Pregenerated sensors for SERPINA3F (Mus musculus)
Ensembl gene IDs: ENSMUSG00000066363Ensembl transcript IDs: ENSMUST00000101080.2, ENSMUST00000121337.8, ENSMUST00000167049.8
Found 169 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CCATGCAGCTGCAGGGGTGAGGGCTCCACCTGTATCAGATCTGGGTaGGGCCAGGAGACTATGCAGGGACTGAGAATAGCTCTGCCCAGA | + |
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Preference number: 1 (lower is better) Translates to: PCSCRGEGSTCIRSG*GQETMQGLRIALPR Trigger: TCTGGGCAGAGCTATTCTCAGTCCCTGCATAGTCTCCTGGCCCCACCCAGATCTGATACAGGTGGAGCCCTCACCCCTGCAGCTGCATGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000101080.2 ENSMUST00000121337.8 ENSMUST00000167049.8 |
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| 3UTR TCA 90 bp | GAGACAGCAGGGACGGGGAATAACAAAAATTTCAGGTCAGGAACTTaGTTTAGTGCTACCATTATGACAGGGAGTCTGACAATAACCAGT | + |
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Preference number: 1 (lower is better) Translates to: ETAGTGNNKNFRSGT*FSATIMTGSLTITS Trigger: ACTGGTTATTGTCAGACTCCCTGTCATAATGGTAGCACTAAATCAAGTTCCTGACCTGAAATTTTTGTTATTCCCCGTCCCTGCTGTCTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000101080.2 ENSMUST00000121337.8 ENSMUST00000167049.8 |
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| 3UTR-3UTR TCA 90 bp | GGTGAGGGCTCCACCTGTATCAGATCTGGGTGGGGCCAGGAGACTATGCAGGGAAGGAGAGAGCCTCACTaGCGGTCCCAGTCTTTTGAG | + |
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Preference number: 2 (lower is better) Translates to: GEGSTCIRSGWGQETMQGRREPH*RSQSFE Trigger: CTCAAAAGACTGGGACCGTCAGTGAGGCTCTCTCCT...TCCCTGCATAGTCTCCTGGCCCCACCCAGATCTGATACAGGTGGAGCCCTCACC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000101080.2 ENSMUST00000121337.8 ENSMUST00000167049.8 |
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| 3UTR-3UTR CCA 90 bp | AGGAGTGCTAGGGGTAGAAGAACTACCCTGACCCACAGCCCCATGCAGCTGCAGCACCTGTATCAGATCTaGGTGGGGCCAGGAGACTAT | + |
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Preference number: 2 (lower is better) Translates to: RSARGRRTTLTHSPMQLQHLYQI*VGPGDY Trigger: ATAGTCTCCTGGCCCCACCCAGATCTGATACAGGTG...CTGCAGCTGCATGGGGCTGTGGGTCAGGGTAGTTCTTCTACCCCTAGCACTCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000101080.2 ENSMUST00000121337.8 ENSMUST00000167049.8 |
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| 3UTR-3UTR TCA 90 bp | TGCAGGGGTGAGGGCTCCACCTGTATCAGATCTGGGTGGGGCCAGGAGACTATGCCCAGTCTTTTGAGTTaGAGCAGATACAGTGGAGAC | + |
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Preference number: 2 (lower is better) Translates to: CRGEGSTCIRSGWGQETMPSLLS*SRYSGD Trigger: GTCTCCACTGTATCTGCTTCAACTCAAAAGACTGGG...CATAGTCTCCTGGCCCCACCCAGATCTGATACAGGTGGAGCCCTCACCCCTGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000101080.2 ENSMUST00000121337.8 ENSMUST00000167049.8 |
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| 3UTR-3UTR TCA 90 bp | GGCCAGGAGACTATGCAGGGACTGAGAATAGCTCTGCCCAGAGGAAGGCAAGAGCCCAGTCTTTTGAGTTaGAGCAGATACAGTGGAGAC | + |
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Preference number: 2 (lower is better) Translates to: GQETMQGLRIALPRGRQEPSLLS*SRYSGD Trigger: GTCTCCACTGTATCTGCTTCAACTCAAAAGACTGGG...CTCTTGCCTTCCTCTGGGCAGAGCTATTCTCAGTCCCTGCATAGTCTCCTGGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000101080.2 ENSMUST00000121337.8 ENSMUST00000167049.8 |
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| 3UTR-3UTR CCA 90 bp | CCAGGAGACTATGCAGGGACTGAGAATAGCTCTGCCCAGAGGAAGGCAAGAGTATTGAAGCAGATACAGTaGAGACAGCAGGGACGGGGA | + |
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Preference number: 2 (lower is better) Translates to: PGDYAGTENSSAQRKARVLKQIQ*RQQGRG Trigger: TCCCCGTCCCTGCTGTCTCCACTGTATCTGCTTCAA...TACTCTTGCCTTCCTCTGGGCAGAGCTATTCTCAGTCCCTGCATAGTCTCCTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000101080.2 ENSMUST00000121337.8 ENSMUST00000167049.8 |
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| 3UTR-3UTR TCA 90 bp | TGTGATGAAGGTGGAGGTGTCCATCTGTCTTGTGTGGTTGGTCAACTAGACACTGTAGAAGAACTACCCTaGCCCACAGCCCCATGCAGC | + |
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Preference number: 2 (lower is better) Translates to: CDEGGGVHLSCVVGQLDTVEELP*PTAPCS Trigger: GCTGCATGGGGCTGTGGGTCAGGGTAGTTCTTCTAC...AGTGTCTAGTTGACCAACCACACAAGACAGATGGACACCTCCACCTTCATCACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000101080.2 ENSMUST00000121337.8 ENSMUST00000167049.8 |
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| 3UTR-3UTR CCA 90 bp | TGTGATGAAGGTGGAGGTGTCCATCTGTCTTGTGTGGTTGGTCAACTAGACACTTTGAAGCAGATACAGTaGAGACAGCAGGGACGGGGA | + |
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Preference number: 2 (lower is better) Translates to: CDEGGGVHLSCVVGQLDTLKQIQ*RQQGRG Trigger: TCCCCGTCCCTGCTGTCTCCACTGTATCTGCTTCAA...AGTGTCTAGTTGACCAACCACACAAGACAGATGGACACCTCCACCTTCATCACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000101080.2 ENSMUST00000121337.8 ENSMUST00000167049.8 |
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| 3UTR-3UTR CCA 90 bp | AACCTTATGGGTTGGCCTGTAAACTTGTATAGTCCCATCATTACTGAAAAGCTGTTGAAGCAGATACAGTaGAGACAGCAGGGACGGGGA | + |
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Preference number: 2 (lower is better) Translates to: NLMGWPVNLYSPIITEKLLKQIQ*RQQGRG Trigger: TCCCCGTCCCTGCTGTCTCCACTGTATCTGCTTCAA...CAGCTTTTCAGTAATGATGGGACTATACAAGTTTACAGGCCAACCCATAAGGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000101080.2 ENSMUST00000121337.8 ENSMUST00000167049.8 |
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| 3UTR-3UTR TCA 90 bp | TGTGATGAAGGTGGAGGTGTCCATCTGTCTTGTGTGGTTGGTCAACTAGACACTTTCAGGTCAGGAACTTaGTTTAGTGCTACCATTATG | + |
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Preference number: 2 (lower is better) Translates to: CDEGGGVHLSCVVGQLDTFRSGT*FSATIM Trigger: CATAATGGTAGCACTAAATCAAGTTCCTGACCTGAA...AGTGTCTAGTTGACCAACCACACAAGACAGATGGACACCTCCACCTTCATCACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000101080.2 ENSMUST00000121337.8 ENSMUST00000167049.8 |
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| 3UTR CAA 90 bp | AATGCAGTTACATGTTTATTGATCCTTAGCTCCTGCCCTTTCAATTaGTGTGATGAAGGTGGAGGTGTCCATCTGTCTTGTGTGGTTGGT | + |
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Preference number: 2 (lower is better) Translates to: NAVTCLLILSSCPFN*CDEGGGVHLSCVVG Trigger: ACCAACCACACAAGACAGATGGACACCTCCACCTTCATCACACAAATTGAAAGGGCAGGAGCTAAGGATCAATAAACATGTAACTGCATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167049.8 |
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| 3UTR-3UTR TCA 90 bp | AACCTTATGGGTTGGCCTGTAAACTTGTATAGTCCCATCATTACTGAAAAGCTGTTCAGGTCAGGAACTTaGTTTAGTGCTACCATTATG | + |
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Preference number: 2 (lower is better) Translates to: NLMGWPVNLYSPIITEKLFRSGT*FSATIM Trigger: CATAATGGTAGCACTAAATCAAGTTCCTGACCTGAA...CAGCTTTTCAGTAATGATGGGACTATACAAGTTTACAGGCCAACCCATAAGGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000101080.2 ENSMUST00000121337.8 ENSMUST00000167049.8 |
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| 3UTR TCA 72 bp | GGAGAGAGCCTCACTGACGGTCCCAGTCTTTTGAGTTaGAGCAGATACAGTGGAGACAGCAGGGACGGGGAA | + |
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Preference number: 3 (lower is better) Translates to: GESLTDGPSLLS*SRYSGDSRDGE Trigger: TTCCCCGTCCCTGCTGTCTCCACTGTATCTGCTTCAACTCAAAAGACTGGGACCGTCAGTGAGGCTCTCTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000101080.2 ENSMUST00000121337.8 ENSMUST00000167049.8 |
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| 3UTR-3UTR CAA 90 bp | GGCTCCACCTGTATCAGATCTGGGTGGGGCCAGGAGACTATGCAGGGACTGAGATCCCAGTCTTTTGAGTaGAAGCAGATACAGTGGAGA | + |
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Preference number: 3 (lower is better) Translates to: GSTCIRSGWGQETMQGLRSQSFE*KQIQWR Trigger: TCTCCACTGTATCTGCTTCAACTCAAAAGACTGGGA...TCTCAGTCCCTGCATAGTCTCCTGGCCCCACCCAGATCTGATACAGGTGGAGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000101080.2 ENSMUST00000121337.8 ENSMUST00000167049.8 |
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| 3UTR-3UTR CAA 90 bp | GGCCAGGAGACTATGCAGGGACTGAGAATAGCTCTGCCCAGAGGAAGGCAAGAGTCCCAGTCTTTTGAGTaGAAGCAGATACAGTGGAGA | + |
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Preference number: 3 (lower is better) Translates to: GQETMQGLRIALPRGRQESQSFE*KQIQWR Trigger: TCTCCACTGTATCTGCTTCAACTCAAAAGACTGGGA...CTCTTGCCTTCCTCTGGGCAGAGCTATTCTCAGTCCCTGCATAGTCTCCTGGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000101080.2 ENSMUST00000121337.8 ENSMUST00000167049.8 |
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| 3UTR-3UTR CAA 90 bp | TGTGATGAAGGTGGAGGTGTCCATCTGTCTTGTGTGGTTGGTCAACTAGACACTTCCCAGTCTTTTGAGTaGAAGCAGATACAGTGGAGA | + |
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Preference number: 3 (lower is better) Translates to: CDEGGGVHLSCVVGQLDTSQSFE*KQIQWR Trigger: TCTCCACTGTATCTGCTTCAACTCAAAAGACTGGGA...AGTGTCTAGTTGACCAACCACACAAGACAGATGGACACCTCCACCTTCATCACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000101080.2 ENSMUST00000121337.8 ENSMUST00000167049.8 |
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| 3UTR GCA 72 bp | TTCAATGCAGTTACATGTTTATTGATCCTTAGCTCCTaGCCTTTCAATTTGTGTGATGAAGGTGGAGGTGTC | + |
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Preference number: 3 (lower is better) Translates to: FNAVTCLLILSS*PFNLCDEGGGV Trigger: GACACCTCCACCTTCATCACACAAATTGAAAGGGCAGGAGCTAAGGATCAATAAACATGTAACTGCATTGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167049.8 |
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| CDS-3UTR GCA 90 bp | CCATGCAGCTGCAGGGGTGAGGGCTCCACCTGTATCAGATCTGGGTGGGGCCAGCAGGGTGTTGCTCTTTaGTCCCAGGGACAGCAGGGC | + |
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Preference number: 4 (lower is better) Translates to: PCSCRGEGSTCIRSGWGQQGVAL*SQGQQG Trigger: GCCCTGCTGTCCCTGGGAGCAAAGAGCAACACCCTG...CTGGCCCCACCCAGATCTGATACAGGTGGAGCCCTCACCCCTGCAGCTGCATGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000101080.2 ENSMUST00000121337.8 ENSMUST00000167049.8 |
