Pregenerated sensors for SERPINA3J (Mus musculus)
Ensembl gene IDs: ENSMUSG00000079013Ensembl transcript IDs: ENSMUST00000109957.3
Found 94 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | ATAAGCAGGAAAATGGAAGAAAGACAGGTTTTAGGCTCAGGAATATaGGCTAGAGTTGCCAAGAAGACAGGGAGCCTGACCCAGACCATC | + |
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Preference number: 1 (lower is better) Translates to: ISRKMEERQVLGSGI*ARVAKKTGSLTQTI Trigger: GATGGTCTGGGTCAGGCTCCCTGTCTTCTTGGCAACTCTAGCTCATATTCCTGAGCCTAAAACCTGTCTTTCTTCCATTTTCCTGCTTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109957.3 |
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| 3UTR CCA 90 bp | GTGCAGGTATACGTTTATTCATCCTTTGCTCCTGCCTTTTCATTTTaGGTGATGAAGGTGGAAGTGTCCATCTGTCCTGTGAGATCGGTC | + |
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Preference number: 1 (lower is better) Translates to: VQVYVYSSFAPAFSF*VMKVEVSICPVRSV Trigger: GACCGATCTCACAGGACAGATGGACACTTCCACCTTCATCACCCAAAATGAAAAGGCAGGAGCAAAGGATGAATAAACGTATACCTGCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109957.3 |
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| 3UTR-3UTR TCA 90 bp | GCCTTTTCATTTTGGGTGATGAAGGTGGAAGTGTCCATCTGTCCTGTGAGATCGAGAAGACAGGGAGCCTaGCCCAGACCATCCTCAAGC | + |
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Preference number: 2 (lower is better) Translates to: AFSFWVMKVEVSICPVRSRRQGA*PRPSSS Trigger: GCTTGAGGATGGTCTGGGTCAGGCTCCCTGTCTTCT...CGATCTCACAGGACAGATGGACACTTCCACCTTCATCACCCAAAATGAAAAGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109957.3 |
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| 3UTR-3UTR TCA 90 bp | CATGCAGCTGCAGGAGGGAGGACTCCAATCTGTGAGCAGGATCCAGAGACTCTGTCAGAGGATGGAACCTaGAAAGCATCTTTAGACTCA | + |
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Preference number: 2 (lower is better) Translates to: HAAAGGRTPICEQDPETLSEDGT*KASLDS Trigger: TGAGTCTAAAGATGCTTTTCAGGTTCCATCCTCTGA...CAGAGTCTCTGGATCCTGCTCACAGATTGGAGTCCTCCCTCCTGCAGCTGCATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109957.3 |
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| 3UTR-3UTR TCA 90 bp | GAGACTCTGCACTGGTCACTAGGTGACAGATCCTATGGTAGAGAAAGAGTGAGATTAGGCTCAGGAATATaGGCTAGAGTTGCCAAGAAG | + |
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Preference number: 2 (lower is better) Translates to: ETLHWSLGDRSYGRERVRLGSGI*ARVAKK Trigger: CTTCTTGGCAACTCTAGCTCATATTCCTGAGCCTAA...TCTCACTCTTTCTCTACCATAGGATCTGTCACCTAGTGACCAGTGCAGAGTCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109957.3 |
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| 3UTR-3UTR CCA 90 bp | AATAGACACAGGGCAGCAAGTTCCCATCTTGTTCCTGAACCTGTTGTTCTCATGAACCAGAGCCCAAATTaGGAAAGCACCTACCTGTCA | + |
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Preference number: 2 (lower is better) Translates to: NRHRAASSHLVPEPVVLMNQSPN*ESTYLS Trigger: TGACAGGTAGGTGCTTTCCCAATTTGGGCTCTGGTT...CATGAGAACAACAGGTTCAGGAACAAGATGGGAACTTGCTGCCCTGTGTCTATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109957.3 |
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| 3UTR CAA 90 bp | TGTGCAGGTATACGTTTATTCATCCTTTGCTCCTGCCTTTTCATTTaGGGTGATGAAGGTGGAAGTGTCCATCTGTCCTGTGAGATCGGT | + |
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Preference number: 2 (lower is better) Translates to: CAGIRLFILCSCLFI*GDEGGSVHLSCEIG Trigger: ACCGATCTCACAGGACAGATGGACACTTCCACCTTCATCACCCAAAATGAAAAGGCAGGAGCAAAGGATGAATAAACGTATACCTGCACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109957.3 |
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| 3UTR-3UTR CCA 90 bp | AACAAGAGTCACAGAGTGAGAGTGATAGTCTCTATGTCCCTGTTGTCACTAGTGCCTGCCTTTTCATTTTaGGTGATGAAGGTGGAAGTG | + |
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Preference number: 2 (lower is better) Translates to: NKSHRVRVIVSMSLLSLVPAFSF*VMKVEV Trigger: CACTTCCACCTTCATCACCCAAAATGAAAAGGCAGG...CACTAGTGACAACAGGGACATAGAGACTATCACTCTCACTCTGTGACTCTTGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109957.3 |
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| 3UTR TCA 72 bp | ACCCCATGCAGCTGCAGGAGGGAGGACTCCAATCTGTaGGCAGGATCCAGAGACTCTGCACTGGTCACTAGG | + |
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Preference number: 3 (lower is better) Translates to: TPCSCRREDSNL*AGSRDSALVTR Trigger: CCTAGTGACCAGTGCAGAGTCTCTGGATCCTGCTCACAGATTGGAGTCCTCCCTCCTGCAGCTGCATGGGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109957.3 |
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| 3UTR TCA 72 bp | GTCACTAGTGCCTACCCCCTGCCAACAGTAGCTGAGTaGACACTGCCTGGACACTTTCTGTGCAGGTATACG | + |
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Preference number: 3 (lower is better) Translates to: VTSAYPLPTVAE*TLPGHFLCRYT Trigger: CGTATACCTGCACAGAAAGTGTCCAGGCAGTGTTCACTCAGCTACTGTTGGCAGGGGGTAGGCACTAGTGAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109957.3 |
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| 3UTR-3UTR CAA 90 bp | CATGCAGCTGCAGGAGGGAGGACTCCAATCTGTGAGCAGGATCCAGAGACTCTGTTGTTCCTGAACCTGTaGTTCTCATGGGTTGGCCTA | + |
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Preference number: 3 (lower is better) Translates to: HAAAGGRTPICEQDPETLLFLNL*FSWVGL Trigger: TAGGCCAACCCATGAGAACAACAGGTTCAGGAACAA...CAGAGTCTCTGGATCCTGCTCACAGATTGGAGTCCTCCCTCCTGCAGCTGCATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109957.3 |
