Pregenerated sensors for SERPINA3G (Mus musculus)
Ensembl gene IDs: ENSMUSG00000041481Ensembl transcript IDs: ENSMUST00000043315.15, ENSMUST00000171916.8
Found 45 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CCATGCAGCTGCAGGGCTGAGATCTCCACCTGTGCCAGATCTGGGTaGGGCCAGGAGACTATGCAGGGGCTGAGGATAATTCTGCCCAGA | + |
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Preference number: 1 (lower is better) Translates to: PCSCRAEISTCARSG*GQETMQGLRIILPR Trigger: TCTGGGCAGAATTATCCTCAGCCCCTGCATAGTCTCCTGGCCCCACCCAGATCTGGCACAGGTGGAGATCTCAGCCCTGCAGCTGCATGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043315.15 |
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| 3UTR CCA 90 bp | GCTGAGGATAATTCTGCCCAGAGGAAGGCAAGCATAAGGCAGATCTaGGCACCAAGCATTTCAGATGCTGCAGATAGACCCAGGGCACCA | + |
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Preference number: 1 (lower is better) Translates to: AEDNSAQRKASIRQI*APSISDAADRPRAP Trigger: TGGTGCCCTGGGTCTATCTGCAGCATCTGAAATGCTTGGTGCCCAGATCTGCCTTATGCTTGCCTTCCTCTGGGCAGAATTATCCTCAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043315.15 |
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| 3UTR CCA 90 bp | GAGCCTCACTGCTGGGCCCAGGCTTTTGGGTTGAGGCAGATACAATaGAGACAGCAGGGAAAGGGAATAACACAAATTTCAGGTCAGGAA | + |
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Preference number: 1 (lower is better) Translates to: EPHCWAQAFGLRQIQ*RQQGKGITQISGQE Trigger: TTCCTGACCTGAAATTTGTGTTATTCCCTTTCCCTGCTGTCTCCATTGTATCTGCCTCAACCCAAAAGCCTGGGCCCAGCAGTGAGGCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043315.15 |
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| 3UTR CCA 90 bp | CAGATAGACCCAGGGCACCAGGTTCCTTTCTTAGTCCTTATGGGTTaGCCTGTAAACTTGCACAGTCCCATCATGACTGAAAGGATGAAG | + |
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Preference number: 1 (lower is better) Translates to: QIDPGHQVPFLVLMG*PVNLHSPIMTERMK Trigger: CTTCATCCTTTCAGTCATGATGGGACTGTGCAAGTTTACAGGCCAACCCATAAGGACTAAGAAAGGAACCTGGTGCCCTGGGTCTATCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043315.15 |
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| 3UTR TCA 90 bp | GAGACAGCAGGGAAAGGGAATAACACAAATTTCAGGTCAGGAACCTaGTTTCGTGATACCATCATGACAGAGAGTCTGACAATAACCAGC | + |
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Preference number: 1 (lower is better) Translates to: ETAGKGNNTNFRSGT*FRDTIMTESLTITS Trigger: GCTGGTTATTGTCAGACTCTCTGTCATGATGGTATCACGAAATCAGGTTCCTGACCTGAAATTTGTGTTATTCCCTTTCCCTGCTGTCTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043315.15 |
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| 3UTR-3UTR TCA 90 bp | CCATGCAGCTGCAGGGCTGAGATCTCCACCTGTGCCAGATCTGGGTGGGGCCAGCAGTCCCATCATGACTaGAAGGATGAAGGCAGACAT | + |
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Preference number: 2 (lower is better) Translates to: PCSCRAEISTCARSGWGQQSHHD*KDEGRH Trigger: ATGTCTGCCTTCATCCTTTCAGTCATGATGGGACTG...CTGGCCCCACCCAGATCTGGCACAGGTGGAGATCTCAGCCCTGCAGCTGCATGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043315.15 |
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| 3UTR CCA 72 bp | TGCAGGGCTGAGATCTCCACCTGTGCCAGATCTGGGTaGGGCCAGGAGACTATGCAGGGGCTGAGGATAATT | + |
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Preference number: 3 (lower is better) Translates to: CRAEISTCARSG*GQETMQGLRII Trigger: AATTATCCTCAGCCCCTGCATAGTCTCCTGGCCCCACCCAGATCTGGCACAGGTGGAGATCTCAGCCCTGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043315.15 |
