Pregenerated sensors for SERPINA3C (Mus musculus)
Ensembl gene IDs: ENSMUSG00000066361Ensembl transcript IDs: ENSMUST00000085050.4
Found 84 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AGAGAGAGAGAGAGAGTAGGAGTGCCAGGGGGAGAGGAGCTGCTCTaGCCTCCAGTCCCATGCAGCTGCAGGAATTTGGACTACAACTCT | + |
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Preference number: 1 (lower is better) Translates to: RERERVGVPGGEELL*PPVPCSCRNLDYNS Trigger: AGAGTTGTAGTCCAAATTCCTGCAGCTGCATGGGACTGGAGGTCAGAGCAGCTCCTCTCCCCCTGGCACTCCTACTCTCTCTCTCTCTCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000085050.4 |
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| 3UTR GCA 90 bp | TGTCGCTGTCTAAGCCAACTTTGCAACAGCCAATCAGAGCTTGAATaGCAGGATGTAAACAGAGATCCACATATAGGGTCCATCTCAGAG | + |
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Preference number: 1 (lower is better) Translates to: CRCLSQLCNSQSELE*QDVNRDPHIGSISE Trigger: CTCTGAGATGGACCCTATATGTGGATCTCTGTTTACATCCTGGCATTCAAGCTCTGATTGGCTGTTGCAAAGTTGGCTTAGACAGCGACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085050.4 |
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| 3UTR GCA 90 bp | CTGGGCACTTTCTGTGCAGGTATATGTTTATTGATCCTTTGCTCCTaGCTCCTGTTTTGGTTGGTGGTGTTCATCTTTTGTGTGAGGTTG | + |
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Preference number: 1 (lower is better) Translates to: LGTFCAGICLLILCS*LLFWLVVFIFCVRL Trigger: CAACCTCACACAAAAGATGAACACCACCAACCAAAACAGGAGGCAGGAGCAAAGGATCAATAAACATATACCTGCACAGAAAGTGCCCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085050.4 |
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| 3UTR CCA 90 bp | TGTGCAGGTATATGTTTATTGATCCTTTGCTCCTGCCTCCTGTTTTaGTTGGTGGTGTTCATCTTTTGTGTGAGGTTGGTCAGCTGGGAT | + |
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Preference number: 1 (lower is better) Translates to: CAGICLLILCSCLLF*LVVFIFCVRLVSWD Trigger: ATCCCAGCTGACCAACCTCACACAAAAGATGAACACCACCAACCAAAACAGGAGGCAGGAGCAAAGGATCAATAAACATATACCTGCACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085050.4 |
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| 3UTR-3UTR CCA 90 bp | AGGAGTGCCAGGGGGAGAGGAGCTGCTCTGACCTCCAGTCCCATGCAGCTGCAGGCAAAGAGGCTTTCATaGTCCCATCAAGACTGTGCA | + |
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Preference number: 2 (lower is better) Translates to: RSARGRGAALTSSPMQLQAKRLS*SHQDCA Trigger: TGCACAGTCTTGATGGGACCATGAAAGCCTCTTTGC...CTGCAGCTGCATGGGACTGGAGGTCAGAGCAGCTCCTCTCCCCCTGGCACTCCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000085050.4 |
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| 3UTR-3UTR GCA 90 bp | GAGAGTAGGAGTGCCAGGGGGAGAGGAGCTGCTCTGACCTCCAGTCCCATGCAGCTGTGTATTTGCCAATaGCTAGGTTTGGGATACAGA | + |
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Preference number: 2 (lower is better) Translates to: ESRSARGRGAALTSSPMQLCICQ*LGLGYR Trigger: TCTGTATCCCAAACCTAGGCATTGGCAAATACACAG...CTGCATGGGACTGGAGGTCAGAGCAGCTCCTCTCCCCCTGGCACTCCTACTCTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000085050.4 |
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| 3UTR-3UTR CCA 90 bp | CTGTGCCAGATATTGGCAAGGTCAGGGGACCCTGCAAGGGACACTGAGTGGCAATCTCAGATGCTGGAATaGCATTTAGTGCAGCAGGTT | + |
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Preference number: 2 (lower is better) Translates to: LCQILARSGDPARDTEWQSQMLE*HLVQQV Trigger: AACCTGCTGCACTAAATGCCATTCCAGCATCTGAGA...TTGCCACTCAGTGTCCCTTGCAGGGTCCCCTGACCTTGCCAATATCTGGCACAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085050.4 |
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| 3UTR CAA 90 bp | TCCTGCCTCCTGTTTTGGTTGGTGGTGTTCATCTTTTGTGTGAGGTaGGTCAGCTGGGATCTTAGAGAGAGAGAGAGAGTAGGAGTGCCA | + |
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Preference number: 2 (lower is better) Translates to: SCLLFWLVVFIFCVR*VSWDLRERERVGVP Trigger: TGGCACTCCTACTCTCTCTCTCTCTCTAAGATCCCAGCTGACCAACCTCACACAAAAGATGAACACCACCAACCAAAACAGGAGGCAGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085050.4 |
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| 3UTR-3UTR TCA 90 bp | GTGGTGTTCATCTTTTGTGTGAGGTTGGTCAGCTGGGATCTTAGAGAGAGAGAGCAGCCAATCAGAGCTTaGATGCCAGGATGTAAACAG | + |
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Preference number: 2 (lower is better) Translates to: VVFIFCVRLVSWDLREREQPIRA*MPGCKQ Trigger: CTGTTTACATCCTGGCATTCAAGCTCTGATTGGCTG...CTCTCTCTCTCTAAGATCCCAGCTGACCAACCTCACACAAAAGATGAACACCAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085050.4 |
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| 3UTR-3UTR GCA 90 bp | CTGCCTGGGCACTTTCTGTGCAGGTATATGTTTATTGATCCTTTGCTCCTGCCTTGGACTACAACTCTGTaGCAGATATTGGCAAGGTCA | + |
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Preference number: 2 (lower is better) Translates to: LPGHFLCRYMFIDPLLLPWTTTL*QILARS Trigger: TGACCTTGCCAATATCTGGCACAGAGTTGTAGTCCA...AGGCAGGAGCAAAGGATCAATAAACATATACCTGCACAGAAAGTGCCCAGGCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085050.4 |
