Pregenerated sensors for SERPINA3B (Mus musculus)
Ensembl gene IDs: ENSMUSG00000066364Ensembl transcript IDs: ENSMUST00000085052.3
Found 93 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CCCTGCAAGGGTCAGTGGGTGGTACAGACGATAGTAAGGAAAGAGTaGGGCAGAAACTGGGCACCAAGTGTTTCAGATGCTACAAATAGA | + |
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Preference number: 1 (lower is better) Translates to: PCKGQWVVQTIVRKE*GRNWAPSVSDATNR Trigger: TCTATTTGTAGCATCTGAAACACTTGGTGCCCAGTTTCTGCCTCACTCTTTCCTTACTATCGTCTGTACCACCCACTGACCCTTGCAGGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085052.3 |
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| 3UTR CCA 90 bp | GCAGAATGTTCCTGTCTTGTACCTTGTCCTGTTGTCCATATGGGTTaGCCTGTAAACTTTCATAGTTCCACCAAGGCTGCAGAAGTGGAA | + |
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Preference number: 1 (lower is better) Translates to: AECSCLVPCPVVHMG*PVNFHSSTKAAEVE Trigger: TTCCACTTCTGCAGCCTTGGTGGAACTATGAAAGTTTACAGGCCAACCCATATGGACAACAGGACAAGGTACAAGACAGGAACATTCTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085052.3 |
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| 3UTR-3UTR TCA 90 bp | GTGAGCAACAGACCACATGCAGCTATAGGAGAGGGGACTCCAACTGTGTGGACATCAGGCTCAGGAAGGTaGGCTCGTGTTGCCAAGAAG | + |
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Preference number: 2 (lower is better) Translates to: VSNRPHAAIGEGTPTVWTSGSGR*ARVAKK Trigger: CTTCTTGGCAACACGAGCTCACCTTCCTGAGCCTGA...TGTCCACACAGTTGGAGTCCCCTCTCCTATAGCTGCATGTGGTCTGTTGCTCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085052.3 |
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| 3UTR-3UTR TCA 90 bp | GTCCAGCTGTCCTGTGAGGCTGGTCATCTGGGAACTGAGAGAAAAGGTACTACTAGAAGACTAGGAGCTTaGCCCAGACCATCCACAGGC | + |
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Preference number: 2 (lower is better) Translates to: VQLSCEAGHLGTERKGTTRRLGA*PRPSTG Trigger: GCCTGTGGATGGTCTGGGTCAAGCTCCTAGTCTTCT...AGTAGTACCTTTTCTCTCAGTTCCCAGATGACCAGCCTCACAGGACAGCTGGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085052.3 |
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| 3UTR-3UTR TCA 90 bp | AGAGGAGCTGGTGTGAGCAACAGACCACATGCAGCTATAGGAGAGGGGACTCCAAGTGGAAAGCAGACATaGTCAGAGCATATCAGAGGA | + |
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Preference number: 2 (lower is better) Translates to: RGAGVSNRPHAAIGEGTPSGKQT*SEHIRG Trigger: TCCTCTGATATGCTCTGATCATGTCTGCTTTCCACT...TGGAGTCCCCTCTCCTATAGCTGCATGTGGTCTGTTGCTCACACCAGCTCCTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085052.3 |
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| 3UTR-3UTR CCA 90 bp | AGAGGAGCTGGTGTGAGCAACAGACCACATGCAGCTATAGGAGAGGGGACTCCACTCAATCTGTTAGCTTaGAAAGAAGCCCCACAACTC | + |
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Preference number: 2 (lower is better) Translates to: RGAGVSNRPHAAIGEGTPLNLLA*KEAPQL Trigger: GAGTTGTGGGGCTTCTTTCCAAGCTAACAGATTGAG...TGGAGTCCCCTCTCCTATAGCTGCATGTGGTCTGTTGCTCACACCAGCTCCTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085052.3 |
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| 3UTR-3UTR TCA 90 bp | GGGTCAGTGGGTGGTACAGACGATAGTAAGGAAAGAGTGAGGCAGAAACTGGGCGTCAAGGGCACTGTTTaGTTACAAAAATGCCACAGC | + |
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Preference number: 2 (lower is better) Translates to: GSVGGTDDSKERVRQKLGVKGTV*LQKCHS Trigger: GCTGTGGCATTTTTGTAATCAAACAGTGCCCTTGAC...GCCCAGTTTCTGCCTCACTCTTTCCTTACTATCGTCTGTACCACCCACTGACCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000085052.3 |
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| 3UTR-3UTR TCA 90 bp | AACTGGGCACCAAGTGTTTCAGATGCTACAAATAGACAGGGCAGAATGTTCCTGGAGCAGAGGAAAGGCTaGGTTCAGGCTCAGGAAGGT | + |
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Preference number: 2 (lower is better) Translates to: NWAPSVSDATNRQGRMFLEQRKG*VQAQEG Trigger: ACCTTCCTGAGCCTGAACTCAGCCTTTCCTCTGCTC...CAGGAACATTCTGCCCTGTCTATTTGTAGCATCTGAAACACTTGGTGCCCAGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085052.3 |
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| 3UTR-3UTR TCA 90 bp | AGAGGAGCTGGTGTGAGCAACAGACCACATGCAGCTATAGGAGAGGGGACTCCAATCCACAGGCTCATGTaGAATGTGACTAGTAAAGTT | + |
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Preference number: 2 (lower is better) Translates to: RGAGVSNRPHAAIGEGTPIHRLM*NVTSKV Trigger: AACTTTACTAGTCACATTTCACATGAGCCTGTGGAT...TGGAGTCCCCTCTCCTATAGCTGCATGTGGTCTGTTGCTCACACCAGCTCCTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085052.3 |
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| 3UTR-3UTR TCA 90 bp | GGGTCAGTGGGTGGTACAGACGATAGTAAGGAAAGAGTGAGGCAGAAACTGGGCGGCTCATGTGAAATGTaGCTAGTAAAGTTAGTCAAG | + |
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Preference number: 2 (lower is better) Translates to: GSVGGTDDSKERVRQKLGGSCEM*LVKLVK Trigger: CTTGACTAACTTTACTAGTCACATTTCACATGAGCC...GCCCAGTTTCTGCCTCACTCTTTCCTTACTATCGTCTGTACCACCCACTGACCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085052.3 |