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| 3UTR TCA 72 bp | GGAGAGAGCCTCACTGCTGGGCCCAGGCTTTTGGGTTaGGGCAGATACAATGGAGACAGCAGGGAAAGGGAA | + |
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Preference number: 3 (lower is better) Translates to: GESLTAGPRLLG*GRYNGDSRERE Trigger: TTCCCTTTCCCTGCTGTCTCCATTGTATCTGCCTCAACCCAAAAGCCTGGGCCCAGCAGTGAGGCTCTCTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043315.15 |
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| 3UTR CCA 72 bp | CCAGGGCACCAGGTTCCTTTCTTAGTCCTTATGGGTTaGCCTGTAAACTTGCACAGTCCCATCATGACTGAA | + |
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Preference number: 3 (lower is better) Translates to: PGHQVPFLVLMG*PVNLHSPIMTE Trigger: TTCAGTCATGATGGGACTGTGCAAGTTTACAGGCCAACCCATAAGGACTAAGAAAGGAACCTGGTGCCCTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043315.15 |
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| 3UTR TCA 72 bp | GGGTTGGCCTGTAAACTTGCACAGTCCCATCATGACTaGAAGGATGAAGGCAGACATAAGCAGAGCCTAAGT | + |
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Preference number: 3 (lower is better) Translates to: GLACKLAQSHHD*KDEGRHKQSLS Trigger: ACTTAGGCTCTGCTTATGTCTGCCTTCATCCTTTCAGTCATGATGGGACTGTGCAAGTTTACAGGCCAACCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043315.15 |
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| 3UTR GCA 72 bp | ATCCTTAGCTCCTGCCCTTTCAATTTGTGTGATGAATaGAGAGGTGTCCACCAGTCCTACGTAGTTGGTCAA | + |
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Preference number: 3 (lower is better) Translates to: ILSSCPFNLCDE*RGVHQSYVVGQ Trigger: TTGACCAACTACGTAGGACTGGTGGACACCTCTGCATTCATCACACAAATTGAAAGGGCAGGAGCTAAGGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043315.15 |
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| 3UTR TCA 72 bp | GGGAAAGGGAATAACACAAATTTCAGGTCAGGAACCTaGTTTCGTGATACCATCATGACAGAGAGTCTGACA | + |
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Preference number: 3 (lower is better) Translates to: GKGNNTNFRSGT*FRDTIMTESLT Trigger: TGTCAGACTCTCTGTCATGATGGTATCACGAAATCAGGTTCCTGACCTGAAATTTGTGTTATTCCCTTTCCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043315.15 |
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| CDS-3UTR GCA 90 bp | CCCCATGCAGCTGCAGGGCTGAGATCTCCACCTGTGCCAGATCTGGGTGGGGCCCAGCAGCAGCCTCTGTaGCTGTCTCAGCCACATCCA | + |
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Preference number: 4 (lower is better) Translates to: PHAAAGLRSPPVPDLGGAQQQPL*LSQPHP Trigger: TGGATGTGGCTGAGACAGGCACAGAGGCTGCTGCTG...GGCCCCACCCAGATCTGGCACAGGTGGAGATCTCAGCCCTGCAGCTGCATGGGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043315.15 |
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| CDS-3UTR CCA 90 bp | CCCCATGCAGCTGCAGGGCTGAGATCTCCACCTGTGCCAGATCTGGGTGGGGCCAACCAGTTTTCATCATaGACACAATCACAGACCTCT | + |
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Preference number: 4 (lower is better) Translates to: PHAAAGLRSPPVPDLGGANQFSS*TQSQTS Trigger: AGAGGTCTGTGATTGTGTCCATGATGAAAACTGGTT...GGCCCCACCCAGATCTGGCACAGGTGGAGATCTCAGCCCTGCAGCTGCATGGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000043315.15 |
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| CDS-3UTR GCA 90 bp | CCCCATGCAGCTGCAGGGCTGAGATCTCCACCTGTGCCAGATCTGGGTGGGGCCTGGATTTGTAACTTTTaGCATAAAGAGGGCAATGTG | + |
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Preference number: 4 (lower is better) Translates to: PHAAAGLRSPPVPDLGGAWICNF*HKEGNV Trigger: CACATTGCCCTCTTTATGGCAAAAGTTACAAATCCA...GGCCCCACCCAGATCTGGCACAGGTGGAGATCTCAGCCCTGCAGCTGCATGGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000043315.15 |
