Pregenerated sensors for SERPINA3K (Mus musculus)
Ensembl gene IDs: ENSMUSG00000058207Ensembl transcript IDs: ENSMUST00000043058.5
Found 87 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AAGAAGAGCTGGTCTGACCCTCAGTCCCATGCAGCTGCAGGAGTTTaGGTTCTAACTGTGCCAGATGTAGGCAGGCTCAGGGGACCCTGC | + |
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Preference number: 1 (lower is better) Translates to: KKSWSDPQSHAAAGV*VLTVPDVGRLRGPC Trigger: GCAGGGTCCCCTGAGCCTGCCTACATCTGGCACAGTTAGAACCCAAACTCCTGCAGCTGCATGGGACTGAGGGTCAGACCAGCTCTTCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043058.5 |
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| 3UTR TCA 90 bp | ACTGTGCCAGATGTAGGCAGGCTCAGGGGACCCTGCATGGGGCACTaGGTGGCAAAGCCTGCAGAGGGAAAGCATAACCTTGAGAAAGCA | + |
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Preference number: 1 (lower is better) Translates to: TVPDVGRLRGPCMGH*VAKPAEGKHNLEKA Trigger: TGCTTTCTCAAGGTTATGCTTTCCCTCTGCAGGCTTTGCCACTCAGTGCCCCATGCAGGGTCCCCTGAGCCTGCCTACATCTGGCACAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043058.5 |
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| 3UTR TCA 90 bp | ATAACCTTGAGAAAGCATGGCACCAGGCCTTCTCAGATGCTGGAATaGCATTCAGAGCAACAGGTTCCCCTCTCAGTCCTGGGCCTGATT | + |
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Preference number: 1 (lower is better) Translates to: ITLRKHGTRPSQMLE*HSEQQVPLSVLGLI Trigger: AATCAGGCCCAGGACTGAGAGGGGAACCTGTTGCTCTGAATGTCATTCCAGCATCTGAGAAGGCCTGGTGCCATGCTTTCTCAAGGTTAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043058.5 |
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| 3UTR GCA 90 bp | GGAAGAAGAATAAAGGCAGATTCCAGGTTCAGAAATATGCACAGATaGTCCCAAGAGGCCCAAGAGCCCGACACTGAGAGTCCAAAGTCT | + |
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Preference number: 1 (lower is better) Translates to: GRRIKADSRFRNMHR*SQEAQEPDTESPKS Trigger: AGACTTTGGACTCTCAGTGTCGGGCTCTTGGGCCTCTTGGGAGCATCTGTGCATATTTCTGAACCTGGAATCTGCCTTTATTCTTCTTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043058.5 |
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| 3UTR GCA 90 bp | GTGCAAGCAGATGTGCTCAAAGTTGGTATTGGAACTCTGTGTATTTaGCAATGCCTAGGTTTGGGGTACAGACACATAAAGAGGAGTCAC | + |
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Preference number: 1 (lower is better) Translates to: VQADVLKVGIGTLCI*QCLGLGYRHIKRSH Trigger: GTGACTCCTCTTTATGTGTCTGTACCCCAAACCTAGGCATTGGCAAATACACAGAGTTCCAATACCAACTTTGAGCACATCTGCTTGCAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043058.5 |
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| 3UTR CCA 90 bp | TGGTCCCATCAAGATTGTGCAAGCAGATGTGCTCAAAGTTGGTATTaGAACTCTGTGTATTTGCCAATGCCTAGGTTTGGGGTACAGACA | + |
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Preference number: 1 (lower is better) Translates to: WSHQDCASRCAQSWY*NSVYLPMPRFGVQT Trigger: TGTCTGTACCCCAAACCTAGGCATTGGCAAATACACAGAGTTCCAATACCAACTTTGAGCACATCTGCTTGCACAATCTTGATGGGACCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043058.5 |
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| 3UTR-3UTR TCA 90 bp | CAGGCTCAGGGGACCCTGCATGGGGCACTGAGTGGCAAAGCCTGCAGAGGGAAATCTCAGTCCTGGGCCTaGTTCTCAAGGGTTAGCCCA | + |
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Preference number: 2 (lower is better) Translates to: QAQGTLHGALSGKACRGKSQSWA*FSRVSP Trigger: TGGGCTAACCCTTGAGAATCAGGCCCAGGACTGAGA...TTTCCCTCTGCAGGCTTTGCCACTCAGTGCCCCATGCAGGGTCCCCTGAGCCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043058.5 |
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| 3UTR-3UTR TCA 90 bp | CAGGCTCAGGGGACCCTGCATGGGGCACTGAGTGGCAAAGCCTGCAGAGGGAAACCAAGAGCCCGACACTaGGAGTCCAAAGTCTTATGT | + |
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Preference number: 2 (lower is better) Translates to: QAQGTLHGALSGKACRGKPRARH*ESKVLC Trigger: ACATAAGACTTTGGACTCTCAGTGTCGGGCTCTTGG...TTTCCCTCTGCAGGCTTTGCCACTCAGTGCCCCATGCAGGGTCCCCTGAGCCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043058.5 |
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| 3UTR-3UTR CCA 90 bp | CAGGCTCAGGGGACCCTGCATGGGGCACTGAGTGGCAAAGCCTGCAGAGGGAAATGTCTAAGCCAACTTTaGAACAGCCAATCAGAGCTT | + |
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Preference number: 2 (lower is better) Translates to: QAQGTLHGALSGKACRGKCLSQL*NSQSEL Trigger: AAGCTCTGATTGGCTGTTCCAAAGTTGGCTTAGACA...TTTCCCTCTGCAGGCTTTGCCACTCAGTGCCCCATGCAGGGTCCCCTGAGCCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043058.5 |
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| 3UTR-3UTR GCA 90 bp | CTGCAGAGGGAAAGCATAACCTTGAGAAAGCATGGCACCAGGCCTTCTCAGATGCCAGGTTCAGAAATATaGACAGATGCTCCCAAGAGG | + |
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Preference number: 2 (lower is better) Translates to: LQRESITLRKHGTRPSQMPGSEI*TDAPKR Trigger: CCTCTTGGGAGCATCTGTGCATATTTCTGAACCTGG...CATCTGAGAAGGCCTGGTGCCATGCTTTCTCAAGGTTATGCTTTCCCTCTGCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043058.5 |
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| 3UTR CCA 72 bp | AGAGTGGCTGAGGTGGAGTGCCAGGGGAAGAAGAGCTaGTCTGACCCTCAGTCCCATGCAGCTGCAGGAGTT | + |