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| 3UTR-3UTR GCA 90 bp | TTGATCATTTGCTCCTCCCTTTCATTTTGGGTGATGGAGGTGGAGGTGTCCAGCGTGGAAGCTGAAAATTaGATAAAGACTCAATCTGTT | + |
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Preference number: 2 (lower is better) Translates to: LIICSSLSFWVMEVEVSSVEAEN*IKTQSV Trigger: AACAGATTGAGTCTTTATGCAATTTTCAGCTTCCAC...GCTGGACACCTCCACCTCCATCACCCAAAATGAAAGGGAGGAGCAAATGATCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085052.3 |
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| 3UTR CCA 72 bp | CCACATGCAGCTATAGGAGAGGGGACTCCAACTGTGTaGACAGAGTCAGGAGACCCTGCAAGGGTCAGTGGG | + |
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Preference number: 3 (lower is better) Translates to: PHAAIGEGTPTV*TESGDPARVSG Trigger: CCCACTGACCCTTGCAGGGTCTCCTGACTCTGTCCACACAGTTGGAGTCCCCTCTCCTATAGCTGCATGTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085052.3 |
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| 3UTR TCA 72 bp | GGAGCAGAGGAAAGGCTGAGTTCAGGCTCAGGAAGGTaGGCTCGTGTTGCCAAGAAGACTAGGAGCTTGACC | + |
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Preference number: 3 (lower is better) Translates to: GAEERLSSGSGR*ARVAKKTRSLT Trigger: GGTCAAGCTCCTAGTCTTCTTGGCAACACGAGCTCACCTTCCTGAGCCTGAACTCAGCCTTTCCTCTGCTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085052.3 |
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| 3UTR CCA 72 bp | GTGGAGGTGTCCAGCTGTCCTGTGAGGCTGGTCATCTaGGAACTGAGAGAAAAGGTACTACTCTGCCCTGAG | + |
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Preference number: 3 (lower is better) Translates to: VEVSSCPVRLVI*ELREKVLLCPE Trigger: CTCAGGGCAGAGTAGTACCTTTTCTCTCAGTTCCCAGATGACCAGCCTCACAGGACAGCTGGACACCTCCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085052.3 |
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| 3UTR-3UTR CAA 90 bp | GGGCACCAAGTGTTTCAGATGCTACAAATAGACAGGGCAGAATGTTCCTGTCTTGAAGGTGAGCTCGTGTaGCCAAGAAGACTAGGAGCT | + |
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Preference number: 3 (lower is better) Translates to: GHQVFQMLQIDRAECSCLEGELV*PRRLGA Trigger: AGCTCCTAGTCTTCTTGGCAACACGAGCTCACCTTC...AAGACAGGAACATTCTGCCCTGTCTATTTGTAGCATCTGAAACACTTGGTGCCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085052.3 |
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| 3UTR CCA 72 bp | TCCTGTCTTGTACCTTGTCCTGTTGTCCATATGGGTTaGCCTGTAAACTTTCATAGTTCCACCAAGGCTGCA | + |
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Preference number: 3 (lower is better) Translates to: SCLVPCPVVHMG*PVNFHSSTKAA Trigger: TGCAGCCTTGGTGGAACTATGAAAGTTTACAGGCCAACCCATATGGACAACAGGACAAGGTACAAGACAGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085052.3 |
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| 3UTR-3UTR CAA 90 bp | GGGCACCAAGTGTTTCAGATGCTACAAATAGACAGGGCAGAATGTTCCTGTCTTAGTCAAGGGCACTGTTaGATTACAAAAATGCCACAG | + |
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Preference number: 3 (lower is better) Translates to: GHQVFQMLQIDRAECSCLSQGHC*ITKMPQ Trigger: CTGTGGCATTTTTGTAATCAAACAGTGCCCTTGACT...AAGACAGGAACATTCTGCCCTGTCTATTTGTAGCATCTGAAACACTTGGTGCCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000085052.3 |
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| CDS-3UTR TCA 90 bp | ATGGAGGTGGAGGTGTCCAGCTGTCCTGTGAGGCTGGTCATCTGGGAACTGAGAGCTGGAAGTTGGCTGTaGAGACCTCAGTGTGGTACA | + |
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Preference number: 4 (lower is better) Translates to: MEVEVSSCPVRLVIWELRAGSWL*RPQCGT Trigger: TGTACCACACTGAGGTCTTCACAGCCAACTTCCAGC...TCTCAGTTCCCAGATGACCAGCCTCACAGGACAGCTGGACACCTCCACCTCCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085052.3 |
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| CDS-3UTR GCA 90 bp | ATGGAGGTGGAGGTGTCCAGCTGTCCTGTGAGGCTGGTCATCTGGGAACTGAGAGCCCTGGTGGATGTCTaGCTCAGATGTTTCTGTCAG | + |
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Preference number: 4 (lower is better) Translates to: MEVEVSSCPVRLVIWELRALVDV*LRCFCQ Trigger: CTGACAGAAACATCTGAGGCAGACATCCACCAGGGC...TCTCAGTTCCCAGATGACCAGCCTCACAGGACAGCTGGACACCTCCACCTCCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085052.3 |
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| CDS-3UTR GCA 90 bp | AGAGGAGCTGGTGTGAGCAACAGACCACATGCAGCTATAGGAGAGGGGACTCCAAAGCTGGCTTCCACCTaGTGCATCTTGCCCTGGTCA | + |
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Preference number: 4 (lower is better) Translates to: RGAGVSNRPHAAIGEGTPKLAST*CILPWS Trigger: TGACCAGGGCAAGATGCAGCAGGTGGAAGCCAGCTT...TGGAGTCCCCTCTCCTATAGCTGCATGTGGTCTGTTGCTCACACCAGCTCCTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085052.3 |
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| CDS-3UTR TCA 90 bp | GTGAGCAACAGACCACATGCAGCTATAGGAGAGGGGACTCCAACTGTGTGGACACATCTGAGCAGCAGATaGCAGCAGGGCAGATCTCAG | + |
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Preference number: 4 (lower is better) Translates to: VSNRPHAAIGEGTPTVWTHLSSR*QQGRSQ Trigger: CTGAGATCTGCCCTGCTGTCATCTGCTGCTCAGATG...TGTCCACACAGTTGGAGTCCCCTCTCCTATAGCTGCATGTGGTCTGTTGCTCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085052.3 |