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| CDS-3UTR GCA 90 bp | CCATGCAGCTGCAGGGGTGAGGGCTCCACCTGTATCAGATCTGGGTGGGGCCAGAAGCTGGCTTCCACCTaGTGCATCTTGCCCTGGTCC | + |
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Preference number: 4 (lower is better) Translates to: PCSCRGEGSTCIRSGWGQKLAST*CILPWS Trigger: GGACCAGGGCAAGATGCAGCAGGTGGAAGCCAGCTT...CTGGCCCCACCCAGATCTGATACAGGTGGAGCCCTCACCCCTGCAGCTGCATGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000101080.2 ENSMUST00000121337.8 ENSMUST00000167049.8 |
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| CDS-3UTR GCA 90 bp | AGGAGTGCTAGGGGTAGAAGAACTACCCTGACCCACAGCCCCATGCAGCTGCAGCTGGCTTCCACCTGCTaGATCTTGCCCTGGTCCGGG | + |
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Preference number: 4 (lower is better) Translates to: RSARGRRTTLTHSPMQLQLASTC*ILPWSG Trigger: CCCGGACCAGGGCAAGATGCAGCAGGTGGAAGCCAG...CTGCAGCTGCATGGGGCTGTGGGTCAGGGTAGTTCTTCTACCCCTAGCACTCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000101080.2 ENSMUST00000121337.8 ENSMUST00000167049.8 |
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| CDS-3UTR CCA 90 bp | GGTGAGGGCTCCACCTGTATCAGATCTGGGTGGGGCCAGGAGACTATGCAGGGAGCAGACAGGTCAGCCTaGGTGGAGAAGAGCTCCCTG | + |
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Preference number: 4 (lower is better) Translates to: GEGSTCIRSGWGQETMQGADRSA*VEKSSL Trigger: CAGGGAGCTCTTCTCCACCCAGGCTGACCTGTCTGC...TCCCTGCATAGTCTCCTGGCCCCACCCAGATCTGATACAGGTGGAGCCCTCACC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000101080.2 ENSMUST00000121337.8 ENSMUST00000167049.8 |
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| CDS-3UTR CCA 90 bp | TGCAGGGGTGAGGGCTCCACCTGTATCAGATCTGGGTGGGGCCAGGAGACTATGGCAGACAGGTCAGCCTaGGTGGAGAAGAGCTCCCTG | + |
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Preference number: 4 (lower is better) Translates to: CRGEGSTCIRSGWGQETMADRSA*VEKSSL Trigger: CAGGGAGCTCTTCTCCACCCAGGCTGACCTGTCTGC...CATAGTCTCCTGGCCCCACCCAGATCTGATACAGGTGGAGCCCTCACCCCTGCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000101080.2 ENSMUST00000121337.8 ENSMUST00000167049.8 |
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| CDS-3UTR TCA 90 bp | GTGGGGCCAGGAGACTATGCAGGGACTGAGAATAGCTCTGCCCAGAGGAAGGCAGGGCACTGCCTGTGCTaGTCTGTACCTGGTTCCCTG | + |
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Preference number: 4 (lower is better) Translates to: VGPGDYAGTENSSAQRKAGHCLC*SVPGSL Trigger: CAGGGAACCAGGTACAGATCAGCACAGGCAGTGCCC...TGCCTTCCTCTGGGCAGAGCTATTCTCAGTCCCTGCATAGTCTCCTGGCCCCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000101080.2 ENSMUST00000121337.8 ENSMUST00000167049.8 |
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| CDS-3UTR GCA 90 bp | GGCCAGGAGACTATGCAGGGACTGAGAATAGCTCTGCCCAGAGGAAGGCAAGAGCTGGCTTCCACCTGCTaGATCTTGCCCTGGTCCGGG | + |
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Preference number: 4 (lower is better) Translates to: GQETMQGLRIALPRGRQELASTC*ILPWSG Trigger: CCCGGACCAGGGCAAGATGCAGCAGGTGGAAGCCAG...CTCTTGCCTTCCTCTGGGCAGAGCTATTCTCAGTCCCTGCATAGTCTCCTGGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000101080.2 ENSMUST00000121337.8 ENSMUST00000167049.8 |
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| CDS-3UTR GCA 90 bp | GGTGAGGGCTCCACCTGTATCAGATCTGGGTGGGGCCAGGAGACTATGCAGGGAAAGCTGGCTTCCACCTaGTGCATCTTGCCCTGGTCC | + |
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Preference number: 4 (lower is better) Translates to: GEGSTCIRSGWGQETMQGKLAST*CILPWS Trigger: GGACCAGGGCAAGATGCAGCAGGTGGAAGCCAGCTT...TCCCTGCATAGTCTCCTGGCCCCACCCAGATCTGATACAGGTGGAGCCCTCACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000101080.2 ENSMUST00000121337.8 ENSMUST00000167049.8 |
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| CDS-3UTR GCA 90 bp | TGCAGGGGTGAGGGCTCCACCTGTATCAGATCTGGGTGGGGCCAGGAGACTATGCTCAGGGTCTCTGGTTaGAAGCTGGCTTCCACCTGC | + |
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Preference number: 4 (lower is better) Translates to: CRGEGSTCIRSGWGQETMLRVSG*KLASTC Trigger: GCAGGTGGAAGCCAGCTTGCAACCAGAGACCCTGAG...CATAGTCTCCTGGCCCCACCCAGATCTGATACAGGTGGAGCCCTCACCCCTGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000101080.2 ENSMUST00000121337.8 ENSMUST00000167049.8 |
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| CDS-3UTR GCA 90 bp | TGCAGGGGTGAGGGCTCCACCTGTATCAGATCTGGGTGGGGCCAGGAGACTATGTCCTGTGCCAGCAGCTaGTTCTGTGCCTGTCTCAGC | + |
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Preference number: 4 (lower is better) Translates to: CRGEGSTCIRSGWGQETMSCASS*FCACLS Trigger: GCTGAGACAGGCACAGAAGCAGCTGCTGGCACAGGA...CATAGTCTCCTGGCCCCACCCAGATCTGATACAGGTGGAGCCCTCACCCCTGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000101080.2 ENSMUST00000121337.8 ENSMUST00000167049.8 |
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| CDS-3UTR GCA 90 bp | GGTGAGGGCTCCACCTGTATCAGATCTGGGTGGGGCCAGGAGACTATGCAGGGATCCTGTGCCAGCAGCTaGTTCTGTGCCTGTCTCAGC | + |
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Preference number: 4 (lower is better) Translates to: GEGSTCIRSGWGQETMQGSCASS*FCACLS Trigger: GCTGAGACAGGCACAGAAGCAGCTGCTGGCACAGGA...TCCCTGCATAGTCTCCTGGCCCCACCCAGATCTGATACAGGTGGAGCCCTCACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000101080.2 ENSMUST00000121337.8 ENSMUST00000167049.8 |
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| CDS-3UTR CCA 90 bp | TGCAGGGGTGAGGGCTCCACCTGTATCAGATCTGGGTGGGGCCAGGAGACTATGGCCTCGAGAGGCTGCTaGAAATCTGCTGTGAAGGCC | + |
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Preference number: 4 (lower is better) Translates to: CRGEGSTCIRSGWGQETMASRGC*KSAVKA Trigger: GGCCTTCACAGCAGATTTCCAGCAGCCTCTCGAGGC...CATAGTCTCCTGGCCCCACCCAGATCTGATACAGGTGGAGCCCTCACCCCTGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000101080.2 ENSMUST00000121337.8 ENSMUST00000167049.8 |
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| CDS-3UTR GCA 90 bp | TGCAGGGGTGAGGGCTCCACCTGTATCAGATCTGGGTGGGGCCAGGAGACTATGAGGCTGCTGGAAATCTaGTGTGAAGGCCTCAGCCTG | + |
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Preference number: 4 (lower is better) Translates to: CRGEGSTCIRSGWGQETMRLLEI*CEGLSL Trigger: CAGGCTGAGGCCTTCACAGCAGATTTCCAGCAGCCT...CATAGTCTCCTGGCCCCACCCAGATCTGATACAGGTGGAGCCCTCACCCCTGCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000101080.2 ENSMUST00000121337.8 ENSMUST00000167049.8 |
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| CDS-3UTR GCA 90 bp | GTGGGGCCAGGAGACTATGCAGGGACTGAGAATAGCTCTGCCCAGAGGAAGGCACTCAGGGTCTCTGGTTaGAAGCTGGCTTCCACCTGC | + |
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Preference number: 4 (lower is better) Translates to: VGPGDYAGTENSSAQRKALRVSG*KLASTC Trigger: GCAGGTGGAAGCCAGCTTGCAACCAGAGACCCTGAG...TGCCTTCCTCTGGGCAGAGCTATTCTCAGTCCCTGCATAGTCTCCTGGCCCCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000101080.2 ENSMUST00000121337.8 ENSMUST00000167049.8 |
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| CDS-3UTR CCA 90 bp | GTGGGGCCAGGAGACTATGCAGGGACTGAGAATAGCTCTGCCCAGAGGAAGGCATCCCAGGGTGACATCTaGGCAGCCAAAGACAGCAGG | + |
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Preference number: 4 (lower is better) Translates to: VGPGDYAGTENSSAQRKASQGDI*AAKDSR Trigger: CCTGCTGTCTTTGGCTGCCCAGATGTCACCCTGGGA...TGCCTTCCTCTGGGCAGAGCTATTCTCAGTCCCTGCATAGTCTCCTGGCCCCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000101080.2 ENSMUST00000121337.8 ENSMUST00000167049.8 |
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| CDS-3UTR CCA 90 bp | TGCAGGGGTGAGGGCTCCACCTGTATCAGATCTGGGTGGGGCCAGGAGACTATGGTGAAGGCCTCAGCCTaGTACAGAGCCCTTGCTTTC | + |
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Preference number: 4 (lower is better) Translates to: CRGEGSTCIRSGWGQETMVKASA*YRALAF Trigger: GAAAGCAAGGGCTCTGTACCAGGCTGAGGCCTTCAC...CATAGTCTCCTGGCCCCACCCAGATCTGATACAGGTGGAGCCCTCACCCCTGCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000101080.2 ENSMUST00000121337.8 ENSMUST00000167049.8 |
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| CDS-3UTR CCA 90 bp | GTGGGGCCAGGAGACTATGCAGGGACTGAGAATAGCTCTGCCCAGAGGAAGGCAGCCTCGAGAGGCTGCTaGAAATCTGCTGTGAAGGCC | + |
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Preference number: 4 (lower is better) Translates to: VGPGDYAGTENSSAQRKAASRGC*KSAVKA Trigger: GGCCTTCACAGCAGATTTCCAGCAGCCTCTCGAGGC...TGCCTTCCTCTGGGCAGAGCTATTCTCAGTCCCTGCATAGTCTCCTGGCCCCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000101080.2 ENSMUST00000121337.8 ENSMUST00000167049.8 |
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| CDS-3UTR CCA 90 bp | GGCCAGGAGACTATGCAGGGACTGAGAATAGCTCTGCCCAGAGGAAGGCAAGAGGCAGACAGGTCAGCCTaGGTGGAGAAGAGCTCCCTG | + |
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Preference number: 4 (lower is better) Translates to: GQETMQGLRIALPRGRQEADRSA*VEKSSL Trigger: CAGGGAGCTCTTCTCCACCCAGGCTGACCTGTCTGC...CTCTTGCCTTCCTCTGGGCAGAGCTATTCTCAGTCCCTGCATAGTCTCCTGGCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000101080.2 ENSMUST00000121337.8 ENSMUST00000167049.8 |
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| CDS-3UTR CCA 90 bp | TGCAGGGGTGAGGGCTCCACCTGTATCAGATCTGGGTGGGGCCAGGAGACTATGTACCTAAAGCCCTGGTaGATGTCTGGTTCAGGGGTC | + |
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Preference number: 4 (lower is better) Translates to: CRGEGSTCIRSGWGQETMYLKPW*MSGSGV Trigger: GACCCCTGAACCAGACATCCACCAGGGCTTTAGGTA...CATAGTCTCCTGGCCCCACCCAGATCTGATACAGGTGGAGCCCTCACCCCTGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000101080.2 ENSMUST00000121337.8 ENSMUST00000167049.8 |
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| CDS-3UTR TCA 90 bp | GGCCAGGAGACTATGCAGGGACTGAGAATAGCTCTGCCCAGAGGAAGGCAAGAGTGTTCCTTCCCAGGGTaGCATCTGGGCAGCCAAAGA | + |
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Preference number: 4 (lower is better) Translates to: GQETMQGLRIALPRGRQECSFPG*HLGSQR Trigger: TCTTTGGCTGCCCAGATGTCACCCTGGGAAGGAACA...CTCTTGCCTTCCTCTGGGCAGAGCTATTCTCAGTCCCTGCATAGTCTCCTGGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000101080.2 ENSMUST00000121337.8 ENSMUST00000167049.8 |