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Preference number: 3 (lower is better) Translates to: RVAEVECQGKKS*SDPQSHAAAGV Trigger: AACTCCTGCAGCTGCATGGGACTGAGGGTCAGACCAGCTCTTCTTCCCCTGGCACTCCACCTCAGCCACTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043058.5 |
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| 3UTR TCA 72 bp | GATGTAGGCAGGCTCAGGGGACCCTGCATGGGGCACTaGGTGGCAAAGCCTGCAGAGGGAAAGCATAACCTT | + |
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Preference number: 3 (lower is better) Translates to: DVGRLRGPCMGH*VAKPAEGKHNL Trigger: AAGGTTATGCTTTCCCTCTGCAGGCTTTGCCACTCAGTGCCCCATGCAGGGTCCCCTGAGCCTGCCTACATC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043058.5 |
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| 3UTR-3UTR CAA 90 bp | GAGGTGGAGTGCCAGGGGAAGAAGAGCTGGTCTGACCCTCAGTCCCATGCAGCTAGGGAAAGCATAACCTaGAGAAAGCATGGCACCAGG | + |
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Preference number: 3 (lower is better) Translates to: EVECQGKKSWSDPQSHAARESIT*RKHGTR Trigger: CCTGGTGCCATGCTTTCTCAAGGTTATGCTTTCCCT...AGCTGCATGGGACTGAGGGTCAGACCAGCTCTTCTTCCCCTGGCACTCCACCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043058.5 |
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| 3UTR CCA 72 bp | TGGTCTGACCCTCAGTCCCATGCAGCTGCAGGAGTTTaGGTTCTAACTGTGCCAGATGTAGGCAGGCTCAGG | + |
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Preference number: 3 (lower is better) Translates to: WSDPQSHAAAGV*VLTVPDVGRLR Trigger: CCTGAGCCTGCCTACATCTGGCACAGTTAGAACCCAAACTCCTGCAGCTGCATGGGACTGAGGGTCAGACCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043058.5 |
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| 3UTR CCA 72 bp | GGGCCTGATTCTCAAGGGTTAGCCCAGAGGCCAGCATaGTCCCATCAAGATTGTGCAAGCAGATGTGCTCAA | + |
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Preference number: 3 (lower is better) Translates to: GPDSQGLAQRPA*SHQDCASRCAQ Trigger: TTGAGCACATCTGCTTGCACAATCTTGATGGGACCATGCTGGCCTCTGGGCTAACCCTTGAGAATCAGGCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043058.5 |
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| 3UTR TCA 72 bp | AGAAAGCATGGCACCAGGCCTTCTCAGATGCTGGAATaGCATTCAGAGCAACAGGTTCCCCTCTCAGTCCTG | + |
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Preference number: 3 (lower is better) Translates to: RKHGTRPSQMLE*HSEQQVPLSVL Trigger: CAGGACTGAGAGGGGAACCTGTTGCTCTGAATGTCATTCCAGCATCTGAGAAGGCCTGGTGCCATGCTTTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043058.5 |
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| 3UTR-3UTR CAA 90 bp | AGGTGGAGTGCCAGGGGAAGAAGAGCTGGTCTGACCCTCAGTCCCATGCAGCTGACAGCCAATCAGAGCTaGAATGACAGGATGTATATA | + |
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Preference number: 3 (lower is better) Translates to: RWSARGRRAGLTLSPMQLTANQS*NDRMYI Trigger: TATATACATCCTGTCATTCAAGCTCTGATTGGCTGT...CAGCTGCATGGGACTGAGGGTCAGACCAGCTCTTCTTCCCCTGGCACTCCACCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043058.5 |
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| 3UTR GCA 72 bp | ATAAAGGCAGATTCCAGGTTCAGAAATATGCACAGATaGTCCCAAGAGGCCCAAGAGCCCGACACTGAGAGT | + |
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Preference number: 3 (lower is better) Translates to: IKADSRFRNMHR*SQEAQEPDTES Trigger: ACTCTCAGTGTCGGGCTCTTGGGCCTCTTGGGAGCATCTGTGCATATTTCTGAACCTGGAATCTGCCTTTAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043058.5 |
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| 3UTR GCA 72 bp | GTTAGCCCAGAGGCCAGCATGGTCCCATCAAGATTGTaGAAGCAGATGTGCTCAAAGTTGGTATTGGAACTC | + |
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Preference number: 3 (lower is better) Translates to: VSPEASMVPSRL*KQMCSKLVLEL Trigger: GAGTTCCAATACCAACTTTGAGCACATCTGCTTGCACAATCTTGATGGGACCATGCTGGCCTCTGGGCTAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043058.5 |
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| 3UTR CCA 72 bp | AAGCCTGCAGAGGGAAAGCATAACCTTGAGAAAGCATaGCACCAGGCCTTCTCAGATGCTGGAATGACATTC | + |
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Preference number: 3 (lower is better) Translates to: KPAEGKHNLEKA*HQAFSDAGMTF Trigger: GAATGTCATTCCAGCATCTGAGAAGGCCTGGTGCCATGCTTTCTCAAGGTTATGCTTTCCCTCTGCAGGCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043058.5 |
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| 3UTR-3UTR CAA 90 bp | GCATGGGGCACTGAGTGGCAAAGCCTGCAGAGGGAAAGCATAACCTTGAGAAAGCAGATGTGCTCAAAGTaGGTATTGGAACTCTGTGTA | + |
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Preference number: 3 (lower is better) Translates to: AWGTEWQSLQRESITLRKQMCSK*VLELCV Trigger: TACACAGAGTTCCAATACCAACTTTGAGCACATCTG...CTTTCTCAAGGTTATGCTTTCCCTCTGCAGGCTTTGCCACTCAGTGCCCCATGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043058.5 |
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| 3UTR GCA 72 bp | CCCAAGAGCCCGACACTGAGAGTCCAAAGTCTTATGTaGATGTGGGATCACAGAGATAGTCAATGTAGCTGT | + |
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Preference number: 3 (lower is better) Translates to: PKSPTLRVQSLM*MWDHRDSQCSC Trigger: ACAGCTACATTGACTATCTCTGTGATCCCACATGCACATAAGACTTTGGACTCTCAGTGTCGGGCTCTTGGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043058.5 |
