Pregenerated sensors for SERPINA3M (Mus musculus)
Ensembl gene IDs: ENSMUSG00000079012Ensembl transcript IDs: ENSMUST00000101078.12, ENSMUST00000168797.2
Found 73 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TGTCACTGTCTAAGCCATCTTTGCATCAGCCAATCAAAGCATGATTaGCAGGATGTAAACAGAGATCCACATGCGGACTCCATCCTAGGG | + |
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Preference number: 1 (lower is better) Translates to: CHCLSHLCISQSKHD*QDVNRDPHADSILG Trigger: CCCTAGGATGGAGTCCGCATGTGGATCTCTGTTTACATCCTGGCAATCATGCTTTGATTGGCTGATGCAAAGATGGCTTAGACAGTGACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000101078.12 ENSMUST00000168797.2 |
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| 3UTR GCA 90 bp | TGTGGGAGCCACAGAGATAGTCAATGTCACTGTCTAAGCCATCTTTaGATCAGCCAATCAAAGCATGATTGCCAGGATGTAAACAGAGAT | + |
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Preference number: 1 (lower is better) Translates to: CGSHRDSQCHCLSHL*ISQSKHDCQDVNRD Trigger: ATCTCTGTTTACATCCTGGCAATCATGCTTTGATTGGCTGATGCAAAGATGGCTTAGACAGTGACATTGACTATCTCTGTGGCTCCCACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000101078.12 ENSMUST00000168797.2 |
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| 3UTR-3UTR CCA 90 bp | CCTGAGCGCCTGACACTGACAGTCCAAAGGCTCCTGAGCATGTGGGAGCCACAGTCCATCCTAGGGTCCTaGGCAGAATATTCAGAACTT | + |
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Preference number: 2 (lower is better) Translates to: PERLTLTVQRLLSMWEPQSILGS*AEYSEL Trigger: AAGTTCTGAATATTCTGCCCAGGACCCTAGGATGGA...CTGTGGCTCCCACATGCTCAGGAGCCTTTGGACTGTCAGTGTCAGGCGCTCAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000101078.12 ENSMUST00000168797.2 |
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| 3UTR-3UTR GCA 90 bp | GACAGTCCAAAGGCTCCTGAGCATGTGGGAGCCACAGAGATAGTCAATGTCACTAAACAGAGATCCACATaGGGACTCCATCCTAGGGTC | + |
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Preference number: 2 (lower is better) Translates to: DSPKAPEHVGATEIVNVTKQRST*GLHPRV Trigger: GACCCTAGGATGGAGTCCGCATGTGGATCTCTGTTT...AGTGACATTGACTATCTCTGTGGCTCCCACATGCTCAGGAGCCTTTGGACTGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000101078.12 ENSMUST00000168797.2 |
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| 3UTR-3UTR GCA 90 bp | GAGCGCCTGACACTGACAGTCCAAAGGCTCCTGAGCATGTGGGAGCCACAGAGACAATCAAAGCATGATTaGCAGGATGTAAACAGAGAT | + |
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Preference number: 2 (lower is better) Translates to: ERLTLTVQRLLSMWEPQRQSKHD*QDVNRD Trigger: ATCTCTGTTTACATCCTGGCAATCATGCTTTGATTG...TCTCTGTGGCTCCCACATGCTCAGGAGCCTTTGGACTGTCAGTGTCAGGCGCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000101078.12 ENSMUST00000168797.2 |
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| 3UTR-3UTR GCA 90 bp | CCAGGTTCAGAAACATGCACAGATGCTCCCAAGAGGCCTGAGCGCCTGACACTGCAATCAAAGCATGATTaGCAGGATGTAAACAGAGAT | + |
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Preference number: 2 (lower is better) Translates to: PGSETCTDAPKRPERLTLQSKHD*QDVNRD Trigger: ATCTCTGTTTACATCCTGGCAATCATGCTTTGATTG...CAGTGTCAGGCGCTCAGGCCTCTTGGGAGCATCTGTGCATGTTTCTGAACCTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000101078.12 ENSMUST00000168797.2 |
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| 3UTR-3UTR TCA 90 bp | GTGTATTTGCCAATGCCTAGTTTTGGGATACAGATATATAAAAAGGAGTCACCATGCTCCCAAGAGGCCTaGGCGCCTGACACTGACAGT | + |
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Preference number: 2 (lower is better) Translates to: VYLPMPSFGIQIYKKESPCSQEA*APDTDS Trigger: ACTGTCAGTGTCAGGCGCTCAGGCCTCTTGGGAGCA...TGGTGACTCCTTTTTATATATCTGTATCCCAAAACTAGGCATTGGCAAATACAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000101078.12 ENSMUST00000168797.2 |
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| 3UTR-3UTR TCA 90 bp | TGGAACTCTGTGTATTTGCCAATGCCTAGTTTTGGGATACAGATATATAAAAAGCAGTCCAAAGGCTCCTaGGCATGTGGGAGCCACAGA | + |
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Preference number: 2 (lower is better) Translates to: WNSVYLPMPSFGIQIYKKQSKGS*ACGSHR Trigger: TCTGTGGCTCCCACATGCTCAGGAGCCTTTGGACTG...CTTTTTATATATCTGTATCCCAAAACTAGGCATTGGCAAATACACAGAGTTCCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000101078.12 ENSMUST00000168797.2 |
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| 3UTR-3UTR CCA 90 bp | CACTGTCTAAGCCATCTTTGCATCAGCCAATCAAAGCATGATTGCCAGGATGTATCCATCCTAGGGTCCTaGGCAGAATATTCAGAACTT | + |
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Preference number: 2 (lower is better) Translates to: HCLSHLCISQSKHDCQDVSILGS*AEYSEL Trigger: AAGTTCTGAATATTCTGCCCAGGACCCTAGGATGGA...TACATCCTGGCAATCATGCTTTGATTGGCTGATGCAAAGATGGCTTAGACAGTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000101078.12 ENSMUST00000168797.2 |
