Pregenerated sensors for SERPINA3A (Mus musculus)
Ensembl gene IDs: ENSMUSG00000041536Ensembl transcript IDs: ENSMUST00000021496.8, ENSMUST00000109965.8, ENSMUST00000185595.7
Found 89 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GTCCCTCTTGTCACTAGAGGCCACCTCCTGCCAACAGGAGCTGAGTaGACACTGCCTGGACACTTTCTGTGCAGGTATAGGTTTATCTAC | + |
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Preference number: 1 (lower is better) Translates to: VPLVTRGHLLPTGAE*TLPGHFLCRYRFIY Trigger: GTAGATAAACCTATACCTGCACAGAAAGTGTCCAGGCAGTGTTCACTCAGCTCCTGTTGGCAGGAGGTGGCCTCTAGTGACAAGAGGGAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109965.8 |
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| 3UTR GCA 90 bp | AATTGGCATTGTTTAATGTCCCTCTTGTCACTAGAGGCCACCTCCTaGCAACAGGAGCTGAGTGAACACTGCCTGGACACTTTCTGTGCA | + |
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Preference number: 1 (lower is better) Translates to: NWHCLMSLLSLEATS*QQELSEHCLDTFCA Trigger: TGCACAGAAAGTGTCCAGGCAGTGTTCACTCAGCTCCTGTTGGCAGGAGGTGGCCTCTAGTGACAAGAGGGACATTAAACAATGCCAATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109965.8 |
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| 3UTR CCA 90 bp | GCTCCTACCTATTCATTTTGGGTGATGCAGATGGAGAAGTTCATCTaGGAAGTGGAAGAGAGACAGATTTCAGGCCCAGGAATATGTGCT | + |
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Preference number: 1 (lower is better) Translates to: APTYSFWVMQMEKFI*EVEERQISGPGICA Trigger: AGCACATATTCCTGGGCCTGAAATCTGTCTCTCTTCCACTTCCCAGATGAACTTCTCCATCTGCATCACCCAAAATGAATAGGTAGGAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109965.8 ENSMUST00000185595.7 |
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| 3UTR GCA 90 bp | CACTGCCTGGACACTTTCTGTGCAGGTATAGGTTTATCTACTGTTTaGTCCTACCTATTCATTTTGGGTGATGCAGATGGAGAAGTTCAT | + |
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Preference number: 1 (lower is better) Translates to: HCLDTFCAGIGLSTV*SYLFILGDADGEVH Trigger: ATGAACTTCTCCATCTGCATCACCCAAAATGAATAGGTAGGAGCAAACAGTAGATAAACCTATACCTGCACAGAAAGTGTCCAGGCAGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109965.8 |
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| 3UTR TCA 90 bp | GGACTGATGCCTGACACAGACCATCCACAGTCCCTTGTGTATGTGTaGCCACTAAAGTTAATCAACTTCAGTGAACAATTACAAGCATAT | + |
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Preference number: 1 (lower is better) Translates to: GLMPDTDHPQSLVYV*PLKLINFSEQLQAY Trigger: ATATGCTTGTAATTGTTCACTGAAGTTGATTAACTTTAGTGGTCACACATACACAAGGGACTGTGGATGGTCTGTGTCAGGCATCAGTCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109965.8 ENSMUST00000185595.7 |
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| 3UTR CAA 90 bp | TGTGCAGGTATAGGTTTATCTACTGTTTGCTCCTACCTATTCATTTaGGGTGATGCAGATGGAGAAGTTCATCTGGGAAGTGGAAGAGAG | + |
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Preference number: 2 (lower is better) Translates to: CAGIGLSTVCSYLFI*GDADGEVHLGSGRE Trigger: CTCTCTTCCACTTCCCAGATGAACTTCTCCATCTGCATCACCCAAAATGAATAGGTAGGAGCAAACAGTAGATAAACCTATACCTGCACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109965.8 |
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| 3UTR GCA 72 bp | TGTTTAATGTCCCTCTTGTCACTAGAGGCCACCTCCTaGCAACAGGAGCTGAGTGAACACTGCCTGGACACT | + |
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Preference number: 3 (lower is better) Translates to: CLMSLLSLEATS*QQELSEHCLDT Trigger: AGTGTCCAGGCAGTGTTCACTCAGCTCCTGTTGGCAGGAGGTGGCCTCTAGTGACAAGAGGGACATTAAACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109965.8 |
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| 3UTR-3UTR CAA 90 bp | GAAGAGAGACAGATTTCAGGCCCAGGAATATGTGCTAGTGATGCCAACAGGACTAAAAGCAAATCAAACTaGGAAAGAAGCCCCACCACT | + |
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Preference number: 3 (lower is better) Translates to: EERQISGPGICASDANRTKSKSN*ERSPTT Trigger: AGTGGTGGGGCTTCTTTCCAAGTTTGATTTGCTTTT...AGTCCTGTTGGCATCACTAGCACATATTCCTGGGCCTGAAATCTGTCTCTCTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000109965.8 ENSMUST00000185595.7 |
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| 3UTR-3UTR CAA 90 bp | GAAGTGGAAGAGAGACAGATTTCAGGCCCAGGAATATGTGCTAGTGATGCCAACAAAAGCAAATCAAACTaGGAAAGAAGCCCCACCACT | + |