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| 3UTR CCA 72 bp | AGCCCGACACTGAGAGTCCAAAGTCTTATGTGCATGTaGGATCACAGAGATAGTCAATGTAGCTGTCTAAGC | + |
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Preference number: 3 (lower is better) Translates to: SPTLRVQSLMCM*DHRDSQCSCLS Trigger: GCTTAGACAGCTACATTGACTATCTCTGTGATCCCACATGCACATAAGACTTTGGACTCTCAGTGTCGGGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043058.5 |
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| 3UTR CCA 72 bp | CAAGATTGTGCAAGCAGATGTGCTCAAAGTTGGTATTaGAACTCTGTGTATTTGCCAATGCCTAGGTTTGGG | + |
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Preference number: 3 (lower is better) Translates to: QDCASRCAQSWY*NSVYLPMPRFG Trigger: CCCAAACCTAGGCATTGGCAAATACACAGAGTTCCAATACCAACTTTGAGCACATCTGCTTGCACAATCTTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043058.5 |
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| 3UTR CCA 72 bp | TCCCATCAAGATTGTGCAAGCAGATGTGCTCAAAGTTaGTATTGGAACTCTGTGTATTTGCCAATGCCTAGG | + |
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Preference number: 3 (lower is better) Translates to: SHQDCASRCAQS*YWNSVYLPMPR Trigger: CCTAGGCATTGGCAAATACACAGAGTTCCAATACCAACTTTGAGCACATCTGCTTGCACAATCTTGATGGGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043058.5 |
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| 3UTR GCA 72 bp | GATGTGCTCAAAGTTGGTATTGGAACTCTGTGTATTTaGCAATGCCTAGGTTTGGGGTACAGACACATAAAG | + |
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Preference number: 3 (lower is better) Translates to: DVLKVGIGTLCI*QCLGLGYRHIK Trigger: CTTTATGTGTCTGTACCCCAAACCTAGGCATTGGCAAATACACAGAGTTCCAATACCAACTTTGAGCACATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043058.5 |
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| 3UTR TCA 72 bp | CTAAGCCAACTTTGGAACAGCCAATCAGAGCTTGAATaGCAGGATGTATATAGAGATCCATATGCAGACTCT | + |
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Preference number: 3 (lower is better) Translates to: LSQLWNSQSELE*QDVYRDPYADS Trigger: AGAGTCTGCATATGGATCTCTATATACATCCTGTCATTCAAGCTCTGATTGGCTGTTCCAAAGTTGGCTTAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043058.5 |
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| CDS-3UTR GCA 90 bp | TGGAGTGCCAGGGGAAGAAGAGCTGGTCTGACCCTCAGTCCCATGCAGCTGCAGCTGGCTTCCACCTGCTaGATCCTGCCTTGGTCAGGG | + |
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Preference number: 4 (lower is better) Translates to: WSARGRRAGLTLSPMQLQLASTC*ILPWSG Trigger: CCCTGACCAAGGCAGGATGCAGCAGGTGGAAGCCAG...CTGCAGCTGCATGGGACTGAGGGTCAGACCAGCTCTTCTTCCCCTGGCACTCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043058.5 |
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| CDS-3UTR GCA 90 bp | GAGGTGGAGTGCCAGGGGAAGAAGAGCTGGTCTGACCCTCAGTCCCATGCAGCTGCCCTGGTGGATGTCTaGTTCAGGGGTCTCTGTGAG | + |
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Preference number: 4 (lower is better) Translates to: EVECQGKKSWSDPQSHAAALVDV*FRGLCE Trigger: CTCACAGAGACCCCTGAAGCAGACATCCACCAGGGC...AGCTGCATGGGACTGAGGGTCAGACCAGCTCTTCTTCCCCTGGCACTCCACCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043058.5 |
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| CDS-3UTR GCA 90 bp | GGCTCAGGGGACCCTGCATGGGGCACTGAGTGGCAAAGCCTGCAGAGGGAAAGCGACTCTGTAGGAGGTTaGCAAAGCCCTGGTGGATGT | + |
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Preference number: 4 (lower is better) Translates to: GSGDPAWGTEWQSLQRESDSVGG*QSPGGC Trigger: ACATCCACCAGGGCTTTGGCAACCTCCTACAGAGTC...GCTTTCCCTCTGCAGGCTTTGCCACTCAGTGCCCCATGCAGGGTCCCCTGAGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043058.5 |
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| CDS-3UTR GCA 90 bp | GGCTCAGGGGACCCTGCATGGGGCACTGAGTGGCAAAGCCTGCAGAGGGAAAGCTTGGCCTCAGTAGGCTaGTGGAAGTCTGCTGTGAAG | + |
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Preference number: 4 (lower is better) Translates to: GSGDPAWGTEWQSLQRESLASVG*WKSAVK Trigger: CTTCACAGCAGACTTCCAGCAGCCTACTGAGGCCAA...GCTTTCCCTCTGCAGGCTTTGCCACTCAGTGCCCCATGCAGGGTCCCCTGAGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043058.5 |
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| CDS-3UTR GCA 90 bp | AGGTGGAGTGCCAGGGGAAGAAGAGCTGGTCTGACCCTCAGTCCCATGCAGCTGAAGCTGGCTTCCACCTaGTGCATCCTGCCTTGGTCA | + |
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Preference number: 4 (lower is better) Translates to: RWSARGRRAGLTLSPMQLKLAST*CILPWS Trigger: TGACCAAGGCAGGATGCAGCAGGTGGAAGCCAGCTT...CAGCTGCATGGGACTGAGGGTCAGACCAGCTCTTCTTCCCCTGGCACTCCACCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043058.5 |
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| CDS-3UTR GCA 90 bp | GATGCTGGAATGACATTCAGAGCAACAGGTTCCCCTCTCAGTCCTGGGCCTGATCCCTGTGGCAGCAGCTaGTTCTGTGCCTGTCTCAGC | + |
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Preference number: 4 (lower is better) Translates to: DAGMTFRATGSPLSPGPDPCGSS*FCACLS Trigger: GCTGAGACAGGCACAGAAGCAGCTGCTGCCACAGGG...ATCAGGCCCAGGACTGAGAGGGGAACCTGTTGCTCTGAATGTCATTCCAGCATC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043058.5 |