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| CDS-3UTR CCA 90 bp | AGAGGAGCTGGTGTGAGCAACAGACCACATGCAGCTATAGGAGAGGGGACTCCATGCTGCATCTTGCCCTaGTCAGGGAGGATGAACATG | + |
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Preference number: 4 (lower is better) Translates to: RGAGVSNRPHAAIGEGTPCCILP*SGRMNM Trigger: CATGTTCATCCTCCCTGACCAGGGCAAGATGCAGCA...TGGAGTCCCCTCTCCTATAGCTGCATGTGGTCTGTTGCTCACACCAGCTCCTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085052.3 |
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| CDS-3UTR GCA 90 bp | ATGGAGGTGGAGGTGTCCAGCTGTCCTGTGAGGCTGGTCATCTGGGAACTGAGATCATGTCCAGCTCAGTaGTGTGGATCATCTCAGAGA | + |
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Preference number: 4 (lower is better) Translates to: MEVEVSSCPVRLVIWELRSCPAQ*CGSSQR Trigger: TCTCTGAGATGATCCACAGCACTGAGCTGGACATGA...TCTCAGTTCCCAGATGACCAGCCTCACAGGACAGCTGGACACCTCCACCTCCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085052.3 |
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| CDS-3UTR TCA 90 bp | GGGTCAGTGGGTGGTACAGACGATAGTAAGGAAAGAGTGAGGCAGAAACTGGGCCTGTCCAGTTGTTTTTaGGTGTCCTGGCCTTTCTGG | + |
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Preference number: 4 (lower is better) Translates to: GSVGGTDDSKERVRQKLGLSSCF*VSWPFW Trigger: CCAGAAAGGCCAGGACACTCAAAAACAACTGGACAG...GCCCAGTTTCTGCCTCACTCTTTCCTTACTATCGTCTGTACCACCCACTGACCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000085052.3 |
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| CDS-3UTR TCA 90 bp | ATGGAGGTGGAGGTGTCCAGCTGTCCTGTGAGGCTGGTCATCTGGGAACTGAGAAGGCAAAGTCAGTGTTaGTGGAAGCCAGTGTTAAAC | + |
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Preference number: 4 (lower is better) Translates to: MEVEVSSCPVRLVIWELRRQSQC*WKPVLN Trigger: GTTTAACACTGGCTTCCATCAACACTGACTTTGCCT...TCTCAGTTCCCAGATGACCAGCCTCACAGGACAGCTGGACACCTCCACCTCCAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085052.3 |
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| CDS-3UTR TCA 90 bp | GAGAAAAGGTACTACTCTGCCCTGAGTAGGAGTGTTAGGGGGAGAGGAGCTGGTTGTTCTTCACTCCTGTaGTGCCAGAAAGGTCAGCCT | + |
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Preference number: 4 (lower is better) Translates to: EKRYYSALSRSVRGRGAGCSSLL*CQKGQP Trigger: AGGCTGACCTTTCTGGCATCACAGGAGTGAAGAACA...ACCAGCTCCTCTCCCCCTAACACTCCTACTCAGGGCAGAGTAGTACCTTTTCTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000085052.3 |
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| CDS-3UTR GCA 90 bp | GTGAGCAACAGACCACATGCAGCTATAGGAGAGGGGACTCCAACTGTGTGGACATCAGAGCAGTTGCGATaGCAAAGGGAGAGAAGGCAA | + |
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Preference number: 4 (lower is better) Translates to: VSNRPHAAIGEGTPTVWTSEQLR*QRERRQ Trigger: TTGCCTTCTCTCCCTTTGGCATCGCAACTGCTCTGA...TGTCCACACAGTTGGAGTCCCCTCTCCTATAGCTGCATGTGGTCTGTTGCTCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085052.3 |
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| CDS-3UTR GCA 90 bp | GAGAAAAGGTACTACTCTGCCCTGAGTAGGAGTGTTAGGGGGAGAGGAGCTGGTTCAGCTCCACCACAGTaGATTTCAGCTCTTCATCCC | + |
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Preference number: 4 (lower is better) Translates to: EKRYYSALSRSVRGRGAGSAPPQ*ISALHP Trigger: GGGATGAAGAGCTGAAATGCACTGTGGTGGAGCTGA...ACCAGCTCCTCTCCCCCTAACACTCCTACTCAGGGCAGAGTAGTACCTTTTCTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000085052.3 |
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| CDS-3UTR CCA 90 bp | GGGTCAGTGGGTGGTACAGACGATAGTAAGGAAAGAGTGAGGCAGAAACTGGGCTGCTTAAAGCCCTGGTaGATGTCTGCCTCAGATGTT | + |
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Preference number: 4 (lower is better) Translates to: GSVGGTDDSKERVRQKLGCLKPW*MSASDV Trigger: AACATCTGAGGCAGACATCCACCAGGGCTTTAAGCA...GCCCAGTTTCTGCCTCACTCTTTCCTTACTATCGTCTGTACCACCCACTGACCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085052.3 |
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| CDS-3UTR GCA 90 bp | GTGAGCAACAGACCACATGCAGCTATAGGAGAGGGGACTCCAACTGTGTGGACATTCTGGACTGCATTGTaGATTCCTAGTGTGCCATCT | + |
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Preference number: 4 (lower is better) Translates to: VSNRPHAAIGEGTPTVWTFWTAL*IPSVPS Trigger: AGATGGCACACTAGGAATGCACAATGCAGTCCAGAA...TGTCCACACAGTTGGAGTCCCCTCTCCTATAGCTGCATGTGGTCTGTTGCTCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085052.3 |
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| CDS-3UTR CCA 90 bp | GTCCAGCTGTCCTGTGAGGCTGGTCATCTGGGAACTGAGAGAAAAGGTACTACTTCCAGCTCAGTGCTGTaGATCATCTCAGAGACTGTT | + |
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Preference number: 4 (lower is better) Translates to: VQLSCEAGHLGTERKGTTSSSVL*IISETV Trigger: AACAGTCTCTGAGATGATCCACAGCACTGAGCTGGA...AGTAGTACCTTTTCTCTCAGTTCCCAGATGACCAGCCTCACAGGACAGCTGGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085052.3 |