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| 3UTR-3UTR CCA 90 bp | CCCATCAAGACTGTGCAAGCAGATGTGCTCAGAGCCTATACTGGAACTCTGTGTTCCATCTCAGAGTCCTaGGCAGAATATTCAGAACTT | + |
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Preference number: 2 (lower is better) Translates to: PIKTVQADVLRAYTGTLCSISES*AEYSEL Trigger: AAGTTCTGAATATTCTGCCCAGGACTCTGAGATGGA...ACACAGAGTTCCAGTATAGGCTCTGAGCACATCTGCTTGCACAGTCTTGATGGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085050.4 |
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| 3UTR CAA 90 bp | ACACTGCCTGGGCACTTTCTGTGCAGGTATATGTTTATTGATCCTTaGCTCCTGCCTCCTGTTTTGGTTGGTGGTGTTCATCTTTTGTGT | + |
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Preference number: 2 (lower is better) Translates to: TLPGHFLCRYMFIDP*LLPPVLVGGVHLLC Trigger: ACACAAAAGATGAACACCACCAACCAAAACAGGAGGCAGGAGCAAAGGATCAATAAACATATACCTGCACAGAAAGTGCCCAGGCAGTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085050.4 |
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| 3UTR-3UTR GCA 90 bp | AACTCTGTGTATTTGCCAATGCCTAGGTTTGGGATACAGATACATAAAGAGGAGGTCCAAAGTCTTCTGTaGATGTGGGAGCCACGGAGA | + |
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Preference number: 2 (lower is better) Translates to: NSVYLPMPRFGIQIHKEEVQSLL*MWEPRR Trigger: TCTCCGTGGCTCCCACATGCACAGAAGACTTTGGAC...CTCCTCTTTATGTATCTGTATCCCAAACCTAGGCATTGGCAAATACACAGAGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085050.4 |
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| 3UTR CAA 90 bp | CTCAGAGCCTATACTGGAACTCTGTGTATTTGCCAATGCCTAGGTTaGGGATACAGATACATAAAGAGGAGTCACCAGGGAAGAAGAATA | + |
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Preference number: 2 (lower is better) Translates to: LRAYTGTLCICQCLG*GYRYIKRSHQGRRI Trigger: TATTCTTCTTCCCTGGTGACTCCTCTTTATGTATCTGTATCCCAAACCTAGGCATTGGCAAATACACAGAGTTCCAGTATAGGCTCTGAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085050.4 |
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| 3UTR-3UTR GCA 90 bp | CATAACCTAAGAGCATGGCACCAGGTCTTCTCAGATGCTGGAATGGCATTTAGTCAATCAGAGCTTGAATaGCAGGATGTAAACAGAGAT | + |
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Preference number: 2 (lower is better) Translates to: HNLRAWHQVFSDAGMAFSQSELE*QDVNRD Trigger: ATCTCTGTTTACATCCTGGCATTCAAGCTCTGATTG...ACTAAATGCCATTCCAGCATCTGAGAAGACCTGGTGCCATGCTCTTAGGTTATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085050.4 |
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| 3UTR TCA 72 bp | GAGAGAGTAGGAGTGCCAGGGGGAGAGGAGCTGCTCTaGCCTCCAGTCCCATGCAGCTGCAGGAATTTGGAC | + |
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Preference number: 3 (lower is better) Translates to: ERVGVPGGEELL*PPVPCSCRNLD Trigger: GTCCAAATTCCTGCAGCTGCATGGGACTGGAGGTCAGAGCAGCTCCTCTCCCCCTGGCACTCCTACTCTCTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000085050.4 |
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| 3UTR GCA 72 bp | TCCCATGCAGCTGCAGGAATTTGGACTACAACTCTGTaGCAGATATTGGCAAGGTCAGGGGACCCTGCAAGG | + |
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Preference number: 3 (lower is better) Translates to: SHAAAGIWTTTL*QILARSGDPAR Trigger: CCTTGCAGGGTCCCCTGACCTTGCCAATATCTGGCACAGAGTTGTAGTCCAAATTCCTGCAGCTGCATGGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085050.4 |
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| 3UTR CCA 72 bp | CTGCAGGAATTTGGACTACAACTCTGTGCCAGATATTaGCAAGGTCAGGGGACCCTGCAAGGGACACTGAGT | + |
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Preference number: 3 (lower is better) Translates to: LQEFGLQLCARY*QGQGTLQGTLS Trigger: ACTCAGTGTCCCTTGCAGGGTCCCCTGACCTTGCCAATATCTGGCACAGAGTTGTAGTCCAAATTCCTGCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085050.4 |
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| 3UTR-3UTR CAA 90 bp | TCTCAGATGCTGGAATGGCATTTAGTGCAGCAGGTTCCCCTTTCAGTCCTGGGCCTGTCTAAGCCAACTTaGCAACAGCCAATCAGAGCT | + |
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Preference number: 3 (lower is better) Translates to: SQMLEWHLVQQVPLSVLGLSKPT*QQPIRA Trigger: AGCTCTGATTGGCTGTTGCAAAGTTGGCTTAGACAG...GCCCAGGACTGAAAGGGGAACCTGCTGCACTAAATGCCATTCCAGCATCTGAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085050.4 |
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| 3UTR CCA 72 bp | GGGCCTGATTCTCATGGATTGGCAAAGAGGCTTTCATaGTCCCATCAAGACTGTGCAAGCAGATGTGCTCAG | + |
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Preference number: 3 (lower is better) Translates to: GPDSHGLAKRLS*SHQDCASRCAQ Trigger: CTGAGCACATCTGCTTGCACAGTCTTGATGGGACCATGAAAGCCTCTTTGCCAATCCATGAGAATCAGGCCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085050.4 |
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| 3UTR CCA 72 bp | TGCTCTGACCTCCAGTCCCATGCAGCTGCAGGAATTTaGACTACAACTCTGTGCCAGATATTGGCAAGGTCA | + |