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| CDS-3UTR CCA 90 bp | TGGAGTGCCAGGGGAAGAAGAGCTGGTCTGACCCTCAGTCCCATGCAGCTGCAGGCCCTTGTCTTCTCATaGAATTCTGCCAGGATCTGC | + |
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Preference number: 4 (lower is better) Translates to: WSARGRRAGLTLSPMQLQALVFS*NSARIC Trigger: GCAGATCCTGGCAGAATTCCATGAGAAGACAAGGGC...CTGCAGCTGCATGGGACTGAGGGTCAGACCAGCTCTTCTTCCCCTGGCACTCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043058.5 |
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| CDS-3UTR CCA 90 bp | TGTGCCAGATGTAGGCAGGCTCAGGGGACCCTGCATGGGGCACTGAGTGGCAAAGATAACAATCAGGAATaGCCTGTTGAAACACACAGC | + |
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Preference number: 4 (lower is better) Translates to: CARCRQAQGTLHGALSGKDNNQE*PVETHS Trigger: GCTGTGTGTTTCAACAGGCCATTCCTGATTGTTATC...TTTGCCACTCAGTGCCCCATGCAGGGTCCCCTGAGCCTGCCTACATCTGGCACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043058.5 |
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| 3UTR CAA 72 bp | ACTGAGTGGCAAAGCCTGCAGAGGGAAAGCATAACCTaGAGAAAGCATGGCACCAGGCCTTCTCAGATGCTG | + |
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Preference number: 4 (lower is better) Translates to: TEWQSLQRESIT*RKHGTRPSQML Trigger: CAGCATCTGAGAAGGCCTGGTGCCATGCTTTCTCAAGGTTATGCTTTCCCTCTGCAGGCTTTGCCACTCAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043058.5 |
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| CDS-3UTR CCA 90 bp | GTGGAGTGCCAGGGGAAGAAGAGCTGGTCTGACCCTCAGTCCCATGCAGCTGCATGTGTCCCATTGTCTTaGTGTTCATGGAATACAATG | + |
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Preference number: 4 (lower is better) Translates to: VECQGKKSWSDPQSHAAACVPLS*CSWNTM Trigger: CATTGTATTCCATGAACACCAAGACAATGGGACACA...TGCAGCTGCATGGGACTGAGGGTCAGACCAGCTCTTCTTCCCCTGGCACTCCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043058.5 |
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| CDS-3UTR CCA 90 bp | GAGATCCATATGCAGACTCTGTCCCAGAGCCCTGGACAGAATCATGAGAACTTGTTGCCAAAGCCCTGGTaGATGTCTGCTTCAGGGGTC | + |
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Preference number: 4 (lower is better) Translates to: EIHMQTLSQSPGQNHENLLPKPW*MSASGV Trigger: GACCCCTGAAGCAGACATCCACCAGGGCTTTGGCAA...CAAGTTCTCATGATTCTGTCCAGGGCTCTGGGACAGAGTCTGCATATGGATCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043058.5 |
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| CDS-3UTR TCA 90 bp | GCATGGGGCACTGAGTGGCAAAGCCTGCAGAGGGAAAGCATAACCTTGAGAAAGTTGCCTATGTTTATCTaGTCCTGGTCTTCTGGCTGG | + |
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Preference number: 4 (lower is better) Translates to: AWGTEWQSLQRESITLRKLPMFI*SWSSGW Trigger: CCAGCCAGAAGACCAGGATCAGATAAACATAGGCAA...CTTTCTCAAGGTTATGCTTTCCCTCTGCAGGCTTTGCCACTCAGTGCCCCATGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043058.5 |
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| CDS-3UTR CCA 90 bp | CCAATGCCTAGGTTTGGGGTACAGACACATAAAGAGGAGTCACCAGGGAAGAAGGTGAAGGCCTCAGTCTaGTACAGAGCCCTTGTCTTC | + |
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Preference number: 4 (lower is better) Translates to: PMPRFGVQTHKEESPGKKVKASV*YRALVF Trigger: GAAGACAAGGGCTCTGTACCAGACTGAGGCCTTCAC...CTTCTTCCCTGGTGACTCCTCTTTATGTGTCTGTACCCCAAACCTAGGCATTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043058.5 |
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| CDS-3UTR GCA 90 bp | CTGCAGAGGGAAAGCATAACCTTGAGAAAGCATGGCACCAGGCCTTCTCAGATGCTTCTCATGGAATTCTaGCAGGATCTGCAGGTCCTT | + |
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Preference number: 4 (lower is better) Translates to: LQRESITLRKHGTRPSQMLLMEF*QDLQVL Trigger: AAGGACCTGCAGATCCTGGCAGAATTCCATGAGAAG...CATCTGAGAAGGCCTGGTGCCATGCTTTCTCAAGGTTATGCTTTCCCTCTGCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043058.5 |
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| CDS-3UTR TCA 90 bp | GTAATGTTTATCGATCCTTTCCTCCTGTCTCCTATTTTGGTTGGTGGTGTTCATCTTGGTCAGGGAGGATaGGCAGGGCACTGGCATTTC | + |
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Preference number: 4 (lower is better) Translates to: VMFIDPFLLSPILVGGVHLGQGG*AGHWHF Trigger: GAAATGCCAGTGCCCTGCTCATCCTCCCTGACCAAG...ATGAACACCACCAACCAAAATAGGAGACAGGAGGAAAGGATCGATAAACATTAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043058.5 |
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| CDS-3UTR GCA 90 bp | CCAATGCCTAGGTTTGGGGTACAGACACATAAAGAGGAGTCACCAGGGAAGAAGTGTCCATTTCCTTTGTaGCATCTGGGAAGCATAGGA | + |
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Preference number: 4 (lower is better) Translates to: PMPRFGVQTHKEESPGKKCPFPL*HLGSIG Trigger: TCCTATGCTTCCCAGATGGCACAAAGGAAATGGACA...CTTCTTCCCTGGTGACTCCTCTTTATGTGTCTGTACCCCAAACCTAGGCATTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043058.5 |
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| CDS-3UTR TCA 90 bp | AATAAAGGCAGATTCCAGGTTCAGAAATATGCACAGATGCTCCCAAGAGGCCCACTGAGATCAGTTTCTTaGTCATCCCCTGGGTCTGAT | + |