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| CDS-3UTR GCA 90 bp | GTCCAGCTGTCCTGTGAGGCTGGTCATCTGGGAACTGAGAGAAAAGGTACTACTTTGCATCTCCTTCTGTaGCTTTCTCAGTCATGTCCA | + |
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Preference number: 4 (lower is better) Translates to: VQLSCEAGHLGTERKGTTLHLLL*LSQSCP Trigger: TGGACATGACTGAGAAAGGCACAGAAGGAGATGCAA...AGTAGTACCTTTTCTCTCAGTTCCCAGATGACCAGCCTCACAGGACAGCTGGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085052.3 |
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| CDS-3UTR GCA 90 bp | TGTTCCTGTCTTGTACCTTGTCCTGTTGTCCATATGGGTTGGCCTGTAAACTTTAGCCTCTGTAGGAGGTaGTTAAAGCCCTGGTGGATG | + |
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Preference number: 4 (lower is better) Translates to: CSCLVPCPVVHMGWPVNFSLCRR*LKPWWM Trigger: CATCCACCAGGGCTTTAAGCACCTCCTACAGAGGCT...AAAGTTTACAGGCCAACCCATATGGACAACAGGACAAGGTACAAGACAGGAACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085052.3 |
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| CDS-3UTR CCA 90 bp | TGTTCCTGTCTTGTACCTTGTCCTGTTGTCCATATGGGTTGGCCTGTAAACTTTAGGTGCTTAAAGCCCTaGTGGATGTCTGCCTCAGAT | + |
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Preference number: 4 (lower is better) Translates to: CSCLVPCPVVHMGWPVNFRCLKP*WMSASD Trigger: ATCTGAGGCAGACATCCACCAGGGCTTTAAGCACCT...AAAGTTTACAGGCCAACCCATATGGACAACAGGACAAGGTACAAGACAGGAACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085052.3 |
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| CDS-3UTR TCA 90 bp | TGTCTTGTACCTTGTCCTGTTGTCCATATGGGTTGGCCTGTAAACTTTCATAGTAGCTTCATAGCTTCATaGGGCTGCTGGAAGTTGGCT | + |
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Preference number: 4 (lower is better) Translates to: CLVPCPVVHMGWPVNFHSSFIAS*GCWKLA Trigger: AGCCAACTTCCAGCAGCCTCATGAAGCTATGAAGCT...ACTATGAAAGTTTACAGGCCAACCCATATGGACAACAGGACAAGGTACAAGACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085052.3 |
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| CDS-3UTR GCA 90 bp | AACTGGGCACCAAGTGTTTCAGATGCTACAAATAGACAGGGCAGAATGTTCCTGAACTCTGCCAGGATCTaGAGGTGCTTTTCAACAAAC | + |
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Preference number: 4 (lower is better) Translates to: NWAPSVSDATNRQGRMFLNSARI*RCFSTN Trigger: GTTTGTTGAAAAGCACCTGCAGATCCTGGCAGAGTT...CAGGAACATTCTGCCCTGTCTATTTGTAGCATCTGAAACACTTGGTGCCCAGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085052.3 |
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| CDS-3UTR TCA 90 bp | AGTAAAGTTAGTCAAGGGCACTGTTTGATTACAAAAATGCCACAGCCTATGAGATGGAGAAGAGTTCCCTaGTACCCAGCTCTGGAAGGA | + |
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Preference number: 4 (lower is better) Translates to: SKVSQGHCLITKMPQPMRWRRVP*YPALEG Trigger: TCCTTCCAGAGCTGGGTATCAGGGAACTCTTCTCCA...TCTCATAGGCTGTGGCATTTTTGTAATCAAACAGTGCCCTTGACTAACTTTACT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000085052.3 |
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| CDS-3UTR TCA 90 bp | TTGATCATTTGCTCCTCCCTTTCATTTTGGGTGATGGAGGTGGAGGTGTCCAGCATCCACAAATCACCTTaGTCTAAAACAATGTACAGG | + |
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Preference number: 4 (lower is better) Translates to: LIICSSLSFWVMEVEVSSIHKSP*SKTMYR Trigger: CCTGTACATTGTTTTAGATCAAGGTGATTTGTGGAT...GCTGGACACCTCCACCTCCATCACCCAAAATGAAAGGGAGGAGCAAATGATCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085052.3 |
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| CDS-3UTR GCA 90 bp | AGTAAAGTTAGTCAAGGGCACTGTTTGATTACAAAAATGCCACAGCCTATGAGAGTGGTACAGAGCCCTTaGCTTCTCCTTGAACTCTGC | + |
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Preference number: 4 (lower is better) Translates to: SKVSQGHCLITKMPQPMRVVQSP*LLLELC Trigger: GCAGAGTTCAAGGAGAAGGCAAGGGCTCTGTACCAC...TCTCATAGGCTGTGGCATTTTTGTAATCAAACAGTGCCCTTGACTAACTTTACT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000085052.3 |
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| CDS-3UTR CCA 90 bp | TGTCTTGTACCTTGTCCTGTTGTCCATATGGGTTGGCCTGTAAACTTTCATAGTGAGAACTTGGGTAAGTaGAGCTCTTTTATCTTCCTG | + |
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Preference number: 4 (lower is better) Translates to: CLVPCPVVHMGWPVNFHSENLGK*SSFIFL Trigger: CAGGAAGATAAAAGAGCTCCACTTACCCAAGTTCTC...ACTATGAAAGTTTACAGGCCAACCCATATGGACAACAGGACAAGGTACAAGACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085052.3 |
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| CDS-3UTR TCA 90 bp | AGTAAAGTTAGTCAAGGGCACTGTTTGATTACAAAAATGCCACAGCCTATGAGAATTGCCATCCATGTCTaGGACCAGTTCCTTGATCTT | + |
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Preference number: 4 (lower is better) Translates to: SKVSQGHCLITKMPQPMRIAIHV*DQFLDL Trigger: AAGATCAAGGAACTGGTCTCAGACATGGATGGCAAT...TCTCATAGGCTGTGGCATTTTTGTAATCAAACAGTGCCCTTGACTAACTTTACT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000085052.3 |
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| CDS-3UTR CCA 90 bp | AGTAAAGTTAGTCAAGGGCACTGTTTGATTACAAAAATGCCACAGCCTATGAGACTTAGTTTTCATCATTaGCACTTTCACATGCCTACT | + |