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Preference number: 3 (lower is better) Translates to: EVEERQISGPGICASDANKSKSN*ERSPTT Trigger: AGTGGTGGGGCTTCTTTCCAAGTTTGATTTGCTTTT...GTTGGCATCACTAGCACATATTCCTGGGCCTGAAATCTGTCTCTCTTCCACTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000109965.8 ENSMUST00000185595.7 |
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| 3UTR TCA 72 bp | CCTGACACAGACCATCCACAGTCCCTTGTGTATGTGTaGCCACTAAAGTTAATCAACTTCAGTGAACAATTA | + |
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Preference number: 3 (lower is better) Translates to: PDTDHPQSLVYV*PLKLINFSEQL Trigger: TAATTGTTCACTGAAGTTGATTAACTTTAGTGGTCACACATACACAAGGGACTGTGGATGGTCTGTGTCAGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109965.8 ENSMUST00000185595.7 |
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| 3UTR TCA 72 bp | TTTATCTACTGTTTGCTCCTACCTATTCATTTTGGGTaGTGCAGATGGAGAAGTTCATCTGGGAAGTGGAAG | + |
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Preference number: 3 (lower is better) Translates to: FIYCLLLPIHFG*CRWRSSSGKWK Trigger: CTTCCACTTCCCAGATGAACTTCTCCATCTGCATCACCCAAAATGAATAGGTAGGAGCAAACAGTAGATAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109965.8 ENSMUST00000185595.7 |
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| 3UTR GCA 72 bp | GACACTTTCTGTGCAGGTATAGGTTTATCTACTGTTTaGTCCTACCTATTCATTTTGGGTGATGCAGATGGA | + |
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Preference number: 3 (lower is better) Translates to: DTFCAGIGLSTV*SYLFILGDADG Trigger: TCCATCTGCATCACCCAAAATGAATAGGTAGGAGCAAACAGTAGATAAACCTATACCTGCACAGAAAGTGTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109965.8 |
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| CDS-3UTR TCA 90 bp | AAGTTCATCTGGGAAGTGGAAGAGAGACAGATTTCAGGCCCAGGAATATGTGCTTTGCTCCCAGGGACATaGGGGCCAAGGCAGCTGAGA | + |
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Preference number: 4 (lower is better) Translates to: KFIWEVEERQISGPGICALLPGT*GPRQLR Trigger: TCTCAGCTGCCTTGGCCCTCATGTCCCTGGGAGCAA...AGCACATATTCCTGGGCCTGAAATCTGTCTCTCTTCCACTTCCCAGATGAACTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000185595.7 |
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| CDS-3UTR GCA 90 bp | CCTACCTATTCATTTTGGGTGATGCAGATGGAGAAGTTCATCTGGGAAGTGGAAGTGTGCCTTCCCAGTTaGCCATCTGCAGTTGCCCAG | + |
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Preference number: 4 (lower is better) Translates to: PTYSFWVMQMEKFIWEVEVCLPS*PSAVAQ Trigger: CTGGGCAACTGCAGATGGGCAACTGGGAAGGCACAC...TTCCACTTCCCAGATGAACTTCTCCATCTGCATCACCCAAAATGAATAGGTAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000185595.7 |
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| CDS-3UTR GCA 90 bp | GAAGAGAGACAGATTTCAGGCCCAGGAATATGTGCTAGTGATGCCAACAGGACTCTCAGAGACTGGGGTTaGAAGCTATCTTCCACGTGC | + |
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Preference number: 4 (lower is better) Translates to: EERQISGPGICASDANRTLRDWG*KLSSTC Trigger: GCACGTGGAAGATAGCTTGCAACCCCAGTCTCTGAG...AGTCCTGTTGGCATCACTAGCACATATTCCTGGGCCTGAAATCTGTCTCTCTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109965.8 ENSMUST00000185595.7 |
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| CDS-3UTR TCA 90 bp | TTCATCTGGGAAGTGGAAGAGAGACAGATTTCAGGCCCAGGAATATGTGCTAGTCTGAGACCAGTTCCTTaGTCTTCCCCTGGGTCTGTT | + |
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Preference number: 4 (lower is better) Translates to: FIWEVEERQISGPGICASLRPVP*SSPGSV Trigger: AACAGACCCAGGGGAAGATCAAGGAACTGGTCTCAG...ACTAGCACATATTCCTGGGCCTGAAATCTGTCTCTCTTCCACTTCCCAGATGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000185595.7 |
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| CDS-3UTR GCA 90 bp | AAGTGGAAGAGAGACAGATTTCAGGCCCAGGAATATGTGCTAGTGATGCCAACAGTTCTGGTGGATGTCTaGTTCTGGGGTCTCTGTGAG | + |
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Preference number: 4 (lower is better) Translates to: KWKRDRFQAQEYVLVMPTVLVDV*FWGLCE Trigger: CTCACAGAGACCCCAGAAGCAGACATCCACCAGAAC...TGTTGGCATCACTAGCACATATTCCTGGGCCTGAAATCTGTCTCTCTTCCACTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000185595.7 |