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| CDS-3UTR GCA 90 bp | GATACAATGGAGACAGCAGGGAAAGGGAATAACACAAATTTCAGGTCAGGAACCAAGCTTGCTTCCACCTaGTGCATCCTGCCCTGGTCA | + |
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Preference number: 4 (lower is better) Translates to: DTMETAGKGNNTNFRSGTKLAST*CILPWS Trigger: TGACCAGGGCAGGATGCAGCAGGTGGAAGCAAGCTT...GGTTCCTGACCTGAAATTTGTGTTATTCCCTTTCCCTGCTGTCTCCATTGTATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043315.15 |
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| CDS-3UTR CCA 90 bp | GGGTTGAGGCAGATACAATGGAGACAGCAGGGAAAGGGAATAACACAAATTTCACCAGGCTGTAGTCGGTaGAGATGGAGAACTTGGGCA | + |
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Preference number: 4 (lower is better) Translates to: GLRQIQWRQQGKGITQISPGCSR*RWRTWA Trigger: TGCCCAAGTTCTCCATCTCCACCGACTACAGCCTGG...TGAAATTTGTGTTATTCCCTTTCCCTGCTGTCTCCATTGTATCTGCCTCAACCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043315.15 |
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| CDS-3UTR CCA 90 bp | GTGGGGCCAGGAGACTATGCAGGGGCTGAGGATAATTCTGCCCAGAGGAAGGCAGTTCATAGATCTCTCTaGATTTGTAACTTTTGCCAT | + |
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Preference number: 4 (lower is better) Translates to: VGPGDYAGAEDNSAQRKAVHRSL*ICNFCH Trigger: ATGGCAAAAGTTACAAATCCAGAGAGATCTATGAAC...TGCCTTCCTCTGGGCAGAATTATCCTCAGCCCCTGCATAGTCTCCTGGCCCCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000043315.15 |
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| CDS-3UTR CCA 90 bp | GTCCTTATGGGTTGGCCTGTAAACTTGCACAGTCCCATCATGACTGAAAGGATGTTAGATTCCAGCCGTTaGGAAGAAGCACCCTCACCA | + |
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Preference number: 4 (lower is better) Translates to: VLMGWPVNLHSPIMTERMLDSSR*EEAPSP Trigger: TGGTGAGGGTGCTTCTTCCCAACGGCTGGAATCTAA...CATCCTTTCAGTCATGATGGGACTGTGCAAGTTTACAGGCCAACCCATAAGGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043315.15 |
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| CDS-3UTR GCA 90 bp | CCTGTAAACTTGCACAGTCCCATCATGACTGAAAGGATGAAGGCAGACATAAGCCAGAAAGTCAAAAACTaGACAACATCCGACACCTGC | + |
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Preference number: 4 (lower is better) Translates to: PVNLHSPIMTERMKADISQKVKN*TTSDTC Trigger: GCAGGTGTCGGATGTTGTGCAGTTTTTGACTTTCTG...GCTTATGTCTGCCTTCATCCTTTCAGTCATGATGGGACTGTGCAAGTTTACAGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043315.15 |
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| CDS-3UTR CCA 90 bp | GATACAATGGAGACAGCAGGGAAAGGGAATAACACAAATTTCAGGTCAGGAACCGCTCATGTATCATCCTaGGCTTCAGAGAGTTCTTCC | + |
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Preference number: 4 (lower is better) Translates to: DTMETAGKGNNTNFRSGTAHVSS*ASESSS Trigger: GGAAGAACTCTCTGAAGCCCAGGATGATACATGAGC...GGTTCCTGACCTGAAATTTGTGTTATTCCCTTTCCCTGCTGTCTCCATTGTATC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043315.15 |
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| CDS-3UTR CAA 90 bp | GGGTGGGGCCAGGAGACTATGCAGGGGCTGAGGATAATTCTGCCCAGAGGAAGGGTGGAGATGGAGAACTaGGGCAGGCGGAGCTCATGT | + |
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Preference number: 5 (lower is better) Translates to: GWGQETMQGLRIILPRGRVEMEN*GRRSSC Trigger: ACATGAGCTCCGCCTGCCCAAGTTCTCCATCTCCAC...CCTTCCTCTGGGCAGAATTATCCTCAGCCCCTGCATAGTCTCCTGGCCCCACCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043315.15 |