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Preference number: 4 (lower is better) Translates to: SKVSQGHCLITKMPQPMRLSFHH*HFHMPT Trigger: AGTAGGCATGTGAAAGTGCCAATGATGAAAACTAAG...TCTCATAGGCTGTGGCATTTTTGTAATCAAACAGTGCCCTTGACTAACTTTACT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000085052.3 |
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| CDS CCA 90 bp | ACAAACAGGGCATTGCCTGTCCTGATCTGTACCTGGTCCCCTGGATaGCTGAGCCTCTGTAGGAGGTGCTTAAAGCCCTGGTGGATGTCT | + |
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Preference number: 5 (lower is better) Translates to: TNRALPVLICTWSPG*LSLCRRCLKPWWMS Trigger: AGACATCCACCAGGGCTTTAAGCACCTCCTACAGAGGCTCAGCCATCCAGGGGACCAGGTACAGATCAGGACAGGCAATGCCCTGTTTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085052.3 |
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| CDS CCA 90 bp | AGGTGCTTTTCAACAAACAGGGCATTGCCTGTCCTGATCTGTACCTaGTCCCCTGGATGGCTGAGCCTCTGTAGGAGGTGCTTAAAGCCC | + |
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Preference number: 5 (lower is better) Translates to: RCFSTNRALPVLICT*SPGWLSLCRRCLKP Trigger: GGGCTTTAAGCACCTCCTACAGAGGCTCAGCCATCCAGGGGACCAGGTACAGATCAGGACAGGCAATGCCCTGTTTGTTGAAAAGCACCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085052.3 |
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| CDS-3UTR CAA 90 bp | AGAGGAGCTGGTGTGAGCAACAGACCACATGCAGCTATAGGAGAGGGGACTCCAATCTCTTCCAAGGTGTaGCCCTTTGCTCCCAGAGTC | + |
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Preference number: 5 (lower is better) Translates to: RGAGVSNRPHAAIGEGTPISSKV*PFAPRV Trigger: GACTCTGGGAGCAAAGGGCAACACCTTGGAAGAGAT...TGGAGTCCCCTCTCCTATAGCTGCATGTGGTCTGTTGCTCACACCAGCTCCTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085052.3 |
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| CDS TCA 90 bp | TCTGGACTGCATTGTGCATTCCTAGTGTGCCATCTGAGCAGCAGATaGCAGCAGGGCAGATCTCAGCCATTAAGAGCCCTAGAGCTGCAA | + |
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Preference number: 5 (lower is better) Translates to: SGLHCAFLVCHLSSR*QQGRSQPLRALELQ Trigger: TTGCAGCTCTAGGGCTCTTAATGGCTGAGATCTGCCCTGCTGTCATCTGCTGCTCAGATGGCACACTAGGAATGCACAATGCAGTCCAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085052.3 |
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| CDS GCA 90 bp | TACAGAGCCCTTGCCTTCTCCTTGAACTCTGCCAGGATCTGCAGGTaGTTTTCAACAAACAGGGCATTGCCTGTCCTGATCTGTACCTGG | + |
|
Preference number: 5 (lower is better) Translates to: YRALAFSLNSARICR*FSTNRALPVLICTW Trigger: CCAGGTACAGATCAGGACAGGCAATGCCCTGTTTGTTGAAAAGCACCTGCAGATCCTGGCAGAGTTCAAGGAGAAGGCAAGGGCTCTGTA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085052.3 |
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| CDS GCA 90 bp | GTGTGGTACAGAGCCCTTGCCTTCTCCTTGAACTCTGCCAGGATCTaGAGGTGCTTTTCAACAAACAGGGCATTGCCTGTCCTGATCTGT | + |
|
Preference number: 5 (lower is better) Translates to: VWYRALAFSLNSARI*RCFSTNRALPVLIC Trigger: ACAGATCAGGACAGGCAATGCCCTGTTTGTTGAAAAGCACCTGCAGATCCTGGCAGAGTTCAAGGAGAAGGCAAGGGCTCTGTACCACAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085052.3 |
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| CDS GCA 90 bp | GAAGACCTCAGTGTGGTACAGAGCCCTTGCCTTCTCCTTGAACTCTaGCAGGATCTGCAGGTGCTTTTCAACAAACAGGGCATTGCCTGT | + |
|
Preference number: 5 (lower is better) Translates to: EDLSVVQSPCLLLEL*QDLQVLFNKQGIAC Trigger: ACAGGCAATGCCCTGTTTGTTGAAAAGCACCTGCAGATCCTGGCAGAGTTCAAGGAGAAGGCAAGGGCTCTGTACCACACTGAGGTCTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085052.3 |
||
| CDS-3UTR CAA 90 bp | GTGAGCAACAGACCACATGCAGCTATAGGAGAGGGGACTCCAACTGTGTGGACAGAGGGGTTGATAACCTaGCCCATTACATGGATCCAC | + |
|
Preference number: 5 (lower is better) Translates to: VSNRPHAAIGEGTPTVWTEGLIT*PITWIH Trigger: GTGGATCCATGTAATGGGCAAGGTTATCAACCCCTC...TGTCCACACAGTTGGAGTCCCCTCTCCTATAGCTGCATGTGGTCTGTTGCTCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085052.3 |
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| CDS-3UTR CAA 90 bp | ATGGAGGTGGAGGTGTCCAGCTGTCCTGTGAGGCTGGTCATCTGGGAACTGAGAAAGGCAAAGTCAGTGTaGATGGAAGCCAGTGTTAAA | + |
|
Preference number: 5 (lower is better) Translates to: MEVEVSSCPVRLVIWELRKAKSV*MEASVK Trigger: TTTAACACTGGCTTCCATCAACACTGACTTTGCCTT...TCTCAGTTCCCAGATGACCAGCCTCACAGGACAGCTGGACACCTCCACCTCCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085052.3 |
||
| CDS-3UTR CAA 90 bp | GGGCACCAAGTGTTTCAGATGCTACAAATAGACAGGGCAGAATGTTCCTGTCTTCCAAGGTGTTGCCCTTaGCTCCCAGAGTCAAGGAGT | + |
|
Preference number: 5 (lower is better) Translates to: GHQVFQMLQIDRAECSCLPRCCP*LPESRS Trigger: ACTCCTTGACTCTGGGAGCAAAGGGCAACACCTTGG...AAGACAGGAACATTCTGCCCTGTCTATTTGTAGCATCTGAAACACTTGGTGCCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085052.3 |
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| CDS CCA 90 bp | GCATCTCCTTCTGTGCCTTTCTCAGTCATGTCCAGCTCAGTGCTGTaGATCATCTCAGAGACTGTTATGTTCTTCACTCCTGTGATGCCA | + |
|
Preference number: 5 (lower is better) Translates to: ASPSVPFSVMSSSVL*IISETVMFFTPVMP Trigger: TGGCATCACAGGAGTGAAGAACATAACAGTCTCTGAGATGATCCACAGCACTGAGCTGGACATGACTGAGAAAGGCACAGAAGGAGATGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085052.3 |