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| CDS-3UTR TCA 90 bp | AAGTTCATCTGGGAAGTGGAAGAGAGACAGATTTCAGGCCCAGGAATATGTGCTTGGAGAAGACTTCCTTaGTACCCAGCTCTGGAAGGA | + |
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Preference number: 4 (lower is better) Translates to: KFIWEVEERQISGPGICAWRRLP*YPALEG Trigger: TCCTTCCAGAGCTGGGTATCAAGGAAGTCTTCTCCA...AGCACATATTCCTGGGCCTGAAATCTGTCTCTCTTCCACTTCCCAGATGAACTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109965.8 ENSMUST00000185595.7 |
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| CDS-3UTR GCA 90 bp | CTGTTTGCTCCTACCTATTCATTTTGGGTGATGCAGATGGAGAAGTTCATCTGGCTCAGAGACTGGGGTTaGAAGCTATCTTCCACGTGC | + |
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Preference number: 4 (lower is better) Translates to: LFAPTYSFWVMQMEKFIWLRDWG*KLSSTC Trigger: GCACGTGGAAGATAGCTTGCAACCCCAGTCTCTGAG...CCAGATGAACTTCTCCATCTGCATCACCCAAAATGAATAGGTAGGAGCAAACAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000109965.8 ENSMUST00000185595.7 |
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| CDS-3UTR CCA 90 bp | GAAGAGAGACAGATTTCAGGCCCAGGAATATGTGCTAGTGATGCCAACAGGACTGTTCATCTAGCATCCTaGGCCTCAAAGATTTCCTCC | + |
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Preference number: 4 (lower is better) Translates to: EERQISGPGICASDANRTVHLAS*ASKISS Trigger: GGAGGAAATCTTTGAGGCCCAGGATGCTAGATGAAC...AGTCCTGTTGGCATCACTAGCACATATTCCTGGGCCTGAAATCTGTCTCTCTTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109965.8 ENSMUST00000185595.7 |
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| CDS-3UTR TCA 90 bp | TTTGCTCCTACCTATTCATTTTGGGTGATGCAGATGGAGAAGTTCATCTGGGAAGGTTCTCTGGCTGAATaGGCATTTGTAGGAGGTGCC | + |
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Preference number: 4 (lower is better) Translates to: FAPTYSFWVMQMEKFIWEGSLAE*AFVGGA Trigger: GGCACCTCCTACAAATGCTCATTCAGCCAGAGAACC...TTCCCAGATGAACTTCTCCATCTGCATCACCCAAAATGAATAGGTAGGAGCAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000185595.7 |
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| CDS-3UTR TCA 90 bp | ACTGTTTGCTCCTACCTATTCATTTTGGGTGATGCAGATGGAGAAGTTCATCTGACTGGAAGTCTGCTGTaGAGGCCTCAGCCTTGTACA | + |
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Preference number: 4 (lower is better) Translates to: TVCSYLFILGDADGEVHLTGSLL*RPQPCT Trigger: TGTACAAGGCTGAGGCCTTCACAGCAGACTTCCAGT...CAGATGAACTTCTCCATCTGCATCACCCAAAATGAATAGGTAGGAGCAAACAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000185595.7 |
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| CDS-3UTR GCA 90 bp | TTTGCTCCTACCTATTCATTTTGGGTGATGCAGATGGAGAAGTTCATCTGGGAATTGCCCATCTGCAGTTaGCCAGTAGGTGATAGCAGG | + |
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Preference number: 4 (lower is better) Translates to: FAPTYSFWVMQMEKFIWELPICS*PVGDSR Trigger: CCTGCTATCACCTACTGGGCAACTGCAGATGGGCAA...TTCCCAGATGAACTTCTCCATCTGCATCACCCAAAATGAATAGGTAGGAGCAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000185595.7 |
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| CDS-3UTR CCA 90 bp | CTGTTTGCTCCTACCTATTCATTTTGGGTGATGCAGATGGAGAAGTTCATCTGGTGGTCTCTGTCTTTCTaGACTTCAGTGTGCCTTCCC | + |
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Preference number: 4 (lower is better) Translates to: LFAPTYSFWVMQMEKFIWWSLSF*TSVCLP Trigger: GGGAAGGCACACTGAAGTCCAGAAAGACAGAGACCA...CCAGATGAACTTCTCCATCTGCATCACCCAAAATGAATAGGTAGGAGCAAACAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000185595.7 |
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| CDS-3UTR CCA 90 bp | AAGTGGAAGAGAGACAGATTTCAGGCCCAGGAATATGTGCTAGTGATGCCAACAGTTCATCTAGCATCCTaGGCCTCAAAGATTTCCTCC | + |
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Preference number: 4 (lower is better) Translates to: KWKRDRFQAQEYVLVMPTVHLAS*ASKISS Trigger: GGAGGAAATCTTTGAGGCCCAGGATGCTAGATGAAC...TGTTGGCATCACTAGCACATATTCCTGGGCCTGAAATCTGTCTCTCTTCCACTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109965.8 ENSMUST00000185595.7 |
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| CDS-3UTR CCA 90 bp | GAAGAGAGACAGATTTCAGGCCCAGGAATATGTGCTAGTGATGCCAACAGGACTGTGATAAGGAGAACTTaGGCAGGGAGAGTTCATCTA | + |