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| CDS-3UTR TCA 90 bp | TGCAGGGGTGAGGGCTCCACCTGTATCAGATCTGGGTGGGGCCAGGAGACTATGAGGCAGTGCAGATGCTaGATGGGGAGAAGACAACAT | + |
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Preference number: 4 (lower is better) Translates to: CRGEGSTCIRSGWGQETMRQCRC*MGRRQH Trigger: ATGTTGTCTTCTCCCCATTCAGCATCTGCACTGCCT...CATAGTCTCCTGGCCCCACCCAGATCTGATACAGGTGGAGCCCTCACCCCTGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000101080.2 ENSMUST00000121337.8 ENSMUST00000167049.8 |
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| CDS-3UTR TCA 90 bp | GGCTCCACCTGTATCAGATCTGGGTGGGGCCAGGAGACTATGCAGGGACTGAGAGCCTTGTGGACCACCTaGGAAGTTCTCAGATCCTTG | + |
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Preference number: 4 (lower is better) Translates to: GSTCIRSGWGQETMQGLRALWTT*EVLRSL Trigger: CAAGGATCTGAGAACTTCTCAGGTGGTCCACAAGGC...TCTCAGTCCCTGCATAGTCTCCTGGCCCCACCCAGATCTGATACAGGTGGAGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000101080.2 ENSMUST00000121337.8 ENSMUST00000167049.8 |
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| CDS-3UTR GCA 90 bp | GGGTTAGGCGACTTCTCTGTCCTGATTAGGAGTGCTAGGGGTAGAAGAACTACCCTGGCTTCCACCTGCTaGATCTTGCCCTGGTCCGGG | + |
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Preference number: 4 (lower is better) Translates to: GLGDFSVLIRSARGRRTTLASTC*ILPWSG Trigger: CCCGGACCAGGGCAAGATGCAGCAGGTGGAAGCCAG...GGTAGTTCTTCTACCCCTAGCACTCCTAATCAGGACAGAGAAGTCGCCTAACCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000101080.2 ENSMUST00000121337.8 ENSMUST00000167049.8 |
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| CDS-3UTR GCA 90 bp | GGCTCCACCTGTATCAGATCTGGGTGGGGCCAGGAGACTATGCAGGGACTGAGACTTGGTTCCTGTGATTaGAGACAGGTCAGCCTGGGT | + |
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Preference number: 4 (lower is better) Translates to: GSTCIRSGWGQETMQGLRLGSCD*RQVSLG Trigger: ACCCAGGCTGACCTGTCTGCAATCACAGGAACCAAG...TCTCAGTCCCTGCATAGTCTCCTGGCCCCACCCAGATCTGATACAGGTGGAGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000101080.2 ENSMUST00000121337.8 ENSMUST00000167049.8 |
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| CDS-3UTR TCA 90 bp | GGGTTAGGCGACTTCTCTGTCCTGATTAGGAGTGCTAGGGGTAGAAGAACTACCGGGCACTGCCTGTGCTaGTCTGTACCTGGTTCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: GLGDFSVLIRSARGRRTTGHCLC*SVPGSL Trigger: CAGGGAACCAGGTACAGATCAGCACAGGCAGTGCCC...GGTAGTTCTTCTACCCCTAGCACTCCTAATCAGGACAGAGAAGTCGCCTAACCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000101080.2 ENSMUST00000121337.8 ENSMUST00000167049.8 |
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| CDS-3UTR GCA 90 bp | AGGAGTGCTAGGGGTAGAAGAACTACCCTGACCCACAGCCCCATGCAGCTGCAGTTTCCTTCAGGGTGTTaGTCTTTGCTCCCAGGGACA | + |
|
Preference number: 4 (lower is better) Translates to: RSARGRRTTLTHSPMQLQFPSGC*SLLPGT Trigger: TGTCCCTGGGAGCAAAGAGCAACACCCTGAAGGAAA...CTGCAGCTGCATGGGGCTGTGGGTCAGGGTAGTTCTTCTACCCCTAGCACTCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000101080.2 ENSMUST00000121337.8 ENSMUST00000167049.8 |
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| CDS-3UTR GCA 90 bp | GGTGAGGGCTCCACCTGTATCAGATCTGGGTGGGGCCAGGAGACTATGCAGGGAGCCAGGATCTGCAGGTaGTTTTCAATAAACAGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: GEGSTCIRSGWGQETMQGARICR*FSINRA Trigger: TGCCCTGTTTATTGAAAAGCACCTGCAGATCCTGGC...TCCCTGCATAGTCTCCTGGCCCCACCCAGATCTGATACAGGTGGAGCCCTCACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000101080.2 ENSMUST00000121337.8 ENSMUST00000167049.8 |
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| CDS-3UTR GCA 90 bp | GGCTCCACCTGTATCAGATCTGGGTGGGGCCAGGAGACTATGCAGGGACTGAGACTGGTACAGAGCCCTTaGTTTCTCCTTGAACTCTGC | + |
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Preference number: 4 (lower is better) Translates to: GSTCIRSGWGQETMQGLRLVQSP*FLLELC Trigger: GCAGAGTTCAAGGAGAAAGCAAGGGCTCTGTACCAG...TCTCAGTCCCTGCATAGTCTCCTGGCCCCACCCAGATCTGATACAGGTGGAGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000101080.2 ENSMUST00000121337.8 ENSMUST00000167049.8 |
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| CDS-3UTR GCA 90 bp | AGGAGTGCTAGGGGTAGAAGAACTACCCTGACCCACAGCCCCATGCAGCTGCAGCTGGTACAGAGCCCTTaGTTTCTCCTTGAACTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: RSARGRRTTLTHSPMQLQLVQSP*FLLELC Trigger: GCAGAGTTCAAGGAGAAAGCAAGGGCTCTGTACCAG...CTGCAGCTGCATGGGGCTGTGGGTCAGGGTAGTTCTTCTACCCCTAGCACTCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000101080.2 ENSMUST00000121337.8 ENSMUST00000167049.8 |
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| CDS-3UTR CCA 90 bp | CCAGGAGACTATGCAGGGACTGAGAATAGCTCTGCCCAGAGGAAGGCAAGAGTAGCCTCGAGAGGCTGCTaGAAATCTGCTGTGAAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: PGDYAGTENSSAQRKARVASRGC*KSAVKA Trigger: GGCCTTCACAGCAGATTTCCAGCAGCCTCTCGAGGC...TACTCTTGCCTTCCTCTGGGCAGAGCTATTCTCAGTCCCTGCATAGTCTCCTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000101080.2 ENSMUST00000121337.8 ENSMUST00000167049.8 |
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| CDS-3UTR GCA 90 bp | GGCTCCACCTGTATCAGATCTGGGTGGGGCCAGGAGACTATGCAGGGACTGAGAAGGCAAAGTCAGTGTTaGTGGAGGCCAGTGTTAAAC | + |
|
Preference number: 4 (lower is better) Translates to: GSTCIRSGWGQETMQGLRRQSQC*WRPVLN Trigger: GTTTAACACTGGCCTCCAGCAACACTGACTTTGCCT...TCTCAGTCCCTGCATAGTCTCCTGGCCCCACCCAGATCTGATACAGGTGGAGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000101080.2 ENSMUST00000121337.8 ENSMUST00000167049.8 |
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| CDS-3UTR GCA 90 bp | CCAGGAGACTATGCAGGGACTGAGAATAGCTCTGCCCAGAGGAAGGCAAGAGTAAGGCTGCTGGAAATCTaGTGTGAAGGCCTCAGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: PGDYAGTENSSAQRKARVRLLEI*CEGLSL Trigger: CAGGCTGAGGCCTTCACAGCAGATTTCCAGCAGCCT...TACTCTTGCCTTCCTCTGGGCAGAGCTATTCTCAGTCCCTGCATAGTCTCCTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000101080.2 ENSMUST00000121337.8 ENSMUST00000167049.8 |
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| CDS-3UTR CCA 90 bp | GGTGAGGGCTCCACCTGTATCAGATCTGGGTGGGGCCAGGAGACTATGCAGGGACAAAGTCAGTGTTGCTaGAGGCCAGTGTTAAACTGT | + |
|
Preference number: 4 (lower is better) Translates to: GEGSTCIRSGWGQETMQGQSQCC*RPVLNC Trigger: ACAGTTTAACACTGGCCTCCAGCAACACTGACTTTG...TCCCTGCATAGTCTCCTGGCCCCACCCAGATCTGATACAGGTGGAGCCCTCACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000101080.2 ENSMUST00000121337.8 ENSMUST00000167049.8 |
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| CDS-3UTR CCA 90 bp | GGGTTAGGCGACTTCTCTGTCCTGATTAGGAGTGCTAGGGGTAGAAGAACTACCGCCCTGGTGGATGTCTaGTTCAGGGGTCTCTGTGAG | + |
|
Preference number: 4 (lower is better) Translates to: GLGDFSVLIRSARGRRTTALVDV*FRGLCE Trigger: CTCACAGAGACCCCTGAACCAGACATCCACCAGGGC...GGTAGTTCTTCTACCCCTAGCACTCCTAATCAGGACAGAGAAGTCGCCTAACCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000101080.2 ENSMUST00000121337.8 ENSMUST00000167049.8 |
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| CDS-3UTR CCA 90 bp | GTGGGGCCAGGAGACTATGCAGGGACTGAGAATAGCTCTGCCCAGAGGAAGGCATGGAGATGGAGAACTTaGGCAGGCAGAGCTCATTTA | + |
|
Preference number: 4 (lower is better) Translates to: VGPGDYAGTENSSAQRKAWRWRT*AGRAHL Trigger: TAAATGAGCTCTGCCTGCCCAAGTTCTCCATCTCCA...TGCCTTCCTCTGGGCAGAGCTATTCTCAGTCCCTGCATAGTCTCCTGGCCCCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000101080.2 ENSMUST00000121337.8 ENSMUST00000167049.8 |
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| CDS-3UTR TCA 90 bp | GGGTTAGGCGACTTCTCTGTCCTGATTAGGAGTGCTAGGGGTAGAAGAACTACCGCTGGAAATCTGCTGTaGAGGCCTCAGCCTGGTACA | + |
|
Preference number: 4 (lower is better) Translates to: GLGDFSVLIRSARGRRTTAGNLL*RPQPGT Trigger: TGTACCAGGCTGAGGCCTTCACAGCAGATTTCCAGC...GGTAGTTCTTCTACCCCTAGCACTCCTAATCAGGACAGAGAAGTCGCCTAACCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000101080.2 ENSMUST00000121337.8 ENSMUST00000167049.8 |
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| CDS-3UTR TCA 90 bp | CCATGCAGCTGCAGGGGTGAGGGCTCCACCTGTATCAGATCTGGGTGGGGCCAGATCACTCTCTGGATTTaGAACTTTTGCCATAAAGAG | + |
|
Preference number: 4 (lower is better) Translates to: PCSCRGEGSTCIRSGWGQITLWI*NFCHKE Trigger: CTCTTTATGGCAAAAGTTTCAAATCCAGAGAGTGAT...CTGGCCCCACCCAGATCTGATACAGGTGGAGCCCTCACCCCTGCAGCTGCATGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000101080.2 ENSMUST00000121337.8 ENSMUST00000167049.8 |
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| CDS-3UTR GCA 90 bp | TGTGATGAAGGTGGAGGTGTCCATCTGTCTTGTGTGGTTGGTCAACTAGACACTCAGGGTGTTGCTCTTTaGTCCCAGGGACAGCAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: CDEGGGVHLSCVVGQLDTQGVAL*SQGQQG Trigger: GCCCTGCTGTCCCTGGGAGCAAAGAGCAACACCCTG...AGTGTCTAGTTGACCAACCACACAAGACAGATGGACACCTCCACCTTCATCACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000101080.2 ENSMUST00000121337.8 ENSMUST00000167049.8 |
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| CDS-3UTR GCA 90 bp | TGCAGGGGTGAGGGCTCCACCTGTATCAGATCTGGGTGGGGCCAGGAGACTATGAACTCTGCCAGGATCTaGAGGTGCTTTTCAATAAAC | + |
|
Preference number: 4 (lower is better) Translates to: CRGEGSTCIRSGWGQETMNSARI*RCFSIN Trigger: GTTTATTGAAAAGCACCTGCAGATCCTGGCAGAGTT...CATAGTCTCCTGGCCCCACCCAGATCTGATACAGGTGGAGCCCTCACCCCTGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000101080.2 ENSMUST00000121337.8 ENSMUST00000167049.8 |
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| CDS-3UTR GCA 90 bp | GGGTTAGGCGACTTCTCTGTCCTGATTAGGAGTGCTAGGGGTAGAAGAACTACCCAGCAGCTGCTTCTGTaGCTGTCTCAGCCACATCCA | + |
|
Preference number: 4 (lower is better) Translates to: GLGDFSVLIRSARGRRTTQQLLL*LSQPHP Trigger: TGGATGTGGCTGAGACAGGCACAGAAGCAGCTGCTG...GGTAGTTCTTCTACCCCTAGCACTCCTAATCAGGACAGAGAAGTCGCCTAACCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000101080.2 ENSMUST00000121337.8 ENSMUST00000167049.8 |
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| CDS-3UTR CCA 90 bp | TGCAGGGGTGAGGGCTCCACCTGTATCAGATCTGGGTGGGGCCAGGAGACTATGGATGTGATATTTTCTTaGACTTCACGGACTGCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: CRGEGSTCIRSGWGQETMDVIFS*TSRTAV Trigger: CACTGCAGTCCGTGAAGTCCAAGAAAATATCACATC...CATAGTCTCCTGGCCCCACCCAGATCTGATACAGGTGGAGCCCTCACCCCTGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000101080.2 ENSMUST00000121337.8 ENSMUST00000167049.8 |