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| CDS CCA 90 bp | GTTGGGATAAGGAGAACTTGGGTAAGTGGAGCTCTTTTATCTTCCTaGGCCTCAAAGATTTCCTCCACTTCTTCAGGGTCCCTGGTTGTA | + |
|
Preference number: 5 (lower is better) Translates to: VGIRRTWVSGALLSS*ASKISSTSSGSLVV Trigger: TACAACCAGGGACCCTGAAGAAGTGGAGGAAATCTTTGAGGCCCAGGAAGATAAAAGAGCTCCACTTACCCAAGTTCTCCTTATCCCAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085052.3 |
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| CDS GCA 90 bp | CAAGGTGTTGCCCTTTGCTCCCAGAGTCAAGGAGTTCAGAGCAGTTaGGATGCCAAAGGGAGAGAAGGCAATATTTTTATGTGGATTCTT | + |
|
Preference number: 5 (lower is better) Translates to: QGVALCSQSQGVQSS*DAKGREGNIFMWIL Trigger: AAGAATCCACATAAAAATATTGCCTTCTCTCCCTTTGGCATCGCAACTGCTCTGAACTCCTTGACTCTGGGAGCAAAGGGCAACACCTTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000085052.3 |
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| CDS-3UTR CAA 90 bp | AGTAAAGTTAGTCAAGGGCACTGTTTGATTACAAAAATGCCACAGCCTATGAGAGCCCTTGCCTTCTCCTaGAACTCTGCCAGGATCTGC | + |
|
Preference number: 5 (lower is better) Translates to: SKVSQGHCLITKMPQPMRALAFS*NSARIC Trigger: GCAGATCCTGGCAGAGTTCAAGGAGAAGGCAAGGGC...TCTCATAGGCTGTGGCATTTTTGTAATCAAACAGTGCCCTTGACTAACTTTACT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000085052.3 |
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| CDS GCA 90 bp | TGTTGCCCTTTGCTCCCAGAGTCAAGGAGTTCAGAGCAGTTGCGATaGCAAAGGGAGAGAAGGCAATATTTTTATGTGGATTCTTCAAAG | + |
|
Preference number: 5 (lower is better) Translates to: CCPLLPESRSSEQLR*QRERRQYFYVDSSK Trigger: CTTTGAAGAATCCACATAAAAATATTGCCTTCTCTCCCTTTGGCATCGCAACTGCTCTGAACTCCTTGACTCTGGGAGCAAAGGGCAACA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000085052.3 |
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| CDS CCA 90 bp | CTGGAAGGATGTCTTCTAGGTTGTAGTGTTGGGATAAGGAGAACTTaGGTAAGTGGAGCTCTTTTATCTTCCTGGGCCTCAAAGATTTCC | + |
|
Preference number: 5 (lower is better) Translates to: LEGCLLGCSVGIRRT*VSGALLSSWASKIS Trigger: GGAAATCTTTGAGGCCCAGGAAGATAAAAGAGCTCCACTTACCCAAGTTCTCCTTATCCCAACACTACAACCTAGAAGACATCCTTCCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085052.3 |
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| CDS-3UTR CAA 90 bp | CATATGGGTTGGCCTGTAAACTTTCATAGTTCCACCAAGGCTGCAGAAGTGGAATGGGATAAGGAGAACTaGGGTAAGTGGAGCTCTTTT | + |
|
Preference number: 5 (lower is better) Translates to: HMGWPVNFHSSTKAAEVEWDKEN*GKWSSF Trigger: AAAAGAGCTCCACTTACCCAAGTTCTCCTTATCCCA...TTCCACTTCTGCAGCCTTGGTGGAACTATGAAAGTTTACAGGCCAACCCATATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085052.3 |
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| CDS CCA 90 bp | TTCATCCCGGAAGTAGGGTGTCCTCAGGTTCTTAGTTTTCATCATTaGCACTTTCACATGCCTACTCCTGTCCACTATGAATTTTCCCAT | + |
|
Preference number: 5 (lower is better) Translates to: FIPEVGCPQVLSFHH*HFHMPTPVHYEFSH Trigger: ATGGGAAAATTCATAGTGGACAGGAGTAGGCATGTGAAAGTGCCAATGATGAAAACTAAGAACCTGAGGACACCCTACTTCCGGGATGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085052.3 |
||
| CDS-3UTR CAA 90 bp | GGGCACCAAGTGTTTCAGATGCTACAAATAGACAGGGCAGAATGTTCCTGTCTTTACTTTTCTGAGGGGTaGATAACCTTGCCCATTACA | + |
|
Preference number: 5 (lower is better) Translates to: GHQVFQMLQIDRAECSCLYFSEG*ITLPIT Trigger: TGTAATGGGCAAGGTTATCAACCCCTCAGAAAAGTA...AAGACAGGAACATTCTGCCCTGTCTATTTGTAGCATCTGAAACACTTGGTGCCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085052.3 |
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| CDS GCA 90 bp | AGGTTTAAGTTTTGCAGACATGAAGTTGTATCCGACTATTGTGATTaGATCTCCTTCTGTGCCTTTCTCAGTCATGTCCAGCTCAGTGCT | + |
|
Preference number: 5 (lower is better) Translates to: RFKFCRHEVVSDYCD*ISFCAFLSHVQLSA Trigger: AGCACTGAGCTGGACATGACTGAGAAAGGCACAGAAGGAGATGCAATCACAATAGTCGGATACAACTTCATGTCTGCAAAACTTAAACCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085052.3 |
||
| CDS-3UTR CAA 90 bp | AGTAAAGTTAGTCAAGGGCACTGTTTGATTACAAAAATGCCACAGCCTATGAGACCTTTCTGGACTGCATaGTGCATTCCTAGTGTGCCA | + |
|
Preference number: 5 (lower is better) Translates to: SKVSQGHCLITKMPQPMRPFWTA*CIPSVP Trigger: TGGCACACTAGGAATGCACAATGCAGTCCAGAAAGG...TCTCATAGGCTGTGGCATTTTTGTAATCAAACAGTGCCCTTGACTAACTTTACT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000085052.3 |
||
| CDS-3UTR CAA 90 bp | AGTAAAGTTAGTCAAGGGCACTGTTTGATTACAAAAATGCCACAGCCTATGAGATCAACAAACAGGGCATaGCCTGTCCTGATCTGTACC | + |
|
Preference number: 5 (lower is better) Translates to: SKVSQGHCLITKMPQPMRSTNRA*PVLICT Trigger: GGTACAGATCAGGACAGGCAATGCCCTGTTTGTTGA...TCTCATAGGCTGTGGCATTTTTGTAATCAAACAGTGCCCTTGACTAACTTTACT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000085052.3 |
||
| CDS-3UTR CAA 90 bp | AGTAAAGTTAGTCAAGGGCACTGTTTGATTACAAAAATGCCACAGCCTATGAGAACTGTCCAGTTGTTTTaGAGTGTCCTGGCCTTTCTG | + |
|
Preference number: 5 (lower is better) Translates to: SKVSQGHCLITKMPQPMRTVQLF*SVLAFL Trigger: CAGAAAGGCCAGGACACTCAAAAACAACTGGACAGT...TCTCATAGGCTGTGGCATTTTTGTAATCAAACAGTGCCCTTGACTAACTTTACT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000085052.3 |