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Preference number: 4 (lower is better) Translates to: EERQISGPGICASDANRTVIRRT*AGRVHL Trigger: TAGATGAACTCTCCCTGCCCAAGTTCTCCTTATCAC...AGTCCTGTTGGCATCACTAGCACATATTCCTGGGCCTGAAATCTGTCTCTCTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109965.8 ENSMUST00000185595.7 |
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| CDS-3UTR TCA 90 bp | TATCCTAGCCAATCAGAGGATAGAAGCCAAAAAGCAAATCAAACTTGGAAAGAAGAGGGCCAAGGCAGCTaGGATGCTAAGTGGGGAGAA | + |
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Preference number: 4 (lower is better) Translates to: YPSQSEDRSQKANQTWKEEGQGS*DAKWGE Trigger: TTCTCCCCACTTAGCATCTCAGCTGCCTTGGCCCTC...TTCTTTCCAAGTTTGATTTGCTTTTTGGCTTCTATCCTCTGATTGGCTAGGATA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000185595.7 |
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| CDS-3UTR TCA 90 bp | TTTGCTCCTACCTATTCATTTTGGGTGATGCAGATGGAGAAGTTCATCTGGGAACCCTTGCCTTCTCCTTaGACTCTGTCAAGATCTGCA | + |
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Preference number: 4 (lower is better) Translates to: FAPTYSFWVMQMEKFIWEPLPSP*TLSRSA Trigger: TGCAGATCTTGACAGAGTTCAAGGAGAAGGCAAGGG...TTCCCAGATGAACTTCTCCATCTGCATCACCCAAAATGAATAGGTAGGAGCAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000185595.7 |
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| CDS-3UTR CCA 90 bp | TTTGCTCCTACCTATTCATTTTGGGTGATGCAGATGGAGAAGTTCATCTGGGAACCTCGGTTTTCATCATaGGCACATTCACGGTCCTCT | + |
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Preference number: 4 (lower is better) Translates to: FAPTYSFWVMQMEKFIWEPRFSS*AHSRSS Trigger: AGAGGACCGTGAATGTGCCCATGATGAAAACCGAGG...TTCCCAGATGAACTTCTCCATCTGCATCACCCAAAATGAATAGGTAGGAGCAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000109965.8 ENSMUST00000185595.7 |
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| CDS-3UTR CCA 90 bp | AGCCAATCAGAGGATAGAAGCCAAAAAGCAAATCAAACTTGGAAAGAAGCCCCACCTCGGTTTTCATCATaGGCACATTCACGGTCCTCT | + |
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Preference number: 4 (lower is better) Translates to: SQSEDRSQKANQTWKEAPPRFSS*AHSRSS Trigger: AGAGGACCGTGAATGTGCCCATGATGAAAACCGAGG...TGGGGCTTCTTTCCAAGTTTGATTTGCTTTTTGGCTTCTATCCTCTGATTGGCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000109965.8 ENSMUST00000185595.7 |
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| CDS-3UTR CCA 90 bp | CTGTTTGCTCCTACCTATTCATTTTGGGTGATGCAGATGGAGAAGTTCATCTGGCCCGGAAGTAGTTTGTaGTTAGCTCCTCGGTTTTCA | + |
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Preference number: 4 (lower is better) Translates to: LFAPTYSFWVMQMEKFIWPGSSL*LAPRFS Trigger: TGAAAACCGAGGAGCTAACCACAAACTACTTCCGGG...CCAGATGAACTTCTCCATCTGCATCACCCAAAATGAATAGGTAGGAGCAAACAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000109965.8 ENSMUST00000185595.7 |
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| CDS-3UTR CCA 90 bp | CTGTTTGCTCCTACCTATTCATTTTGGGTGATGCAGATGGAGAAGTTCATCTGGCATTTCCTCAGAGACTaGGGTTGCAAGCTATCTTCC | + |
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Preference number: 4 (lower is better) Translates to: LFAPTYSFWVMQMEKFIWHFLRD*GCKLSS Trigger: GGAAGATAGCTTGCAACCCCAGTCTCTGAGGAAATG...CCAGATGAACTTCTCCATCTGCATCACCCAAAATGAATAGGTAGGAGCAAACAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109965.8 ENSMUST00000185595.7 |
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| CDS-3UTR TCA 90 bp | GAAGAGAGACAGATTTCAGGCCCAGGAATATGTGCTAGTGATGCCAACAGGACTAAAAGCCTTGAAAGTTaGGGAAATTCACTAGTGCCA | + |
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Preference number: 4 (lower is better) Translates to: EERQISGPGICASDANRTKSLES*GNSLVP Trigger: TGGCACTAGTGAATTTCCTCAACTTTCAAGGCTTTT...AGTCCTGTTGGCATCACTAGCACATATTCCTGGGCCTGAAATCTGTCTCTCTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000185595.7 |
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| CDS-3UTR TCA 90 bp | GAAGAGAGACAGATTTCAGGCCCAGGAATATGTGCTAGTGATGCCAACAGGACTACGTTCCAAAAGCCTTaGAAGTTGAGGAAATTCACT | + |