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| CDS-3UTR CCA 90 bp | GGCCAGGAGACTATGCAGGGACTGAGAATAGCTCTGCCCAGAGGAAGGCAAGAGGCTCATTTATCAACCTaGGCTTCAGAGAGTCCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: GQETMQGLRIALPRGRQEAHLST*ASESPS Trigger: GGAAGGACTCTCTGAAGCCCAGGTTGATAAATGAGC...CTCTTGCCTTCCTCTGGGCAGAGCTATTCTCAGTCCCTGCATAGTCTCCTGGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000101080.2 ENSMUST00000121337.8 ENSMUST00000167049.8 |
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| CDS-3UTR GCA 90 bp | CCAGGAGACTATGCAGGGACTGAGAATAGCTCTGCCCAGAGGAAGGCAAGAGTATTTCCTTCAGGGTGTTaGTCTTTGCTCCCAGGGACA | + |
|
Preference number: 4 (lower is better) Translates to: PGDYAGTENSSAQRKARVFPSGC*SLLPGT Trigger: TGTCCCTGGGAGCAAAGAGCAACACCCTGAAGGAAA...TACTCTTGCCTTCCTCTGGGCAGAGCTATTCTCAGTCCCTGCATAGTCTCCTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000101080.2 ENSMUST00000121337.8 ENSMUST00000167049.8 |
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| CDS-3UTR GCA 90 bp | GTGGGGCCAGGAGACTATGCAGGGACTGAGAATAGCTCTGCCCAGAGGAAGGCAAACTCTGCCAGGATCTaGAGGTGCTTTTCAATAAAC | + |
|
Preference number: 4 (lower is better) Translates to: VGPGDYAGTENSSAQRKANSARI*RCFSIN Trigger: GTTTATTGAAAAGCACCTGCAGATCCTGGCAGAGTT...TGCCTTCCTCTGGGCAGAGCTATTCTCAGTCCCTGCATAGTCTCCTGGCCCCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000101080.2 ENSMUST00000121337.8 ENSMUST00000167049.8 |
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| CDS-3UTR GCA 90 bp | TGTGATGAAGGTGGAGGTGTCCATCTGTCTTGTGTGGTTGGTCAACTAGACACTTCAGCTCCACCACAGTaGAGGACAGCTCCTCATCCC | + |
|
Preference number: 4 (lower is better) Translates to: CDEGGGVHLSCVVGQLDTSAPPQ*RTAPHP Trigger: GGGATGAGGAGCTGTCCTGCACTGTGGTGGAGCTGA...AGTGTCTAGTTGACCAACCACACAAGACAGATGGACACCTCCACCTTCATCACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000101080.2 ENSMUST00000121337.8 ENSMUST00000167049.8 |
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| CDS-3UTR GCA 90 bp | GGGTTAGGCGACTTCTCTGTCCTGATTAGGAGTGCTAGGGGTAGAAGAACTACCCTTGGTTCCTGTGATTaGAGACAGGTCAGCCTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: GLGDFSVLIRSARGRRTTLGSCD*RQVSLG Trigger: ACCCAGGCTGACCTGTCTGCAATCACAGGAACCAAG...GGTAGTTCTTCTACCCCTAGCACTCCTAATCAGGACAGAGAAGTCGCCTAACCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000101080.2 ENSMUST00000121337.8 ENSMUST00000167049.8 |
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| CDS-3UTR GCA 90 bp | GTGGGGCCAGGAGACTATGCAGGGACTGAGAATAGCTCTGCCCAGAGGAAGGCAATGGAAGGCAACATGTaGAGACAGACCTATATTCAG | + |
|
Preference number: 4 (lower is better) Translates to: VGPGDYAGTENSSAQRKAMEGNM*RQTYIQ Trigger: CTGAATATAGGTCTGTCTGCACATGTTGCCTTCCAT...TGCCTTCCTCTGGGCAGAGCTATTCTCAGTCCCTGCATAGTCTCCTGGCCCCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000101080.2 ENSMUST00000121337.8 ENSMUST00000167049.8 |
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| CDS-3UTR CCA 90 bp | GGCTCCACCTGTATCAGATCTGGGTGGGGCCAGGAGACTATGCAGGGACTGAGAGATGTGATATTTTCTTaGACTTCACGGACTGCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: GSTCIRSGWGQETMQGLRDVIFS*TSRTAV Trigger: CACTGCAGTCCGTGAAGTCCAAGAAAATATCACATC...TCTCAGTCCCTGCATAGTCTCCTGGCCCCACCCAGATCTGATACAGGTGGAGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000101080.2 ENSMUST00000121337.8 ENSMUST00000167049.8 |
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| CDS-3UTR CCA 90 bp | GGCCAGGAGACTATGCAGGGACTGAGAATAGCTCTGCCCAGAGGAAGGCAAGAGCAAAGTCAGTGTTGCTaGAGGCCAGTGTTAAACTGT | + |
|
Preference number: 4 (lower is better) Translates to: GQETMQGLRIALPRGRQEQSQCC*RPVLNC Trigger: ACAGTTTAACACTGGCCTCCAGCAACACTGACTTTG...CTCTTGCCTTCCTCTGGGCAGAGCTATTCTCAGTCCCTGCATAGTCTCCTGGCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000101080.2 ENSMUST00000121337.8 ENSMUST00000167049.8 |
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| CDS-3UTR CCA 90 bp | TGTGATGAAGGTGGAGGTGTCCATCTGTCTTGTGTGGTTGGTCAACTAGACACTGCCCTGGTGGATGTCTaGTTCAGGGGTCTCTGTGAG | + |
|
Preference number: 4 (lower is better) Translates to: CDEGGGVHLSCVVGQLDTALVDV*FRGLCE Trigger: CTCACAGAGACCCCTGAACCAGACATCCACCAGGGC...AGTGTCTAGTTGACCAACCACACAAGACAGATGGACACCTCCACCTTCATCACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000101080.2 ENSMUST00000121337.8 ENSMUST00000167049.8 |
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| CDS-3UTR TCA 90 bp | TTGAAGCAGATACAGTGGAGACAGCAGGGACGGGGAATAACAAAAATTTCAGGTGGGCACTGCCTGTGCTaGTCTGTACCTGGTTCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: LKQIQWRQQGRGITKISGGHCLC*SVPGSL Trigger: CAGGGAACCAGGTACAGATCAGCACAGGCAGTGCCC...ACCTGAAATTTTTGTTATTCCCCGTCCCTGCTGTCTCCACTGTATCTGCTTCAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000101080.2 ENSMUST00000121337.8 ENSMUST00000167049.8 |
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| CDS-3UTR TCA 90 bp | GTGGGGCCAGGAGACTATGCAGGGACTGAGAATAGCTCTGCCCAGAGGAAGGCACCTTTTATCCAGGTCTaGAATGAGTTCCTTGATCTT | + |
|
Preference number: 4 (lower is better) Translates to: VGPGDYAGTENSSAQRKAPFIQV*NEFLDL Trigger: AAGATCAAGGAACTCATTTCAGACCTGGATAAAAGG...TGCCTTCCTCTGGGCAGAGCTATTCTCAGTCCCTGCATAGTCTCCTGGCCCCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000101080.2 ENSMUST00000121337.8 ENSMUST00000167049.8 |
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| CDS-3UTR TCA 90 bp | GGCTCCACCTGTATCAGATCTGGGTGGGGCCAGGAGACTATGCAGGGACTGAGACCTTTTATCCAGGTCTaGAATGAGTTCCTTGATCTT | + |
|
Preference number: 4 (lower is better) Translates to: GSTCIRSGWGQETMQGLRPFIQV*NEFLDL Trigger: AAGATCAAGGAACTCATTTCAGACCTGGATAAAAGG...TCTCAGTCCCTGCATAGTCTCCTGGCCCCACCCAGATCTGATACAGGTGGAGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000101080.2 ENSMUST00000121337.8 ENSMUST00000167049.8 |
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| CDS-3UTR TCA 90 bp | GGTGAGGGCTCCACCTGTATCAGATCTGGGTGGGGCCAGGAGACTATGCAGGGAATAAAGAGGGCAATATaGGTGTTTGTGTCAGAGATA | + |
|
Preference number: 4 (lower is better) Translates to: GEGSTCIRSGWGQETMQGIKRAI*VFVSEI Trigger: TATCTCTGACACAAACACTCATATTGCCCTCTTTAT...TCCCTGCATAGTCTCCTGGCCCCACCCAGATCTGATACAGGTGGAGCCCTCACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000101080.2 ENSMUST00000121337.8 ENSMUST00000167049.8 |
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| CDS-3UTR GCA 90 bp | CCAGGAGACTATGCAGGGACTGAGAATAGCTCTGCCCAGAGGAAGGCAAGAGTAAGGCAAAGTCAGTGTTaGTGGAGGCCAGTGTTAAAC | + |
|
Preference number: 4 (lower is better) Translates to: PGDYAGTENSSAQRKARVRQSQC*WRPVLN Trigger: GTTTAACACTGGCCTCCAGCAACACTGACTTTGCCT...TACTCTTGCCTTCCTCTGGGCAGAGCTATTCTCAGTCCCTGCATAGTCTCCTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000101080.2 ENSMUST00000121337.8 ENSMUST00000167049.8 |
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| CDS-3UTR GCA 90 bp | GGGTTAGGCGACTTCTCTGTCCTGATTAGGAGTGCTAGGGGTAGAAGAACTACCTTTCCTTCAGGGTGTTaGTCTTTGCTCCCAGGGACA | + |
|
Preference number: 4 (lower is better) Translates to: GLGDFSVLIRSARGRRTTFPSGC*SLLPGT Trigger: TGTCCCTGGGAGCAAAGAGCAACACCCTGAAGGAAA...GGTAGTTCTTCTACCCCTAGCACTCCTAATCAGGACAGAGAAGTCGCCTAACCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000101080.2 ENSMUST00000121337.8 ENSMUST00000167049.8 |
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| CDS-3UTR GCA 90 bp | CAGTGGAGACAGCAGGGACGGGGAATAACAAAAATTTCAGGTCAGGAACTTGATTCCTGTGCCAGCAGCTaGTTCTGTGCCTGTCTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: QWRQQGRGITKISGQELDSCASS*FCACLS Trigger: GCTGAGACAGGCACAGAAGCAGCTGCTGGCACAGGA...ATCAAGTTCCTGACCTGAAATTTTTGTTATTCCCCGTCCCTGCTGTCTCCACTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000101080.2 ENSMUST00000121337.8 ENSMUST00000167049.8 |
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| CDS-3UTR CCA 90 bp | CAGTGGAGACAGCAGGGACGGGGAATAACAAAAATTTCAGGTCAGGAACTTGATTCCCAGGGTGACATCTaGGCAGCCAAAGACAGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: QWRQQGRGITKISGQELDSQGDI*AAKDSR Trigger: CCTGCTGTCTTTGGCTGCCCAGATGTCACCCTGGGA...ATCAAGTTCCTGACCTGAAATTTTTGTTATTCCCCGTCCCTGCTGTCTCCACTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000101080.2 ENSMUST00000121337.8 ENSMUST00000167049.8 |
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| CDS-3UTR TCA 90 bp | TGTGATGAAGGTGGAGGTGTCCATCTGTCTTGTGTGGTTGGTCAACTAGACACTCCCTTGCTTTCTCCTTaGACTCTGCCAGGATCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: CDEGGGVHLSCVVGQLDTPLLSP*TLPGSA Trigger: TGCAGATCCTGGCAGAGTTCAAGGAGAAAGCAAGGG...AGTGTCTAGTTGACCAACCACACAAGACAGATGGACACCTCCACCTTCATCACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000101080.2 ENSMUST00000121337.8 ENSMUST00000167049.8 |
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| CDS-3UTR TCA 90 bp | GTGGGGCCAGGAGACTATGCAGGGACTGAGAATAGCTCTGCCCAGAGGAAGGCAATAAAGAGGGCAATATaGGTGTTTGTGTCAGAGATA | + |
|
Preference number: 4 (lower is better) Translates to: VGPGDYAGTENSSAQRKAIKRAI*VFVSEI Trigger: TATCTCTGACACAAACACTCATATTGCCCTCTTTAT...TGCCTTCCTCTGGGCAGAGCTATTCTCAGTCCCTGCATAGTCTCCTGGCCCCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000101080.2 ENSMUST00000121337.8 ENSMUST00000167049.8 |
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| CDS-3UTR TCA 90 bp | GTGGGGCCAGGAGACTATGCAGGGACTGAGAATAGCTCTGCCCAGAGGAAGGCAATCACTCTCTGGATTTaGAACTTTTGCCATAAAGAG | + |
|
Preference number: 4 (lower is better) Translates to: VGPGDYAGTENSSAQRKAITLWI*NFCHKE Trigger: CTCTTTATGGCAAAAGTTTCAAATCCAGAGAGTGAT...TGCCTTCCTCTGGGCAGAGCTATTCTCAGTCCCTGCATAGTCTCCTGGCCCCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000101080.2 ENSMUST00000121337.8 ENSMUST00000167049.8 |
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| CDS-3UTR GCA 90 bp | ATAACCAGTCATAGGCTTGTTTCTCTGCATGAGGACGTGACAGAATTGGTCAGTTCAGCTCCACCACAGTaGAGGACAGCTCCTCATCCC | + |
|
Preference number: 4 (lower is better) Translates to: ITSHRLVSLHEDVTELVSSAPPQ*RTAPHP Trigger: GGGATGAGGAGCTGTCCTGCACTGTGGTGGAGCTGA...ACTGACCAATTCTGTCACGTCCTCATGCAGAGAAACAAGCCTATGACTGGTTAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000101080.2 ENSMUST00000121337.8 ENSMUST00000167049.8 |