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| 3UTR-3UTR GCA 90 bp | TGGAACTCTGTGTATTTGCCAATGCCTAGTTTTGGGATACAGATATATAAAAAGAAACAGAGATCCACATaGGGACTCCATCCTAGGGTC | + |
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Preference number: 2 (lower is better) Translates to: WNSVYLPMPSFGIQIYKKKQRST*GLHPRV Trigger: GACCCTAGGATGGAGTCCGCATGTGGATCTCTGTTT...CTTTTTATATATCTGTATCCCAAAACTAGGCATTGGCAAATACACAGAGTTCCA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000101078.12 ENSMUST00000168797.2 |
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| 3UTR TCA 72 bp | AGGTTCAGAAACATGCACAGATGCTCCCAAGAGGCCTaGGCGCCTGACACTGACAGTCCAAAGGCTCCTGAG | + |
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Preference number: 3 (lower is better) Translates to: RFRNMHRCSQEA*APDTDSPKAPE Trigger: CTCAGGAGCCTTTGGACTGTCAGTGTCAGGCGCTCAGGCCTCTTGGGAGCATCTGTGCATGTTTCTGAACCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000101078.12 ENSMUST00000168797.2 |
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| 3UTR GCA 72 bp | CTAAGCCATCTTTGCATCAGCCAATCAAAGCATGATTaGCAGGATGTAAACAGAGATCCACATGCGGACTCC | + |
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Preference number: 3 (lower is better) Translates to: LSHLCISQSKHD*QDVNRDPHADS Trigger: GGAGTCCGCATGTGGATCTCTGTTTACATCCTGGCAATCATGCTTTGATTGGCTGATGCAAAGATGGCTTAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000101078.12 ENSMUST00000168797.2 |
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| 3UTR-3UTR CAA 90 bp | ATAAAAAGGAGTCACCAGGGAAGAGGAATAAAGACAGACTCCAGGTTCAGAAACCTGTCTAAGCCATCTTaGCATCAGCCAATCAAAGCA | + |
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Preference number: 3 (lower is better) Translates to: IKRSHQGRGIKTDSRFRNLSKPS*HQPIKA Trigger: TGCTTTGATTGGCTGATGCAAAGATGGCTTAGACAG...GTTTCTGAACCTGGAGTCTGTCTTTATTCCTCTTCCCTGGTGACTCCTTTTTAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000101078.12 ENSMUST00000168797.2 |
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| 3UTR-3UTR CAA 90 bp | AGCCTGTATTGGAACTCTGTGTATTTGCCAATGCCTAGTTTTGGGATACAGATACTGTCTAAGCCATCTTaGCATCAGCCAATCAAAGCA | + |
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Preference number: 3 (lower is better) Translates to: SLYWNSVYLPMPSFGIQILSKPS*HQPIKA Trigger: TGCTTTGATTGGCTGATGCAAAGATGGCTTAGACAG...TATCTGTATCCCAAAACTAGGCATTGGCAAATACACAGAGTTCCAATACAGGCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000101078.12 ENSMUST00000168797.2 |
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| CDS-3UTR TCA 90 bp | GAGCGCCTGACACTGACAGTCCAAAGGCTCCTGAGCATGTGGGAGCCACAGAGAGGTCTTCTGGCTGGCTaGGCCTCTGTAGGAGGTGCC | + |
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Preference number: 4 (lower is better) Translates to: ERLTLTVQRLLSMWEPQRGLLAG*ASVGGA Trigger: GGCACCTCCTACAGAGGCTCAGCCAGCCAGAAGACC...TCTCTGTGGCTCCCACATGCTCAGGAGCCTTTGGACTGTCAGTGTCAGGCGCTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000101078.12 ENSMUST00000168797.2 |
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| CDS-3UTR TCA 90 bp | CCAGGTTCAGAAACATGCACAGATGCTCCCAAGAGGCCTGAGCGCCTGACACTGGGTCTTCTGGCTGGCTaGGCCTCTGTAGGAGGTGCC | + |
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Preference number: 4 (lower is better) Translates to: PGSETCTDAPKRPERLTLGLLAG*ASVGGA Trigger: GGCACCTCCTACAGAGGCTCAGCCAGCCAGAAGACC...CAGTGTCAGGCGCTCAGGCCTCTTGGGAGCATCTGTGCATGTTTCTGAACCTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000101078.12 ENSMUST00000168797.2 |
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| CDS-3UTR CCA 90 bp | CCTGAGCGCCTGACACTGACAGTCCAAAGGCTCCTGAGCATGTGGGAGCCACAGTGCTGCATCCTGCCCTaGTCAGGGAGGATGAACAGG | + |
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Preference number: 4 (lower is better) Translates to: PERLTLTVQRLLSMWEPQCCILP*SGRMNR Trigger: CCTGTTCATCCTCCCTGACCAGGGCAGGATGCAGCA...CTGTGGCTCCCACATGCTCAGGAGCCTTTGGACTGTCAGTGTCAGGCGCTCAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000101078.12 ENSMUST00000168797.2 |
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| CDS-3UTR GCA 90 bp | CCAGGTTCAGAAACATGCACAGATGCTCCCAAGAGGCCTGAGCGCCTGACACTGGTGGCCTCAGTAGGCTaGTGGAAGTCTGCTGTGAAG | + |
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Preference number: 4 (lower is better) Translates to: PGSETCTDAPKRPERLTLVASVG*WKSAVK Trigger: CTTCACAGCAGACTTCCAGCAGCCTACTGAGGCCAC...CAGTGTCAGGCGCTCAGGCCTCTTGGGAGCATCTGTGCATGTTTCTGAACCTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000101078.12 ENSMUST00000168797.2 |