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Preference number: 4 (lower is better) Translates to: EERQISGPGICASDANRTTFQKP*KLRKFT Trigger: AGTGAATTTCCTCAACTTTCAAGGCTTTTGGAACGT...AGTCCTGTTGGCATCACTAGCACATATTCCTGGGCCTGAAATCTGTCTCTCTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000185595.7 |
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| CDS-3UTR TCA 90 bp | GGTTTATCTACTGTTTGCTCCTACCTATTCATTTTGGGTGATGCAGATGGAGAATGGAGAAGACTTCCTTaGTACCCAGCTCTGGAAGGA | + |
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Preference number: 4 (lower is better) Translates to: GLSTVCSYLFILGDADGEWRRLP*YPALEG Trigger: TCCTTCCAGAGCTGGGTATCAAGGAAGTCTTCTCCA...TTCTCCATCTGCATCACCCAAAATGAATAGGTAGGAGCAAACAGTAGATAAACC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109965.8 ENSMUST00000185595.7 |
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| CDS-3UTR GCA 90 bp | AGCCAATCAGAGGATAGAAGCCAAAAAGCAAATCAAACTTGGAAAGAAGCCCCACTTGTACAGAGCCCTTaGCTTCTCCTTGAACTCTGT | + |
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Preference number: 4 (lower is better) Translates to: SQSEDRSQKANQTWKEAPLVQSP*LLLELC Trigger: ACAGAGTTCAAGGAGAAGGCAAGGGCTCTGTACAAG...TGGGGCTTCTTTCCAAGTTTGATTTGCTTTTTGGCTTCTATCCTCTGATTGGCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000185595.7 |
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| CDS-3UTR CCA 90 bp | TTTGCTCCTACCTATTCATTTTGGGTGATGCAGATGGAGAAGTTCATCTGGGAAGTGGATGTCTGCTTCTaGGGTCTCTGTGAGATTGAA | + |
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Preference number: 4 (lower is better) Translates to: FAPTYSFWVMQMEKFIWEVDVCF*GLCEIE Trigger: TTCAATCTCACAGAGACCCCAGAAGCAGACATCCAC...TTCCCAGATGAACTTCTCCATCTGCATCACCCAAAATGAATAGGTAGGAGCAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000185595.7 |
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| CDS-3UTR CCA 90 bp | TACCTATTCATTTTGGGTGATGCAGATGGAGAAGTTCATCTGGGAAGTGGAAGACCCGGAAGTAGTTTGTaGTTAGCTCCTCGGTTTTCA | + |
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Preference number: 4 (lower is better) Translates to: YLFILGDADGEVHLGSGRPGSSL*LAPRFS Trigger: TGAAAACCGAGGAGCTAACCACAAACTACTTCCGGG...TCTTCCACTTCCCAGATGAACTTCTCCATCTGCATCACCCAAAATGAATAGGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000109965.8 ENSMUST00000185595.7 |
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| CDS-3UTR CCA 90 bp | TATTCATTTTGGGTGATGCAGATGGAGAAGTTCATCTGGGAAGTGGAAGAGAGACATTTCCTCAGAGACTaGGGTTGCAAGCTATCTTCC | + |
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Preference number: 4 (lower is better) Translates to: YSFWVMQMEKFIWEVEERHFLRD*GCKLSS Trigger: GGAAGATAGCTTGCAACCCCAGTCTCTGAGGAAATG...TCTCTCTTCCACTTCCCAGATGAACTTCTCCATCTGCATCACCCAAAATGAATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109965.8 ENSMUST00000185595.7 |
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| CDS-3UTR GCA 90 bp | TATTCATTTTGGGTGATGCAGATGGAGAAGTTCATCTGGGAAGTGGAAGAGAGAACAGGAAGCTGGCATTaGCTATGTAATTCAGCTCCA | + |
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Preference number: 4 (lower is better) Translates to: YSFWVMQMEKFIWEVEERTGSWH*LCNSAP Trigger: TGGAGCTGAATTACATAGGCAATGCCAGCTTCCTGT...TCTCTCTTCCACTTCCCAGATGAACTTCTCCATCTGCATCACCCAAAATGAATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109965.8 ENSMUST00000185595.7 |
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| CDS-3UTR GCA 90 bp | AGCCAATCAGAGGATAGAAGCCAAAAAGCAAATCAAACTTGGAAAGAAGCCCCAACAGGAAGCTGGCATTaGCTATGTAATTCAGCTCCA | + |
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Preference number: 4 (lower is better) Translates to: SQSEDRSQKANQTWKEAPTGSWH*LCNSAP Trigger: TGGAGCTGAATTACATAGGCAATGCCAGCTTCCTGT...TGGGGCTTCTTTCCAAGTTTGATTTGCTTTTTGGCTTCTATCCTCTGATTGGCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000109965.8 ENSMUST00000185595.7 |
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| CDS-3UTR CCA 90 bp | TTTGCTCCTACCTATTCATTTTGGGTGATGCAGATGGAGAAGTTCATCTGGGAAGTGATAAGGAGAACTTaGGCAGGGAGAGTTCATCTA | + |
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Preference number: 4 (lower is better) Translates to: FAPTYSFWVMQMEKFIWEVIRRT*AGRVHL Trigger: TAGATGAACTCTCCCTGCCCAAGTTCTCCTTATCAC...TTCCCAGATGAACTTCTCCATCTGCATCACCCAAAATGAATAGGTAGGAGCAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109965.8 ENSMUST00000185595.7 |