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| 3UTR-3UTR CAA 90 bp | GAGACTCTGCACTGGTCACTAGGTGACAGATCCTATGGTAGAGAAAGAGTGAGATCAGGGCTCAGGCTTTaGGGTAGAGGCAGATACAGG | + |
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Preference number: 3 (lower is better) Translates to: ETLHWSLGDRSYGRERVRSGLRL*GRGRYR Trigger: CCTGTATCTGCCTCTACCCAAAAGCCTGAGCCCTGA...TCTCACTCTTTCTCTACCATAGGATCTGTCACCTAGTGACCAGTGCAGAGTCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109957.3 |
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| 3UTR-3UTR CAA 90 bp | GTGTTCCAGATGCTGCCAATAGACACAGGGCAGCAAGTTCCCATCTTGTTCCTGAAACCAGAGCCCAAATaGGGAAAGCACCTACCTGTC | + |
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Preference number: 3 (lower is better) Translates to: VFQMLPIDTGQQVPILFLKPEPK*GKHLPV Trigger: GACAGGTAGGTGCTTTCCCAATTTGGGCTCTGGTTT...CAGGAACAAGATGGGAACTTGCTGCCCTGTGTCTATTGGCAGCATCTGGAACAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109957.3 |
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| 3UTR TCA 72 bp | GAATATGAGCTAGAGTTGCCAAGAAGACAGGGAGCCTaGCCCAGACCATCCTCAAGCTCCTGTGAATGTGTG | + |
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Preference number: 3 (lower is better) Translates to: EYELELPRRQGA*PRPSSSSCECV Trigger: CACACATTCACAGGAGCTTGAGGATGGTCTGGGTCAGGCTCCCTGTCTTCTTGGCAACTCTAGCTCATATTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109957.3 |
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| 3UTR-3UTR CAA 90 bp | GCCTTTTCATTTTGGGTGATGAAGGTGGAAGTGTCCATCTGTCCTGTGAGATCGGAATATGAGCTAGAGTaGCCAAGAAGACAGGGAGCC | + |
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Preference number: 3 (lower is better) Translates to: AFSFWVMKVEVSICPVRSEYELE*PRRQGA Trigger: GGCTCCCTGTCTTCTTGGCAACTCTAGCTCATATTC...CGATCTCACAGGACAGATGGACACTTCCACCTTCATCACCCAAAATGAAAAGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109957.3 |
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| 3UTR TCA 72 bp | AAAATGGAAGAAAGACAGGTTTTAGGCTCAGGAATATaGGCTAGAGTTGCCAAGAAGACAGGGAGCCTGACC | + |
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Preference number: 3 (lower is better) Translates to: KMEERQVLGSGI*ARVAKKTGSLT Trigger: GGTCAGGCTCCCTGTCTTCTTGGCAACTCTAGCTCATATTCCTGAGCCTAAAACCTGTCTTTCTTCCATTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109957.3 |
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| 3UTR CCA 72 bp | TACGTTTATTCATCCTTTGCTCCTGCCTTTTCATTTTaGGTGATGAAGGTGGAAGTGTCCATCTGTCCTGTG | + |
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Preference number: 3 (lower is better) Translates to: YVYSSFAPAFSF*VMKVEVSICPV Trigger: CACAGGACAGATGGACACTTCCACCTTCATCACCCAAAATGAAAAGGCAGGAGCAAAGGATGAATAAACGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109957.3 |
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| 3UTR GCA 72 bp | TTCTGTGCAGGTATACGTTTATTCATCCTTTGCTCCTaGCTTTTCATTTTGGGTGATGAAGGTGGAAGTGTC | + |
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Preference number: 3 (lower is better) Translates to: FCAGIRLFILCS*LFILGDEGGSV Trigger: GACACTTCCACCTTCATCACCCAAAATGAAAAGGCAGGAGCAAAGGATGAATAAACGTATACCTGCACAGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109957.3 |
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| 3UTR GCA 72 bp | GACACTTTCTGTGCAGGTATACGTTTATTCATCCTTTaGTCCTGCCTTTTCATTTTGGGTGATGAAGGTGGA | + |
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Preference number: 3 (lower is better) Translates to: DTFCAGIRLFIL*SCLFILGDEGG Trigger: TCCACCTTCATCACCCAAAATGAAAAGGCAGGAGCAAAGGATGAATAAACGTATACCTGCACAGAAAGTGTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109957.3 |
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| 3UTR-3UTR CAA 90 bp | AACAAGAGTCACAGAGTGAGAGTGATAGTCTCTATGTCCCTGTTGTCACTAGTGACGTTTATTCATCCTTaGCTCCTGCCTTTTCATTTT | + |
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Preference number: 3 (lower is better) Translates to: NKSHRVRVIVSMSLLSLVTFIHP*LLPFHF Trigger: AAAATGAAAAGGCAGGAGCAAAGGATGAATAAACGT...CACTAGTGACAACAGGGACATAGAGACTATCACTCTCACTCTGTGACTCTTGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109957.3 |
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| CDS-3UTR TCA 90 bp | CATGCAGCTGCAGGAGGGAGGACTCCAATCTGTGAGCAGGATCCAGAGACTCTGGGTCCCCTGGCTGACTaGGCCTCTGTAGGAGGTGCC | + |
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Preference number: 4 (lower is better) Translates to: HAAAGGRTPICEQDPETLGPLAD*ASVGGA Trigger: GGCACCTCCTACAGAGGCTCAGTCAGCCAGGGGACC...CAGAGTCTCTGGATCCTGCTCACAGATTGGAGTCCTCCCTCCTGCAGCTGCATG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109957.3 |
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| CDS-3UTR CCA 90 bp | CATGCAGCTGCAGGAGGGAGGACTCCAATCTGTGAGCAGGATCCAGAGACTCTGTGCCCAAAGCCCTGGTaGATGTCTGCCTCAGGGGTC | + |
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Preference number: 4 (lower is better) Translates to: HAAAGGRTPICEQDPETLCPKPW*MSASGV Trigger: GACCCCTGAGGCAGACATCCACCAGGGCTTTGGGCA...CAGAGTCTCTGGATCCTGCTCACAGATTGGAGTCCTCCCTCCTGCAGCTGCATG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109957.3 |
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| CDS-3UTR GCA 90 bp | CACAGGGCAGCAAGTTCCCATCTTGTTCCTGAACCTGTTGTTCTCATGGGTTGGCAGAGTGTTGCCCTTTaGTCCCAGGGACAGGGAGGC | + |
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Preference number: 4 (lower is better) Translates to: HRAASSHLVPEPVVLMGWQSVAL*SQGQGG Trigger: GCCTCCCTGTCCCTGGGAGCAAAGGGCAACACTCTG...CCAACCCATGAGAACAACAGGTTCAGGAACAAGATGGGAACTTGCTGCCCTGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109957.3 |