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Preference number: 4 (lower is better) Translates to: NKGRFQVQKYAQMLPRGPLRSVS*SSPGSD Trigger: ATCAGACCCAGGGGATGATCAAGAAACTGATCTCAG...TGGGCCTCTTGGGAGCATCTGTGCATATTTCTGAACCTGGAATCTGCCTTTATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043058.5 |
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| CDS-3UTR GCA 90 bp | CATAAAGAGGAGTCACCAGGGAAGAAGAATAAAGGCAGATTCCAGGTTCAGAAATCTCTTCCATGGTCTTaGCCTTTGCTCCCAGGGACA | + |
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Preference number: 4 (lower is better) Translates to: HKEESPGKKNKGRFQVQKSLPWS*PLLPGT Trigger: TGTCCCTGGGAGCAAAGGGCAAGACCATGGAAGAGA...TTTCTGAACCTGGAATCTGCCTTTATTCTTCTTCCCTGGTGACTCCTCTTTATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043058.5 |
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| CDS-3UTR TCA 90 bp | CACATAAAGAGGAGTCACCAGGGAAGAAGAATAAAGGCAGATTCCAGGTTCAGAGTTTCTTGGCTTCTGTaGTCCCAGATAGGTCAGCTT | + |
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Preference number: 4 (lower is better) Translates to: HIKRSHQGRRIKADSRFRVSWLL*SQIGQL Trigger: AAGCTGACCTATCTGGGATCACAGAAGCCAAGAAAC...TCTGAACCTGGAATCTGCCTTTATTCTTCTTCCCTGGTGACTCCTCTTTATGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043058.5 |
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| CDS-3UTR CCA 90 bp | AATAAAGGCAGATTCCAGGTTCAGAAATATGCACAGATGCTCCCAAGAGGCCCACTTAATCCCCATTTCTaGAAGGACATCCTCTTCCAG | + |
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Preference number: 4 (lower is better) Translates to: NKGRFQVQKYAQMLPRGPLNPHF*KDILFQ Trigger: CTGGAAGAGGATGTCCTTCCAGAAATGGGGATTAAG...TGGGCCTCTTGGGAGCATCTGTGCATATTTCTGAACCTGGAATCTGCCTTTATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043058.5 |
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| CDS-3UTR TCA 90 bp | CACATAAAGAGGAGTCACCAGGGAAGAAGAATAAAGGCAGATTCCAGGTTCAGATCAGGAATGGCCTGTTaGAACACACAGCTGGTAATA | + |
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Preference number: 4 (lower is better) Translates to: HIKRSHQGRRIKADSRFRSGMAC*NTQLVI Trigger: TATTACCAGCTGTGTGTTTCAACAGGCCATTCCTGA...TCTGAACCTGGAATCTGCCTTTATTCTTCTTCCCTGGTGACTCCTCTTTATGTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043058.5 |
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| CDS-3UTR CCA 90 bp | GGAAAGCATAACCTTGAGAAAGCATGGCACCAGGCCTTCTCAGATGCTGGAATGTTGTCTTGGTGTTCATaGAATACAATGTCCATTTCC | + |
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Preference number: 4 (lower is better) Translates to: GKHNLEKAWHQAFSDAGMLSWCS*NTMSIS Trigger: GGAAATGGACATTGTATTCCATGAACACCAAGACAA...CATTCCAGCATCTGAGAAGGCCTGGTGCCATGCTTTCTCAAGGTTATGCTTTCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043058.5 |
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| CDS-3UTR CCA 90 bp | CACCAGGGAAGAAGAATAAAGGCAGATTCCAGGTTCAGAAATATGCACAGATGCGCTCCTCTATTTGGCTaGAAAACAAAGTTTTCCTCC | + |
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Preference number: 4 (lower is better) Translates to: HQGRRIKADSRFRNMHRCAPLFG*KTKFSS Trigger: GGAGGAAAACTTTGTTTTCCAGCCAAATAGAGGAGC...GCATCTGTGCATATTTCTGAACCTGGAATCTGCCTTTATTCTTCTTCCCTGGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043058.5 |
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| CDS-3UTR CCA 90 bp | TGCCAATGCCTAGGTTTGGGGTACAGACACATAAAGAGGAGTCACCAGGGAAGATTTAGCTCCTCTATTTaGCTGGAAAACAAAGTTTTC | + |
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Preference number: 4 (lower is better) Translates to: CQCLGLGYRHIKRSHQGRFSSSI*LENKVF Trigger: GAAAACTTTGTTTTCCAGCCAAATAGAGGAGCTAAA...TCTTCCCTGGTGACTCCTCTTTATGTGTCTGTACCCCAAACCTAGGCATTGGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000043058.5 |
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| CDS-3UTR CCA 90 bp | GTAATGTTTATCGATCCTTTCCTCCTGTCTCCTATTTTGGTTGGTGGTGTTCATCTAAAATCTCTTCCATaGTCTTGCCCTTTGCTCCCA | + |
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Preference number: 4 (lower is better) Translates to: VMFIDPFLLSPILVGGVHLKSLP*SCPLLP Trigger: TGGGAGCAAAGGGCAAGACCATGGAAGAGATTTTAG...ATGAACACCACCAACCAAAATAGGAGACAGGAGGAAAGGATCGATAAACATTAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043058.5 |
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| 3UTR CAA 72 bp | AGATGTGCTCAAAGTTGGTATTGGAACTCTGTGTATTaGCCAATGCCTAGGTTTGGGGTACAGACACATAAA | + |
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Preference number: 4 (lower is better) Translates to: RCAQSWYWNSVY*PMPRFGVQTHK Trigger: TTTATGTGTCTGTACCCCAAACCTAGGCATTGGCAAATACACAGAGTTCCAATACCAACTTTGAGCACATCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043058.5 |
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| CDS-3UTR CCA 90 bp | GAGTCACCAGGGAAGAAGAATAAAGGCAGATTCCAGGTTCAGAAATATGCACAGACTTCATTTTCATCATaGGAACCTTCACAGATCTCT | + |
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Preference number: 4 (lower is better) Translates to: ESPGKKNKGRFQVQKYAQTSFSS*EPSQIS Trigger: AGAGATCTGTGAAGGTTCCCATGATGAAAATGAAGT...CTGTGCATATTTCTGAACCTGGAATCTGCCTTTATTCTTCTTCCCTGGTGACTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043058.5 |