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| CDS-3UTR GCA 90 bp | AAGTGGAAGAGAGACAGATTTCAGGCCCAGGAATATGTGCTAGTGATGCCAACAAACTCTGTCAAGATCTaGAGGTGCTTATCAATAAAC | + |
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Preference number: 4 (lower is better) Translates to: KWKRDRFQAQEYVLVMPTNSVKI*RCLSIN Trigger: GTTTATTGATAAGCACCTGCAGATCTTGACAGAGTT...TGTTGGCATCACTAGCACATATTCCTGGGCCTGAAATCTGTCTCTCTTCCACTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000185595.7 |
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| CDS-3UTR CCA 90 bp | ACTGTTTGCTCCTACCTATTCATTTTGGGTGATGCAGATGGAGAAGTTCATCTGAATTCACTAGTGCCATaGATGTGTTCCTATGCAGGT | + |
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Preference number: 4 (lower is better) Translates to: TVCSYLFILGDADGEVHLNSLVP*MCSYAG Trigger: ACCTGCATAGGAACACATCCATGGCACTAGTGAATT...CAGATGAACTTCTCCATCTGCATCACCCAAAATGAATAGGTAGGAGCAAACAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000185595.7 |
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| 3UTR CAA 72 bp | ATAGGTTTATCTACTGTTTGCTCCTACCTATTCATTTaGGGTGATGCAGATGGAGAAGTTCATCTGGGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: IGLSTVCSYLFI*GDADGEVHLGS Trigger: ACTTCCCAGATGAACTTCTCCATCTGCATCACCCAAAATGAATAGGTAGGAGCAAACAGTAGATAAACCTAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109965.8 ENSMUST00000185595.7 |
||
| CDS GCA 90 bp | GTCTCTGTCTTTCTGGACTTCAGTGTGCCTTCCCAGTTGCCCATCTaGAGTTGCCCAGTAGGTGATAGCAGGACAGATTCCCGCCATCAG | + |
|
Preference number: 5 (lower is better) Translates to: VSVFLDFSVPSQLPI*SCPVGDSRTDSRHQ Trigger: CTGATGGCGGGAATCTGTCCTGCTATCACCTACTGGGCAACTGCAGATGGGCAACTGGGAAGGCACACTGAAGTCCAGAAAGACAGAGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021496.8 ENSMUST00000185595.7 |
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| CDS GCA 90 bp | ATCCTGGGCCTCAAAGATTTCCTCCATTTCCTCAGAGACTGGGGTTaGAAGCTATCTTCCACGTGCTGTATCCTGCCCTGGTCAGGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: ILGLKDFLHFLRDWG*KLSSTCCILPWSGR Trigger: CCTCCCTGACCAGGGCAGGATACAGCACGTGGAAGATAGCTTGCAACCCCAGTCTCTGAGGAAATGGAGGAAATCTTTGAGGCCCAGGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021496.8 ENSMUST00000109965.8 ENSMUST00000185595.7 |
||
| CDS GCA 90 bp | TTCCTCCATTTCCTCAGAGACTGGGGTTGCAAGCTATCTTCCACGTaGTGTATCCTGCCCTGGTCAGGGAGGATAAACAGGAAGCTGGCA | + |
|
Preference number: 5 (lower is better) Translates to: FLHFLRDWGCKLSST*CILPWSGRINRKLA Trigger: TGCCAGCTTCCTGTTTATCCTCCCTGACCAGGGCAGGATACAGCACGTGGAAGATAGCTTGCAACCCCAGTCTCTGAGGAAATGGAGGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021496.8 ENSMUST00000109965.8 ENSMUST00000185595.7 |
||
| CDS CCA 90 bp | TCTAGCATCCTGGGCCTCAAAGATTTCCTCCATTTCCTCAGAGACTaGGGTTGCAAGCTATCTTCCACGTGCTGTATCCTGCCCTGGTCA | + |
|
Preference number: 5 (lower is better) Translates to: SSILGLKDFLHFLRD*GCKLSSTCCILPWS Trigger: TGACCAGGGCAGGATACAGCACGTGGAAGATAGCTTGCAACCCCAGTCTCTGAGGAAATGGAGGAAATCTTTGAGGCCCAGGATGCTAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021496.8 ENSMUST00000109965.8 ENSMUST00000185595.7 |
||
| CDS-3UTR CAA 90 bp | GAAGTGGAAGAGAGACAGATTTCAGGCCCAGGAATATGTGCTAGTGATGCCAACGTGAAGGCCTCAGCCTaGTACAGAGCCCTTGCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: EVEERQISGPGICASDANVKASA*YRALAF Trigger: GAAGGCAAGGGCTCTGTACAAGGCTGAGGCCTTCAC...GTTGGCATCACTAGCACATATTCCTGGGCCTGAAATCTGTCTCTCTTCCACTTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000185595.7 |
||
| CDS CCA 90 bp | CTTGTGATAAGGAGAACTTGGGCAGGGAGAGTTCATCTAGCATCCTaGGCCTCAAAGATTTCCTCCATTTCCTCAGAGACTGGGGTTGCA | + |
|
Preference number: 5 (lower is better) Translates to: LVIRRTWAGRVHLAS*ASKISSISSETGVA Trigger: TGCAACCCCAGTCTCTGAGGAAATGGAGGAAATCTTTGAGGCCCAGGATGCTAGATGAACTCTCCCTGCCCAAGTTCTCCTTATCACAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021496.8 ENSMUST00000109965.8 ENSMUST00000185595.7 |
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| CDS CCA 90 bp | TCAGTGTTGATGGAAGCCAGTGTGACACTGTCCAGTTGTATTTCATaGTCTCTGTCTTTCTGGACTTCAGTGTGCCTTCCCAGTTGCCCA | + |
|