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| CDS-3UTR TCA 90 bp | GCCTTTTCATTTTGGGTGATGAAGGTGGAAGTGTCCATCTGTCCTGTGAGATCGACCTGGTCCCCTGGCTaGCTGAGCCTCTGTAGGAGG | + |
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Preference number: 4 (lower is better) Translates to: AFSFWVMKVEVSICPVRSTWSPG*LSLCRR Trigger: CCTCCTACAGAGGCTCAGTCAGCCAGGGGACCAGGT...CGATCTCACAGGACAGATGGACACTTCCACCTTCATCACCCAAAATGAAAAGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000109957.3 |
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| CDS-3UTR GCA 90 bp | AATAGACACAGGGCAGCAAGTTCCCATCTTGTTCCTGAACCTGTTGTTCTCATGGCCCTGGTGGATGTCTaGCTCAGGGGTCTCTGTCAG | + |
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Preference number: 4 (lower is better) Translates to: NRHRAASSHLVPEPVVLMALVDV*LRGLCQ Trigger: CTGACAGAGACCCCTGAGGCAGACATCCACCAGGGC...CATGAGAACAACAGGTTCAGGAACAAGATGGGAACTTGCTGCCCTGTGTCTATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109957.3 |
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| CDS-3UTR GCA 90 bp | CCTGAACCTGTTGTTCTCATGGGTTGGCCTATAAGCTTACATAGATGGCCCCATCTGGCCTCACGAGGCTaGTGGAAGTCTGCTGTGAAG | + |
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Preference number: 4 (lower is better) Translates to: PEPVVLMGWPISLHRWPHLASRG*WKSAVK Trigger: CTTCACAGCAGACTTCCAGCAGCCTCGTGAGGCCAG...ATGGGGCCATCTATGTAAGCTTATAGGCCAACCCATGAGAACAACAGGTTCAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109957.3 |
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| CDS-3UTR GCA 90 bp | AAAGCAGACAAAACCAGAGCCCAAATTGGGAAAGCACCTACCTGTCAGGGCTCAAGGCTGCTGGAAGTCTaGTGTGAAGACCTCAGTGTG | + |
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Preference number: 4 (lower is better) Translates to: KADKTRAQIGKAPTCQGSRLLEV*CEDLSV Trigger: CACACTGAGGTCTTCACAGCAGACTTCCAGCAGCCT...TGAGCCCTGACAGGTAGGTGCTTTCCCAATTTGGGCTCTGGTTTTGTCTGCTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109957.3 |
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| CDS-3UTR CCA 90 bp | AACAAGAGTCACAGAGTGAGAGTGATAGTCTCTATGTCCCTGTTGTCACTAGTGAGGTGCCCAAAGCCCTaGTGGATGTCTGCCTCAGGG | + |
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Preference number: 4 (lower is better) Translates to: NKSHRVRVIVSMSLLSLVRCPKP*WMSASG Trigger: CCCTGAGGCAGACATCCACCAGGGCTTTGGGCACCT...CACTAGTGACAACAGGGACATAGAGACTATCACTCTCACTCTGTGACTCTTGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109957.3 |
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| CDS-3UTR CCA 90 bp | CAGAGTGAGAGTGATAGTCTCTATGTCCCTGTTGTCACTAGTGCCTACCCCCTGGTGAAGACCTCAGTGTaGTACAAAGCCCTTGCCTTC | + |
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Preference number: 4 (lower is better) Translates to: QSESDSLYVPVVTSAYPLVKTSV*YKALAF Trigger: GAAGGCAAGGGCTTTGTACCACACTGAGGTCTTCAC...CAGGGGGTAGGCACTAGTGACAACAGGGACATAGAGACTATCACTCTCACTCTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109957.3 |
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| CDS-3UTR GCA 90 bp | AGTCACAGAGTGAGAGTGATAGTCTCTATGTCCCTGTTGTCACTAGTGCCTACCTCTCTTCCAGAGTGTTaGCCTTTGCTCCCAGGGACA | + |
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Preference number: 4 (lower is better) Translates to: SHRVRVIVSMSLLSLVPTSLPEC*PLLPGT Trigger: TGTCCCTGGGAGCAAAGGGCAACACTCTGGAAGAGA...GGTAGGCACTAGTGACAACAGGGACATAGAGACTATCACTCTCACTCTGTGACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109957.3 |
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| CDS-3UTR CCA 90 bp | CACAGGGCAGCAAGTTCCCATCTTGTTCCTGAACCTGTTGTTCTCATGGGTTGGAATTCGTCATCACCATaGATGTCCTCTCCTCCAGGT | + |
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Preference number: 4 (lower is better) Translates to: HRAASSHLVPEPVVLMGWNSSSP*MSSPPG Trigger: ACCTGGAGGAGAGGACATCCATGGTGATGACGAATT...CCAACCCATGAGAACAACAGGTTCAGGAACAAGATGGGAACTTGCTGCCCTGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109957.3 |
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| 3UTR CAA 72 bp | ATGCTGCCAATAGACACAGGGCAGCAAGTTCCCATCTaGTTCCTGAACCTGTTGTTCTCATGGGTTGGCCTA | + |
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Preference number: 4 (lower is better) Translates to: MLPIDTGQQVPI*FLNLLFSWVGL Trigger: TAGGCCAACCCATGAGAACAACAGGTTCAGGAACAAGATGGGAACTTGCTGCCCTGTGTCTATTGGCAGCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109957.3 |
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| CDS-3UTR GCA 90 bp | AGTCACAGAGTGAGAGTGATAGTCTCTATGTCCCTGTTGTCACTAGTGCCTACCCTTCTCCTTGAACTCTaGCAGGATCTGCAGGTGCTT | + |
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Preference number: 4 (lower is better) Translates to: SHRVRVIVSMSLLSLVPTLLLEL*QDLQVL Trigger: AAGCACCTGCAGATCCTGGCAGAGTTCAAGGAGAAG...GGTAGGCACTAGTGACAACAGGGACATAGAGACTATCACTCTCACTCTGTGACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109957.3 |
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| CDS-3UTR GCA 90 bp | GAGACTCTGCACTGGTCACTAGGTGACAGATCCTATGGTAGAGAAAGAGTGAGAGTGGTACAAAGCCCTTaGCTTCTCCTTGAACTCTGC | + |
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Preference number: 4 (lower is better) Translates to: ETLHWSLGDRSYGRERVRVVQSP*LLLELC Trigger: GCAGAGTTCAAGGAGAAGGCAAGGGCTTTGTACCAC...TCTCACTCTTTCTCTACCATAGGATCTGTCACCTAGTGACCAGTGCAGAGTCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109957.3 |