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| CDS-3UTR TCA 90 bp | CCAGGTTCAGAAACATGCACAGATGCTCCCAAGAGGCCTGAGCGCCTGACACTGCACCTGTGTGAGAGATaGCCATCAGGAATGGCCTGT | + |
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Preference number: 4 (lower is better) Translates to: PGSETCTDAPKRPERLTLHLCER*PSGMAC Trigger: ACAGGCCATTCCTGATGGTCATCTCTCACACAGGTG...CAGTGTCAGGCGCTCAGGCCTCTTGGGAGCATCTGTGCATGTTTCTGAACCTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000101078.12 ENSMUST00000168797.2 |
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| CDS-3UTR CCA 90 bp | CCTGACACTGACAGTCCAAAGGCTCCTGAGCATGTGGGAGCCACAGAGATAGTCAGGTGCCCAAAGCCCTaGTGGATGTCTGCTTCAGAG | + |
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Preference number: 4 (lower is better) Translates to: PDTDSPKAPEHVGATEIVRCPKP*WMSASE Trigger: CTCTGAAGCAGACATCCACCAGGGCTTTGGGCACCT...GACTATCTCTGTGGCTCCCACATGCTCAGGAGCCTTTGGACTGTCAGTGTCAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000101078.12 ENSMUST00000168797.2 |
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| CDS-3UTR CCA 90 bp | GAGCGCCTGACACTGACAGTCCAAAGGCTCCTGAGCATGTGGGAGCCACAGAGAGATGACCATCAGGAATaGCCTGTTGAACTGCACAGT | + |
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Preference number: 4 (lower is better) Translates to: ERLTLTVQRLLSMWEPQRDDHQE*PVELHS Trigger: ACTGTGCAGTTCAACAGGCCATTCCTGATGGTCATC...TCTCTGTGGCTCCCACATGCTCAGGAGCCTTTGGACTGTCAGTGTCAGGCGCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000101078.12 ENSMUST00000168797.2 |
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| CDS-3UTR CCA 90 bp | GAGCGCCTGACACTGACAGTCCAAAGGCTCCTGAGCATGTGGGAGCCACAGAGATGTGAGACTGTCATCTaGTGTCCCACTTTCTTGGTT | + |
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Preference number: 4 (lower is better) Translates to: ERLTLTVQRLLSMWEPQRCETVI*CPTFLV Trigger: AACCAAGAAAGTGGGACACCAGATGACAGTCTCACA...TCTCTGTGGCTCCCACATGCTCAGGAGCCTTTGGACTGTCAGTGTCAGGCGCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000101078.12 ENSMUST00000168797.2 |
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| CDS-3UTR CCA 90 bp | GACAGTCCAAAGGCTCCTGAGCATGTGGGAGCCACAGAGATAGTCAATGTCACTAGGTGCCCAAAGCCCTaGTGGATGTCTGCTTCAGAG | + |
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Preference number: 4 (lower is better) Translates to: DSPKAPEHVGATEIVNVTRCPKP*WMSASE Trigger: CTCTGAAGCAGACATCCACCAGGGCTTTGGGCACCT...AGTGACATTGACTATCTCTGTGGCTCCCACATGCTCAGGAGCCTTTGGACTGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000101078.12 ENSMUST00000168797.2 |
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| CDS-3UTR CCA 90 bp | CCAGGTTCAGAAACATGCACAGATGCTCCCAAGAGGCCTGAGCGCCTGACACTGGATGACCATCAGGAATaGCCTGTTGAACTGCACAGT | + |
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Preference number: 4 (lower is better) Translates to: PGSETCTDAPKRPERLTLDDHQE*PVELHS Trigger: ACTGTGCAGTTCAACAGGCCATTCCTGATGGTCATC...CAGTGTCAGGCGCTCAGGCCTCTTGGGAGCATCTGTGCATGTTTCTGAACCTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000101078.12 ENSMUST00000168797.2 |
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| CDS-3UTR TCA 90 bp | GACAGTCCAAAGGCTCCTGAGCATGTGGGAGCCACAGAGATAGTCAATGTCACTTCCCCATGTGTCATCTaGGAAGCAGAGGACAGTAGG | + |
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Preference number: 4 (lower is better) Translates to: DSPKAPEHVGATEIVNVTSPCVI*EAEDSR Trigger: CCTACTGTCCTCTGCTTCTCAGATGACACATGGGGA...AGTGACATTGACTATCTCTGTGGCTCCCACATGCTCAGGAGCCTTTGGACTGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000101078.12 ENSMUST00000168797.2 |
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| CDS-3UTR GCA 90 bp | CCTGAGCGCCTGACACTGACAGTCCAAAGGCTCCTGAGCATGTGGGAGCCACAGAATGGCCTGTTGAACTaGACAGTCATAGTTTGTAAT | + |
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Preference number: 4 (lower is better) Translates to: PERLTLTVQRLLSMWEPQNGLLN*TVIVCN Trigger: ATTACAAACTATGACTGTGCAGTTCAACAGGCCATT...CTGTGGCTCCCACATGCTCAGGAGCCTTTGGACTGTCAGTGTCAGGCGCTCAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000101078.12 ENSMUST00000168797.2 |
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| CDS-3UTR CCA 90 bp | CCTGACACTGACAGTCCAAAGGCTCCTGAGCATGTGGGAGCCACAGAGATAGTCCACGGAAGTGGCGTGTaGTCAGAAACTTCATTTTCA | + |
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Preference number: 4 (lower is better) Translates to: PDTDSPKAPEHVGATEIVHGSGV*SETSFS Trigger: TGAAAATGAAGTTTCTGACCACACGCCACTTCCGTG...GACTATCTCTGTGGCTCCCACATGCTCAGGAGCCTTTGGACTGTCAGTGTCAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000101078.12 ENSMUST00000168797.2 |