Preference number: 5 (lower is better) Translates to: SVLMEASVTLSSCIS*SLSFWTSVCLPSCP Trigger: TGGGCAACTGGGAAGGCACACTGAAGTCCAGAAAGACAGAGACCATGAAATACAACTGGACAGTGTCACACTGGCTTCCATCAACACTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021496.8 ENSMUST00000185595.7 |
||
| CDS-3UTR CAA 90 bp | GAAGTGGAAGAGAGACAGATTTCAGGCCCAGGAATATGTGCTAGTGATGCCAACAAGGCAAAGTCAGTGTaGATGGAAGCCAGTGTGACA | + |
|
Preference number: 5 (lower is better) Translates to: EVEERQISGPGICASDANKAKSV*MEASVT Trigger: TGTCACACTGGCTTCCATCAACACTGACTTTGCCTT...GTTGGCATCACTAGCACATATTCCTGGGCCTGAAATCTGTCTCTCTTCCACTTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000185595.7 |
||
| CDS-3UTR CAA 90 bp | GAAGTGGAAGAGAGACAGATTTCAGGCCCAGGAATATGTGCTAGTGATGCCAACGGGGTCTCTGTGAGATaGAACTTGAGACCTTCTAGA | + |
|
Preference number: 5 (lower is better) Translates to: EVEERQISGPGICASDANGVSVR*NLRPSR Trigger: TCTAGAAGGTCTCAAGTTCAATCTCACAGAGACCCC...GTTGGCATCACTAGCACATATTCCTGGGCCTGAAATCTGTCTCTCTTCCACTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000185595.7 |
||
| CDS-3UTR CAA 90 bp | TACCTATTCATTTTGGGTGATGCAGATGGAGAAGTTCATCTGGGAAGTGGAAGATCTGAGACCAGTTCCTaGATCTTCCCCTGGGTCTGT | + |
|
Preference number: 5 (lower is better) Translates to: YLFILGDADGEVHLGSGRSETSS*IFPWVC Trigger: ACAGACCCAGGGGAAGATCAAGGAACTGGTCTCAGA...TCTTCCACTTCCCAGATGAACTTCTCCATCTGCATCACCCAAAATGAATAGGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000185595.7 |
||
| CDS-3UTR CAA 90 bp | ACTGTTTGCTCCTACCTATTCATTTTGGGTGATGCAGATGGAGAAGTTCATCTGGTGGAGAAGACTTCCTaGATACCCAGCTCTGGAAGG | + |
|
Preference number: 5 (lower is better) Translates to: TVCSYLFILGDADGEVHLVEKTS*IPSSGR Trigger: CCTTCCAGAGCTGGGTATCAAGGAAGTCTTCTCCAC...CAGATGAACTTCTCCATCTGCATCACCCAAAATGAATAGGTAGGAGCAAACAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109965.8 ENSMUST00000185595.7 |
||
| CDS-3UTR CAA 90 bp | AGCCAATCAGAGGATAGAAGCCAAAAAGCAAATCAAACTTGGAAAGAAGCCCCAGTGGAGAAGACTTCCTaGATACCCAGCTCTGGAAGG | + |
|
Preference number: 5 (lower is better) Translates to: SQSEDRSQKANQTWKEAPVEKTS*IPSSGR Trigger: CCTTCCAGAGCTGGGTATCAAGGAAGTCTTCTCCAC...TGGGGCTTCTTTCCAAGTTTGATTTGCTTTTTGGCTTCTATCCTCTGATTGGCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000109965.8 ENSMUST00000185595.7 |
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| CDS TCA 90 bp | ACGTGTCTTCAGGGTCAAAAGTCACGTTCCAAAAGCCTTGAAAGTTaGGGAAATTCACTAGTGCCATGGATGTGTTCCTATGCAGGTCTG | + |
|
Preference number: 5 (lower is better) Translates to: TCLQGQKSRSKSLES*GNSLVPWMCSYAGL Trigger: CAGACCTGCATAGGAACACATCCATGGCACTAGTGAATTTCCTCAACTTTCAAGGCTTTTGGAACGTGACTTTTGACCCTGAAGACACGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021496.8 ENSMUST00000185595.7 |
||
| CDS-3UTR CAA 90 bp | CTGTTTGCTCCTACCTATTCATTTTGGGTGATGCAGATGGAGAAGTTCATCTGGTGTGACACTGTCCAGTaGTATTTCATGGTCTCTGTC | + |
|
Preference number: 5 (lower is better) Translates to: LFAPTYSFWVMQMEKFIWCDTVQ*YFMVSV Trigger: GACAGAGACCATGAAATACAACTGGACAGTGTCACA...CCAGATGAACTTCTCCATCTGCATCACCCAAAATGAATAGGTAGGAGCAAACAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000185595.7 |
||
| CDS-3UTR CAA 90 bp | ACTGTTTGCTCCTACCTATTCATTTTGGGTGATGCAGATGGAGAAGTTCATCTGTGTGATAAGGAGAACTaGGGCAGGGAGAGTTCATCT | + |
|
Preference number: 5 (lower is better) Translates to: TVCSYLFILGDADGEVHLCDKEN*GRESSS Trigger: AGATGAACTCTCCCTGCCCAAGTTCTCCTTATCACA...CAGATGAACTTCTCCATCTGCATCACCCAAAATGAATAGGTAGGAGCAAACAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109965.8 ENSMUST00000185595.7 |
||
| CDS-3UTR CAA 90 bp | AGCCAATCAGAGGATAGAAGCCAAAAAGCAAATCAAACTTGGAAAGAAGCCCCATGTGATAAGGAGAACTaGGGCAGGGAGAGTTCATCT | + |
|
Preference number: 5 (lower is better) Translates to: SQSEDRSQKANQTWKEAPCDKEN*GRESSS Trigger: AGATGAACTCTCCCTGCCCAAGTTCTCCTTATCACA...TGGGGCTTCTTTCCAAGTTTGATTTGCTTTTTGGCTTCTATCCTCTGATTGGCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000109965.8 ENSMUST00000185595.7 |
||
| CDS-3UTR CAA 90 bp | GTTTGCTCCTACCTATTCATTTTGGGTGATGCAGATGGAGAAGTTCATCTGGGAGAGACTCTTATATTTTaGGCTCCAGTGATCCCAGAC | + |
|
Preference number: 5 (lower is better) Translates to: VCSYLFILGDADGEVHLGETLIF*APVIPD Trigger: GTCTGGGATCACTGGAGCCAAAAATATAAGAGTCTC...TCCCAGATGAACTTCTCCATCTGCATCACCCAAAATGAATAGGTAGGAGCAAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000109965.8 ENSMUST00000185595.7 |