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| CDS-3UTR GCA 90 bp | GTTCCAGATGCTGCCAATAGACACAGGGCAGCAAGTTCCCATCTTGTTCCTGAAATCCCGGAAGTAGGGTaGCCTCAGTTCCTTCATTTT | + |
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Preference number: 4 (lower is better) Translates to: VPDAANRHRAASSHLVPEIPEVG*PQFLHF Trigger: AAAATGAAGGAACTGAGGGCACCCTACTTCCGGGAT...TTCAGGAACAAGATGGGAACTTGCTGCCCTGTGTCTATTGGCAGCATCTGGAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109957.3 |
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| CDS-3UTR GCA 90 bp | AGCCAAAGCAGACAAAACCAGAGCCCAAATTGGGAAAGCACCTACCTGTCAGGGTCAGCTCCACCACAGTaGATTTCATTTTCTCATCCC | + |
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Preference number: 4 (lower is better) Translates to: SQSRQNQSPNWESTYLSGSAPPQ*ISFSHP Trigger: GGGATGAGAAAATGAAATGCACTGTGGTGGAGCTGA...CCCTGACAGGTAGGTGCTTTCCCAATTTGGGCTCTGGTTTTGTCTGCTTTGGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109957.3 |
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| CDS-3UTR TCA 90 bp | GCCTTTTCATTTTGGGTGATGAAGGTGGAAGTGTCCATCTGTCCTGTGAGATCGTGGAGAAGACTTCCTTaGTACCCAGTTCTGGAAGGA | + |
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Preference number: 4 (lower is better) Translates to: AFSFWVMKVEVSICPVRSWRRLP*YPVLEG Trigger: TCCTTCCAGAACTGGGTATCAAGGAAGTCTTCTCCA...CGATCTCACAGGACAGATGGACACTTCCACCTTCATCACCCAAAATGAAAAGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109957.3 |
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| CDS-3UTR GCA 90 bp | AGAAGCCAAAGCAGACAAAACCAGAGCCCAAATTGGGAAAGCACCTACCTGTCAAACTCTGCCAGGATCTaGAGGTGCTTTTCAACAACC | + |
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Preference number: 4 (lower is better) Translates to: RSQSRQNQSPNWESTYLSNSARI*RCFSTT Trigger: GGTTGTTGAAAAGCACCTGCAGATCCTGGCAGAGTT...TGACAGGTAGGTGCTTTCCCAATTTGGGCTCTGGTTTTGTCTGCTTTGGCTTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109957.3 |
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| CDS-3UTR CCA 90 bp | GAGACTCTGCACTGGTCACTAGGTGACAGATCCTATGGTAGAGAAAGAGTGAGAGCTCATCTATCATCCTaGGCCTCAAAGATTTCCTCC | + |
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Preference number: 4 (lower is better) Translates to: ETLHWSLGDRSYGRERVRAHLSS*ASKISS Trigger: GGAGGAAATCTTTGAGGCCCAGGATGATAGATGAGC...TCTCACTCTTTCTCTACCATAGGATCTGTCACCTAGTGACCAGTGCAGAGTCTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109957.3 |
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| CDS-3UTR GCA 90 bp | CCTGAACCTGTTGTTCTCATGGGTTGGCCTATAAGCTTACATAGATGGCCCCATTTCTGGACTGGAGTGTaGTTTCCTAATGTGTCCTCT | + |
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Preference number: 4 (lower is better) Translates to: PEPVVLMGWPISLHRWPHFWTGV*FPNVSS Trigger: AGAGGACACATTAGGAAAGCACACTCCAGTCCAGAA...ATGGGGCCATCTATGTAAGCTTATAGGCCAACCCATGAGAACAACAGGTTCAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109957.3 |
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| CDS-3UTR GCA 90 bp | AGTCACAGAGTGAGAGTGATAGTCTCTATGTCCCTGTTGTCACTAGTGCCTACCGCCAGGATCTGCAGGTaGTTTTCAACAACCATTGAA | + |
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Preference number: 4 (lower is better) Translates to: SHRVRVIVSMSLLSLVPTARICR*FSTTIE Trigger: TTCAATGGTTGTTGAAAAGCACCTGCAGATCCTGGC...GGTAGGCACTAGTGACAACAGGGACATAGAGACTATCACTCTCACTCTGTGACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109957.3 |
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| CDS-3UTR CCA 90 bp | AACAAGAGTCACAGAGTGAGAGTGATAGTCTCTATGTCCCTGTTGTCACTAGTGTGCTTCATCTTGCCCTaGTCAGGGAGGATGAACATG | + |
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Preference number: 4 (lower is better) Translates to: NKSHRVRVIVSMSLLSLVCFILP*SGRMNM Trigger: CATGTTCATCCTCCCTGACCAGGGCAAGATGAAGCA...CACTAGTGACAACAGGGACATAGAGACTATCACTCTCACTCTGTGACTCTTGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109957.3 |
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| CDS-3UTR CCA 90 bp | AGTCACAGAGTGAGAGTGATAGTCTCTATGTCCCTGTTGTCACTAGTGCCTACCTGGATATGGAGAACTTaGGTAGGTAGAGCTCATCTA | + |
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Preference number: 4 (lower is better) Translates to: SHRVRVIVSMSLLSLVPTWIWRT*VGRAHL Trigger: TAGATGAGCTCTACCTACCCAAGTTCTCCATATCCA...GGTAGGCACTAGTGACAACAGGGACATAGAGACTATCACTCTCACTCTGTGACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109957.3 |
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| CDS-3UTR GCA 90 bp | AACAAGAGTCACAGAGTGAGAGTGATAGTCTCTATGTCCCTGTTGTCACTAGTGAGACTCTTACATCCTTaGCTCCTGAAATCCCTGACA | + |
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Preference number: 4 (lower is better) Translates to: NKSHRVRVIVSMSLLSLVRLLHP*LLKSLT Trigger: TGTCAGGGATTTCAGGAGGCAAGGATGTAAGAGTCT...CACTAGTGACAACAGGGACATAGAGACTATCACTCTCACTCTGTGACTCTTGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109957.3 |
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| CDS-3UTR CCA 90 bp | AACAAGAGTCACAGAGTGAGAGTGATAGTCTCTATGTCCCTGTTGTCACTAGTGCTTGATACCCAGTTCTaGAAGGATGTTCTCCAGTCT | + |
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Preference number: 4 (lower is better) Translates to: NKSHRVRVIVSMSLLSLVLDTQF*KDVLQS Trigger: AGACTGGAGAACATCCTTCCAGAACTGGGTATCAAG...CACTAGTGACAACAGGGACATAGAGACTATCACTCTCACTCTGTGACTCTTGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109957.3 |
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| 3UTR CAA 72 bp | ATACGTTTATTCATCCTTTGCTCCTGCCTTTTCATTTaGGGTGATGAAGGTGGAAGTGTCCATCTGTCCTGT | + |