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| CDS TCA 90 bp | TCTGTGCCTGTCTCAGCCACATCCAGCACAGCCTTGTGGACCACCTaGGAGACTCTCAGATCCTTGGTTCCTGTGATTGCAGACAGGTCA | + |
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Preference number: 5 (lower is better) Translates to: SVPVSATSSTALWTT*ETLRSLVPVIADRS Trigger: TGACCTGTCTGCAATCACAGGAACCAAGGATCTGAGAGTCTCTCAGGTGGTCCACAAGGCTGTGCTGGATGTGGCTGAGACAGGCACAGA 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043315.15 |
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| CDS CCA 90 bp | CGGTGGAGATGGAGAACTTGGGCAGGCGGAGCTCATGTATCATCCTaGGCTTCAGAGAGTTCTTCCACTTCCTCAGGGTCTCTGGTTGTA | + |
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Preference number: 5 (lower is better) Translates to: RWRWRTWAGGAHVSS*ASESSSTSSGSLVV Trigger: TACAACCAGAGACCCTGAGGAAGTGGAAGAACTCTCTGAAGCCCAGGATGATACATGAGCTCCGCCTGCCCAAGTTCTCCATCTCCACCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043315.15 |
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| CDS GCA 90 bp | CTTGTGGACCACCTGAGAGACTCTCAGATCCTTGGTTCCTGTGATTaGAGACAGGTCAGCCTGTGTGGAGAAGACTTCCCTGATGCCCAA | + |
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Preference number: 5 (lower is better) Translates to: LVDHLRDSQILGSCD*RQVSLCGEDFPDAQ Trigger: TTGGGCATCAGGGAAGTCTTCTCCACACAGGCTGACCTGTCTGCAATCACAGGAACCAAGGATCTGAGAGTCTCTCAGGTGGTCCACAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043315.15 |
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| CDS GCA 90 bp | GAAAAATATTTCCAGAAAGTCAAAAACTGCACAACATCCGACACCTaGCATTCCTGTGGCAGCAGCAGCCTCTGTGCCTGTCTCAGCCAC | + |
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Preference number: 5 (lower is better) Translates to: EKYFQKVKNCTTSDT*HSCGSSSLCACLSH Trigger: GTGGCTGAGACAGGCACAGAGGCTGCTGCTGCCACAGGAATGGCAGGTGTCGGATGTTGTGCAGTTTTTGACTTTCTGGAAATATTTTTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000043315.15 |
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| CDS-3UTR CAA 90 bp | GGGTTGAGGCAGATACAATGGAGACAGCAGGGAAAGGGAATAACACAAATTTCACTTAGATTCCAGCCGTaGGGAAGAAGCACCCTCACC | + |
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Preference number: 5 (lower is better) Translates to: GLRQIQWRQQGKGITQISLRFQP*GRSTLT Trigger: GGTGAGGGTGCTTCTTCCCAACGGCTGGAATCTAAG...TGAAATTTGTGTTATTCCCTTTCCCTGCTGTCTCCATTGTATCTGCCTCAACCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043315.15 |
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| CDS GCA 90 bp | CATCAGGAATGGCCTGTTGAAAAATATTTCCAGAAAGTCAAAAACTaGACAACATCCGACACCTGCCATTCCTGTGGCAGCAGCAGCCTC | + |
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Preference number: 5 (lower is better) Translates to: HQEWPVEKYFQKVKN*TTSDTCHSCGSSSL Trigger: GAGGCTGCTGCTGCCACAGGAATGGCAGGTGTCGGATGTTGTGCAGTTTTTGACTTTCTGGAAATATTTTTCAACAGGCCATTCCTGATG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000043315.15 |
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| CDS CCA 90 bp | CCTCATCCCGGAAGTAGGGAGTTGTCAGGTAACCAGTTTTCATCATaGACACAATCACAGACCTCTTCTCATCCAAGTAGAACTCGGACT | + |
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Preference number: 5 (lower is better) Translates to: PHPGSRELSGNQFSS*TQSQTSSHPSRTRT Trigger: AGTCCGAGTTCTACTTGGATGAGAAGAGGTCTGTGATTGTGTCCATGATGAAAACTGGTTACCTGACAACTCCCTACTTCCGGGATGAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043315.15 ENSMUST00000171916.8 |
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| CDS-3UTR CAA 90 bp | CCAGGAGACTATGCAGGGGCTGAGGATAATTCTGCCCAGAGGAAGGCAAGCATAATCAGGAATGGCCTGTaGAAAAATATTTCCAGAAAG | + |