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| CDS-3UTR GCA 90 bp | GAGTTGAAGCAGATACAGTGGAGACAGCAGGGACGGGGAATAACAAAAATTTCATCAGCTCCACCACAGTaGAGGACAGCTCCTCATCCC | + |
|
Preference number: 4 (lower is better) Translates to: ELKQIQWRQQGRGITKISSAPPQ*RTAPHP Trigger: GGGATGAGGAGCTGTCCTGCACTGTGGTGGAGCTGA...TGAAATTTTTGTTATTCCCCGTCCCTGCTGTCTCCACTGTATCTGCTTCAACTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000101080.2 ENSMUST00000121337.8 ENSMUST00000167049.8 |
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| CDS-3UTR GCA 90 bp | ATAACCAGTCATAGGCTTGTTTCTCTGCATGAGGACGTGACAGAATTGGTCAGTAAGCTGGCTTCCACCTaGTGCATCTTGCCCTGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: ITSHRLVSLHEDVTELVSKLAST*CILPWS Trigger: GGACCAGGGCAAGATGCAGCAGGTGGAAGCCAGCTT...ACTGACCAATTCTGTCACGTCCTCATGCAGAGAAACAAGCCTATGACTGGTTAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000101080.2 ENSMUST00000121337.8 ENSMUST00000167049.8 |
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| CDS-3UTR CCA 90 bp | GAGTTGAAGCAGATACAGTGGAGACAGCAGGGACGGGGAATAACAAAAATTTCATCCCAGGGTGACATCTaGGCAGCCAAAGACAGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: ELKQIQWRQQGRGITKISSQGDI*AAKDSR Trigger: CCTGCTGTCTTTGGCTGCCCAGATGTCACCCTGGGA...TGAAATTTTTGTTATTCCCCGTCCCTGCTGTCTCCACTGTATCTGCTTCAACTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000101080.2 ENSMUST00000121337.8 ENSMUST00000167049.8 |
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| CDS-3UTR CCA 90 bp | CCAGGAGACTATGCAGGGACTGAGAATAGCTCTGCCCAGAGGAAGGCAAGAGTACAAAGTCAGTGTTGCTaGAGGCCAGTGTTAAACTGT | + |
|
Preference number: 4 (lower is better) Translates to: PGDYAGTENSSAQRKARVQSQCC*RPVLNC Trigger: ACAGTTTAACACTGGCCTCCAGCAACACTGACTTTG...TACTCTTGCCTTCCTCTGGGCAGAGCTATTCTCAGTCCCTGCATAGTCTCCTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000101080.2 ENSMUST00000121337.8 ENSMUST00000167049.8 |
||
| CDS-3UTR CCA 90 bp | CAGTGGAGACAGCAGGGACGGGGAATAACAAAAATTTCAGGTCAGGAACTTGATGTGAAGGCCTCAGCCTaGTACAGAGCCCTTGCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: QWRQQGRGITKISGQELDVKASA*YRALAF Trigger: GAAAGCAAGGGCTCTGTACCAGGCTGAGGCCTTCAC...ATCAAGTTCCTGACCTGAAATTTTTGTTATTCCCCGTCCCTGCTGTCTCCACTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000101080.2 ENSMUST00000121337.8 ENSMUST00000167049.8 |
||
| CDS-3UTR TCA 90 bp | GAGTTGAAGCAGATACAGTGGAGACAGCAGGGACGGGGAATAACAAAAATTTCATGTTCCTTCCCAGGGTaGCATCTGGGCAGCCAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: ELKQIQWRQQGRGITKISCSFPG*HLGSQR Trigger: TCTTTGGCTGCCCAGATGTCACCCTGGGAAGGAACA...TGAAATTTTTGTTATTCCCCGTCCCTGCTGTCTCCACTGTATCTGCTTCAACTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000101080.2 ENSMUST00000121337.8 ENSMUST00000167049.8 |
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| CDS-3UTR TCA 90 bp | TGTGATGAAGGTGGAGGTGTCCATCTGTCTTGTGTGGTTGGTCAACTAGACACTAGGCAGTGCAGATGCTaGATGGGGAGAAGACAACAT | + |
|
Preference number: 4 (lower is better) Translates to: CDEGGGVHLSCVVGQLDTRQCRC*MGRRQH Trigger: ATGTTGTCTTCTCCCCATTCAGCATCTGCACTGCCT...AGTGTCTAGTTGACCAACCACACAAGACAGATGGACACCTCCACCTTCATCACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000101080.2 ENSMUST00000121337.8 ENSMUST00000167049.8 |
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| CDS-3UTR TCA 90 bp | ATAACCAGTCATAGGCTTGTTTCTCTGCATGAGGACGTGACAGAATTGGTCAGTGCTGGAAATCTGCTGTaGAGGCCTCAGCCTGGTACA | + |
|
Preference number: 4 (lower is better) Translates to: ITSHRLVSLHEDVTELVSAGNLL*RPQPGT Trigger: TGTACCAGGCTGAGGCCTTCACAGCAGATTTCCAGC...ACTGACCAATTCTGTCACGTCCTCATGCAGAGAAACAAGCCTATGACTGGTTAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000101080.2 ENSMUST00000121337.8 ENSMUST00000167049.8 |
||
| CDS-3UTR TCA 90 bp | GAGTTGAAGCAGATACAGTGGAGACAGCAGGGACGGGGAATAACAAAAATTTCAGCTGGAAATCTGCTGTaGAGGCCTCAGCCTGGTACA | + |
|
Preference number: 4 (lower is better) Translates to: ELKQIQWRQQGRGITKISAGNLL*RPQPGT Trigger: TGTACCAGGCTGAGGCCTTCACAGCAGATTTCCAGC...TGAAATTTTTGTTATTCCCCGTCCCTGCTGTCTCCACTGTATCTGCTTCAACTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000101080.2 ENSMUST00000121337.8 ENSMUST00000167049.8 |
||
| CDS-3UTR GCA 90 bp | CCAGGAGACTATGCAGGGACTGAGAATAGCTCTGCCCAGAGGAAGGCAAGAGTAAACTCTGCCAGGATCTaGAGGTGCTTTTCAATAAAC | + |
|
Preference number: 4 (lower is better) Translates to: PGDYAGTENSSAQRKARVNSARI*RCFSIN Trigger: GTTTATTGAAAAGCACCTGCAGATCCTGGCAGAGTT...TACTCTTGCCTTCCTCTGGGCAGAGCTATTCTCAGTCCCTGCATAGTCTCCTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000101080.2 ENSMUST00000121337.8 ENSMUST00000167049.8 |
||
| CDS-3UTR GCA 90 bp | GAGTTGAAGCAGATACAGTGGAGACAGCAGGGACGGGGAATAACAAAAATTTCAAGGCTGCTGGAAATCTaGTGTGAAGGCCTCAGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: ELKQIQWRQQGRGITKISRLLEI*CEGLSL Trigger: CAGGCTGAGGCCTTCACAGCAGATTTCCAGCAGCCT...TGAAATTTTTGTTATTCCCCGTCCCTGCTGTCTCCACTGTATCTGCTTCAACTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000101080.2 ENSMUST00000121337.8 ENSMUST00000167049.8 |
||
| CDS-3UTR GCA 90 bp | TTGAAGCAGATACAGTGGAGACAGCAGGGACGGGGAATAACAAAAATTTCAGGTCAGCAGCTGCTTCTGTaGCTGTCTCAGCCACATCCA | + |
|
Preference number: 4 (lower is better) Translates to: LKQIQWRQQGRGITKISGQQLLL*LSQPHP Trigger: TGGATGTGGCTGAGACAGGCACAGAAGCAGCTGCTG...ACCTGAAATTTTTGTTATTCCCCGTCCCTGCTGTCTCCACTGTATCTGCTTCAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000101080.2 ENSMUST00000121337.8 ENSMUST00000167049.8 |
||
| CDS-3UTR CCA 90 bp | CAGTGGAGACAGCAGGGACGGGGAATAACAAAAATTTCAGGTCAGGAACTTGATTACCTAAAGCCCTGGTaGATGTCTGGTTCAGGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: QWRQQGRGITKISGQELDYLKPW*MSGSGV Trigger: GACCCCTGAACCAGACATCCACCAGGGCTTTAGGTA...ATCAAGTTCCTGACCTGAAATTTTTGTTATTCCCCGTCCCTGCTGTCTCCACTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000101080.2 ENSMUST00000121337.8 ENSMUST00000167049.8 |
||
| CDS-3UTR CCA 90 bp | CAGTGGAGACAGCAGGGACGGGGAATAACAAAAATTTCAGGTCAGGAACTTGATTGTAGTCGGTGGAGATaGAGAACTTGGGCAGGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: QWRQQGRGITKISGQELDCSRWR*RTWAGR Trigger: TCTGCCTGCCCAAGTTCTCCATCTCCACCGACTACA...ATCAAGTTCCTGACCTGAAATTTTTGTTATTCCCCGTCCCTGCTGTCTCCACTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000101080.2 ENSMUST00000121337.8 ENSMUST00000167049.8 |
||
| CDS-3UTR TCA 90 bp | GATACAGTGGAGACAGCAGGGACGGGGAATAACAAAAATTTCAGGTCAGGAACTAGGCAGTGCAGATGCTaGATGGGGAGAAGACAACAT | + |
|
Preference number: 4 (lower is better) Translates to: DTVETAGTGNNKNFRSGTRQCRC*MGRRQH Trigger: ATGTTGTCTTCTCCCCATTCAGCATCTGCACTGCCT...AGTTCCTGACCTGAAATTTTTGTTATTCCCCGTCCCTGCTGTCTCCACTGTATC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000101080.2 ENSMUST00000121337.8 ENSMUST00000167049.8 |
||
| CDS-3UTR TCA 90 bp | GAGTTGAAGCAGATACAGTGGAGACAGCAGGGACGGGGAATAACAAAAATTTCACCCTTGCTTTCTCCTTaGACTCTGCCAGGATCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: ELKQIQWRQQGRGITKISPLLSP*TLPGSA Trigger: TGCAGATCCTGGCAGAGTTCAAGGAGAAAGCAAGGG...TGAAATTTTTGTTATTCCCCGTCCCTGCTGTCTCCACTGTATCTGCTTCAACTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000101080.2 ENSMUST00000121337.8 ENSMUST00000167049.8 |
||
| CDS-3UTR TCA 90 bp | GAGTTGAAGCAGATACAGTGGAGACAGCAGGGACGGGGAATAACAAAAATTTCAGCCTTGTGGACCACCTaGGAAGTTCTCAGATCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: ELKQIQWRQQGRGITKISALWTT*EVLRSL Trigger: CAAGGATCTGAGAACTTCTCAGGTGGTCCACAAGGC...TGAAATTTTTGTTATTCCCCGTCCCTGCTGTCTCCACTGTATCTGCTTCAACTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000101080.2 ENSMUST00000121337.8 ENSMUST00000167049.8 |
||
| CDS-3UTR GCA 90 bp | TGTGATGAAGGTGGAGGTGTCCATCTGTCTTGTGTGGTTGGTCAACTAGACACTGCCAGGATCTGCAGGTaGTTTTCAATAAACAGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: CDEGGGVHLSCVVGQLDTARICR*FSINRA Trigger: TGCCCTGTTTATTGAAAAGCACCTGCAGATCCTGGC...AGTGTCTAGTTGACCAACCACACAAGACAGATGGACACCTCCACCTTCATCACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000101080.2 ENSMUST00000121337.8 ENSMUST00000167049.8 |
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| CDS-3UTR GCA 90 bp | GATACAGTGGAGACAGCAGGGACGGGGAATAACAAAAATTTCAGGTCAGGAACTCTGGTACAGAGCCCTTaGTTTCTCCTTGAACTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: DTVETAGTGNNKNFRSGTLVQSP*FLLELC Trigger: GCAGAGTTCAAGGAGAAAGCAAGGGCTCTGTACCAG...AGTTCCTGACCTGAAATTTTTGTTATTCCCCGTCCCTGCTGTCTCCACTGTATC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000101080.2 ENSMUST00000121337.8 ENSMUST00000167049.8 |
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| CDS-3UTR GCA 90 bp | AACCTTATGGGTTGGCCTGTAAACTTGTATAGTCCCATCATTACTGAAAAGCTGCTCAGGGTCTCTGGTTaGAAGCTGGCTTCCACCTGC | + |
|
Preference number: 4 (lower is better) Translates to: NLMGWPVNLYSPIITEKLLRVSG*KLASTC Trigger: GCAGGTGGAAGCCAGCTTGCAACCAGAGACCCTGAG...CAGCTTTTCAGTAATGATGGGACTATACAAGTTTACAGGCCAACCCATAAGGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000101080.2 ENSMUST00000121337.8 ENSMUST00000167049.8 |
||
| CDS-3UTR CCA 90 bp | TGTGATGAAGGTGGAGGTGTCCATCTGTCTTGTGTGGTTGGTCAACTAGACACTGCTCATTTATCAACCTaGGCTTCAGAGAGTCCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: CDEGGGVHLSCVVGQLDTAHLST*ASESPS Trigger: GGAAGGACTCTCTGAAGCCCAGGTTGATAAATGAGC...AGTGTCTAGTTGACCAACCACACAAGACAGATGGACACCTCCACCTTCATCACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000101080.2 ENSMUST00000121337.8 ENSMUST00000167049.8 |
||
| CDS-3UTR CCA 90 bp | GAGTTGAAGCAGATACAGTGGAGACAGCAGGGACGGGGAATAACAAAAATTTCATGTAGTCGGTGGAGATaGAGAACTTGGGCAGGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: ELKQIQWRQQGRGITKISCSRWR*RTWAGR Trigger: TCTGCCTGCCCAAGTTCTCCATCTCCACCGACTACA...TGAAATTTTTGTTATTCCCCGTCCCTGCTGTCTCCACTGTATCTGCTTCAACTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000101080.2 ENSMUST00000121337.8 ENSMUST00000167049.8 |
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| CDS-3UTR CCA 90 bp | CCAGGAGACTATGCAGGGACTGAGAATAGCTCTGCCCAGAGGAAGGCAAGAGTAATAATTTCCAGCACTTaGGGAAAAGCATACTCCACA | + |
|
Preference number: 4 (lower is better) Translates to: PGDYAGTENSSAQRKARVIISST*GKAYST Trigger: TGTGGAGTATGCTTTTCCCCAAGTGCTGGAAATTAT...TACTCTTGCCTTCCTCTGGGCAGAGCTATTCTCAGTCCCTGCATAGTCTCCTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000101080.2 ENSMUST00000121337.8 ENSMUST00000167049.8 |