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Preference number: 4 (lower is better) Translates to: IRLFILCSCLFI*GDEGGSVHLSC Trigger: ACAGGACAGATGGACACTTCCACCTTCATCACCCAAAATGAAAAGGCAGGAGCAAAGGATGAATAAACGTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109957.3 |
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| CDS-3UTR CCA 90 bp | ACTTTCTGTGCAGGTATACGTTTATTCATCCTTTGCTCCTGCCTTTTCATTTTGTGGTCTCTGTCTTTCTaGACTGGAGTGTGCTTTCCT | + |
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Preference number: 4 (lower is better) Translates to: TFCAGIRLFILCSCLFILWSLSF*TGVCFP Trigger: AGGAAAGCACACTCCAGTCCAGAAAGACAGAGACCA...CAAAATGAAAAGGCAGGAGCAAAGGATGAATAAACGTATACCTGCACAGAAAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109957.3 |
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| CDS-3UTR CCA 90 bp | ACTTTCTGTGCAGGTATACGTTTATTCATCCTTTGCTCCTGCCTTTTCATTTTGCCTTCATTTTCATCATaGACACCTTCACGGGTGTCC | + |
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Preference number: 4 (lower is better) Translates to: TFCAGIRLFILCSCLFILPSFSS*TPSRVS Trigger: GGACACCCGTGAAGGTGTCCATGATGAAAATGAAGG...CAAAATGAAAAGGCAGGAGCAAAGGATGAATAAACGTATACCTGCACAGAAAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000109957.3 |
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| CDS CCA 90 bp | CTGGCCTCACGAGGCTGCTGGAAGTCTGCTGTGAAGACCTCAGTGTaGTACAAAGCCCTTGCCTTCTCCTTGAACTCTGCCAGGATCTGC | + |
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Preference number: 5 (lower is better) Translates to: LASRGCWKSAVKTSV*YKALAFSLNSARIC Trigger: GCAGATCCTGGCAGAGTTCAAGGAGAAGGCAAGGGCTTTGTACCACACTGAGGTCTTCACAGCAGACTTCCAGCAGCCTCGTGAGGCCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109957.3 |
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| CDS TCA 90 bp | ACAACCATTGAATTGCCTGTGCTGATCTGTACCTGGTCCCCTGGCTaGCTGAGCCTCTGTAGGAGGTGCCCAAAGCCCTGGTGGATGTCT | + |
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Preference number: 5 (lower is better) Translates to: TTIELPVLICTWSPG*LSLCRRCPKPWWMS Trigger: AGACATCCACCAGGGCTTTGGGCACCTCCTACAGAGGCTCAGTCAGCCAGGGGACCAGGTACAGATCAGCACAGGCAATTCAATGGTTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109957.3 |
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| CDS-3UTR CAA 90 bp | GTTCCAGATGCTGCCAATAGACACAGGGCAGCAAGTTCCCATCTTGTTCCTGAACCAGAGTGTTGCCCTTaGCTCCCAGGGACAGGGAGG | + |
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Preference number: 5 (lower is better) Translates to: VPDAANRHRAASSHLVPEPECCP*LPGTGR Trigger: CCTCCCTGTCCCTGGGAGCAAAGGGCAACACTCTGG...TTCAGGAACAAGATGGGAACTTGCTGCCCTGTGTCTATTGGCAGCATCTGGAAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109957.3 |
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| CDS GCA 90 bp | TGGACAGGAAGTCATATTTGTCTCTTGTGGTGGCACGGGCTTCTGTaGCTGTCTCAGTCATGTCCAGCGCAGCGCTGTGAAACATCCGAG | + |
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Preference number: 5 (lower is better) Translates to: WTGSHICLLWWHGLL*LSQSCPAQRCETSE Trigger: CTCGGATGTTTCACAGCGCTGCGCTGGACATGACTGAGACAGGCACAGAAGCCCGTGCCACCACAAGAGACAAATATGACTTCCTGTCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109957.3 |
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| CDS-3UTR CAA 90 bp | CAAAGCAGACAAAACCAGAGCCCAAATTGGGAAAGCACCTACCTGTCAGGGCTCTCCACCTGCTTCATCTaGCCCTGGTCAGGGAGGATG | + |
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Preference number: 5 (lower is better) Translates to: QSRQNQSPNWESTYLSGLSTCFI*PWSGRM Trigger: CATCCTCCCTGACCAGGGCAAGATGAAGCAGGTGGA...GAGCCCTGACAGGTAGGTGCTTTCCCAATTTGGGCTCTGGTTTTGTCTGCTTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109957.3 |
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| CDS-3UTR CAA 90 bp | CAGAGTGAGAGTGATAGTCTCTATGTCCCTGTTGTCACTAGTGCCTACCCCCTGATCTCTTCCAGAGTGTaGCCCTTTGCTCCCAGGGAC | + |
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Preference number: 5 (lower is better) Translates to: QSESDSLYVPVVTSAYPLISSRV*PFAPRD Trigger: GTCCCTGGGAGCAAAGGGCAACACTCTGGAAGAGAT...CAGGGGGTAGGCACTAGTGACAACAGGGACATAGAGACTATCACTCTCACTCTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109957.3 |
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| CDS TCA 90 bp | CTCCTTGAACTCTGCCAGGATCTGCAGGTGCTTTTCAACAACCATTaGATTGCCTGTGCTGATCTGTACCTGGTCCCCTGGCTGACTGAG | + |
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Preference number: 5 (lower is better) Translates to: LLELCQDLQVLFNNH*IACADLYLVPWLTE Trigger: CTCAGTCAGCCAGGGGACCAGGTACAGATCAGCACAGGCAATTCAATGGTTGTTGAAAAGCACCTGCAGATCCTGGCAGAGTTCAAGGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109957.3 |
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| CDS GCA 90 bp | CTGTCCAGTTGTGTTTCATGGTCTCTGTCTTTCTGGACTGGAGTGTaGTTTCCTAATGTGTCCTCTGGACAGCAGAGGACAGCAGGGCAG | + |
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Preference number: 5 (lower is better) Translates to: LSSCVSWSLSFWTGV*FPNVSSGQQRTAGQ Trigger: CTGCCCTGCTGTCCTCTGCTGTCCAGAGGACACATTAGGAAAGCACACTCCAGTCCAGAAAGACAGAGACCATGAAACACAACTGGACAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109957.3 |
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| CDS GCA 90 bp | ATAGTCATTGAGGAGCTTTCTGGCCTCACGAGGCTGCTGGAAGTCTaGTGTGAAGACCTCAGTGTGGTACAAAGCCCTTGCCTTCTCCTT | + |