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| CDS-3UTR CCA 90 bp | GAGCGCCTGACACTGACAGTCCAAAGGCTCCTGAGCATGTGGGAGCCACAGAGAGCTCACCTATTTTCCTaGTTTTCAAAGATTTCCACC | + |
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Preference number: 4 (lower is better) Translates to: ERLTLTVQRLLSMWEPQRAHLFS*FSKIST Trigger: GGTGGAAATCTTTGAAAACCAGGAAAATAGGTGAGC...TCTCTGTGGCTCCCACATGCTCAGGAGCCTTTGGACTGTCAGTGTCAGGCGCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000101078.12 ENSMUST00000168797.2 |
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| CDS-3UTR GCA 90 bp | AAAAAGGAGTCACCAGGGAAGAGGAATAAAGACAGACTCCAGGTTCAGAAACATCAGCAGCTGCTTCTGTaGCTGTCTCAGCCACGTCCA | + |
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Preference number: 4 (lower is better) Translates to: KKESPGKRNKDRLQVQKHQQLLL*LSQPRP Trigger: TGGACGTGGCTGAGACAGGCACAGAAGCAGCTGCTG...ATGTTTCTGAACCTGGAGTCTGTCTTTATTCCTCTTCCCTGGTGACTCCTTTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000101078.12 ENSMUST00000168797.2 |
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| CDS-3UTR TCA 90 bp | CACTGTCTAAGCCATCTTTGCATCAGCCAATCAAAGCATGATTGCCAGGATGTACACCTGTGTGAGAGATaGCCATCAGGAATGGCCTGT | + |
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Preference number: 4 (lower is better) Translates to: HCLSHLCISQSKHDCQDVHLCER*PSGMAC Trigger: ACAGGCCATTCCTGATGGTCATCTCTCACACAGGTG...TACATCCTGGCAATCATGCTTTGATTGGCTGATGCAAAGATGGCTTAGACAGTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000101078.12 ENSMUST00000168797.2 |
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| CDS-3UTR GCA 90 bp | AGCCTGTATTGGAACTCTGTGTATTTGCCAATGCCTAGTTTTGGGATACAGATAAAGCTGGCTTCCACCTaGTGCATCCTGCCCTGGTCA | + |
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Preference number: 4 (lower is better) Translates to: SLYWNSVYLPMPSFGIQIKLAST*CILPWS Trigger: TGACCAGGGCAGGATGCAGCAGGTGGAAGCCAGCTT...TATCTGTATCCCAAAACTAGGCATTGGCAAATACACAGAGTTCCAATACAGGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000101078.12 ENSMUST00000168797.2 |
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| CDS-3UTR TCA 90 bp | AAAAAGGAGTCACCAGGGAAGAGGAATAAAGACAGACTCCAGGTTCAGAAACATGGTCCTTGGTTCCTGTaGTCCCAGATAGGTCAGCTT | + |
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Preference number: 4 (lower is better) Translates to: KKESPGKRNKDRLQVQKHGPWFL*SQIGQL Trigger: AAGCTGACCTATCTGGGATCACAGGAACCAAGGACC...ATGTTTCTGAACCTGGAGTCTGTCTTTATTCCTCTTCCCTGGTGACTCCTTTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000101078.12 ENSMUST00000168797.2 |
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| CDS-3UTR GCA 90 bp | TGGAACTCTGTGTATTTGCCAATGCCTAGTTTTGGGATACAGATATATAAAAAGCAGGGTGTTGCCCTTTaGTCCCAGGGACACGAGGGC | + |
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Preference number: 4 (lower is better) Translates to: WNSVYLPMPSFGIQIYKKQGVAL*SQGHEG Trigger: GCCCTCGTGTCCCTGGGAGCAAAGGGCAACACCCTG...CTTTTTATATATCTGTATCCCAAAACTAGGCATTGGCAAATACACAGAGTTCCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000101078.12 ENSMUST00000168797.2 |
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| CDS-3UTR GCA 90 bp | AACTCTGTGTATTTGCCAATGCCTAGTTTTGGGATACAGATATATAAAAAGGAGCAGGGTGTTGCCCTTTaGTCCCAGGGACACGAGGGC | + |
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Preference number: 4 (lower is better) Translates to: NSVYLPMPSFGIQIYKKEQGVAL*SQGHEG Trigger: GCCCTCGTGTCCCTGGGAGCAAAGGGCAACACCCTG...CTCCTTTTTATATATCTGTATCCCAAAACTAGGCATTGGCAAATACACAGAGTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000101078.12 ENSMUST00000168797.2 |
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| CDS-3UTR TCA 90 bp | AAAAAGGAGTCACCAGGGAAGAGGAATAAAGACAGACTCCAGGTTCAGAAACATAACGAAAGCCAAAAATaGACCCTGTGGCAGCAGCTG | + |
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Preference number: 4 (lower is better) Translates to: KKESPGKRNKDRLQVQKHNESQK*TLWQQL Trigger: CAGCTGCTGCCACAGGGTTCATTTTTGGCTTTCGTT...ATGTTTCTGAACCTGGAGTCTGTCTTTATTCCTCTTCCCTGGTGACTCCTTTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000101078.12 ENSMUST00000168797.2 |
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| CDS-3UTR GCA 90 bp | GGAACTCTGTGTATTTGCCAATGCCTAGTTTTGGGATACAGATATATAAAAAGGCAGCAGCTGCTTCTGTaGCTGTCTCAGCCACGTCCA | + |
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Preference number: 4 (lower is better) Translates to: GTLCICQCLVLGYRYIKRQQLLL*LSQPRP Trigger: TGGACGTGGCTGAGACAGGCACAGAAGCAGCTGCTG...CCTTTTTATATATCTGTATCCCAAAACTAGGCATTGGCAAATACACAGAGTTCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000101078.12 ENSMUST00000168797.2 |