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| CDS-3UTR TCA 90 bp | GGGTTAGGCGACTTCTCTGTCCTGATTAGGAGTGCTAGGGGTAGAAGAACTACCCCTTTTATCCAGGTCTaGAATGAGTTCCTTGATCTT | + |
|
Preference number: 4 (lower is better) Translates to: GLGDFSVLIRSARGRRTTPFIQV*NEFLDL Trigger: AAGATCAAGGAACTCATTTCAGACCTGGATAAAAGG...GGTAGTTCTTCTACCCCTAGCACTCCTAATCAGGACAGAGAAGTCGCCTAACCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000101080.2 ENSMUST00000121337.8 ENSMUST00000167049.8 |
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| CDS-3UTR GCA 90 bp | GATACAGTGGAGACAGCAGGGACGGGGAATAACAAAAATTTCAGGTCAGGAACTGCCAGGATCTGCAGGTaGTTTTCAATAAACAGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: DTVETAGTGNNKNFRSGTARICR*FSINRA Trigger: TGCCCTGTTTATTGAAAAGCACCTGCAGATCCTGGC...AGTTCCTGACCTGAAATTTTTGTTATTCCCCGTCCCTGCTGTCTCCACTGTATC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000101080.2 ENSMUST00000121337.8 ENSMUST00000167049.8 |
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| CDS-3UTR GCA 90 bp | TTTGAGTTGAAGCAGATACAGTGGAGACAGCAGGGACGGGGAATAACAAAAATTCTTGGTTCCTGTGATTaGAGACAGGTCAGCCTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: FELKQIQWRQQGRGITKILGSCD*RQVSLG Trigger: ACCCAGGCTGACCTGTCTGCAATCACAGGAACCAAG...AATTTTTGTTATTCCCCGTCCCTGCTGTCTCCACTGTATCTGCTTCAACTCAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000101080.2 ENSMUST00000121337.8 ENSMUST00000167049.8 |
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| CDS-3UTR CCA 90 bp | TTTGAGTTGAAGCAGATACAGTGGAGACAGCAGGGACGGGGAATAACAAAAATTTACCTAAAGCCCTGGTaGATGTCTGGTTCAGGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: FELKQIQWRQQGRGITKIYLKPW*MSGSGV Trigger: GACCCCTGAACCAGACATCCACCAGGGCTTTAGGTA...AATTTTTGTTATTCCCCGTCCCTGCTGTCTCCACTGTATCTGCTTCAACTCAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000101080.2 ENSMUST00000121337.8 ENSMUST00000167049.8 |
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| CDS-3UTR CCA 90 bp | GATACAGTGGAGACAGCAGGGACGGGGAATAACAAAAATTTCAGGTCAGGAACTTGGAGATGGAGAACTTaGGCAGGCAGAGCTCATTTA | + |
|
Preference number: 4 (lower is better) Translates to: DTVETAGTGNNKNFRSGTWRWRT*AGRAHL Trigger: TAAATGAGCTCTGCCTGCCCAAGTTCTCCATCTCCA...AGTTCCTGACCTGAAATTTTTGTTATTCCCCGTCCCTGCTGTCTCCACTGTATC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000101080.2 ENSMUST00000121337.8 ENSMUST00000167049.8 |
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| CDS-3UTR CCA 90 bp | CAGTGGAGACAGCAGGGACGGGGAATAACAAAAATTTCAGGTCAGGAACTTGATTGGAGATGGAGAACTTaGGCAGGCAGAGCTCATTTA | + |
|
Preference number: 4 (lower is better) Translates to: QWRQQGRGITKISGQELDWRWRT*AGRAHL Trigger: TAAATGAGCTCTGCCTGCCCAAGTTCTCCATCTCCA...ATCAAGTTCCTGACCTGAAATTTTTGTTATTCCCCGTCCCTGCTGTCTCCACTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000101080.2 ENSMUST00000121337.8 ENSMUST00000167049.8 |
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| CDS-3UTR CCA 90 bp | TTTGAGTTGAAGCAGATACAGTGGAGACAGCAGGGACGGGGAATAACAAAAATTTGTAGTCGGTGGAGATaGAGAACTTGGGCAGGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: FELKQIQWRQQGRGITKICSRWR*RTWAGR Trigger: TCTGCCTGCCCAAGTTCTCCATCTCCACCGACTACA...AATTTTTGTTATTCCCCGTCCCTGCTGTCTCCACTGTATCTGCTTCAACTCAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000101080.2 ENSMUST00000121337.8 ENSMUST00000167049.8 |
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| CDS-3UTR CCA 90 bp | GGGTTAGGCGACTTCTCTGTCCTGATTAGGAGTGCTAGGGGTAGAAGAACTACCATAATTTCCAGCACTTaGGGAAAAGCATACTCCACA | + |
|
Preference number: 4 (lower is better) Translates to: GLGDFSVLIRSARGRRTTIISST*GKAYST Trigger: TGTGGAGTATGCTTTTCCCCAAGTGCTGGAAATTAT...GGTAGTTCTTCTACCCCTAGCACTCCTAATCAGGACAGAGAAGTCGCCTAACCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000101080.2 ENSMUST00000121337.8 ENSMUST00000167049.8 |
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| 3UTR CAA 72 bp | CACCAAACATTTCAGATGCTGCAGATAGGACCACAGTaGCAGGTTCCCTTCTTAAACCTTATGGGTTGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: HQTFQMLQIGPQ*QVPFLNLMGWP Trigger: AGGCCAACCCATAAGGTTTAAGAAGGGAACCTGCAACTGTGGTCCTATCTGCAGCATCTGAAATGTTTGGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000101080.2 ENSMUST00000121337.8 ENSMUST00000167049.8 |
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| CDS-3UTR TCA 90 bp | AACCTTATGGGTTGGCCTGTAAACTTGTATAGTCCCATCATTACTGAAAAGCTGCCCTTGCTTTCTCCTTaGACTCTGCCAGGATCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: NLMGWPVNLYSPIITEKLPLLSP*TLPGSA Trigger: TGCAGATCCTGGCAGAGTTCAAGGAGAAAGCAAGGG...CAGCTTTTCAGTAATGATGGGACTATACAAGTTTACAGGCCAACCCATAAGGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000101080.2 ENSMUST00000121337.8 ENSMUST00000167049.8 |
||
| CDS-3UTR TCA 90 bp | GGGTTAGGCGACTTCTCTGTCCTGATTAGGAGTGCTAGGGGTAGAAGAACTACCATAAAGAGGGCAATATaGGTGTTTGTGTCAGAGATA | + |
|
Preference number: 4 (lower is better) Translates to: GLGDFSVLIRSARGRRTTIKRAI*VFVSEI Trigger: TATCTCTGACACAAACACTCATATTGCCCTCTTTAT...GGTAGTTCTTCTACCCCTAGCACTCCTAATCAGGACAGAGAAGTCGCCTAACCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000101080.2 ENSMUST00000121337.8 ENSMUST00000167049.8 |
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| CDS-3UTR GCA 90 bp | TGTGATGAAGGTGGAGGTGTCCATCTGTCTTGTGTGGTTGGTCAACTAGACACTATGGAAGGCAACATGTaGAGACAGACCTATATTCAG | + |
|
Preference number: 4 (lower is better) Translates to: CDEGGGVHLSCVVGQLDTMEGNM*RQTYIQ Trigger: CTGAATATAGGTCTGTCTGCACATGTTGCCTTCCAT...AGTGTCTAGTTGACCAACCACACAAGACAGATGGACACCTCCACCTTCATCACA 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000101080.2 ENSMUST00000121337.8 ENSMUST00000167049.8 |
||
| CDS-3UTR CCA 90 bp | GAGTTGAAGCAGATACAGTGGAGACAGCAGGGACGGGGAATAACAAAAATTTCAGCTCATTTATCAACCTaGGCTTCAGAGAGTCCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: ELKQIQWRQQGRGITKISAHLST*ASESPS Trigger: GGAAGGACTCTCTGAAGCCCAGGTTGATAAATGAGC...TGAAATTTTTGTTATTCCCCGTCCCTGCTGTCTCCACTGTATCTGCTTCAACTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000101080.2 ENSMUST00000121337.8 ENSMUST00000167049.8 |
||
| CDS-3UTR GCA 90 bp | CAGTGGAGACAGCAGGGACGGGGAATAACAAAAATTTCAGGTCAGGAACTTGATATGGAAGGCAACATGTaGAGACAGACCTATATTCAG | + |
|
Preference number: 4 (lower is better) Translates to: QWRQQGRGITKISGQELDMEGNM*RQTYIQ Trigger: CTGAATATAGGTCTGTCTGCACATGTTGCCTTCCAT...ATCAAGTTCCTGACCTGAAATTTTTGTTATTCCCCGTCCCTGCTGTCTCCACTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000101080.2 ENSMUST00000121337.8 ENSMUST00000167049.8 |
||
| CDS-3UTR CCA 90 bp | TGTGATGAAGGTGGAGGTGTCCATCTGTCTTGTGTGGTTGGTCAACTAGACACTATAATTTCCAGCACTTaGGGAAAAGCATACTCCACA | + |
|
Preference number: 4 (lower is better) Translates to: CDEGGGVHLSCVVGQLDTIISST*GKAYST Trigger: TGTGGAGTATGCTTTTCCCCAAGTGCTGGAAATTAT...AGTGTCTAGTTGACCAACCACACAAGACAGATGGACACCTCCACCTTCATCACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000101080.2 ENSMUST00000121337.8 ENSMUST00000167049.8 |
||
| CDS-3UTR GCA 90 bp | AACCTTATGGGTTGGCCTGTAAACTTGTATAGTCCCATCATTACTGAAAAGCTGAGGCAAAGTCAGTGTTaGTGGAGGCCAGTGTTAAAC | + |
|
Preference number: 4 (lower is better) Translates to: NLMGWPVNLYSPIITEKLRQSQC*WRPVLN Trigger: GTTTAACACTGGCCTCCAGCAACACTGACTTTGCCT...CAGCTTTTCAGTAATGATGGGACTATACAAGTTTACAGGCCAACCCATAAGGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000101080.2 ENSMUST00000121337.8 ENSMUST00000167049.8 |
||
| CDS-3UTR CCA 90 bp | TGTGATGAAGGTGGAGGTGTCCATCTGTCTTGTGTGGTTGGTCAACTAGACACTGACAACATTTTCATCTaGATTCTTCAAAACCAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: CDEGGGVHLSCVVGQLDTDNIFI*ILQNQL Trigger: GAGCTGGTTTTGAAGAATCCAGATGAAAATGTTGTC...AGTGTCTAGTTGACCAACCACACAAGACAGATGGACACCTCCACCTTCATCACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000101080.2 ENSMUST00000121337.8 ENSMUST00000167049.8 |
||
| 3UTR CAA 72 bp | ACATGTTTATTGATCCTTAGCTCCTGCCCTTTCAATTaGTGTGATGAAGGTGGAGGTGTCCATCTGTCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: TCLLILSSCPFN*CDEGGGVHLSC Trigger: ACAAGACAGATGGACACCTCCACCTTCATCACACAAATTGAAAGGGCAGGAGCTAAGGATCAATAAACATGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000101080.2 ENSMUST00000121337.8 ENSMUST00000167049.8 |
||
| 3UTR CAA 72 bp | GTTCCCTTCTTAAACCTTATGGGTTGGCCTGTAAACTaGTATAGTCCCATCATTACTGAAAAGCTGAAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: VPFLNLMGWPVN*YSPIITEKLKA Trigger: TGCCTTCAGCTTTTCAGTAATGATGGGACTATACAAGTTTACAGGCCAACCCATAAGGTTTAAGAAGGGAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000101080.2 ENSMUST00000121337.8 ENSMUST00000167049.8 |
||
| CDS-3UTR CCA 90 bp | TTGAAGCAGATACAGTGGAGACAGCAGGGACGGGGAATAACAAAAATTTCAGGTGACAACATTTTCATCTaGATTCTTCAAAACCAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: LKQIQWRQQGRGITKISGDNIFI*ILQNQL Trigger: GAGCTGGTTTTGAAGAATCCAGATGAAAATGTTGTC...ACCTGAAATTTTTGTTATTCCCCGTCCCTGCTGTCTCCACTGTATCTGCTTCAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000101080.2 ENSMUST00000121337.8 ENSMUST00000167049.8 |
||
| CDS-3UTR CCA 90 bp | TTTGAGTTGAAGCAGATACAGTGGAGACAGCAGGGACGGGGAATAACAAAAATTGACAACATTTTCATCTaGATTCTTCAAAACCAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: FELKQIQWRQQGRGITKIDNIFI*ILQNQL Trigger: GAGCTGGTTTTGAAGAATCCAGATGAAAATGTTGTC...AATTTTTGTTATTCCCCGTCCCTGCTGTCTCCACTGTATCTGCTTCAACTCAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000101080.2 ENSMUST00000121337.8 ENSMUST00000167049.8 |
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| CDS-3UTR CAA 90 bp | CCATGCAGCTGCAGGGGTGAGGGCTCCACCTGTATCAGATCTGGGTGGGGCCAGGCCCTTGCTTTCTCCTaGAACTCTGCCAGGATCTGC | + |
|
Preference number: 5 (lower is better) Translates to: PCSCRGEGSTCIRSGWGQALAFS*NSARIC Trigger: GCAGATCCTGGCAGAGTTCAAGGAGAAAGCAAGGGC...CTGGCCCCACCCAGATCTGATACAGGTGGAGCCCTCACCCCTGCAGCTGCATGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000101080.2 ENSMUST00000121337.8 ENSMUST00000167049.8 |