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Preference number: 3 (lower is better) Translates to: CSDLQSHAAAGI*TTTLCQILARS Trigger: TGACCTTGCCAATATCTGGCACAGAGTTGTAGTCCAAATTCCTGCAGCTGCATGGGACTGGAGGTCAGAGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085050.4 |
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| 3UTR TCA 72 bp | ATGTTGTCACTAGAGGCAACCCCTTCCAACATGAGCTaGGATAACACTGCCTGGGCACTTTCTGTGCAGGTA | + |
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Preference number: 3 (lower is better) Translates to: MLSLEATPSNMS*DNTAWALSVQV Trigger: TACCTGCACAGAAAGTGCCCAGGCAGTGTTATCTCAGCTCATGTTGGAAGGGGTTGCCTCTAGTGACAACAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085050.4 |
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| 3UTR TCA 72 bp | ACTGCCTGGGCACTTTCTGTGCAGGTATATGTTTATTaGTCCTTTGCTCCTGCCTCCTGTTTTGGTTGGTGG | + |
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Preference number: 3 (lower is better) Translates to: TAWALSVQVYVY*SFAPASCFGWW Trigger: CCACCAACCAAAACAGGAGGCAGGAGCAAAGGATCAATAAACATATACCTGCACAGAAAGTGCCCAGGCAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085050.4 |
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| 3UTR GCA 72 bp | GCTTTCATGGTCCCATCAAGACTGTGCAAGCAGATGTaGTCAGAGCCTATACTGGAACTCTGTGTATTTGCC | + |
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Preference number: 3 (lower is better) Translates to: AFMVPSRLCKQM*SEPILELCVFA Trigger: GGCAAATACACAGAGTTCCAGTATAGGCTCTGAGCACATCTGCTTGCACAGTCTTGATGGGACCATGAAAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085050.4 |
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| 3UTR CCA 72 bp | CAAGACTGTGCAAGCAGATGTGCTCAGAGCCTATACTaGAACTCTGTGTATTTGCCAATGCCTAGGTTTGGG | + |
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Preference number: 3 (lower is better) Translates to: QDCASRCAQSLY*NSVYLPMPRFG Trigger: CCCAAACCTAGGCATTGGCAAATACACAGAGTTCCAGTATAGGCTCTGAGCACATCTGCTTGCACAGTCTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085050.4 |
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| 3UTR GCA 72 bp | CTAAGCCAACTTTGCAACAGCCAATCAGAGCTTGAATaGCAGGATGTAAACAGAGATCCACATATAGGGTCC | + |
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Preference number: 3 (lower is better) Translates to: LSQLCNSQSELE*QDVNRDPHIGS Trigger: GGACCCTATATGTGGATCTCTGTTTACATCCTGGCATTCAAGCTCTGATTGGCTGTTGCAAAGTTGGCTTAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085050.4 |
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| 3UTR TCA 72 bp | GATATAGGTCAGAGGGCCATCAGAGGAGTCACAGAATaGGTGACAATCTCTACTACTATGTTGTCACTAGAG | + |
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Preference number: 3 (lower is better) Translates to: DIGQRAIRGVTE*VTISTTMLSLE Trigger: CTCTAGTGACAACATAGTAGTAGAGATTGTCACTCATTCTGTGACTCCTCTGATGGCCCTCTGACCTATATC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085050.4 |
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| 3UTR GCA 72 bp | TTCTGTGCAGGTATATGTTTATTGATCCTTTGCTCCTaGCTCCTGTTTTGGTTGGTGGTGTTCATCTTTTGT | + |
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Preference number: 3 (lower is better) Translates to: FCAGICLLILCS*LLFWLVVFIFC Trigger: ACAAAAGATGAACACCACCAACCAAAACAGGAGGCAGGAGCAAAGGATCAATAAACATATACCTGCACAGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085050.4 |
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| CDS-3UTR TCA 90 bp | AGGAGTGCCAGGGGGAGAGGAGCTGCTCTGACCTCCAGTCCCATGCAGCTGCAGCCTGGTCAGGGAGAATaGACAGGGCGCTGGCATTTC | + |
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Preference number: 4 (lower is better) Translates to: RSARGRGAALTSSPMQLQPGQGE*TGRWHF Trigger: GAAATGCCAGCGCCCTGTTCATTCTCCCTGACCAGG...CTGCAGCTGCATGGGACTGGAGGTCAGAGCAGCTCCTCTCCCCCTGGCACTCCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000085050.4 |
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| CDS-3UTR GCA 90 bp | AGGAGTGCCAGGGGGAGAGGAGCTGCTCTGACCTCCAGTCCCATGCAGCTGCAGTCAGTTCCACCACAGTaGAGGACAGCTCCTCATCCC | + |
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Preference number: 4 (lower is better) Translates to: RSARGRGAALTSSPMQLQSVPPQ*RTAPHP Trigger: GGGATGAGGAGCTGTCCTGCACTGTGGTGGAACTGA...CTGCAGCTGCATGGGACTGGAGGTCAGAGCAGCTCCTCTCCCCCTGGCACTCCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000085050.4 |
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| CDS-3UTR TCA 90 bp | ATATTGGCAAGGTCAGGGGACCCTGCAAGGGACACTGAGTGGCAAAGCCTGCAGGATGGCCAAGGCAGCTaGGATGCTAAGTGGGGAGAA | + |
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Preference number: 4 (lower is better) Translates to: ILARSGDPARDTEWQSLQDGQGS*DAKWGE Trigger: TTCTCCCCACTTAGCATCTCAGCTGCCTTGGCCATC...CTGCAGGCTTTGCCACTCAGTGTCCCTTGCAGGGTCCCCTGACCTTGCCAATAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085050.4 |
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| CDS-3UTR GCA 90 bp | CTGTGCCAGATATTGGCAAGGTCAGGGGACCCTGCAAGGGACACTGAGTGGCAACTCAGGGTCTCTGGTTaGAAGCTGGCTTCTACCTGC | + |
