTVSQT Trigger: TGTCTGCGAAACTGTACCCTCTGACTGTATATTTCAATCGGCCTTTCCTGATAATGATCTTTGACACAGAAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021506.6 |
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