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| CDS-3UTR GCA 90 bp | GGAACTCTGTGTATTTGCCAATGCCTAGTTTTGGGATACAGATATATAAAAAGGGCCCTGGTGGATGTCTaGTTCAGAGGTCTCTGTGAG | + |
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Preference number: 4 (lower is better) Translates to: GTLCICQCLVLGYRYIKRALVDV*FRGLCE Trigger: CTCACAGAGACCTCTGAAGCAGACATCCACCAGGGC...CCTTTTTATATATCTGTATCCCAAAACTAGGCATTGGCAAATACACAGAGTTCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000101078.12 ENSMUST00000168797.2 |
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| CDS-3UTR GCA 90 bp | TGGAACTCTGTGTATTTGCCAATGCCTAGTTTTGGGATACAGATATATAAAAAGAAGCTGGCTTCCACCTaGTGCATCCTGCCCTGGTCA | + |
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Preference number: 4 (lower is better) Translates to: WNSVYLPMPSFGIQIYKKKLAST*CILPWS Trigger: TGACCAGGGCAGGATGCAGCAGGTGGAAGCCAGCTT...CTTTTTATATATCTGTATCCCAAAACTAGGCATTGGCAAATACACAGAGTTCCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000101078.12 ENSMUST00000168797.2 |
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| CDS-3UTR CCA 90 bp | AACTCTGTGTATTTGCCAATGCCTAGTTTTGGGATACAGATATATAAAAAGGAGTGCTGCATCCTGCCCTaGTCAGGGAGGATGAACAGG | + |
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Preference number: 4 (lower is better) Translates to: NSVYLPMPSFGIQIYKKECCILP*SGRMNR Trigger: CCTGTTCATCCTCCCTGACCAGGGCAGGATGCAGCA...CTCCTTTTTATATATCTGTATCCCAAAACTAGGCATTGGCAAATACACAGAGTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000101078.12 ENSMUST00000168797.2 |
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| CDS-3UTR CCA 90 bp | CACTGTCTAAGCCATCTTTGCATCAGCCAATCAAAGCATGATTGCCAGGATGTATTTAATGCCCAGCTCTaGAAGGATGTCCTTCAGGTT | + |
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Preference number: 4 (lower is better) Translates to: HCLSHLCISQSKHDCQDVFNAQL*KDVLQV Trigger: AACCTGAAGGACATCCTTCCAGAGCTGGGCATTAAA...TACATCCTGGCAATCATGCTTTGATTGGCTGATGCAAAGATGGCTTAGACAGTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000101078.12 ENSMUST00000168797.2 |
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| CDS-3UTR GCA 90 bp | TGGAACTCTGTGTATTTGCCAATGCCTAGTTTTGGGATACAGATATATAAAAAGGCCCTGGTGGATGTCTaGTTCAGAGGTCTCTGTGAG | + |
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Preference number: 4 (lower is better) Translates to: WNSVYLPMPSFGIQIYKKALVDV*FRGLCE Trigger: CTCACAGAGACCTCTGAAGCAGACATCCACCAGGGC...CTTTTTATATATCTGTATCCCAAAACTAGGCATTGGCAAATACACAGAGTTCCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000101078.12 ENSMUST00000168797.2 |
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| CDS-3UTR CCA 90 bp | AAAAAGGAGTCACCAGGGAAGAGGAATAAAGACAGACTCCAGGTTCAGAAACATTTTAATGCCCAGCTCTaGAAGGATGTCCTTCAGGTT | + |
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Preference number: 4 (lower is better) Translates to: KKESPGKRNKDRLQVQKHFNAQL*KDVLQV Trigger: AACCTGAAGGACATCCTTCCAGAGCTGGGCATTAAA...ATGTTTCTGAACCTGGAGTCTGTCTTTATTCCTCTTCCCTGGTGACTCCTTTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000101078.12 ENSMUST00000168797.2 |
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| CDS-3UTR TCA 90 bp | AACTCTGTGTATTTGCCAATGCCTAGTTTTGGGATACAGATATATAAAAAGGAGTCCCCATGTGTCATCTaGGAAGCAGAGGACAGTAGG | + |
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Preference number: 4 (lower is better) Translates to: NSVYLPMPSFGIQIYKKESPCVI*EAEDSR Trigger: CCTACTGTCCTCTGCTTCTCAGATGACACATGGGGA...CTCCTTTTTATATATCTGTATCCCAAAACTAGGCATTGGCAAATACACAGAGTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000101078.12 ENSMUST00000168797.2 |
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| CDS-3UTR TCA 90 bp | TGGAACTCTGTGTATTTGCCAATGCCTAGTTTTGGGATACAGATATATAAAAAGAACGAAAGCCAAAAATaGACCCTGTGGCAGCAGCTG | + |
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Preference number: 4 (lower is better) Translates to: WNSVYLPMPSFGIQIYKKNESQK*TLWQQL Trigger: CAGCTGCTGCCACAGGGTTCATTTTTGGCTTTCGTT...CTTTTTATATATCTGTATCCCAAAACTAGGCATTGGCAAATACACAGAGTTCCA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000101078.12 ENSMUST00000168797.2 |
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| CDS-3UTR CCA 90 bp | AGCCTGTATTGGAACTCTGTGTATTTGCCAATGCCTAGTTTTGGGATACAGATAGCTCACCTATTTTCCTaGTTTTCAAAGATTTCCACC | + |
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Preference number: 4 (lower is better) Translates to: SLYWNSVYLPMPSFGIQIAHLFS*FSKIST Trigger: GGTGGAAATCTTTGAAAACCAGGAAAATAGGTGAGC...TATCTGTATCCCAAAACTAGGCATTGGCAAATACACAGAGTTCCAATACAGGCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000101078.12 ENSMUST00000168797.2 |