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Preference number: 4 (lower is better) Translates to: LCQILARSGDPARDTEWQLRVSG*KLASTC Trigger: GCAGGTAGAAGCCAGCTTGCAACCAGAGACCCTGAG...TTGCCACTCAGTGTCCCTTGCAGGGTCCCCTGACCTTGCCAATATCTGGCACAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085050.4 |
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| CDS-3UTR GCA 90 bp | CTGTGCCAGATATTGGCAAGGTCAGGGGACCCTGCAAGGGACACTGAGTGGCAACAGCAACTCCTTCTGTaGCTGTCTCAGCCACGTCCA | + |
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Preference number: 4 (lower is better) Translates to: LCQILARSGDPARDTEWQQQLLL*LSQPRP Trigger: TGGACGTGGCTGAGACAGGCACAGAAGGAGTTGCTG...TTGCCACTCAGTGTCCCTTGCAGGGTCCCCTGACCTTGCCAATATCTGGCACAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085050.4 |
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| CDS-3UTR GCA 90 bp | GGCAAAGAGGCTTTCATGGTCCCATCAAGACTGTGCAAGCAGATGTGCTCAGAGCAGGGTGTTGCCCTTTaGTCCCAGGGACACGATGGC | + |
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Preference number: 4 (lower is better) Translates to: GKEAFMVPSRLCKQMCSEQGVAL*SQGHDG Trigger: GCCATCGTGTCCCTGGGAGCAAAGGGCAACACCCTG...CTCTGAGCACATCTGCTTGCACAGTCTTGATGGGACCATGAAAGCCTCTTTGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085050.4 |
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| CDS-3UTR CCA 90 bp | ATATTGGCAAGGTCAGGGGACCCTGCAAGGGACACTGAGTGGCAAAGCCTGCAGGCTCACCCATTTTCCTaGGCCTCAGAGAGTTCTTCC | + |
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Preference number: 4 (lower is better) Translates to: ILARSGDPARDTEWQSLQAHPFS*ASESSS Trigger: GGAAGAACTCTCTGAGGCCCAGGAAAATGGGTGAGC...CTGCAGGCTTTGCCACTCAGTGTCCCTTGCAGGGTCCCCTGACCTTGCCAATAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085050.4 |
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| CDS-3UTR CCA 90 bp | CAAAGAGGCTTTCATGGTCCCATCAAGACTGTGCAAGCAGATGTGCTCAGAGCCACCTGCTCCCCTGGATaGCTGAGCCTCTGTAGGAGA | + |
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Preference number: 4 (lower is better) Translates to: QRGFHGPIKTVQADVLRATCSPG*LSLCRR Trigger: TCTCCTACAGAGGCTCAGCCATCCAGGGGAGCAGGT...GGCTCTGAGCACATCTGCTTGCACAGTCTTGATGGGACCATGAAAGCCTCTTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085050.4 |
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| 3UTR CAA 72 bp | GCTGCAGGAATTTGGACTACAACTCTGTGCCAGATATaGGCAAGGTCAGGGGACCCTGCAAGGGACACTGAG | + |
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Preference number: 4 (lower is better) Translates to: AAGIWTTTLCQI*ARSGDPARDTE Trigger: CTCAGTGTCCCTTGCAGGGTCCCCTGACCTTGCCAATATCTGGCACAGAGTTGTAGTCCAAATTCCTGCAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085050.4 |
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| CDS-3UTR GCA 90 bp | CTGTGCCAGATATTGGCAAGGTCAGGGGACCCTGCAAGGGACACTGAGTGGCAAGCCAGAATCTGCAGGTaGTTTTCAACAAACAGGGCA | + |
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Preference number: 4 (lower is better) Translates to: LCQILARSGDPARDTEWQARICR*FSTNRA Trigger: TGCCCTGTTTGTTGAAAAGCACCTGCAGATTCTGGC...TTGCCACTCAGTGTCCCTTGCAGGGTCCCCTGACCTTGCCAATATCTGGCACAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085050.4 |
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| CDS-3UTR CCA 90 bp | CTGCCTGGGCACTTTCTGTGCAGGTATATGTTTATTGATCCTTTGCTCCTGCCTGTGAAGGCCTCAGCCTaGTACAGAGCCCTTGCCTTC | + |
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Preference number: 4 (lower is better) Translates to: LPGHFLCRYMFIDPLLLPVKASA*YRALAF Trigger: GAAGGCAAGGGCTCTGTACCAGGCTGAGGCCTTCAC...AGGCAGGAGCAAAGGATCAATAAACATATACCTGCACAGAAAGTGCCCAGGCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085050.4 |
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| CDS-3UTR TCA 90 bp | AGATACATAAAGAGGAGTCACCAGGGAAGAAGAATAAAGGCAGATTCCAGGTTCGGGCACTGCCTGTGCTaGTCTGTACCTGCTCCCCTG | + |
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Preference number: 4 (lower is better) Translates to: RYIKRSHQGRRIKADSRFGHCLC*SVPAPL Trigger: CAGGGGAGCAGGTACAGATCAGCACAGGCAGTGCCC...GAACCTGGAATCTGCCTTTATTCTTCTTCCCTGGTGACTCCTCTTTATGTATCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085050.4 |
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| CDS-3UTR GCA 90 bp | CATAACCTAAGAGCATGGCACCAGGTCTTCTCAGATGCTGGAATGGCATTTAGTTCTCTTCCAGGGTGTTaGCCTTTGCTCCCAGGGACA | + |
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Preference number: 4 (lower is better) Translates to: HNLRAWHQVFSDAGMAFSSLPGC*PLLPGT Trigger: TGTCCCTGGGAGCAAAGGGCAACACCCTGGAAGAGA...ACTAAATGCCATTCCAGCATCTGAGAAGACCTGGTGCCATGCTCTTAGGTTATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085050.4 |
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| CDS-3UTR GCA 90 bp | AGATACATAAAGAGGAGTCACCAGGGAAGAAGAATAAAGGCAGATTCCAGGTTCCTGGCTTCTACCTGCTaGATCCTGCCCTGGTCAGGG | + |