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Preference number: 5 (lower is better) Translates to: IVIEELSGLTRLLEV*CEDLSVVQSPCLLL Trigger: AAGGAGAAGGCAAGGGCTTTGTACCACACTGAGGTCTTCACAGCAGACTTCCAGCAGCCTCGTGAGGCCAGAAAGCTCCTCAATGACTAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109957.3 |
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| CDS-3UTR CAA 90 bp | CAGAGTGAGAGTGATAGTCTCTATGTCCCTGTTGTCACTAGTGCCTACCCCCTGGTGGAGAAGACTTCCTaGATACCCAGTTCTGGAAGG | + |
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Preference number: 5 (lower is better) Translates to: QSESDSLYVPVVTSAYPLVEKTS*IPSSGR Trigger: CCTTCCAGAACTGGGTATCAAGGAAGTCTTCTCCAC...CAGGGGGTAGGCACTAGTGACAACAGGGACATAGAGACTATCACTCTCACTCTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109957.3 |
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| CDS-3UTR CAA 90 bp | GTGTTCCAGATGCTGCCAATAGACACAGGGCAGCAAGTTCCCATCTTGTTCCTGGACAGGAAGTCATATTaGTCTCTTGTGGTGGCACGG | + |
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Preference number: 5 (lower is better) Translates to: VFQMLPIDTGQQVPILFLDRKSY*SLVVAR Trigger: CCGTGCCACCACAAGAGACAAATATGACTTCCTGTC...CAGGAACAAGATGGGAACTTGCTGCCCTGTGTCTATTGGCAGCATCTGGAACAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109957.3 |
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| CDS GCA 90 bp | CAGCTCCACCACAGTGCATTTCATTTTCTCATCCCGGAAGTAGGGTaGCCTCAGTTCCTTCATTTTCATCATGGACACCTTCACGGGTGT | + |
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Preference number: 5 (lower is better) Translates to: QLHHSAFHFLIPEVG*PQFLHFHHGHLHGC Trigger: ACACCCGTGAAGGTGTCCATGATGAAAATGAAGGAACTGAGGGCACCCTACTTCCGGGATGAGAAAATGAAATGCACTGTGGTGGAGCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109957.3 |
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| CDS-3UTR CAA 90 bp | GAGACTCTGCACTGGTCACTAGGTGACAGATCCTATGGTAGAGAAAGAGTGAGATCCATCCCCTCAGAGTaGCTGGTTGTAAGCTGGCTT | + |
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Preference number: 5 (lower is better) Translates to: ETLHWSLGDRSYGRERVRSIPSE*LVVSWL Trigger: AAGCCAGCTTACAACCAGCAACTCTGAGGGGATGGA...TCTCACTCTTTCTCTACCATAGGATCTGTCACCTAGTGACCAGTGCAGAGTCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109957.3 |
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| CDS GCA 90 bp | TACAAAGCCCTTGCCTTCTCCTTGAACTCTGCCAGGATCTGCAGGTaGTTTTCAACAACCATTGAATTGCCTGTGCTGATCTGTACCTGG | + |
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Preference number: 5 (lower is better) Translates to: YKALAFSLNSARICR*FSTTIELPVLICTW Trigger: CCAGGTACAGATCAGCACAGGCAATTCAATGGTTGTTGAAAAGCACCTGCAGATCCTGGCAGAGTTCAAGGAGAAGGCAAGGGCTTTGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109957.3 |
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| CDS GCA 90 bp | GTGTGGTACAAAGCCCTTGCCTTCTCCTTGAACTCTGCCAGGATCTaGAGGTGCTTTTCAACAACCATTGAATTGCCTGTGCTGATCTGT | + |
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Preference number: 5 (lower is better) Translates to: VWYKALAFSLNSARI*RCFSTTIELPVLIC Trigger: ACAGATCAGCACAGGCAATTCAATGGTTGTTGAAAAGCACCTGCAGATCCTGGCAGAGTTCAAGGAGAAGGCAAGGGCTTTGTACCACAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109957.3 |
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| CDS-3UTR CAA 90 bp | GTTCCAGATGCTGCCAATAGACACAGGGCAGCAAGTTCCCATCTTGTTCCTGAAGGGGTCTCTGTCAGATaGAACTTGAGACCTTCTAGA | + |
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Preference number: 5 (lower is better) Translates to: VPDAANRHRAASSHLVPEGVSVR*NLRPSR Trigger: TCTAGAAGGTCTCAAGTTCAATCTGACAGAGACCCC...TTCAGGAACAAGATGGGAACTTGCTGCCCTGTGTCTATTGGCAGCATCTGGAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109957.3 |
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| CDS CCA 90 bp | TCAGTGTTGATGGAGGCCAATGTAAGACTGTCCAGTTGTGTTTCATaGTCTCTGTCTTTCTGGACTGGAGTGTGCTTTCCTAATGTGTCC | + |
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Preference number: 5 (lower is better) Translates to: SVLMEANVRLSSCVS*SLSFWTGVCFPNVS Trigger: GGACACATTAGGAAAGCACACTCCAGTCCAGAAAGACAGAGACCATGAAACACAACTGGACAGTCTTACATTGGCCTCCATCAACACTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109957.3 |
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| CDS CCA 90 bp | TTTTGGATATGGAGAACTTGGGTAGGTAGAGCTCATCTATCATCCTaGGCCTCAAAGATTTCCTCCATCCCCTCAGAGTTGCTGGTTGTA | + |
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Preference number: 5 (lower is better) Translates to: FWIWRTWVGRAHLSS*ASKISSIPSELLVV Trigger: TACAACCAGCAACTCTGAGGGGATGGAGGAAATCTTTGAGGCCCAGGATGATAGATGAGCTCTACCTACCCAAGTTCTCCATATCCAAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109957.3 |
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| CDS CCA 90 bp | TACCCAGTTCTGGAAGGATGTTCTCCAGTCTGTAGTTTTTGGATATaGAGAACTTGGGTAGGTAGAGCTCATCTATCATCCTGGGCCTCA | + |
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Preference number: 5 (lower is better) Translates to: YPVLEGCSPVCSFWI*RTWVGRAHLSSWAS Trigger: TGAGGCCCAGGATGATAGATGAGCTCTACCTACCCAAGTTCTCCATATCCAAAAACTACAGACTGGAGAACATCCTTCCAGAACTGGGTA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109957.3 |
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| CDS-3UTR CAA 90 bp | GCCTTTTCATTTTGGGTGATGAAGGTGGAAGTGTCCATCTGTCCTGTGAGATCGAAGGCAAAGTCAGTGTaGATGGAGGCCAATGTAAGA | + |
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Preference number: 5 (lower is better) Translates to: AFSFWVMKVEVSICPVRSKAKSV*MEANVR Trigger: TCTTACATTGGCCTCCATCAACACTGACTTTGCCTT...CGATCTCACAGGACAGATGGACACTTCCACCTTCATCACCCAAAATGAAAAGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109957.3 |