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| CDS GCA 90 bp | AACCTGGGCTTCAGAGAGTCCTTCCAATTCCTCAGGGTCTCTGGTTaGAAGCTGGCTTCCACCTGCTGCATCTTGCCCTGGTCCGGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: NLGFRESFQFLRVSG*KLASTCCILPWSGR Trigger: CCTCCCGGACCAGGGCAAGATGCAGCAGGTGGAAGCCAGCTTGCAACCAGAGACCCTGAGGAATTGGAAGGACTCTCTGAAGCCCAGGTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000101080.2 ENSMUST00000121337.8 ENSMUST00000167049.8 |
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| CDS CCA 90 bp | GTGGCCTCGAGAGGCTGCTGGAAATCTGCTGTGAAGGCCTCAGCCTaGTACAGAGCCCTTGCTTTCTCCTTGAACTCTGCCAGGATCTGC | + |
|
Preference number: 5 (lower is better) Translates to: VASRGCWKSAVKASA*YRALAFSLNSARIC Trigger: GCAGATCCTGGCAGAGTTCAAGGAGAAAGCAAGGGCTCTGTACCAGGCTGAGGCCTTCACAGCAGATTTCCAGCAGCCTCTCGAGGCCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000101080.2 ENSMUST00000121337.8 ENSMUST00000167049.8 |
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| CDS CCA 90 bp | TGCCCAGCTCAGGAAGGATGTGCTCCAGGCTGTAGTCGGTGGAGATaGAGAACTTGGGCAGGCAGAGCTCATTTATCAACCTGGGCTTCA | + |
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Preference number: 5 (lower is better) Translates to: CPAQEGCAPGCSRWR*RTWAGRAHLSTWAS Trigger: TGAAGCCCAGGTTGATAAATGAGCTCTGCCTGCCCAAGTTCTCCATCTCCACCGACTACAGCCTGGAGCACATCCTTCCTGAGCTGGGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000101080.2 ENSMUST00000121337.8 ENSMUST00000167049.8 |
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| CDS CCA 90 bp | GAAGTTCTCAGATCCTTGGTTCCTGTGATTGCAGACAGGTCAGCCTaGGTGGAGAAGAGCTCCCTGATGCCCAGCTCAGGAAGGATGTGC | + |
|
Preference number: 5 (lower is better) Translates to: EVLRSLVPVIADRSA*VEKSSLMPSSGRMC Trigger: GCACATCCTTCCTGAGCTGGGCATCAGGGAGCTCTTCTCCACCCAGGCTGACCTGTCTGCAATCACAGGAACCAAGGATCTGAGAACTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000101080.2 ENSMUST00000121337.8 ENSMUST00000167049.8 |
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| CDS-3UTR CAA 90 bp | GGCTCCACCTGTATCAGATCTGGGTGGGGCCAGGAGACTATGCAGGGACTGAGAAAGGCAAAGTCAGTGTaGCTGGAGGCCAGTGTTAAA | + |
|
Preference number: 5 (lower is better) Translates to: GSTCIRSGWGQETMQGLRKAKSV*LEASVK Trigger: TTTAACACTGGCCTCCAGCAACACTGACTTTGCCTT...TCTCAGTCCCTGCATAGTCTCCTGGCCCCACCCAGATCTGATACAGGTGGAGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000101080.2 ENSMUST00000121337.8 ENSMUST00000167049.8 |
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| CDS TCA 90 bp | TCTGTGCCTGTCTCAGCCACATCCAGCACAGCCTTGTGGACCACCTaGGAAGTTCTCAGATCCTTGGTTCCTGTGATTGCAGACAGGTCA | + |
|
Preference number: 5 (lower is better) Translates to: SVPVSATSSTALWTT*EVLRSLVPVIADRS Trigger: TGACCTGTCTGCAATCACAGGAACCAAGGATCTGAGAACTTCTCAGGTGGTCCACAAGGCTGTGCTGGATGTGGCTGAGACAGGCACAGA 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000101080.2 ENSMUST00000121337.8 ENSMUST00000167049.8 |
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| CDS CCA 90 bp | CGGTGGAGATGGAGAACTTGGGCAGGCAGAGCTCATTTATCAACCTaGGCTTCAGAGAGTCCTTCCAATTCCTCAGGGTCTCTGGTTGCA | + |
|
Preference number: 5 (lower is better) Translates to: RWRWRTWAGRAHLST*ASESPSNSSGSLVA Trigger: TGCAACCAGAGACCCTGAGGAATTGGAAGGACTCTCTGAAGCCCAGGTTGATAAATGAGCTCTGCCTGCCCAAGTTCTCCATCTCCACCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000101080.2 ENSMUST00000121337.8 ENSMUST00000167049.8 |
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| CDS-3UTR CAA 90 bp | AGGAGTGCTAGGGGTAGAAGAACTACCCTGACCCACAGCCCCATGCAGCTGCAGACAACATTGGAGATTTaGATATCCTGTGCCAGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: RSARGRRTTLTHSPMQLQTTLEI*ISCASS Trigger: GCTGCTGGCACAGGATATCAAAATCTCCAATGTTGT...CTGCAGCTGCATGGGGCTGTGGGTCAGGGTAGTTCTTCTACCCCTAGCACTCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000101080.2 ENSMUST00000121337.8 ENSMUST00000167049.8 |
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| CDS-3UTR CAA 90 bp | GGCTCCACCTGTATCAGATCTGGGTGGGGCCAGGAGACTATGCAGGGACTGAGAACAACATTGGAGATTTaGATATCCTGTGCCAGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: GSTCIRSGWGQETMQGLRTTLEI*ISCASS Trigger: GCTGCTGGCACAGGATATCAAAATCTCCAATGTTGT...TCTCAGTCCCTGCATAGTCTCCTGGCCCCACCCAGATCTGATACAGGTGGAGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000101080.2 ENSMUST00000121337.8 ENSMUST00000167049.8 |
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| CDS-3UTR CAA 90 bp | GTGGGGCCAGGAGACTATGCAGGGACTGAGAATAGCTCTGCCCAGAGGAAGGCACATAATTTCCAGCACTaGGGGAAAAGCATACTCCAC | + |
|
Preference number: 5 (lower is better) Translates to: VGPGDYAGTENSSAQRKAHNFQH*GKSILH Trigger: GTGGAGTATGCTTTTCCCCAAGTGCTGGAAATTATG...TGCCTTCCTCTGGGCAGAGCTATTCTCAGTCCCTGCATAGTCTCCTGGCCCCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000101080.2 ENSMUST00000121337.8 ENSMUST00000167049.8 |
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| CDS GCA 90 bp | GCCTGGTACAGAGCCCTTGCTTTCTCCTTGAACTCTGCCAGGATCTaGAGGTGCTTTTCAATAAACAGGGCACTGCCTGTGCTGATCTGT | + |
|
Preference number: 5 (lower is better) Translates to: AWYRALAFSLNSARI*RCFSINRALPVLIC Trigger: ACAGATCAGCACAGGCAGTGCCCTGTTTATTGAAAAGCACCTGCAGATCCTGGCAGAGTTCAAGGAGAAAGCAAGGGCTCTGTACCAGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000101080.2 ENSMUST00000121337.8 ENSMUST00000167049.8 |
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| CDS GCA 90 bp | ATAGTCATTGATGAGCTTTGTGGCCTCGAGAGGCTGCTGGAAATCTaGTGTGAAGGCCTCAGCCTGGTACAGAGCCCTTGCTTTCTCCTT | + |
|
Preference number: 5 (lower is better) Translates to: IVIDELCGLERLLEI*CEGLSLVQSPCFLL Trigger: AAGGAGAAAGCAAGGGCTCTGTACCAGGCTGAGGCCTTCACAGCAGATTTCCAGCAGCCTCTCGAGGCCACAAAGCTCATCAATGACTAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000101080.2 ENSMUST00000121337.8 ENSMUST00000167049.8 |
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| CDS-3UTR CAA 90 bp | CAGTGGAGACAGCAGGGACGGGGAATAACAAAAATTTCAGGTCAGGAACTTGATTCAGGGTGTTGCTCTTaGCTCCCAGGGACAGCAGGG | + |
|
Preference number: 5 (lower is better) Translates to: QWRQQGRGITKISGQELDSGCCS*LPGTAG Trigger: CCCTGCTGTCCCTGGGAGCAAAGAGCAACACCCTGA...ATCAAGTTCCTGACCTGAAATTTTTGTTATTCCCCGTCCCTGCTGTCTCCACTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000101080.2 ENSMUST00000121337.8 ENSMUST00000167049.8 |
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| CDS-3UTR CAA 90 bp | TTTGAGTTGAAGCAGATACAGTGGAGACAGCAGGGACGGGGAATAACAAAAATTTCAGGGTGTTGCTCTTaGCTCCCAGGGACAGCAGGG | + |
|
Preference number: 5 (lower is better) Translates to: FELKQIQWRQQGRGITKISGCCS*LPGTAG Trigger: CCCTGCTGTCCCTGGGAGCAAAGAGCAACACCCTGA...AATTTTTGTTATTCCCCGTCCCTGCTGTCTCCACTGTATCTGCTTCAACTCAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000101080.2 ENSMUST00000121337.8 ENSMUST00000167049.8 |
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| CDS-3UTR CAA 90 bp | CAGTGGAGACAGCAGGGACGGGGAATAACAAAAATTTCAGGTCAGGAACTTGATGCCCTTGCTTTCTCCTaGAACTCTGCCAGGATCTGC | + |
|
Preference number: 5 (lower is better) Translates to: QWRQQGRGITKISGQELDALAFS*NSARIC Trigger: GCAGATCCTGGCAGAGTTCAAGGAGAAAGCAAGGGC...ATCAAGTTCCTGACCTGAAATTTTTGTTATTCCCCGTCCCTGCTGTCTCCACTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000101080.2 ENSMUST00000121337.8 ENSMUST00000167049.8 |
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| CDS-3UTR CAA 90 bp | TTGAAGCAGATACAGTGGAGACAGCAGGGACGGGGAATAACAAAAATTTCAGGTGCCCTTGCTTTCTCCTaGAACTCTGCCAGGATCTGC | + |
|
Preference number: 5 (lower is better) Translates to: LKQIQWRQQGRGITKISGALAFS*NSARIC Trigger: GCAGATCCTGGCAGAGTTCAAGGAGAAAGCAAGGGC...ACCTGAAATTTTTGTTATTCCCCGTCCCTGCTGTCTCCACTGTATCTGCTTCAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000101080.2 ENSMUST00000121337.8 ENSMUST00000167049.8 |
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| CDS-3UTR CAA 90 bp | TGTGATGAAGGTGGAGGTGTCCATCTGTCTTGTGTGGTTGGTCAACTAGACACTAAGGCAAAGTCAGTGTaGCTGGAGGCCAGTGTTAAA | + |
|
Preference number: 5 (lower is better) Translates to: CDEGGGVHLSCVVGQLDTKAKSV*LEASVK Trigger: TTTAACACTGGCCTCCAGCAACACTGACTTTGCCTT...AGTGTCTAGTTGACCAACCACACAAGACAGATGGACACCTCCACCTTCATCACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000101080.2 ENSMUST00000121337.8 ENSMUST00000167049.8 |
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| CDS-3UTR CAA 90 bp | GATACAGTGGAGACAGCAGGGACGGGGAATAACAAAAATTTCAGGTCAGGAACTAAGGCAAAGTCAGTGTaGCTGGAGGCCAGTGTTAAA | + |
|
Preference number: 5 (lower is better) Translates to: DTVETAGTGNNKNFRSGTKAKSV*LEASVK Trigger: TTTAACACTGGCCTCCAGCAACACTGACTTTGCCTT...AGTTCCTGACCTGAAATTTTTGTTATTCCCCGTCCCTGCTGTCTCCACTGTATC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000101080.2 ENSMUST00000121337.8 ENSMUST00000167049.8 |
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| CDS-3UTR CAA 90 bp | TGTGATGAAGGTGGAGGTGTCCATCTGTCTTGTGTGGTTGGTCAACTAGACACTCATAATTTCCAGCACTaGGGGAAAAGCATACTCCAC | + |
|
Preference number: 5 (lower is better) Translates to: CDEGGGVHLSCVVGQLDTHNFQH*GKSILH Trigger: GTGGAGTATGCTTTTCCCCAAGTGCTGGAAATTATG...AGTGTCTAGTTGACCAACCACACAAGACAGATGGACACCTCCACCTTCATCACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000101080.2 ENSMUST00000121337.8 ENSMUST00000167049.8 |
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| CDS TCA 90 bp | CAACATTTTCATCTGGATTCTTCAAAACCAGCTCCTTGTAGAGGCTaGAGGCAAAGTCAGTGTTGCTGGAGGCCAGTGTTAAACTGTCCA | + |
|
Preference number: 5 (lower is better) Translates to: QHFHLDSSKPAPCRG*RQSQCCWRPVLNCP Trigger: TGGACAGTTTAACACTGGCCTCCAGCAACACTGACTTTGCCTTCAGCCTCTACAAGGAGCTGGTTTTGAAGAATCCAGATGAAAATGTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000101080.2 ENSMUST00000121337.8 ENSMUST00000167049.8 |
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| CDS-3UTR CAA 90 bp | GATACAGTGGAGACAGCAGGGACGGGGAATAACAAAAATTTCAGGTCAGGAACTCATAATTTCCAGCACTaGGGGAAAAGCATACTCCAC | + |
|
Preference number: 5 (lower is better) Translates to: DTVETAGTGNNKNFRSGTHNFQH*GKSILH Trigger: GTGGAGTATGCTTTTCCCCAAGTGCTGGAAATTATG...AGTTCCTGACCTGAAATTTTTGTTATTCCCCGTCCCTGCTGTCTCCACTGTATC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000101080.2 ENSMUST00000121337.8 ENSMUST00000167049.8 |
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| CDS-3UTR CAA 90 bp | ATAACCAGTCATAGGCTTGTTTCTCTGCATGAGGACGTGACAGAATTGGTCAGTACAACATTGGAGATTTaGATATCCTGTGCCAGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: ITSHRLVSLHEDVTELVSTTLEI*ISCASS Trigger: GCTGCTGGCACAGGATATCAAAATCTCCAATGTTGT...ACTGACCAATTCTGTCACGTCCTCATGCAGAGAAACAAGCCTATGACTGGTTAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000101080.2 ENSMUST00000121337.8 ENSMUST00000167049.8 |