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Preference number: 4 (lower is better) Translates to: RYIKRSHQGRRIKADSRFLASTC*ILPWSG Trigger: CCCTGACCAGGGCAGGATGCAGCAGGTAGAAGCCAG...GAACCTGGAATCTGCCTTTATTCTTCTTCCCTGGTGACTCCTCTTTATGTATCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085050.4 |
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| CDS-3UTR CCA 90 bp | CATAACCTAAGAGCATGGCACCAGGTCTTCTCAGATGCTGGAATGGCATTTAGTTGTCCAAAGCCCTGGTaGATGTCTGCTTCAGGGGTC | + |
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Preference number: 4 (lower is better) Translates to: HNLRAWHQVFSDAGMAFSCPKPW*MSASGV Trigger: GACCCCTGAAGCAGACATCCACCAGGGCTTTGGACA...ACTAAATGCCATTCCAGCATCTGAGAAGACCTGGTGCCATGCTCTTAGGTTATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085050.4 |
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| CDS-3UTR TCA 90 bp | CCCATCAAGACTGTGCAAGCAGATGTGCTCAGAGCCTATACTGGAACTCTGTGTTCAGGAATGTCCTGTTaGACCACAGACTGGTTCTTC | + |
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Preference number: 4 (lower is better) Translates to: PIKTVQADVLRAYTGTLCSGMSC*TTDWFF Trigger: GAAGAACCAGTCTGTGGTTCAACAGGACATTCCTGA...ACACAGAGTTCCAGTATAGGCTCTGAGCACATCTGCTTGCACAGTCTTGATGGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085050.4 |
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| CDS-3UTR GCA 90 bp | CAAAGAGGCTTTCATGGTCCCATCAAGACTGTGCAAGCAGATGTGCTCAGAGCCTGTCTCTTTCTAATGTaGCATCTGGGAAGCAGAGGA | + |
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Preference number: 4 (lower is better) Translates to: QRGFHGPIKTVQADVLRACLFLM*HLGSRG Trigger: TCCTCTGCTTCCCAGATGGCACATTAGAAAGAGACA...GGCTCTGAGCACATCTGCTTGCACAGTCTTGATGGGACCATGAAAGCCTCTTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085050.4 |
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| CDS-3UTR GCA 90 bp | AGATACATAAAGAGGAGTCACCAGGGAAGAAGAATAAAGGCAGATTCCAGGTTCGTGGCCTCGAGAGGCTaGTGGAAGTCTGCTGTGAAG | + |
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Preference number: 4 (lower is better) Translates to: RYIKRSHQGRRIKADSRFVASRG*WKSAVK Trigger: CTTCACAGCAGACTTCCAGCAGCCTCTCGAGGCCAC...GAACCTGGAATCTGCCTTTATTCTTCTTCCCTGGTGACTCCTCTTTATGTATCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085050.4 |
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| 3UTR CAA 72 bp | CACTGCCTGGGCACTTTCTGTGCAGGTATATGTTTATaGATCCTTTGCTCCTGCCTCCTGTTTTGGTTGGTG | + |
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Preference number: 4 (lower is better) Translates to: HCLGTFCAGICL*ILCSCLLFWLV Trigger: CACCAACCAAAACAGGAGGCAGGAGCAAAGGATCAATAAACATATACCTGCACAGAAAGTGCCCAGGCAGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085050.4 |
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| CDS-3UTR CCA 90 bp | GACACAGATAGTCCAAAGTCTTCTGTGCATGTGGGAGCCACGGAGATAGTCAATTTTAATGCCCAGCTCTaGAAGGATGTTCTTCAGGCT | + |
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Preference number: 4 (lower is better) Translates to: DTDSPKSSVHVGATEIVNFNAQL*KDVLQA Trigger: AGCCTGAAGAACATCCTTCCAGAGCTGGGCATTAAA...ATTGACTATCTCCGTGGCTCCCACATGCACAGAAGACTTTGGACTATCTGTGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085050.4 |
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| CDS-3UTR GCA 90 bp | TGCAGGTATATGTTTATTGATCCTTTGCTCCTGCCTCCTGTTTTGGTTGGTGGTCTTCTCCTGGAATTCTaGCAGAATCTGCAGGTGCTT | + |
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Preference number: 4 (lower is better) Translates to: CRYMFIDPLLLPPVLVGGLLLEF*QNLQVL Trigger: AAGCACCTGCAGATTCTGGCAGAATTCCAGGAGAAG...ACCACCAACCAAAACAGGAGGCAGGAGCAAAGGATCAATAAACATATACCTGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085050.4 |
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| 3UTR CAA 72 bp | CTGTTTTGGTTGGTGGTGTTCATCTTTTGTGTGAGGTaGGTCAGCTGGGATCTTAGAGAGAGAGAGAGAGTA | + |
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Preference number: 4 (lower is better) Translates to: LFWLVVFIFCVR*VSWDLRERERV Trigger: TACTCTCTCTCTCTCTCTAAGATCCCAGCTGACCAACCTCACACAAAAGATGAACACCACCAACCAAAACAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085050.4 |
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| 3UTR CAA 72 bp | GGGCACTTTCTGTGCAGGTATATGTTTATTGATCCTTaGCTCCTGCCTCCTGTTTTGGTTGGTGGTGTTCAT | + |
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Preference number: 4 (lower is better) Translates to: GHFLCRYMFIDP*LLPPVLVGGVH Trigger: ATGAACACCACCAACCAAAACAGGAGGCAGGAGCAAAGGATCAATAAACATATACCTGCACAGAAAGTGCCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085050.4 |
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| CDS-3UTR GCA 90 bp | CTGCCTGGGCACTTTCTGTGCAGGTATATGTTTATTGATCCTTTGCTCCTGCCTAATTCTGCCAGAATCTaGAGGTGCTTTTCAACAAAC | + |
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Preference number: 4 (lower is better) Translates to: LPGHFLCRYMFIDPLLLPNSARI*RCFSTN Trigger: GTTTGTTGAAAAGCACCTGCAGATTCTGGCAGAATT...AGGCAGGAGCAAAGGATCAATAAACATATACCTGCACAGAAAGTGCCCAGGCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085050.4 |