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| CDS-3UTR CCA 90 bp | AACTCTGTGTATTTGCCAATGCCTAGTTTTGGGATACAGATATATAAAAAGGAGTGTGAGACTGTCATCTaGTGTCCCACTTTCTTGGTT | + |
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Preference number: 4 (lower is better) Translates to: NSVYLPMPSFGIQIYKKECETVI*CPTFLV Trigger: AACCAAGAAAGTGGGACACCAGATGACAGTCTCACA...CTCCTTTTTATATATCTGTATCCCAAAACTAGGCATTGGCAAATACACAGAGTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000101078.12 ENSMUST00000168797.2 |
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| 3UTR CAA 72 bp | TGTATTGGAACTCTGTGTATTTGCCAATGCCTAGTTTaGGGATACAGATATATAAAAAGGAGTCACCAGGGA | + |
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Preference number: 4 (lower is better) Translates to: CIGTLCICQCLV*GYRYIKRSHQG Trigger: TCCCTGGTGACTCCTTTTTATATATCTGTATCCCAAAACTAGGCATTGGCAAATACACAGAGTTCCAATACA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000101078.12 ENSMUST00000168797.2 |
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| CDS-3UTR GCA 90 bp | GTGTATTTGCCAATGCCTAGTTTTGGGATACAGATATATAAAAAGGAGTCACCAAATGGCCTGTTGAACTaGACAGTCATAGTTTGTAAT | + |
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Preference number: 4 (lower is better) Translates to: VYLPMPSFGIQIYKKESPNGLLN*TVIVCN Trigger: ATTACAAACTATGACTGTGCAGTTCAACAGGCCATT...TGGTGACTCCTTTTTATATATCTGTATCCCAAAACTAGGCATTGGCAAATACAC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000101078.12 ENSMUST00000168797.2 |
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| CDS TCA 90 bp | TCTGTGCCTGTCTCAGCCACGTCCAGCACAGCCTTGTGGACCACCTaGGACACACTCAGGTCCTTGGTTCCTGTGATCCCAGATAGGTCA | + |
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Preference number: 5 (lower is better) Translates to: SVPVSATSSTALWTT*DTLRSLVPVIPDRS Trigger: TGACCTATCTGGGATCACAGGAACCAAGGACCTGAGTGTGTCTCAGGTGGTCCACAAGGCTGTGCTGGACGTGGCTGAGACAGGCACAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000101078.12 ENSMUST00000168797.2 |
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| CDS CCA 90 bp | GTGGCCTCAGTAGGCTGCTGGAAGTCTGCTGTGAAGGCCTCAGTCTaGTACAGAGCCCTTGTCTTCTCATGGAATTCTGCCAGGATCTGC | + |
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Preference number: 5 (lower is better) Translates to: VASVGCWKSAVKASV*YRALVFSWNSARIC Trigger: GCAGATCCTGGCAGAATTCCATGAGAAGACAAGGGCTCTGTACCAGACTGAGGCCTTCACAGCAGACTTCCAGCAGCCTACTGAGGCCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000101078.12 ENSMUST00000168797.2 |
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| CDS CCA 90 bp | TCTTCTGGCTGGCTGAGCCTCTGTAGGAGGTGCCCAAAGCCCTGGTaGATGTCTGCTTCAGAGGTCTCTGTGAGATTGAACTTGAGACCT | + |
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Preference number: 5 (lower is better) Translates to: SSGWLSLCRRCPKPW*MSASEVSVRLNLRP Trigger: AGGTCTCAAGTTCAATCTCACAGAGACCTCTGAAGCAGACATCCACCAGGGCTTTGGGCACCTCCTACAGAGGCTCAGCCAGCCAGAAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000101078.12 ENSMUST00000168797.2 |
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| CDS CCA 90 bp | TGGTCTTCTGGCTGGCTGAGCCTCTGTAGGAGGTGCCCAAAGCCCTaGTGGATGTCTGCTTCAGAGGTCTCTGTGAGATTGAACTTGAGA | + |
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Preference number: 5 (lower is better) Translates to: WSSGWLSLCRRCPKP*WMSASEVSVRLNLR Trigger: TCTCAAGTTCAATCTCACAGAGACCTCTGAAGCAGACATCCACCAGGGCTTTGGGCACCTCCTACAGAGGCTCAGCCAGCCAGAAGACCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000101078.12 ENSMUST00000168797.2 |
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| CDS TCA 90 bp | ACATGGCATTGCCTATGTTTATCTGATCCTGGTCTTCTGGCTGGCTaGGCCTCTGTAGGAGGTGCCCAAAGCCCTGGTGGATGTCTGCTT | + |
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Preference number: 5 (lower is better) Translates to: TWHCLCLSDPGLLAG*ASVGGAQSPGGCLL Trigger: AAGCAGACATCCACCAGGGCTTTGGGCACCTCCTACAGAGGCTCAGCCAGCCAGAAGACCAGGATCAGATAAACATAGGCAATGCCATGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000101078.12 ENSMUST00000168797.2 |
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| CDS CCA 90 bp | GCTCCAACACAGAGCAGGACAGCTCCTCATCACGGAAGTGGCGTGTaGTCAGAAACTTCATTTTCATCATGGGAACCTTCACAGATCTCT | + |
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Preference number: 5 (lower is better) Translates to: APTQSRTAPHHGSGV*SETSFSSWEPSQIS Trigger: AGAGATCTGTGAAGGTTCCCATGATGAAAATGAAGTTTCTGACCACACGCCACTTCCGTGATGAGGAGCTGTCCTGCTCTGTGTTGGAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000101078.12 ENSMUST00000168797.2 |