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Preference number: 5 (lower is better) Translates to: PGDYAGAEDNSAQRKASIIRNGL*KNISRK Trigger: CTTTCTGGAAATATTTTTCAACAGGCCATTCCTGAT...TATGCTTGCCTTCCTCTGGGCAGAATTATCCTCAGCCCCTGCATAGTCTCCTGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000043315.15 |
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| CDS CCA 90 bp | TTGGGAAGAAGCACCCTCACCATTTGGGAAGTTCATAGATCTCTCTaGATTTGTAACTTTTGCCATAAAGAGGGCAATGTGAGCTTTTGT | + |
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Preference number: 5 (lower is better) Translates to: LGRSTLTIWEVHRSL*ICNFCHKEGNVSFC Trigger: ACAAAAGCTCACATTGCCCTCTTTATGGCAAAAGTTACAAATCCAGAGAGATCTATGAACTTCCCAAATGGTGAGGGTGCTTCTTCCCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043315.15 |
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| CDS CCA 72 bp | CAGGAAGGATGTGCTCCAGGCTGTAGTCGGTGGAGATaGAGAACTTGGGCAGGCGGAGCTCATGTATCATCC | + |
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Preference number: 6 (lower is better) Translates to: QEGCAPGCSRWR*RTWAGGAHVSS Trigger: GGATGATACATGAGCTCCGCCTGCCCAAGTTCTCCATCTCCACCGACTACAGCCTGGAGCACATCCTTCCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043315.15 |
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| CDS CCA 72 bp | CCAACTCAGGAAGGATGTGCTCCAGGCTGTAGTCGGTaGAGATGGAGAACTTGGGCAGGCGGAGCTCATGTA | + |
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Preference number: 6 (lower is better) Translates to: PTQEGCAPGCSR*RWRTWAGGAHV Trigger: TACATGAGCTCCGCCTGCCCAAGTTCTCCATCTCCACCGACTACAGCCTGGAGCACATCCTTCCTGAGTTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043315.15 |
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| CDS TCA 72 bp | TTGCAGACAGGTCAGCCTGTGTGGAGAAGACTTCCCTaGTGCCCAACTCAGGAAGGATGTGCTCCAGGCTGT | + |
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Preference number: 6 (lower is better) Translates to: LQTGQPVWRRLP*CPTQEGCAPGC Trigger: ACAGCCTGGAGCACATCCTTCCTGAGTTGGGCATCAGGGAAGTCTTCTCCACACAGGCTGACCTGTCTGCAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043315.15 |
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| CDS CAA 72 bp | AGTTCTTCCACTTCCTCAGGGTCTCTGGTTGTAAGCTaGCTTCCACCTGCTGCATCCTGCCCTGGTCAGGGA | + |
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Preference number: 6 (lower is better) Translates to: SSSTSSGSLVVS*LPPAASCPGQG Trigger: TCCCTGACCAGGGCAGGATGCAGCAGGTGGAAGCAAGCTTACAACCAGAGACCCTGAGGAAGTGGAAGAACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043315.15 ENSMUST00000171916.8 |
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| CDS TCA 72 bp | GTCTCAGCCACATCCAGCACAGCCTTGTGGACCACCTaGGAGACTCTCAGATCCTTGGTTCCTGTGATTGCA | + |
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Preference number: 6 (lower is better) Translates to: VSATSSTALWTT*ETLRSLVPVIA Trigger: TGCAATCACAGGAACCAAGGATCTGAGAGTCTCTCAGGTGGTCCACAAGGCTGTGCTGGATGTGGCTGAGAC 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043315.15 |
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| CDS CCA 72 bp | TGGAGAACTTGGGCAGGCGGAGCTCATGTATCATCCTaGGCTTCAGAGAGTTCTTCCACTTCCTCAGGGTCT | + |
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Preference number: 6 (lower is better) Translates to: WRTWAGGAHVSS*ASESSSTSSGS Trigger: AGACCCTGAGGAAGTGGAAGAACTCTCTGAAGCCCAGGATGATACATGAGCTCCGCCTGCCCAAGTTCTCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043315.15 |