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| CDS-3UTR CAA 90 bp | CAGGCTCAGGGGACCCTGCATGGGGCACTGAGTGGCAAAGCCTGCAGAGGGAAATTCAAAGCCAGCTTCTaGTACAGACTGAAGGCAAAG | + |
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Preference number: 5 (lower is better) Translates to: QAQGTLHGALSGKACRGKFKASF*YRLKAK Trigger: CTTTGCCTTCAGTCTGTACAAGAAGCTGGCTTTGAA...TTTCCCTCTGCAGGCTTTGCCACTCAGTGCCCCATGCAGGGTCCCCTGAGCCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043058.5 |
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| CDS CCA 90 bp | TTGGCCTCAGTAGGCTGCTGGAAGTCTGCTGTGAAGGCCTCAGTCTaGTACAGAGCCCTTGTCTTCTCATGGAATTCTGCCAGGATCTGC | + |
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Preference number: 5 (lower is better) Translates to: LASVGCWKSAVKASV*YRALVFSWNSARIC Trigger: GCAGATCCTGGCAGAATTCCATGAGAAGACAAGGGCTCTGTACCAGACTGAGGCCTTCACAGCAGACTTCCAGCAGCCTACTGAGGCCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043058.5 |
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| CDS-3UTR CAA 90 bp | AGGTGGAGTGCCAGGGGAAGAAGAGCTGGTCTGACCCTCAGTCCCATGCAGCTGATCAGGAATGGCCTGTaGAAACACACAGCTGGTAAT | + |
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Preference number: 5 (lower is better) Translates to: RWSARGRRAGLTLSPMQLIRNGL*KHTAGN Trigger: ATTACCAGCTGTGTGTTTCAACAGGCCATTCCTGAT...CAGCTGCATGGGACTGAGGGTCAGACCAGCTCTTCTTCCCCTGGCACTCCACCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043058.5 |
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| CDS TCA 90 bp | TCTGTGCCTGTCTCAGCCACATCCAGCACAGCCTTGTGGACCACCTaGGACACACTCAGTTTCTTGGCTTCTGTGATCCCAGATAGGTCA | + |
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Preference number: 5 (lower is better) Translates to: SVPVSATSSTALWTT*DTLSFLASVIPDRS Trigger: TGACCTATCTGGGATCACAGAAGCCAAGAAACTGAGTGTGTCTCAGGTGGTCCACAAGGCTGTGCTGGATGTGGCTGAGACAGGCACAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043058.5 |
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| CDS-3UTR CAA 90 bp | GGAATGACATTCAGAGCAACAGGTTCCCCTCTCAGTCCTGGGCCTGATTCTCAAATCTCTTCCATGGTCTaGCCCTTTGCTCCCAGGGAC | + |
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Preference number: 5 (lower is better) Translates to: GMTFRATGSPLSPGPDSQISSMV*PFAPRD Trigger: GTCCCTGGGAGCAAAGGGCAAGACCATGGAAGAGAT...TTGAGAATCAGGCCCAGGACTGAGAGGGGAACCTGTTGCTCTGAATGTCATTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043058.5 |
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| CDS TCA 90 bp | ACATGGCATTGCCTATGTTTATCTGATCCTGGTCTTCTGGCTGGCTaGGACTCTGTAGGAGGTTGCCAAAGCCCTGGTGGATGTCTGCTT | + |
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Preference number: 5 (lower is better) Translates to: TWHCLCLSDPGLLAG*DSVGGCQSPGGCLL Trigger: AAGCAGACATCCACCAGGGCTTTGGCAACCTCCTACAGAGTCTCAGCCAGCCAGAAGACCAGGATCAGATAAACATAGGCAATGCCATGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043058.5 |
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| CDS-3UTR CAA 90 bp | GCATGGGGCACTGAGTGGCAAAGCCTGCAGAGGGAAAGCATAACCTTGAGAAAGGGGGTCTCTGTGAGATaGAACTTGAGGCCTTCTAAA | + |
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Preference number: 5 (lower is better) Translates to: AWGTEWQSLQRESITLRKGVSVR*NLRPSK Trigger: TTTAGAAGGCCTCAAGTTCAATCTCACAGAGACCCC...CTTTCTCAAGGTTATGCTTTCCCTCTGCAGGCTTTGCCACTCAGTGCCCCATGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000043058.5 |
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| CDS-3UTR CAA 90 bp | GGAATGACATTCAGAGCAACAGGTTCCCCTCTCAGTCCTGGGCCTGATTCTCAATCATTGATGAGGTTTTaGGCCTCAGTAGGCTGCTGG | + |
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Preference number: 5 (lower is better) Translates to: GMTFRATGSPLSPGPDSQSLMRF*ASVGCW Trigger: CCAGCAGCCTACTGAGGCCAAAAACCTCATCAATGA...TTGAGAATCAGGCCCAGGACTGAGAGGGGAACCTGTTGCTCTGAATGTCATTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043058.5 |
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| CDS-3UTR CAA 90 bp | CACATAAAGAGGAGTCACCAGGGAAGAAGAATAAAGGCAGATTCCAGGTTCAGACTGCTGCATCCTGCCTaGGTCAGGGAGGATGAGCAG | + |
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Preference number: 5 (lower is better) Translates to: HIKRSHQGRRIKADSRFRLLHPA*VREDEQ Trigger: CTGCTCATCCTCCCTGACCAAGGCAGGATGCAGCAG...TCTGAACCTGGAATCTGCCTTTATTCTTCTTCCCTGGTGACTCCTCTTTATGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043058.5 |
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| CDS-3UTR CAA 90 bp | GATGCTGGAATGACATTCAGAGCAACAGGTTCCCCTCTCAGTCCTGGGCCTGATGACACACTCAGTTTCTaGGCTTCTGTGATCCCAGAT | + |
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Preference number: 5 (lower is better) Translates to: DAGMTFRATGSPLSPGPDDTLSF*ASVIPD Trigger: ATCTGGGATCACAGAAGCCAAGAAACTGAGTGTGTC...ATCAGGCCCAGGACTGAGAGGGGAACCTGTTGCTCTGAATGTCATTCCAGCATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043058.5 |
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| CDS-3UTR CAA 90 bp | CTGCAGAGGGAAAGCATAACCTTGAGAAAGCATGGCACCAGGCCTTCTCAGATGTCTGGTACAGAGCCCTaGTCTTCTCATGGAATTCTG | + |
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Preference number: 5 (lower is better) Translates to: LQRESITLRKHGTRPSQMSGTEP*SSHGIL Trigger: CAGAATTCCATGAGAAGACAAGGGCTCTGTACCAGA...CATCTGAGAAGGCCTGGTGCCATGCTTTCTCAAGGTTATGCTTTCCCTCTGCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043058.5 |