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| CDS TCA 90 bp | GAGGGGTTGATAACCTTGCCCATTACATGGATCCACAAATCACCTTaGTCTAAAACAATGTACAGGAATTGGTCCTCAAATTTAACAAAC | + |
|
Preference number: 5 (lower is better) Translates to: EGLITLPITWIHKSP*SKTMYRNWSSNLTN Trigger: GTTTGTTAAATTTGAGGACCAATTCCTGTACATTGTTTTAGATCAAGGTGATTTGTGGATCCATGTAATGGGCAAGGTTATCAACCCCTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085052.3 |
||
| CDS GCA 90 bp | GTACAGGAATTGGTCCTCAAATTTAACAAACACAGGTTTAAGTTTTaGAGACATGAAGTTGTATCCGACTATTGTGATTGCATCTCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: VQELVLKFNKHRFKF*RHEVVSDYCDCISF Trigger: GAAGGAGATGCAATCACAATAGTCGGATACAACTTCATGTCTGCAAAACTTAAACCTGTGTTTGTTAAATTTGAGGACCAATTCCTGTAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085052.3 |
||
| CDS CCA 72 bp | GCATTGCCTGTCCTGATCTGTACCTGGTCCCCTGGATaGCTGAGCCTCTGTAGGAGGTGCTTAAAGCCCTGG | + |
|
Preference number: 6 (lower is better) Translates to: ALPVLICTWSPG*LSLCRRCLKPW Trigger: CCAGGGCTTTAAGCACCTCCTACAGAGGCTCAGCCATCCAGGGGACCAGGTACAGATCAGGACAGGCAATGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085052.3 |
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| CDS CCA 72 bp | TCAACAAACAGGGCATTGCCTGTCCTGATCTGTACCTaGTCCCCTGGATGGCTGAGCCTCTGTAGGAGGTGC | + |
|
Preference number: 6 (lower is better) Translates to: STNRALPVLICT*SPGWLSLCRRC Trigger: GCACCTCCTACAGAGGCTCAGCCATCCAGGGGACCAGGTACAGATCAGGACAGGCAATGCCCTGTTTGTTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085052.3 |
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| CDS GCA 72 bp | GTTGGCTGTGAAGACCTCAGTGTGGTACAGAGCCCTTaGCTTCTCCTTGAACTCTGCCAGGATCTGCAGGTG | + |
|
Preference number: 6 (lower is better) Translates to: VGCEDLSVVQSP*LLLELCQDLQV Trigger: CACCTGCAGATCCTGGCAGAGTTCAAGGAGAAGGCAAGGGCTCTGTACCACACTGAGGTCTTCACAGCCAAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085052.3 |
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| CDS CAA 72 bp | GCCAGGATCTGCAGGTGCTTTTCAACAAACAGGGCATaGCCTGTCCTGATCTGTACCTGGTCCCCTGGATGG | + |
|
Preference number: 6 (lower is better) Translates to: ARICRCFSTNRA*PVLICTWSPGW Trigger: CCATCCAGGGGACCAGGTACAGATCAGGACAGGCAATGCCCTGTTTGTTGAAAAGCACCTGCAGATCCTGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085052.3 |
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| CDS CAA 90 bp | TTGAACTCTGCCAGGATCTGCAGGTGCTTTTCAACAAACAGGGCATaGCCTGTCCTGATCTGTACCTGGTCCCCTGGATGGCTGAGCCTC | + |
|
Preference number: 6 (lower is better) Translates to: LNSARICRCFSTNRA*PVLICTWSPGWLSL Trigger: GAGGCTCAGCCATCCAGGGGACCAGGTACAGATCAGGACAGGCAATGCCCTGTTTGTTGAAAAGCACCTGCAGATCCTGGCAGAGTTCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085052.3 |
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| CDS GCA 72 bp | AGAGCCCTTGCCTTCTCCTTGAACTCTGCCAGGATCTaGAGGTGCTTTTCAACAAACAGGGCATTGCCTGTC | + |
|
Preference number: 6 (lower is better) Translates to: RALAFSLNSARI*RCFSTNRALPV Trigger: GACAGGCAATGCCCTGTTTGTTGAAAAGCACCTGCAGATCCTGGCAGAGTTCAAGGAGAAGGCAAGGGCTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085052.3 |
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| CDS GCA 72 bp | AGTGTGGTACAGAGCCCTTGCCTTCTCCTTGAACTCTaGCAGGATCTGCAGGTGCTTTTCAACAAACAGGGC | + |
|
Preference number: 6 (lower is better) Translates to: SVVQSPCLLLEL*QDLQVLFNKQG Trigger: GCCCTGTTTGTTGAAAAGCACCTGCAGATCCTGGCAGAGTTCAAGGAGAAGGCAAGGGCTCTGTACCACACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085052.3 |
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| CDS CCA 72 bp | GGATGGCTGAGCCTCTGTAGGAGGTGCTTAAAGCCCTaGTGGATGTCTGCCTCAGATGTTTCTGTCAGATTG | + |
|
Preference number: 6 (lower is better) Translates to: GWLSLCRRCLKP*WMSASDVSVRL Trigger: CAATCTGACAGAAACATCTGAGGCAGACATCCACCAGGGCTTTAAGCACCTCCTACAGAGGCTCAGCCATCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085052.3 |
||
| CDS CAA 90 bp | TTGGCTGTGAAGACCTCAGTGTGGTACAGAGCCCTTGCCTTCTCCTaGAACTCTGCCAGGATCTGCAGGTGCTTTTCAACAAACAGGGCA | + |
|
Preference number: 6 (lower is better) Translates to: LAVKTSVWYRALAFS*NSARICRCFSTNRA Trigger: TGCCCTGTTTGTTGAAAAGCACCTGCAGATCCTGGCAGAGTTCAAGGAGAAGGCAAGGGCTCTGTACCACACTGAGGTCTTCACAGCCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085052.3 |
||
| CDS TCA 72 bp | TGCCAGAAAGGTCAGCCTGTGTGGAGAAGAGTTCCCTaGTACCCAGCTCTGGAAGGATGTCTTCTAGGTTGT | + |
|
Preference number: 6 (lower is better) Translates to: CQKGQPVWRRVP*YPALEGCLLGC Trigger: ACAACCTAGAAGACATCCTTCCAGAGCTGGGTATCAGGGAACTCTTCTCCACACAGGCTGACCTTTCTGGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085052.3 |
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| CDS GCA 72 bp | CTTGCCTTCTCCTTGAACTCTGCCAGGATCTGCAGGTaGTTTTCAACAAACAGGGCATTGCCTGTCCTGATC | + |
|
Preference number: 6 (lower is better) Translates to: LAFSLNSARICR*FSTNRALPVLI Trigger: GATCAGGACAGGCAATGCCCTGTTTGTTGAAAAGCACCTGCAGATCCTGGCAGAGTTCAAGGAGAAGGCAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085052.3 |
||
| CDS CAA 72 bp | AAGACCTCAGTGTGGTACAGAGCCCTTGCCTTCTCCTaGAACTCTGCCAGGATCTGCAGGTGCTTTTCAACA | + |