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| CDS-3UTR CCA 90 bp | AGGCTTTCATGGTCCCATCAAGACTGTGCAAGCAGATGTGCTCAGAGCCTATACGACAATATTTGTATCTaGATTCTTCAAAGCCAGCTT | + |
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Preference number: 4 (lower is better) Translates to: RLSWSHQDCASRCAQSLYDNICI*ILQSQL Trigger: AAGCTGGCTTTGAAGAATCCAGATACAAATATTGTC...GTATAGGCTCTGAGCACATCTGCTTGCACAGTCTTGATGGGACCATGAAAGCCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085050.4 |
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| 3UTR CAA 72 bp | TATACTGGAACTCTGTGTATTTGCCAATGCCTAGGTTaGGGATACAGATACATAAAGAGGAGTCACCAGGGA | + |
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Preference number: 4 (lower is better) Translates to: YTGTLCICQCLG*GYRYIKRSHQG Trigger: TCCCTGGTGACTCCTCTTTATGTATCTGTATCCCAAACCTAGGCATTGGCAAATACACAGAGTTCCAGTATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085050.4 |
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| 3UTR CAA 72 bp | TATATGTTTATTGATCCTTTGCTCCTGCCTCCTGTTTaGGTTGGTGGTGTTCATCTTTTGTGTGAGGTTGGT | + |
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Preference number: 4 (lower is better) Translates to: YMFIDPLLLPPV*VGGVHLLCEVG Trigger: ACCAACCTCACACAAAAGATGAACACCACCAACCAAAACAGGAGGCAGGAGCAAAGGATCAATAAACATATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085050.4 |
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| CDS GCA 90 bp | TTCTTCCACTTCCTCAGGGTCTCTGGTTGCAAGCTGGCTTCTACCTaGTGCATCCTGCCCTGGTCAGGGAGAATGAACAGGGCGCTGGCA | + |
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Preference number: 5 (lower is better) Translates to: FFHFLRVSGCKLAST*CILPWSGRMNRALA Trigger: TGCCAGCGCCCTGTTCATTCTCCCTGACCAGGGCAGGATGCAGCAGGTAGAAGCCAGCTTGCAACCAGAGACCCTGAGGAAGTGGAAGAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085050.4 |
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| CDS GCA 90 bp | TTCCTGGGCCTCAGAGAGTTCTTCCACTTCCTCAGGGTCTCTGGTTaGAAGCTGGCTTCTACCTGCTGCATCCTGCCCTGGTCAGGGAGA | + |
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Preference number: 5 (lower is better) Translates to: FLGLREFFHFLRVSG*KLASTCCILPWSGR Trigger: TCTCCCTGACCAGGGCAGGATGCAGCAGGTAGAAGCCAGCTTGCAACCAGAGACCCTGAGGAAGTGGAAGAACTCTCTGAGGCCCAGGAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085050.4 |
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| CDS CCA 90 bp | CATTTTCCTGGGCCTCAGAGAGTTCTTCCACTTCCTCAGGGTCTCTaGTTGCAAGCTGGCTTCTACCTGCTGCATCCTGCCCTGGTCAGG | + |
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Preference number: 5 (lower is better) Translates to: HFPGPQRVLPLPQGL*LQAGFYLLHPALVR Trigger: CCTGACCAGGGCAGGATGCAGCAGGTAGAAGCCAGCTTGCAACCAGAGACCCTGAGGAAGTGGAAGAACTCTCTGAGGCCCAGGAAAATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085050.4 |
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| CDS-3UTR CAA 90 bp | AGAGAGAGTAGGAGTGCCAGGGGGAGAGGAGCTGCTCTGACCTCCAGTCCCATGAAGGCAAAGTCAGTGTaGATGGAGGCCAATGTGAGA | + |
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Preference number: 5 (lower is better) Translates to: RESRSARGRGAALTSSPMKAKSV*MEANVR Trigger: TCTCACATTGGCCTCCATCAACACTGACTTTGCCTT...CATGGGACTGGAGGTCAGAGCAGCTCCTCTCCCCCTGGCACTCCTACTCTCTCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000085050.4 |
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| CDS TCA 90 bp | TCTGTGCCTGTCTCAGCCACGTCCAGCACAGCCTTGTGGACCATCTaGGACACTATCAGGTCCTTGGTTCCTGTGATCCCAGATAGGTCA | + |
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Preference number: 5 (lower is better) Translates to: SVPVSATSSTALWTI*DTIRSLVPVIPDRS Trigger: TGACCTATCTGGGATCACAGGAACCAAGGACCTGATAGTGTCTCAGATGGTCCACAAGGCTGTGCTGGACGTGGCTGAGACAGGCACAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085050.4 |
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| CDS GCA 90 bp | CTGCTGGAAGTCTGCTGTGAAGGCCTCAGCCTGGTACAGAGCCCTTaGCTTCTCCTGGAATTCTGCCAGAATCTGCAGGTGCTTTTCAAC | + |
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Preference number: 5 (lower is better) Translates to: LLEVCCEGLSLVQSP*LLLEFCQNLQVLFN Trigger: GTTGAAAAGCACCTGCAGATTCTGGCAGAATTCCAGGAGAAGGCAAGGGCTCTGTACCAGGCTGAGGCCTTCACAGCAGACTTCCAGCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085050.4 |
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| CDS CCA 90 bp | TGCTCCCCTGGATGGCTGAGCCTCTGTAGGAGATGTCCAAAGCCCTaGTGGATGTCTGCTTCAGGGGTCTCTGTGAGATTGAAGTTGAGA | + |
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Preference number: 5 (lower is better) Translates to: CSPGWLSLCRRCPKP*WMSASGVSVRLKLR Trigger: TCTCAACTTCAATCTCACAGAGACCCCTGAAGCAGACATCCACCAGGGCTTTGGACATCTCCTACAGAGGCTCAGCCATCCAGGGGAGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085050.4 |
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| CDS CCA 90 bp | TCTGCTGTGAAGGCCTCAGCCTGGTACAGAGCCCTTGCCTTCTCCTaGAATTCTGCCAGAATCTGCAGGTGCTTTTCAACAAACAGGGCA | + |