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| CDS CCA 90 bp | CAACATGTGCAGACAGACCTATATTCAGGCATAATTTCCAGCACTTaGGGAAAAGCATACTCCACATTTAGGAAGTTCTCATCACTCTCT | + |
|
Preference number: 5 (lower is better) Translates to: QHVQTDLYSGIISST*GKAYSTFRKFSSLS Trigger: AGAGAGTGATGAGAACTTCCTAAATGTGGAGTATGCTTTTCCCCAAGTGCTGGAAATTATGCCTGAATATAGGTCTGTCTGCACATGTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000101080.2 ENSMUST00000121337.8 ENSMUST00000167049.8 |
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| CDS TCA 90 bp | TCATCACTCTCTGGATTTGAAACTTTTGCCATAAAGAGGGCAATATaGGTGTTTGTGTCAGAGATAATCATCAGGAATGGCCTGTCGAAA | + |
|
Preference number: 5 (lower is better) Translates to: SSLSGFETFAIKRAI*VFVSEIIIRNGLSK Trigger: TTTCGACAGGCCATTCCTGATGATTATCTCTGACACAAACACTCATATTGCCCTCTTTATGGCAAAAGTTTCAAATCCAGAGAGTGATGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000101080.2 ENSMUST00000121337.8 ENSMUST00000167049.8 |
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| CDS CCA 90 bp | AAAGAGGGCAATATGAGTGTTTGTGTCAGAGATAATCATCAGGAATaGCCTGTCGAAATATATTTTCATAGAGTAGATTACACCTTGACA | + |
|
Preference number: 5 (lower is better) Translates to: KEGNMSVCVRDNHQE*PVEIYFHRVDYTLT Trigger: TGTCAAGGTGTAATCTACTCTATGAAAATATATTTCGACAGGCCATTCCTGATGATTATCTCTGACACAAACACTCATATTGCCCTCTTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000101080.2 ENSMUST00000121337.8 ENSMUST00000167049.8 |
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| CDS GCA 72 bp | GATGAGCTTTGTGGCCTCGAGAGGCTGCTGGAAATCTaGTGTGAAGGCCTCAGCCTGGTACAGAGCCCTTGC | + |
|
Preference number: 6 (lower is better) Translates to: DELCGLERLLEI*CEGLSLVQSPC Trigger: GCAAGGGCTCTGTACCAGGCTGAGGCCTTCACAGCAGATTTCCAGCAGCCTCTCGAGGCCACAAAGCTCATC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000101080.2 ENSMUST00000121337.8 ENSMUST00000167049.8 |
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| CDS CCA 72 bp | AGTCCTTCCAATTCCTCAGGGTCTCTGGTTGCAAGCTaGCTTCCACCTGCTGCATCTTGCCCTGGTCCGGGA | + |
|
Preference number: 6 (lower is better) Translates to: SPSNSSGSLVAS*LPPAASCPGPG Trigger: TCCCGGACCAGGGCAAGATGCAGCAGGTGGAAGCCAGCTTGCAACCAGAGACCCTGAGGAATTGGAAGGACT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000101080.2 ENSMUST00000121337.8 ENSMUST00000167049.8 |
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| CDS TCA 72 bp | GCTTTGTGGCCTCGAGAGGCTGCTGGAAATCTGCTGTaGAGGCCTCAGCCTGGTACAGAGCCCTTGCTTTCT | + |
|
Preference number: 6 (lower is better) Translates to: ALWPREAAGNLL*RPQPGTEPLLS Trigger: AGAAAGCAAGGGCTCTGTACCAGGCTGAGGCCTTCACAGCAGATTTCCAGCAGCCTCTCGAGGCCACAAAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000101080.2 ENSMUST00000121337.8 ENSMUST00000167049.8 |
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| CDS GCA 72 bp | ATCTGCTGTGAAGGCCTCAGCCTGGTACAGAGCCCTTaGTTTCTCCTTGAACTCTGCCAGGATCTGCAGGTG | + |
|
Preference number: 6 (lower is better) Translates to: ICCEGLSLVQSP*FLLELCQDLQV Trigger: CACCTGCAGATCCTGGCAGAGTTCAAGGAGAAAGCAAGGGCTCTGTACCAGGCTGAGGCCTTCACAGCAGAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000101080.2 ENSMUST00000121337.8 ENSMUST00000167049.8 |
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| CDS GCA 72 bp | TTCAGAGAGTCCTTCCAATTCCTCAGGGTCTCTGGTTaGAAGCTGGCTTCCACCTGCTGCATCTTGCCCTGG | + |
|
Preference number: 6 (lower is better) Translates to: FRESFQFLRVSG*KLASTCCILPW Trigger: CCAGGGCAAGATGCAGCAGGTGGAAGCCAGCTTGCAACCAGAGACCCTGAGGAATTGGAAGGACTCTCTGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000101080.2 ENSMUST00000121337.8 ENSMUST00000167049.8 |
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| CDS CCA 72 bp | AGAGGCTGCTGGAAATCTGCTGTGAAGGCCTCAGCCTaGTACAGAGCCCTTGCTTTCTCCTTGAACTCTGCC | + |
|
Preference number: 6 (lower is better) Translates to: RGCWKSAVKASA*YRALAFSLNSA Trigger: GGCAGAGTTCAAGGAGAAAGCAAGGGCTCTGTACCAGGCTGAGGCCTTCACAGCAGATTTCCAGCAGCCTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000101080.2 ENSMUST00000121337.8 ENSMUST00000167049.8 |
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| CDS GCA 72 bp | CACCTGAGAAGTTCTCAGATCCTTGGTTCCTGTGATTaGAGACAGGTCAGCCTGGGTGGAGAAGAGCTCCCT | + |
|
Preference number: 6 (lower is better) Translates to: HLRSSQILGSCD*RQVSLGGEELP Trigger: AGGGAGCTCTTCTCCACCCAGGCTGACCTGTCTGCAATCACAGGAACCAAGGATCTGAGAACTTCTCAGGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000101080.2 ENSMUST00000121337.8 ENSMUST00000167049.8 |
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| CDS CCA 72 bp | TGTGCTCCAGGCTGTAGTCGGTGGAGATGGAGAACTTaGGCAGGCAGAGCTCATTTATCAACCTGGGCTTCA | + |
|
Preference number: 6 (lower is better) Translates to: CAPGCSRWRWRT*AGRAHLSTWAS Trigger: TGAAGCCCAGGTTGATAAATGAGCTCTGCCTGCCCAAGTTCTCCATCTCCACCGACTACAGCCTGGAGCACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000101080.2 ENSMUST00000121337.8 ENSMUST00000167049.8 |
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| CDS TCA 72 bp | GTCTCAGCCACATCCAGCACAGCCTTGTGGACCACCTaGGAAGTTCTCAGATCCTTGGTTCCTGTGATTGCA | + |
|
Preference number: 6 (lower is better) Translates to: VSATSSTALWTT*EVLRSLVPVIA Trigger: TGCAATCACAGGAACCAAGGATCTGAGAACTTCTCAGGTGGTCCACAAGGCTGTGCTGGATGTGGCTGAGAC 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000101080.2 ENSMUST00000121337.8 ENSMUST00000167049.8 |
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| CDS CAA 90 bp | TCTGCTGTGAAGGCCTCAGCCTGGTACAGAGCCCTTGCTTTCTCCTaGAACTCTGCCAGGATCTGCAGGTGCTTTTCAATAAACAGGGCA | + |
|
Preference number: 6 (lower is better) Translates to: SAVKASAWYRALAFS*NSARICRCFSINRA Trigger: TGCCCTGTTTATTGAAAAGCACCTGCAGATCCTGGCAGAGTTCAAGGAGAAAGCAAGGGCTCTGTACCAGGCTGAGGCCTTCACAGCAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000101080.2 ENSMUST00000121337.8 ENSMUST00000167049.8 |
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| CDS CCA 72 bp | TGGAGAACTTGGGCAGGCAGAGCTCATTTATCAACCTaGGCTTCAGAGAGTCCTTCCAATTCCTCAGGGTCT | + |
|
Preference number: 6 (lower is better) Translates to: WRTWAGRAHLST*ASESPSNSSGS Trigger: AGACCCTGAGGAATTGGAAGGACTCTCTGAAGCCCAGGTTGATAAATGAGCTCTGCCTGCCCAAGTTCTCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000101080.2 ENSMUST00000121337.8 ENSMUST00000167049.8 |
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| CDS GCA 72 bp | CTTGCTTTCTCCTTGAACTCTGCCAGGATCTGCAGGTaGTTTTCAATAAACAGGGCACTGCCTGTGCTGATC | + |
|
Preference number: 6 (lower is better) Translates to: LAFSLNSARICR*FSINRALPVLI Trigger: GATCAGCACAGGCAGTGCCCTGTTTATTGAAAAGCACCTGCAGATCCTGGCAGAGTTCAAGGAGAAAGCAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000101080.2 ENSMUST00000121337.8 ENSMUST00000167049.8 |
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| CDS TCA 72 bp | CATCTGGATTCTTCAAAACCAGCTCCTTGTAGAGGCTaGAGGCAAAGTCAGTGTTGCTGGAGGCCAGTGTTA | + |
|
Preference number: 6 (lower is better) Translates to: HLDSSKPAPCRG*RQSQCCWRPVL Trigger: TAACACTGGCCTCCAGCAACACTGACTTTGCCTTCAGCCTCTACAAGGAGCTGGTTTTGAAGAATCCAGATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000101080.2 ENSMUST00000121337.8 ENSMUST00000167049.8 |
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| CDS CCA 72 bp | GCCAGTGTTAAACTGTCCACTGATGTGATATTTTCTTaGACTTCACGGACTGCAGTGTTCCTTCCCAGGGTG | + |
|
Preference number: 6 (lower is better) Translates to: ASVKLSTDVIFS*TSRTAVFLPRV Trigger: CACCCTGGGAAGGAACACTGCAGTCCGTGAAGTCCAAGAAAATATCACATCAGTGGACAGTTTAACACTGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000101080.2 ENSMUST00000121337.8 ENSMUST00000167049.8 |
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| CDS CAA 90 bp | ATATATTTTCATAGAGTAGATTACACCTTGACAACATTGGAGATTTaGATATCCTGTGCCAGCAGCTGCTTCTGTGCCTGTCTCAGCCAC | + |
|
Preference number: 6 (lower is better) Translates to: IYFHRVDYTLTTLEI*ISCASSCFCACLSH Trigger: GTGGCTGAGACAGGCACAGAAGCAGCTGCTGGCACAGGATATCAAAATCTCCAATGTTGTCAAGGTGTAATCTACTCTATGAAAATATAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000101080.2 ENSMUST00000121337.8 ENSMUST00000167049.8 |
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| CDS CCA 72 bp | CAGACAGACCTATATTCAGGCATAATTTCCAGCACTTaGGGAAAAGCATACTCCACATTTAGGAAGTTCTCA | + |
|
Preference number: 6 (lower is better) Translates to: QTDLYSGIISST*GKAYSTFRKFS Trigger: TGAGAACTTCCTAAATGTGGAGTATGCTTTTCCCCAAGTGCTGGAAATTATGCCTGAATATAGGTCTGTCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000101080.2 ENSMUST00000121337.8 ENSMUST00000167049.8 |
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| CDS CAA 90 bp | CAGGAATGGCCTGTCGAAATATATTTTCATAGAGTAGATTACACCTaGACAACATTGGAGATTTTGATATCCTGTGCCAGCAGCTGCTTC | + |
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Preference number: 6 (lower is better) Translates to: QEWPVEIYFHRVDYT*TTLEILISCASSCF Trigger: GAAGCAGCTGCTGGCACAGGATATCAAAATCTCCAATGTTGTCAAGGTGTAATCTACTCTATGAAAATATATTTCGACAGGCCATTCCTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000101080.2 ENSMUST00000121337.8 ENSMUST00000167049.8 |
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| CDS TCA 72 bp | TCTGGATTTGAAACTTTTGCCATAAAGAGGGCAATATaGGTGTTTGTGTCAGAGATAATCATCAGGAATGGC | + |
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Preference number: 6 (lower is better) Translates to: SGFETFAIKRAI*VFVSEIIIRNG Trigger: GCCATTCCTGATGATTATCTCTGACACAAACACTCATATTGCCCTCTTTATGGCAAAAGTTTCAAATCCAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000101080.2 ENSMUST00000121337.8 ENSMUST00000167049.8 |
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| CDS CAA 72 bp | CCTGTCGAAATATATTTTCATAGAGTAGATTACACCTaGACAACATTGGAGATTTTGATATCCTGTGCCAGC | + |
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Preference number: 6 (lower is better) Translates to: PVEIYFHRVDYT*TTLEILISCAS Trigger: GCTGGCACAGGATATCAAAATCTCCAATGTTGTCAAGGTGTAATCTACTCTATGAAAATATATTTCGACAGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000101080.2 ENSMUST00000121337.8 ENSMUST00000167049.8 |
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