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| CDS-3UTR CAA 90 bp | AACAAGAGTCACAGAGTGAGAGTGATAGTCTCTATGTCCCTGTTGTCACTAGTGAGTCATATTTGTCTCTaGTGGTGGCACGGGCTTCTG | + |
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Preference number: 5 (lower is better) Translates to: NKSHRVRVIVSMSLLSLVSHICL*WWHGLL Trigger: CAGAAGCCCGTGCCACCACAAGAGACAAATATGACT...CACTAGTGACAACAGGGACATAGAGACTATCACTCTCACTCTGTGACTCTTGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109957.3 |
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| CDS-3UTR CAA 90 bp | ACTTTCTGTGCAGGTATACGTTTATTCATCCTTTGCTCCTGCCTTTTCATTTTGGAGACTCTTACATCCTaGCCTCCTGAAATCCCTGAC | + |
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Preference number: 5 (lower is better) Translates to: TFCAGIRLFILCSCLFILETLTS*PPEIPD Trigger: GTCAGGGATTTCAGGAGGCAAGGATGTAAGAGTCTC...CAAAATGAAAAGGCAGGAGCAAAGGATGAATAAACGTATACCTGCACAGAAAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109957.3 |
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| CDS TCA 72 bp | GAATTGCCTGTGCTGATCTGTACCTGGTCCCCTGGCTaGCTGAGCCTCTGTAGGAGGTGCCCAAAGCCCTGG | + |
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Preference number: 6 (lower is better) Translates to: ELPVLICTWSPG*LSLCRRCPKPW Trigger: CCAGGGCTTTGGGCACCTCCTACAGAGGCTCAGTCAGCCAGGGGACCAGGTACAGATCAGCACAGGCAATTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109957.3 |
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| CDS CCA 72 bp | CGAGGCTGCTGGAAGTCTGCTGTGAAGACCTCAGTGTaGTACAAAGCCCTTGCCTTCTCCTTGAACTCTGCC | + |
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Preference number: 6 (lower is better) Translates to: RGCWKSAVKTSV*YKALAFSLNSA Trigger: GGCAGAGTTCAAGGAGAAGGCAAGGGCTTTGTACCACACTGAGGTCTTCACAGCAGACTTCCAGCAGCCTCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109957.3 |
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| CDS GCA 72 bp | GTCTGCTGTGAAGACCTCAGTGTGGTACAAAGCCCTTaGCTTCTCCTTGAACTCTGCCAGGATCTGCAGGTG | + |
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Preference number: 6 (lower is better) Translates to: VCCEDLSVVQSP*LLLELCQDLQV Trigger: CACCTGCAGATCCTGGCAGAGTTCAAGGAGAAGGCAAGGGCTTTGTACCACACTGAGGTCTTCACAGCAGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109957.3 |
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| CDS GCA 72 bp | CAGCGCTGTGAAACATCCGAGAGACTCTTACATCCTTaGCTCCTGAAATCCCTGACAGGTCAGCCTGTGTGG | + |
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Preference number: 6 (lower is better) Translates to: QRCETSERLLHP*LLKSLTGQPVW Trigger: CCACACAGGCTGACCTGTCAGGGATTTCAGGAGGCAAGGATGTAAGAGTCTCTCGGATGTTTCACAGCGCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109957.3 |
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| CDS TCA 72 bp | CTCTGCCAGGATCTGCAGGTGCTTTTCAACAACCATTaGATTGCCTGTGCTGATCTGTACCTGGTCCCCTGG | + |
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Preference number: 6 (lower is better) Translates to: LCQDLQVLFNNH*IACADLYLVPW Trigger: CCAGGGGACCAGGTACAGATCAGCACAGGCAATTCAATGGTTGTTGAAAAGCACCTGCAGATCCTGGCAGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109957.3 |
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| CDS CAA 90 bp | TGCCCAAAGCCCTGGTGGATGTCTGCCTCAGGGGTCTCTGTCAGATaGAACTTGAGACCTTCTAGAATCTCTTCCAGAGTGTTGCCCTTT | + |
|
Preference number: 6 (lower is better) Translates to: CPKPWWMSASGVSVR*NLRPSRISSRVLPF Trigger: AAAGGGCAACACTCTGGAAGAGATTCTAGAAGGTCTCAAGTTCAATCTGACAGAGACCCCTGAGGCAGACATCCACCAGGGCTTTGGGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109957.3 |
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| CDS TCA 72 bp | ATTCGTCATCACCATGGATGTCCTCTCCTCCAGGTCTaGGACCAGTTCCTTGATCATCCCCTGCGTCTGATT | + |
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Preference number: 6 (lower is better) Translates to: IRHHHGCPLLQV*DQFLDHPLRLI Trigger: AATCAGACGCAGGGGATGATCAAGGAACTGGTCTCAGACCTGGAGGAGAGGACATCCATGGTGATGACGAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109957.3 |
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| CDS CAA 72 bp | CCCTGGTGGATGTCTGCCTCAGGGGTCTCTGTCAGATaGAACTTGAGACCTTCTAGAATCTCTTCCAGAGTG | + |
|
Preference number: 6 (lower is better) Translates to: PWWMSASGVSVR*NLRPSRISSRV Trigger: CACTCTGGAAGAGATTCTAGAAGGTCTCAAGTTCAATCTGACAGAGACCCCTGAGGCAGACATCCACCAGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109957.3 |
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| CDS CCA 72 bp | TGGAGAACTTGGGTAGGTAGAGCTCATCTATCATCCTaGGCCTCAAAGATTTCCTCCATCCCCTCAGAGTTG | + |
|
Preference number: 6 (lower is better) Translates to: WRTWVGRAHLSS*ASKISSIPSEL Trigger: CAACTCTGAGGGGATGGAGGAAATCTTTGAGGCCCAGGATGATAGATGAGCTCTACCTACCCAAGTTCTCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109957.3 |
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| CDS CAA 72 bp | TGGATGTCTGCCTCAGGGGTCTCTGTCAGATTGAACTaGAGACCTTCTAGAATCTCTTCCAGAGTGTTGCCC | + |
|
Preference number: 6 (lower is better) Translates to: WMSASGVSVRLN*RPSRISSRVLP Trigger: GGGCAACACTCTGGAAGAGATTCTAGAAGGTCTCAAGTTCAATCTGACAGAGACCCCTGAGGCAGACATCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109957.3 |
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| CDS CAA 72 bp | AAGACCTCAGTGTGGTACAAAGCCCTTGCCTTCTCCTaGAACTCTGCCAGGATCTGCAGGTGCTTTTCAACA | + |
|