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Preference number: 5 (lower is better) Translates to: SAVKASAWYRALAFS*NSARICRCFSTNRA Trigger: TGCCCTGTTTGTTGAAAAGCACCTGCAGATTCTGGCAGAATTCCAGGAGAAGGCAAGGGCTCTGTACCAGGCTGAGGCCTTCACAGCAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085050.4 |
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| CDS-3UTR CAA 90 bp | AACTCTGTGTATTTGCCAATGCCTAGGTTTGGGATACAGATACATAAAGAGGAGCCTCAGGGTCTCTGGTaGCAAGCTGGCTTCTACCTG | + |
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Preference number: 5 (lower is better) Translates to: NSVYLPMPRFGIQIHKEEPQGLW*QAGFYL Trigger: CAGGTAGAAGCCAGCTTGCAACCAGAGACCCTGAGG...CTCCTCTTTATGTATCTGTATCCCAAACCTAGGCATTGGCAAATACACAGAGTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085050.4 |
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| CDS-3UTR CAA 90 bp | CTGCCTGGGCACTTTCTGTGCAGGTATATGTTTATTGATCCTTTGCTCCTGCCTATCAGGAATGTCCTGTaGAACCACAGACTGGTTCTT | + |
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Preference number: 5 (lower is better) Translates to: LPGHFLCRYMFIDPLLLPIRNVL*NHRLVL Trigger: AAGAACCAGTCTGTGGTTCAACAGGACATTCCTGAT...AGGCAGGAGCAAAGGATCAATAAACATATACCTGCACAGAAAGTGCCCAGGCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085050.4 |
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| CDS-3UTR CAA 90 bp | GTCTTCTCAGATGCTGGAATGGCATTTAGTGCAGCAGGTTCCCCTTTCAGTCCTGGGAGAAGACAATATTaGTATCTGGATTCTTCAAAG | + |
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Preference number: 5 (lower is better) Translates to: VFSDAGMAFSAAGSPFSPGRRQY*YLDSSK Trigger: CTTTGAAGAATCCAGATACAAATATTGTCTTCTCCC...AGGACTGAAAGGGGAACCTGCTGCACTAAATGCCATTCCAGCATCTGAGAAGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085050.4 |
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| CDS CCA 90 bp | GCCAATGTGAGACTGTCGAGTTGTGTCCCATTTTCTTTGTCTTTATaGAATAAAGTGTCTCTTTCTAATGTGCCATCTGGGAAGCAGAGG | + |
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Preference number: 5 (lower is better) Translates to: ANVRLSSCVPFSLSL*NKVSLSNVPSGKQR Trigger: CCTCTGCTTCCCAGATGGCACATTAGAAAGAGACACTTTATTCCATAAAGACAAAGAAAATGGGACACAACTCGACAGTCTCACATTGGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085050.4 |
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| CDS GCA 72 bp | GATGAGCTTTGTGGCCTCGAGAGGCTGCTGGAAGTCTaGTGTGAAGGCCTCAGCCTGGTACAGAGCCCTTGC | + |
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Preference number: 6 (lower is better) Translates to: DELCGLERLLEV*CEGLSLVQSPC Trigger: GCAAGGGCTCTGTACCAGGCTGAGGCCTTCACAGCAGACTTCCAGCAGCCTCTCGAGGCCACAAAGCTCATC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085050.4 |
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| CDS CCA 72 bp | GCACTGCCTGTGCTGATCTGTACCTGCTCCCCTGGATaGCTGAGCCTCTGTAGGAGATGTCCAAAGCCCTGG | + |
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Preference number: 6 (lower is better) Translates to: ALPVLICTCSPG*LSLCRRCPKPW Trigger: CCAGGGCTTTGGACATCTCCTACAGAGGCTCAGCCATCCAGGGGAGCAGGTACAGATCAGCACAGGCAGTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085050.4 |
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| CDS CAA 90 bp | TTTCCTGGGCCTCAGAGAGTTCTTCCACTTCCTCAGGGTCTCTGGTaGCAAGCTGGCTTCTACCTGCTGCATCCTGCCCTGGTCAGGGAG | + |
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Preference number: 6 (lower is better) Translates to: FPGPQRVLPLPQGLW*QAGFYLLHPALVRE Trigger: CTCCCTGACCAGGGCAGGATGCAGCAGGTAGAAGCCAGCTTGCAACCAGAGACCCTGAGGAAGTGGAAGAACTCTCTGAGGCCCAGGAAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085050.4 |
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| CDS CCA 72 bp | AGAGGCTGCTGGAAGTCTGCTGTGAAGGCCTCAGCCTaGTACAGAGCCCTTGCCTTCTCCTGGAATTCTGCC | + |
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Preference number: 6 (lower is better) Translates to: RGCWKSAVKASA*YRALAFSWNSA Trigger: GGCAGAATTCCAGGAGAAGGCAAGGGCTCTGTACCAGGCTGAGGCCTTCACAGCAGACTTCCAGCAGCCTCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085050.4 |
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| CDS CCA 72 bp | GGGCCTCAGAGAGTTCTTCCACTTCCTCAGGGTCTCTaGTTGCAAGCTGGCTTCTACCTGCTGCATCCTGCC | + |
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Preference number: 6 (lower is better) Translates to: GPQRVLPLPQGL*LQAGFYLLHPA Trigger: GGCAGGATGCAGCAGGTAGAAGCCAGCTTGCAACCAGAGACCCTGAGGAAGTGGAAGAACTCTCTGAGGCCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085050.4 |
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| CDS GCA 72 bp | GTCTGCTGTGAAGGCCTCAGCCTGGTACAGAGCCCTTaGCTTCTCCTGGAATTCTGCCAGAATCTGCAGGTG | + |
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Preference number: 6 (lower is better) Translates to: VCCEGLSLVQSP*LLLEFCQNLQV Trigger: CACCTGCAGATTCTGGCAGAATTCCAGGAGAAGGCAAGGGCTCTGTACCAGGCTGAGGCCTTCACAGCAGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085050.4 |