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| CDS GCA 72 bp | CACCTGAGAGACTCTCAGATCCTTGGTTCCTGTGATTaGAGACAGGTCAGCCTGTGTGGAGAAGACTTCCCT | + |
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Preference number: 6 (lower is better) Translates to: HLRDSQILGSCD*RQVSLCGEDFP Trigger: AGGGAAGTCTTCTCCACACAGGCTGACCTGTCTGCAATCACAGGAACCAAGGATCTGAGAGTCTCTCAGGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043315.15 |
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| CDS GCA 72 bp | TTCCAGAAAGTCAAAAACTGCACAACATCCGACACCTaGCATTCCTGTGGCAGCAGCAGCCTCTGTGCCTGT | + |
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Preference number: 6 (lower is better) Translates to: FQKVKNCTTSDT*HSCGSSSLCAC Trigger: ACAGGCACAGAGGCTGCTGCTGCCACAGGAATGGCAGGTGTCGGATGTTGTGCAGTTTTTGACTTTCTGGAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043315.15 |
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| CDS CAA 72 bp | CAGTGCAGGACAGCTCCTCATCCCGGAAGTAGGGAGTaGTCAGGTAACCAGTTTTCATCATGGACACAATCA | + |
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Preference number: 6 (lower is better) Translates to: QCRTAPHPGSRE*SGNQFSSWTQS Trigger: TGATTGTGTCCATGATGAAAACTGGTTACCTGACAACTCCCTACTTCCGGGATGAGGAGCTGTCCTGCACTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043315.15 ENSMUST00000171916.8 |
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| CDS CCA 72 bp | GGATCACCAAAACATAAACGCTTAGATTCCAGCCGTTaGGAAGAAGCACCCTCACCATTTGGGAAGTTCATA | + |
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Preference number: 6 (lower is better) Translates to: GSPKHKRLDSSR*EEAPSPFGKFI Trigger: TATGAACTTCCCAAATGGTGAGGGTGCTTCTTCCCAACGGCTGGAATCTAAGCGTTTATGTTTTGGTGATCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043315.15 |
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| CDS CCA 72 bp | GGAAGTAGGGAGTTGTCAGGTAACCAGTTTTCATCATaGACACAATCACAGACCTCTTCTCATCCAAGTAGA | + |
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Preference number: 6 (lower is better) Translates to: GSRELSGNQFSS*TQSQTSSHPSR Trigger: TCTACTTGGATGAGAAGAGGTCTGTGATTGTGTCCATGATGAAAACTGGTTACCTGACAACTCCCTACTTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043315.15 ENSMUST00000171916.8 |
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| CDS CCA 72 bp | AGCACCCTCACCATTTGGGAAGTTCATAGATCTCTCTaGATTTGTAACTTTTGCCATAAAGAGGGCAATGTG | + |
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Preference number: 6 (lower is better) Translates to: STLTIWEVHRSL*ICNFCHKEGNV Trigger: CACATTGCCCTCTTTATGGCAAAAGTTACAAATCCAGAGAGATCTATGAACTTCCCAAATGGTGAGGGTGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043315.15 |
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| CDS TCA 72 bp | TCTGGATTTGTAACTTTTGCCATAAAGAGGGCAATGTaGGCTTTTGTGTCAGAGATAATCATCAGGAATGGC | + |
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Preference number: 6 (lower is better) Translates to: SGFVTFAIKRAM*AFVSEIIIRNG Trigger: GCCATTCCTGATGATTATCTCTGACACAAAAGCTCACATTGCCCTCTTTATGGCAAAAGTTACAAATCCAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043315.15 |
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| CDS GCA 72 bp | TGGGAAGTTCATAGATCTCTCTGGATTTGTAACTTTTaGCATAAAGAGGGCAATGTGAGCTTTTGTGTCAGA | + |
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Preference number: 6 (lower is better) Translates to: WEVHRSLWICNF*HKEGNVSFCVR Trigger: TCTGACACAAAAGCTCACATTGCCCTCTTTATGGCAAAAGTTACAAATCCAGAGAGATCTATGAACTTCCCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043315.15 |
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