Preference number: 6 (lower is better) Translates to: KTSVWYKALAFS*NSARICRCFST Trigger: TGTTGAAAAGCACCTGCAGATCCTGGCAGAGTTCAAGGAGAAGGCAAGGGCTTTGTACCACACTGAGGTCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109957.3 |
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| CDS CAA 72 bp | ACTGTAGGGTTGCTTTTAGTGGACAGGAAGTCATATTaGTCTCTTGTGGTGGCACGGGCTTCTGTGCCTGTC | + |
|
Preference number: 6 (lower is better) Translates to: TVGLLLVDRKSY*SLVVARASVPV Trigger: GACAGGCACAGAAGCCCGTGCCACCACAAGAGACAAATATGACTTCCTGTCCACTAAAAGCAACCCTACAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109957.3 |
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| CDS CAA 90 bp | TCTGCTGTGAAGACCTCAGTGTGGTACAAAGCCCTTGCCTTCTCCTaGAACTCTGCCAGGATCTGCAGGTGCTTTTCAACAACCATTGAA | + |
|
Preference number: 6 (lower is better) Translates to: SAVKTSVWYKALAFS*NSARICRCFSTTIE Trigger: TTCAATGGTTGTTGAAAAGCACCTGCAGATCCTGGCAGAGTTCAAGGAGAAGGCAAGGGCTTTGTACCACACTGAGGTCTTCACAGCAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109957.3 |
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| CDS GCA 72 bp | TGTGTTTCATGGTCTCTGTCTTTCTGGACTGGAGTGTaGTTTCCTAATGTGTCCTCTGGACAGCAGAGGACA | + |
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Preference number: 6 (lower is better) Translates to: CVSWSLSFWTGV*FPNVSSGQQRT Trigger: TGTCCTCTGCTGTCCAGAGGACACATTAGGAAAGCACACTCCAGTCCAGAAAGACAGAGACCATGAAACACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109957.3 |
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| CDS GCA 72 bp | CTTGCCTTCTCCTTGAACTCTGCCAGGATCTGCAGGTaGTTTTCAACAACCATTGAATTGCCTGTGCTGATC | + |
|
Preference number: 6 (lower is better) Translates to: LAFSLNSARICR*FSTTIELPVLI Trigger: GATCAGCACAGGCAATTCAATGGTTGTTGAAAAGCACCTGCAGATCCTGGCAGAGTTCAAGGAGAAGGCAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109957.3 |
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| CDS GCA 72 bp | AAAGCCCTTGCCTTCTCCTTGAACTCTGCCAGGATCTaGAGGTGCTTTTCAACAACCATTGAATTGCCTGTG | + |
|
Preference number: 6 (lower is better) Translates to: KALAFSLNSARI*RCFSTTIELPV Trigger: CACAGGCAATTCAATGGTTGTTGAAAAGCACCTGCAGATCCTGGCAGAGTTCAAGGAGAAGGCAAGGGCTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109957.3 |
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| CDS CAA 90 bp | AGGTTAACAACTGTAGGGTTGCTTTTAGTGGACAGGAAGTCATATTaGTCTCTTGTGGTGGCACGGGCTTCTGTGCCTGTCTCAGTCATG | + |
|
Preference number: 6 (lower is better) Translates to: RLTTVGLLLVDRKSY*SLVVARASVPVSVM Trigger: CATGACTGAGACAGGCACAGAAGCCCGTGCCACCACAAGAGACAAATATGACTTCCTGTCCACTAAAAGCAACCCTACAGTTGTTAACCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109957.3 |
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| CDS CCA 72 bp | AGACTGTCCAGTTGTGTTTCATGGTCTCTGTCTTTCTaGACTGGAGTGTGCTTTCCTAATGTGTCCTCTGGA | + |
|
Preference number: 6 (lower is better) Translates to: RLSSCVSWSLSF*TGVCFPNVSSG Trigger: TCCAGAGGACACATTAGGAAAGCACACTCCAGTCCAGAAAGACAGAGACCATGAAACACAACTGGACAGTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109957.3 |
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| CDS CCA 72 bp | ATGGAGGCCAATGTAAGACTGTCCAGTTGTGTTTCATaGTCTCTGTCTTTCTGGACTGGAGTGTGCTTTCCT | + |
|
Preference number: 6 (lower is better) Translates to: MEANVRLSSCVS*SLSFWTGVCFP Trigger: AGGAAAGCACACTCCAGTCCAGAAAGACAGAGACCATGAAACACAACTGGACAGTCTTACATTGGCCTCCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109957.3 |
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| CDS CAA 72 bp | GTCAGTGTTGATGGAGGCCAATGTAAGACTGTCCAGTaGTGTTTCATGGTCTCTGTCTTTCTGGACTGGAGT | + |
|
Preference number: 6 (lower is better) Translates to: VSVDGGQCKTVQ*CFMVSVFLDWS Trigger: ACTCCAGTCCAGAAAGACAGAGACCATGAAACACAACTGGACAGTCTTACATTGGCCTCCATCAACACTGAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109957.3 |
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| CDS GCA 72 bp | CACAGTGCATTTCATTTTCTCATCCCGGAAGTAGGGTaGCCTCAGTTCCTTCATTTTCATCATGGACACCTT | + |
|
Preference number: 6 (lower is better) Translates to: HSAFHFLIPEVG*PQFLHFHHGHL Trigger: AAGGTGTCCATGATGAAAATGAAGGAACTGAGGGCACCCTACTTCCGGGATGAGAAAATGAAATGCACTGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109957.3 |
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| CDS CCA 72 bp | CTGGAAGGATGTTCTCCAGTCTGTAGTTTTTGGATATaGAGAACTTGGGTAGGTAGAGCTCATCTATCATCC | + |
|
Preference number: 6 (lower is better) Translates to: LEGCSPVCSFWI*RTWVGRAHLSS Trigger: GGATGATAGATGAGCTCTACCTACCCAAGTTCTCCATATCCAAAAACTACAGACTGGAGAACATCCTTCCAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109957.3 |
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| CDS CCA 72 bp | AGCCTGTGTGGAGAAGACTTCCTTGATACCCAGTTCTaGAAGGATGTTCTCCAGTCTGTAGTTTTTGGATAT | + |
|
Preference number: 6 (lower is better) Translates to: SLCGEDFLDTQF*KDVLQSVVFGY Trigger: ATATCCAAAAACTACAGACTGGAGAACATCCTTCCAGAACTGGGTATCAAGGAAGTCTTCTCCACACAGGCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109957.3 |
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| CDS CAA 90 bp | AAAACACAGAACAGGAATGGTGTGTTAAGGTTAACAACTGTAGGGTaGCTTTTAGTGGACAGGAAGTCATATTTGTCTCTTGTGGTGGCA | + |
|
Preference number: 6 (lower is better) Translates to: KTQNRNGVLRLTTVG*LLVDRKSYLSLVVA Trigger: TGCCACCACAAGAGACAAATATGACTTCCTGTCCACTAAAAGCAACCCTACAGTTGTTAACCTTAACACACCATTCCTGTTCTGTGTTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109957.3 |
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