|
Preference number: 6 (lower is better) Translates to: KTSVWYRALAFS*NSARICRCFST Trigger: TGTTGAAAAGCACCTGCAGATCCTGGCAGAGTTCAAGGAGAAGGCAAGGGCTCTGTACCACACTGAGGTCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085052.3 |
||
| CDS CCA 72 bp | TGGCTGAGCCTCTGTAGGAGGTGCTTAAAGCCCTGGTaGATGTCTGCCTCAGATGTTTCTGTCAGATTGAAT | + |
|
Preference number: 6 (lower is better) Translates to: WLSLCRRCLKPW*MSASDVSVRLN Trigger: ATTCAATCTGACAGAAACATCTGAGGCAGACATCCACCAGGGCTTTAAGCACCTCCTACAGAGGCTCAGCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085052.3 |
||
| CDS GCA 72 bp | GCCCTTTGCTCCCAGAGTCAAGGAGTTCAGAGCAGTTaGGATGCCAAAGGGAGAGAAGGCAATATTTTTATG | + |
|
Preference number: 6 (lower is better) Translates to: ALCSQSQGVQSS*DAKGREGNIFM Trigger: CATAAAAATATTGCCTTCTCTCCCTTTGGCATCGCAACTGCTCTGAACTCCTTGACTCTGGGAGCAAAGGGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000085052.3 |
||
| CDS CCA 72 bp | AGGAGAACTTGGGTAAGTGGAGCTCTTTTATCTTCCTaGGCCTCAAAGATTTCCTCCACTTCTTCAGGGTCC | + |
|
Preference number: 6 (lower is better) Translates to: RRTWVSGALLSS*ASKISSTSSGS Trigger: GGACCCTGAAGAAGTGGAGGAAATCTTTGAGGCCCAGGAAGATAAAAGAGCTCCACTTACCCAAGTTCTCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085052.3 |
||
| CDS CAA 90 bp | CCAAGGTGTTGCCCTTTGCTCCCAGAGTCAAGGAGTTCAGAGCAGTaGCGATGCCAAAGGGAGAGAAGGCAATATTTTTATGTGGATTCT | + |
|
Preference number: 6 (lower is better) Translates to: PRCCPLLPESRSSEQ*RCQRERRQYFYVDS Trigger: AGAATCCACATAAAAATATTGCCTTCTCTCCCTTTGGCATCGCAACTGCTCTGAACTCCTTGACTCTGGGAGCAAAGGGCAACACCTTGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000085052.3 |
||
| CDS TCA 72 bp | GGATCATCTCAGAGACTGTTATGTTCTTCACTCCTGTaGTGCCAGAAAGGTCAGCCTGTGTGGAGAAGAGTT | + |
|
Preference number: 6 (lower is better) Translates to: GSSQRLLCSSLL*CQKGQPVWRRV Trigger: AACTCTTCTCCACACAGGCTGACCTTTCTGGCATCACAGGAGTGAAGAACATAACAGTCTCTGAGATGATCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085052.3 |
||
| CDS GCA 72 bp | CTCCTTCTGTGCCTTTCTCAGTCATGTCCAGCTCAGTaGTGTGGATCATCTCAGAGACTGTTATGTTCTTCA | + |
|
Preference number: 6 (lower is better) Translates to: LLLCLSQSCPAQ*CGSSQRLLCSS Trigger: TGAAGAACATAACAGTCTCTGAGATGATCCACAGCACTGAGCTGGACATGACTGAGAAAGGCACAGAAGGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085052.3 |
||
| CDS CAA 72 bp | TGCCCTTTGCTCCCAGAGTCAAGGAGTTCAGAGCAGTaGCGATGCCAAAGGGAGAGAAGGCAATATTTTTAT | + |
|
Preference number: 6 (lower is better) Translates to: CPLLPESRSSEQ*RCQRERRQYFY Trigger: ATAAAAATATTGCCTTCTCTCCCTTTGGCATCGCAACTGCTCTGAACTCCTTGACTCTGGGAGCAAAGGGCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000085052.3 |
||
| CDS GCA 72 bp | TTGCTCCCAGAGTCAAGGAGTTCAGAGCAGTTGCGATaGCAAAGGGAGAGAAGGCAATATTTTTATGTGGAT | + |
|
Preference number: 6 (lower is better) Translates to: LLPESRSSEQLR*QRERRQYFYVD Trigger: ATCCACATAAAAATATTGCCTTCTCTCCCTTTGGCATCGCAACTGCTCTGAACTCCTTGACTCTGGGAGCAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000085052.3 |
||
| CDS CCA 72 bp | TGTCTTCTAGGTTGTAGTGTTGGGATAAGGAGAACTTaGGTAAGTGGAGCTCTTTTATCTTCCTGGGCCTCA | + |
|
Preference number: 6 (lower is better) Translates to: CLLGCSVGIRRT*VSGALLSSWAS Trigger: TGAGGCCCAGGAAGATAAAAGAGCTCCACTTACCCAAGTTCTCCTTATCCCAACACTACAACCTAGAAGACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085052.3 |
||
| CDS TCA 72 bp | ATTCACTATCACCATAGATGTATTGCCATCCATGTCTaGGACCAGTTCCTTGATCTTCCCCTGGGTCTGATT | + |
|
Preference number: 6 (lower is better) Translates to: IHYHHRCIAIHV*DQFLDLPLGLI Trigger: AATCAGACCCAGGGGAAGATCAAGGAACTGGTCTCAGACATGGATGGCAATACATCTATGGTGATAGTGAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085052.3 |
||
| CDS CCA 72 bp | GAAGTAGGGTGTCCTCAGGTTCTTAGTTTTCATCATTaGCACTTTCACATGCCTACTCCTGTCCACTATGAA | + |
|
Preference number: 6 (lower is better) Translates to: EVGCPQVLSFHH*HFHMPTPVHYE Trigger: TTCATAGTGGACAGGAGTAGGCATGTGAAAGTGCCAATGATGAAAACTAAGAACCTGAGGACACCCTACTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085052.3 |
||
| CDS CAA 72 bp | TTGAATTTAAGAACTTCTAGAATCTCTTCCAAGGTGTaGCCCTTTGCTCCCAGAGTCAAGGAGTTCAGAGCA | + |
|
Preference number: 6 (lower is better) Translates to: LNLRTSRISSKV*PFAPRVKEFRA Trigger: TGCTCTGAACTCCTTGACTCTGGGAGCAAAGGGCAACACCTTGGAAGAGATTCTAGAAGTTCTTAAATTCAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085052.3 |
||
| CDS CAA 90 bp | TCCTCAAATTTAACAAACACAGGTTTAAGTTTTGCAGACATGAAGTaGTATCCGACTATTGTGATTGCATCTCCTTCTGTGCCTTTCTCA | + |
|
Preference number: 6 (lower is better) Translates to: SSNLTNTGLSFADMK*YPTIVIASPSVPFS Trigger: TGAGAAAGGCACAGAAGGAGATGCAATCACAATAGTCGGATACAACTTCATGTCTGCAAAACTTAAACCTGTGTTTGTTAAATTTGAGGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085052.3 |
||
| CDS TCA 72 bp | ATAACCTTGCCCATTACATGGATCCACAAATCACCTTaGTCTAAAACAATGTACAGGAATTGGTCCTCAAAT | + |
|
Preference number: 6 (lower is better) Translates to: ITLPITWIHKSP*SKTMYRNWSSN Trigger: ATTTGAGGACCAATTCCTGTACATTGTTTTAGATCAAGGTGATTTGTGGATCCATGTAATGGGCAAGGTTAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085052.3 |
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