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| CDS-3UTR CAA 90 bp | CTGCAGAGGGAAAGCATAACCTTGAGAAAGCATGGCACCAGGCCTTCTCAGATGCAATGTCCATTTCCTTaGTGCCATCTGGGAAGCATA | + |
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Preference number: 5 (lower is better) Translates to: LQRESITLRKHGTRPSQMQCPFP*CHLGSI Trigger: TATGCTTCCCAGATGGCACAAAGGAAATGGACATTG...CATCTGAGAAGGCCTGGTGCCATGCTTTCTCAAGGTTATGCTTTCCCTCTGCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043058.5 |
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| CDS CCA 90 bp | TACTTCAGCTCCAACACAGAGCACGATAGCTCCTCATCACGGAAGTaGCGTGCAGTCAGTAACTTCATTTTCATCATGGGAACCTTCACA | + |
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Preference number: 5 (lower is better) Translates to: YFSSNTEHDSSSSRK*RAVSNFIFIMGTFT Trigger: TGTGAAGGTTCCCATGATGAAAATGAAGTTACTGACTGCACGCCACTTCCGTGATGAGGAGCTATCGTGCTCTGTGTTGGAGCTGAAGTA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043058.5 |
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| CDS-3UTR CAA 90 bp | CCGACACTGAGAGTCCAAAGTCTTATGTGCATGTGGGATCACAGAGATAGTCAAAAGGCAAAGTCAGTGTaGACGGAGGCCAATGTGAGA | + |
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Preference number: 5 (lower is better) Translates to: PTLRVQSLMCMWDHRDSQKAKSV*TEANVR Trigger: TCTCACATTGGCCTCCGTCAACACTGACTTTGCCTT...TTGACTATCTCTGTGATCCCACATGCACATAAGACTTTGGACTCTCAGTGTCGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043058.5 |
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| CDS TCA 90 bp | ATCTGCAGGTCCTTTTCAATAAACATGGCATTGCCTATGTTTATCTaGTCCTGGTCTTCTGGCTGGCTGAGACTCTGTAGGAGGTTGCCA | + |
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Preference number: 5 (lower is better) Translates to: ICRSFSINMALPMFI*SWSSGWLRLCRRLP Trigger: TGGCAACCTCCTACAGAGTCTCAGCCAGCCAGAAGACCAGGATCAGATAAACATAGGCAATGCCATGTTTATTGAAAAGGACCTGCAGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043058.5 |
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| CDS GCA 90 bp | TCCCATTGTCTTGGTGTTCATGGAATACAATGTCCATTTCCTTTGTaGCATCTGGGAAGCATAGGACAGCAGGACAGATTCCAGCCATTA | + |
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Preference number: 5 (lower is better) Translates to: SHCLGVHGIQCPFPL*HLGSIGQQDRFQPL Trigger: TAATGGCTGGAATCTGTCCTGCTGTCCTATGCTTCCCAGATGGCACAAAGGAAATGGACATTGTATTCCATGAACACCAAGACAATGGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043058.5 |
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| CDS CCA 90 bp | GCCAATGTGAGACTGTCATCTTGTGTCCCATTGTCTTGGTGTTCATaGAATACAATGTCCATTTCCTTTGTGCCATCTGGGAAGCATAGG | + |
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Preference number: 5 (lower is better) Translates to: ANVRLSSCVPLSWCS*NTMSISFVPSGKHR Trigger: CCTATGCTTCCCAGATGGCACAAAGGAAATGGACATTGTATTCCATGAACACCAAGACAATGGGACACAAGATGACAGTCTCACATTGGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043058.5 |
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| CDS CCA 90 bp | CCTCATCACGGAAGTGGCGTGCAGTCAGTAACTTCATTTTCATCATaGGAACCTTCACAGATCTCTTCTCATCCAAGTAGAACTCAGACT | + |
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Preference number: 5 (lower is better) Translates to: PHHGSGVQSVTSFSS*EPSQISSHPSRTQT Trigger: AGTCTGAGTTCTACTTGGATGAGAAGAGATCTGTGAAGGTTCCCATGATGAAAATGAAGTTACTGACTGCACGCCACTTCCGTGATGAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043058.5 |
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| CDS-3UTR CAA 90 bp | AGAATAAAGGCAGATTCCAGGTTCAGAAATATGCACAGATGCTCCCAAGAGGCCTTGGGGTTATTGACTTaGGCCATAAAGAGGATACTC | + |
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Preference number: 5 (lower is better) Translates to: RIKADSRFRNMHRCSQEALGLLT*AIKRIL Trigger: GAGTATCCTCTTTATGGCCAAAGTCAATAACCCCAA...GGCCTCTTGGGAGCATCTGTGCATATTTCTGAACCTGGAATCTGCCTTTATTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043058.5 |
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| CDS-3UTR CAA 90 bp | AAAGTTGGTATTGGAACTCTGTGTATTTGCCAATGCCTAGGTTTGGGGTACAGATTGTGTCCCATTGTCTaGGTGTTCATGGAATACAAT | + |
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Preference number: 5 (lower is better) Translates to: KVGIGTLCICQCLGLGYRLCPIV*VFMEYN Trigger: ATTGTATTCCATGAACACCAAGACAATGGGACACAA...TCTGTACCCCAAACCTAGGCATTGGCAAATACACAGAGTTCCAATACCAACTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043058.5 |
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| CDS CCA 72 bp | GGCTGGCTGAGACTCTGTAGGAGGTTGCCAAAGCCCTaGTGGATGTCTGCTTCAGGGGTCTCTGTGAGATTG | + |
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Preference number: 6 (lower is better) Translates to: GWLRLCRRLPKP*WMSASGVSVRL Trigger: CAATCTCACAGAGACCCCTGAAGCAGACATCCACCAGGGCTTTGGCAACCTCCTACAGAGTCTCAGCCAGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043058.5 |
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| CDS TCA 72 bp | GTCTCAGCCACATCCAGCACAGCCTTGTGGACCACCTaGGACACACTCAGTTTCTTGGCTTCTGTGATCCCA | + |