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| CDS-3UTR CAA 90 bp | CCTGACACTGACAGTCCAAAGGCTCCTGAGCATGTGGGAGCCACAGAGATAGTCGAGGTCTCTGTGAGATaGAACTTGAGACCTTCTAAA | + |
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Preference number: 5 (lower is better) Translates to: PDTDSPKAPEHVGATEIVEVSVR*NLRPSK Trigger: TTTAGAAGGTCTCAAGTTCAATCTCACAGAGACCTC...GACTATCTCTGTGGCTCCCACATGCTCAGGAGCCTTTGGACTGTCAGTGTCAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000101078.12 ENSMUST00000168797.2 |
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| CDS-3UTR CAA 90 bp | GACAGTCCAAAGGCTCCTGAGCATGTGGGAGCCACAGAGATAGTCAATGTCACTGAGGTCTCTGTGAGATaGAACTTGAGACCTTCTAAA | + |
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Preference number: 5 (lower is better) Translates to: DSPKAPEHVGATEIVNVTEVSVR*NLRPSK Trigger: TTTAGAAGGTCTCAAGTTCAATCTCACAGAGACCTC...AGTGACATTGACTATCTCTGTGGCTCCCACATGCTCAGGAGCCTTTGGACTGTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000101078.12 ENSMUST00000168797.2 |
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| CDS-3UTR CAA 90 bp | CACTGTCTAAGCCATCTTTGCATCAGCCAATCAAAGCATGATTGCCAGGATGTATTCAAAGCCATCTTCTaGTACAGGCTGAAGGCAAAG | + |
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Preference number: 5 (lower is better) Translates to: HCLSHLCISQSKHDCQDVFKAIF*YRLKAK Trigger: CTTTGCCTTCAGCCTGTACAAGAAGATGGCTTTGAA...TACATCCTGGCAATCATGCTTTGATTGGCTGATGCAAAGATGGCTTAGACAGTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000101078.12 ENSMUST00000168797.2 |
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| CDS-3UTR CAA 90 bp | ATAAAAAGGAGTCACCAGGGAAGAGGAATAAAGACAGACTCCAGGTTCAGAAACTTGGGGTTAGTGACTTaGGCCATAAAGAGGGTAGTC | + |
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Preference number: 5 (lower is better) Translates to: IKRSHQGRGIKTDSRFRNLGLVT*AIKRVV Trigger: GACTACCCTCTTTATGGCCAAAGTCACTAACCCCAA...GTTTCTGAACCTGGAGTCTGTCTTTATTCCTCTTCCCTGGTGACTCCTTTTTAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000101078.12 ENSMUST00000168797.2 |
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| CDS-3UTR CAA 90 bp | AGCCTGTATTGGAACTCTGTGTATTTGCCAATGCCTAGTTTTGGGATACAGATATTCAAAGCCATCTTCTaGTACAGGCTGAAGGCAAAG | + |
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Preference number: 5 (lower is better) Translates to: SLYWNSVYLPMPSFGIQIFKAIF*YRLKAK Trigger: CTTTGCCTTCAGCCTGTACAAGAAGATGGCTTTGAA...TATCTGTATCCCAAAACTAGGCATTGGCAAATACACAGAGTTCCAATACAGGCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000101078.12 ENSMUST00000168797.2 |
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| CDS-3UTR CAA 90 bp | TGGAACTCTGTGTATTTGCCAATGCCTAGTTTTGGGATACAGATATATAAAAAGTTGGGGTTAGTGACTTaGGCCATAAAGAGGGTAGTC | + |
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Preference number: 5 (lower is better) Translates to: WNSVYLPMPSFGIQIYKKLGLVT*AIKRVV Trigger: GACTACCCTCTTTATGGCCAAAGTCACTAACCCCAA...CTTTTTATATATCTGTATCCCAAAACTAGGCATTGGCAAATACACAGAGTTCCA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000101078.12 ENSMUST00000168797.2 |
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| CDS-3UTR CAA 90 bp | TGGAACTCTGTGTATTTGCCAATGCCTAGTTTTGGGATACAGATATATAAAAAGATCAGGAATGGCCTGTaGAACTGCACAGTCATAGTT | + |
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Preference number: 5 (lower is better) Translates to: WNSVYLPMPSFGIQIYKKIRNGL*NCTVIV Trigger: AACTATGACTGTGCAGTTCAACAGGCCATTCCTGAT...CTTTTTATATATCTGTATCCCAAAACTAGGCATTGGCAAATACACAGAGTTCCA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000101078.12 ENSMUST00000168797.2 |
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| CDS GCA 72 bp | TCCTGGTCTTCTGGCTGGCTGAGCCTCTGTAGGAGGTaGCCAAAGCCCTGGTGGATGTCTGCTTCAGAGGTC | + |
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Preference number: 6 (lower is better) Translates to: SWSSGWLSLCRR*PKPWWMSASEV Trigger: GACCTCTGAAGCAGACATCCACCAGGGCTTTGGGCACCTCCTACAGAGGCTCAGCCAGCCAGAAGACCAGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000101078.12 ENSMUST00000168797.2 |
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| CDS GCA 72 bp | GATGAGCTTTGTGGCCTCAGTAGGCTGCTGGAAGTCTaGTGTGAAGGCCTCAGTCTGGTACAGAGCCCTTGT | + |
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Preference number: 6 (lower is better) Translates to: DELCGLSRLLEV*CEGLSLVQSPC Trigger: ACAAGGGCTCTGTACCAGACTGAGGCCTTCACAGCAGACTTCCAGCAGCCTACTGAGGCCACAAAGCTCATC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000101078.12 ENSMUST00000168797.2 |
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| CDS CCA 72 bp | ATTTCCACCATTTCCTCAGGGTCTCTGGTTGTAAGCTaGCTTCCACCTGCTGCATCCTGCCCTGGTCAGGGA | + |