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| CDS GCA 72 bp | TTCCTCAGGGTCTCTGGTTGCAAGCTGGCTTCTACCTaGTGCATCCTGCCCTGGTCAGGGAGAATGAACAGG | + |
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Preference number: 6 (lower is better) Translates to: FLRVSGCKLAST*CILPWSGRMNR Trigger: CCTGTTCATTCTCCCTGACCAGGGCAGGATGCAGCAGGTAGAAGCCAGCTTGCAACCAGAGACCCTGAGGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085050.4 |
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| CDS CAA 72 bp | CCTCAGAGAGTTCTTCCACTTCCTCAGGGTCTCTGGTaGCAAGCTGGCTTCTACCTGCTGCATCCTGCCCTG | + |
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Preference number: 6 (lower is better) Translates to: PQRVLPLPQGLW*QAGFYLLHPAL Trigger: CAGGGCAGGATGCAGCAGGTAGAAGCCAGCTTGCAACCAGAGACCCTGAGGAAGTGGAAGAACTCTCTGAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085050.4 |
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| CDS GCA 72 bp | TCAACAAACAGGGCACTGCCTGTGCTGATCTGTACCTaGTCCCCTGGATGGCTGAGCCTCTGTAGGAGATGT | + |
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Preference number: 6 (lower is better) Translates to: STNRALPVLICT*SPGWLSLCRRC Trigger: ACATCTCCTACAGAGGCTCAGCCATCCAGGGGAGCAGGTACAGATCAGCACAGGCAGTGCCCTGTTTGTTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085050.4 |
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| CDS CCA 72 bp | GGATGGCTGAGCCTCTGTAGGAGATGTCCAAAGCCCTaGTGGATGTCTGCTTCAGGGGTCTCTGTGAGATTG | + |
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Preference number: 6 (lower is better) Translates to: GWLSLCRRCPKP*WMSASGVSVRL Trigger: CAATCTCACAGAGACCCCTGAAGCAGACATCCACCAGGGCTTTGGACATCTCCTACAGAGGCTCAGCCATCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085050.4 |
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| CDS GCA 72 bp | AGCCTGGTACAGAGCCCTTGCCTTCTCCTGGAATTCTaGCAGAATCTGCAGGTGCTTTTCAACAAACAGGGC | + |
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Preference number: 6 (lower is better) Translates to: SLVQSPCLLLEF*QNLQVLFNKQG Trigger: GCCCTGTTTGTTGAAAAGCACCTGCAGATTCTGGCAGAATTCCAGGAGAAGGCAAGGGCTCTGTACCAGGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085050.4 |
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| CDS GCA 72 bp | CTTGCCTTCTCCTGGAATTCTGCCAGAATCTGCAGGTaGTTTTCAACAAACAGGGCACTGCCTGTGCTGATC | + |
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Preference number: 6 (lower is better) Translates to: LAFSWNSARICR*FSTNRALPVLI Trigger: GATCAGCACAGGCAGTGCCCTGTTTGTTGAAAAGCACCTGCAGATTCTGGCAGAATTCCAGGAGAAGGCAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085050.4 |
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| CDS TCA 72 bp | ATTCACCAGCACCATCAGTGTATCCGTATCCAGGTCTaGGATGAGTCCCTTGATCTTCCTCTGGGTCTGATT | + |
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Preference number: 6 (lower is better) Translates to: IHQHHQCIRIQV*DESLDLPLGLI Trigger: AATCAGACCCAGAGGAAGATCAAGGGACTCATCTCAGACCTGGATACGGATACACTGATGGTGCTGGTGAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085050.4 |
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| CDS TCA 72 bp | GGACCATCTGAGACACTATCAGGTCCTTGGTTCCTGTaGTCCCAGATAGGTCAGCTTGTTTGGAGAAGATTT | + |
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Preference number: 6 (lower is better) Translates to: GPSETLSGPWFL*SQIGQLVWRRF Trigger: AAATCTTCTCCAAACAAGCTGACCTATCTGGGATCACAGGAACCAAGGACCTGATAGTGTCTCAGATGGTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085050.4 |
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| CDS CAA 72 bp | TCCTTGGTTCCTGTGATCCCAGATAGGTCAGCTTGTTaGGAGAAGATTTCTTTAATGCCCAGCTCTGGAAGG | + |
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Preference number: 6 (lower is better) Translates to: SLVPVIPDRSAC*EKISLMPSSGR Trigger: CCTTCCAGAGCTGGGCATTAAAGAAATCTTCTCCAAACAAGCTGACCTATCTGGGATCACAGGAACCAAGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085050.4 |
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| CDS CAA 90 bp | ACTATCAGGTCCTTGGTTCCTGTGATCCCAGATAGGTCAGCTTGTTaGGAGAAGATTTCTTTAATGCCCAGCTCTGGAAGGATGTTCTTC | + |
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Preference number: 6 (lower is better) Translates to: TIRSLVPVIPDRSAC*EKISLMPSSGRMFF Trigger: GAAGAACATCCTTCCAGAGCTGGGCATTAAAGAAATCTTCTCCAAACAAGCTGACCTATCTGGGATCACAGGAACCAAGGACCTGATAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085050.4 |
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| CDS CCA 72 bp | AGCTTGTTTGGAGAAGATTTCTTTAATGCCCAGCTCTaGAAGGATGTTCTTCAGGCTGTAGTCAGTAGAGAT | + |
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Preference number: 6 (lower is better) Translates to: SLFGEDFFNAQL*KDVLQAVVSRD Trigger: ATCTCTACTGACTACAGCCTGAAGAACATCCTTCCAGAGCTGGGCATTAAAGAAATCTTCTCCAAACAAGCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085050.4 |
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