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Preference number: 6 (lower is better) Translates to: VSATSSTALWTT*DTLSFLASVIP Trigger: TGGGATCACAGAAGCCAAGAAACTGAGTGTGTCTCAGGTGGTCCACAAGGCTGTGCTGGATGTGGCTGAGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043058.5 |
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| CDS GCA 72 bp | GATGAGGTTTTTGGCCTCAGTAGGCTGCTGGAAGTCTaGTGTGAAGGCCTCAGTCTGGTACAGAGCCCTTGT | + |
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Preference number: 6 (lower is better) Translates to: DEVFGLSRLLEV*CEGLSLVQSPC Trigger: ACAAGGGCTCTGTACCAGACTGAGGCCTTCACAGCAGACTTCCAGCAGCCTACTGAGGCCAAAAACCTCATC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043058.5 |
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| CDS TCA 72 bp | TGCCTATGTTTATCTGATCCTGGTCTTCTGGCTGGCTaGGACTCTGTAGGAGGTTGCCAAAGCCCTGGTGGA | + |
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Preference number: 6 (lower is better) Translates to: CLCLSDPGLLAG*DSVGGCQSPGG Trigger: TCCACCAGGGCTTTGGCAACCTCCTACAGAGTCTCAGCCAGCCAGAAGACCAGGATCAGATAAACATAGGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043058.5 |
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| CDS CAA 90 bp | GTGTCCCATTGTCTTGGTGTTCATGGAATACAATGTCCATTTCCTTaGTGCCATCTGGGAAGCATAGGACAGCAGGACAGATTCCAGCCA | + |
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Preference number: 6 (lower is better) Translates to: VSHCLGVHGIQCPFP*CHLGSIGQQDRFQP Trigger: TGGCTGGAATCTGTCCTGCTGTCCTATGCTTCCCAGATGGCACAAAGGAAATGGACATTGTATTCCATGAACACCAAGACAATGGGACAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043058.5 |
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| CDS GCA 72 bp | AGTCTGGTACAGAGCCCTTGTCTTCTCATGGAATTCTaGCAGGATCTGCAGGTCCTTTTCAATAAACATGGC | + |
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Preference number: 6 (lower is better) Translates to: SLVQSPCLLMEF*QDLQVLFNKHG Trigger: GCCATGTTTATTGAAAAGGACCTGCAGATCCTGGCAGAATTCCATGAGAAGACAAGGGCTCTGTACCAGACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043058.5 |
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| CDS CCA 72 bp | AGCTTGTTCTGTGAAGACTTCCTTAATCCCCATTTCTaGAAGGACATCCTCTTCCAGCCTGTAGTCACTAGC | + |
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Preference number: 6 (lower is better) Translates to: SLFCEDFLNPHF*KDILFQPVVTS Trigger: GCTAGTGACTACAGGCTGGAAGAGGATGTCCTTCCAGAAATGGGGATTAAGGAAGTCTTCACAGAACAAGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043058.5 |
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| CDS CAA 90 bp | GAAGGCAAAGTCAGTGTTGACGGAGGCCAATGTGAGACTGTCATCTaGTGTCCCATTGTCTTGGTGTTCATGGAATACAATGTCCATTTC | + |
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Preference number: 6 (lower is better) Translates to: EGKVSVDGGQCETVI*CPIVLVFMEYNVHF Trigger: GAAATGGACATTGTATTCCATGAACACCAAGACAATGGGACACAAGATGACAGTCTCACATTGGCCTCCGTCAACACTGACTTTGCCTTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043058.5 |
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| CDS GCA 72 bp | CTTGGTGTTCATGGAATACAATGTCCATTTCCTTTGTaGCATCTGGGAAGCATAGGACAGCAGGACAGATTC | + |
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Preference number: 6 (lower is better) Translates to: LGVHGIQCPFPL*HLGSIGQQDRF Trigger: GAATCTGTCCTGCTGTCCTATGCTTCCCAGATGGCACAAAGGAAATGGACATTGTATTCCATGAACACCAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043058.5 |
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| CDS GCA 72 bp | AGAGCCCTTGTCTTCTCATGGAATTCTGCCAGGATCTaGAGGTCCTTTTCAATAAACATGGCATTGCCTATG | + |
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Preference number: 6 (lower is better) Translates to: RALVFSWNSARI*RSFSINMALPM Trigger: CATAGGCAATGCCATGTTTATTGAAAAGGACCTGCAGATCCTGGCAGAATTCCATGAGAAGACAAGGGCTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043058.5 |
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| CDS CAA 72 bp | GTCAGTGTTGACGGAGGCCAATGTGAGACTGTCATCTaGTGTCCCATTGTCTTGGTGTTCATGGAATACAAT | + |
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Preference number: 6 (lower is better) Translates to: VSVDGGQCETVI*CPIVLVFMEYN Trigger: ATTGTATTCCATGAACACCAAGACAATGGGACACAAGATGACAGTCTCACATTGGCCTCCGTCAACACTGAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043058.5 |
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| CDS TCA 72 bp | TCAATGTCCCATCATCCAGTTCTGAGATCAGTTTCTTaGTCATCCCCTGGGTCTGATTGCTCACATAGTCAT | + |
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Preference number: 6 (lower is better) Translates to: SMSHHPVLRSVS*SSPGSDCSHSH Trigger: ATGACTATGTGAGCAATCAGACCCAGGGGATGATCAAGAAACTGATCTCAGAACTGGATGATGGGACATTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043058.5 |
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| CDS CCA 72 bp | AGACTGTCATCTTGTGTCCCATTGTCTTGGTGTTCATaGAATACAATGTCCATTTCCTTTGTGCCATCTGGG | + |
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Preference number: 6 (lower is better) Translates to: RLSSCVPLSWCS*NTMSISFVPSG Trigger: CCCAGATGGCACAAAGGAAATGGACATTGTATTCCATGAACACCAAGACAATGGGACACAAGATGACAGTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043058.5 |
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