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Preference number: 6 (lower is better) Translates to: ISTISSGSLVVS*LPPAASCPGQG Trigger: TCCCTGACCAGGGCAGGATGCAGCAGGTGGAAGCCAGCTTACAACCAGAGACCCTGAGGAAATGGTGGAAAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000101078.12 ENSMUST00000168797.2 |
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| CDS TCA 72 bp | GGACCACCTGAGACACACTCAGGTCCTTGGTTCCTGTaGTCCCAGATAGGTCAGCTTGTTTGGAGAAGATTT | + |
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Preference number: 6 (lower is better) Translates to: GPPETHSGPWFL*SQIGQLVWRRF Trigger: AAATCTTCTCCAAACAAGCTGACCTATCTGGGATCACAGGAACCAAGGACCTGAGTGTGTCTCAGGTGGTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000101078.12 ENSMUST00000168797.2 |
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| CDS CCA 72 bp | CAGAGCAGGACAGCTCCTCATCACGGAAGTGGCGTGTaGTCAGAAACTTCATTTTCATCATGGGAACCTTCA | + |
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Preference number: 6 (lower is better) Translates to: QSRTAPHHGSGV*SETSFSSWEPS Trigger: TGAAGGTTCCCATGATGAAAATGAAGTTTCTGACCACACGCCACTTCCGTGATGAGGAGCTGTCCTGCTCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000101078.12 ENSMUST00000168797.2 |
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| CDS CAA 72 bp | GCCATCTTCTTGTACAGGCTGAAGGCAAAGTCAGTGTaGATGGACGCCAATGTGAGACTGTCATCTGGTGTC | + |
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Preference number: 6 (lower is better) Translates to: AIFLYRLKAKSV*MDANVRLSSGV Trigger: GACACCAGATGACAGTCTCACATTGGCGTCCATCAACACTGACTTTGCCTTCAGCCTGTACAAGAAGATGGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000101078.12 ENSMUST00000168797.2 |
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| CDS CCA 72 bp | AAGGCCTCAGTCTGGTACAGAGCCCTTGTCTTCTCATaGAATTCTGCCAGGATCTGCAGGTCCTTTTCAATA | + |
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Preference number: 6 (lower is better) Translates to: KASVWYRALVFS*NSARICRSFSI Trigger: TATTGAAAAGGACCTGCAGATCCTGGCAGAATTCCATGAGAAGACAAGGGCTCTGTACCAGACTGAGGCCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000101078.12 ENSMUST00000168797.2 |
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| CDS CAA 90 bp | ACACTCAGGTCCTTGGTTCCTGTGATCCCAGATAGGTCAGCTTGTTaGGAGAAGATTTCTTTAATGCCCAGCTCTGGAAGGATGTCCTTC | + |
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Preference number: 6 (lower is better) Translates to: TLRSLVPVIPDRSAC*EKISLMPSSGRMSF Trigger: GAAGGACATCCTTCCAGAGCTGGGCATTAAAGAAATCTTCTCCAAACAAGCTGACCTATCTGGGATCACAGGAACCAAGGACCTGAGTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000101078.12 ENSMUST00000168797.2 |
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| CDS CAA 90 bp | TTCTTCAAAGCCATCTTCTTGTACAGGCTGAAGGCAAAGTCAGTGTaGATGGACGCCAATGTGAGACTGTCATCTGGTGTCCCACTTTCT | + |
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Preference number: 6 (lower is better) Translates to: FFKAIFLYRLKAKSV*MDANVRLSSGVPLS Trigger: AGAAAGTGGGACACCAGATGACAGTCTCACATTGGCGTCCATCAACACTGACTTTGCCTTCAGCCTGTACAAGAAGATGGCTTTGAAGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000101078.12 ENSMUST00000168797.2 |
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| CDS CAA 72 bp | TGGATGTCTGCTTCAGAGGTCTCTGTGAGATTGAACTaGAGACCTTCTAAAATCTCTTCCAGGGTGTTGCCC | + |
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Preference number: 6 (lower is better) Translates to: WMSASEVSVRLN*RPSKISSRVLP Trigger: GGGCAACACCCTGGAAGAGATTTTAGAAGGTCTCAAGTTCAATCTCACAGAGACCTCTGAAGCAGACATCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000101078.12 ENSMUST00000168797.2 |
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| CDS TCA 72 bp | TCAATGTCCTATCATCCAGTTCTGAGATCAGTTTCTTaGTCATCCCCTGGGTCTGATTGCTCACATAGTCAT | + |
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Preference number: 6 (lower is better) Translates to: SMSYHPVLRSVS*SSPGSDCSHSH Trigger: ATGACTATGTGAGCAATCAGACCCAGGGGATGATCAAGAAACTGATCTCAGAACTGGATGATAGGACATTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000101078.12 ENSMUST00000168797.2 |
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| CDS CCA 72 bp | AGCTTGTTTGGAGAAGATTTCTTTAATGCCCAGCTCTaGAAGGATGTCCTTCAGGTTGTAGTCAGTAGAGAT | + |
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Preference number: 6 (lower is better) Translates to: SLFGEDFFNAQL*KDVLQVVVSRD Trigger: ATCTCTACTGACTACAACCTGAAGGACATCCTTCCAGAGCTGGGCATTAAAGAAATCTTCTCCAAACAAGCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000101078.12 ENSMUST00000168797.2 |
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