||
| CDS-3UTR CAA 90 bp | AGCCAATCAGAGGATAGAAGCCAAAAAGCAAATCAAACTTGGAAAGAAGCCCCAGAGACTCTTATATTTTaGGCTCCAGTGATCCCAGAC | + |
|
Preference number: 5 (lower is better) Translates to: SQSEDRSQKANQTWKEAPETLIF*APVIPD Trigger: GTCTGGGATCACTGGAGCCAAAAATATAAGAGTCTC...TGGGGCTTCTTTCCAAGTTTGATTTGCTTTTTGGCTTCTATCCTCTGATTGGCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000109965.8 ENSMUST00000185595.7 |
||
| CDS-3UTR CAA 90 bp | AGCCAATCAGAGGATAGAAGCCAAAAAGCAAATCAAACTTGGAAAGAAGCCCCACACGTTCCAAAAGCCTaGAAAGTTGAGGAAATTCAC | + |
|
Preference number: 5 (lower is better) Translates to: SQSEDRSQKANQTWKEAPHVPKA*KVEEIH Trigger: GTGAATTTCCTCAACTTTCAAGGCTTTTGGAACGTG...TGGGGCTTCTTTCCAAGTTTGATTTGCTTTTTGGCTTCTATCCTCTGATTGGCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000185595.7 |
||
| CDS-3UTR CAA 90 bp | GGTTTATCTACTGTTTGCTCCTACCTATTCATTTTGGGTGATGCAGATGGAGAATCTGTGAGATTGAACTaGAGACCTTCTAGAATCTCT | + |
|
Preference number: 5 (lower is better) Translates to: GLSTVCSYLFILGDADGESVRLN*RPSRIS Trigger: AGAGATTCTAGAAGGTCTCAAGTTCAATCTCACAGA...TTCTCCATCTGCATCACCCAAAATGAATAGGTAGGAGCAAACAGTAGATAAACC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000185595.7 |
||
| CDS GCA 90 bp | GTACAAGAATTCCCTGTCCACCTTAACAATTTTAGCCTTAATTTTTaGAGATTGGAAGTTATATCGGGCTATTGTGATGACATCTGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: VQEFPVHLNNFSLNF*RLEVISGYCDDICF Trigger: GAAGCAGATGTCATCACAATAGCCCGATATAACTTCCAATCTGCAAAAATTAAGGCTAAAATTGTTAAGGTGGACAGGGAATTCTTGTAC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000021496.8 ENSMUST00000109965.8 ENSMUST00000185595.7 |
||
| CDS CCA 90 bp | AATTCCCTGTCCACCTTAACAATTTTAGCCTTAATTTTTGCAGATTaGAAGTTATATCGGGCTATTGTGATGACATCTGCTTCTGTGTGT | + |
|
Preference number: 5 (lower is better) Translates to: NSLSTLTILALIFAD*KLYRAIVMTSASVC Trigger: ACACACAGAAGCAGATGTCATCACAATAGCCCGATATAACTTCCAATCTGCAAAAATTAAGGCTAAAATTGTTAAGGTGGACAGGGAATT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000021496.8 ENSMUST00000109965.8 ENSMUST00000185595.7 |
||
| CDS CAA 72 bp | CGAGGCAACTGGAAGTCTGCTGTGAAGGCCTCAGCCTaGTACAGAGCCCTTGCCTTCTCCTTGAACTCTGTC | + |
|
Preference number: 6 (lower is better) Translates to: RGNWKSAVKASA*YRALAFSLNSV Trigger: GACAGAGTTCAAGGAGAAGGCAAGGGCTCTGTACAAGGCTGAGGCCTTCACAGCAGACTTCCAGTTGCCTCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021496.8 ENSMUST00000185595.7 |
||
| CDS CAA 90 bp | CATCCTGGGCCTCAAAGATTTCCTCCATTTCCTCAGAGACTGGGGTaGCAAGCTATCTTCCACGTGCTGTATCCTGCCCTGGTCAGGGAG | + |
|
Preference number: 6 (lower is better) Translates to: HPGPQRFPPFPQRLG*QAIFHVLYPALVRE Trigger: CTCCCTGACCAGGGCAGGATACAGCACGTGGAAGATAGCTTGCAACCCCAGTCTCTGAGGAAATGGAGGAAATCTTTGAGGCCCAGGATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021496.8 ENSMUST00000109965.8 ENSMUST00000185595.7 |
||
| CDS GCA 72 bp | GTCTGCTGTGAAGGCCTCAGCCTTGTACAGAGCCCTTaGCTTCTCCTTGAACTCTGTCAAGATCTGCAGGTG | + |
|
Preference number: 6 (lower is better) Translates to: VCCEGLSLVQSP*LLLELCQDLQV Trigger: CACCTGCAGATCTTGACAGAGTTCAAGGAGAAGGCAAGGGCTCTGTACAAGGCTGAGGCCTTCACAGCAGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021496.8 ENSMUST00000185595.7 |
||
| CDS GCA 72 bp | TTCCTCAGAGACTGGGGTTGCAAGCTATCTTCCACGTaGTGTATCCTGCCCTGGTCAGGGAGGATAAACAGG | + |
|
Preference number: 6 (lower is better) Translates to: FLRDWGCKLSST*CILPWSGRINR Trigger: CCTGTTTATCCTCCCTGACCAGGGCAGGATACAGCACGTGGAAGATAGCTTGCAACCCCAGTCTCTGAGGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021496.8 ENSMUST00000109965.8 ENSMUST00000185595.7 |
||
| CDS CAA 72 bp | GTCTCTGTCTTTCTGGACTTCAGTGTGCCTTCCCAGTaGCCCATCTGCAGTTGCCCAGTAGGTGATAGCAGG | + |
|
Preference number: 6 (lower is better) Translates to: VSVFLDFSVPSQ*PICSCPVGDSR Trigger: CCTGCTATCACCTACTGGGCAACTGCAGATGGGCAACTGGGAAGGCACACTGAAGTCCAGAAAGACAGAGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021496.8 ENSMUST00000185595.7 |
||
| CDS CAA 90 bp | TCTGCTGTGAAGGCCTCAGCCTTGTACAGAGCCCTTGCCTTCTCCTaGAACTCTGTCAAGATCTGCAGGTGCTTATCAATAAACAGGGCG | + |
|
Preference number: 6 (lower is better) Translates to: SAVKASALYRALAFS*NSVKICRCLSINRA Trigger: CGCCCTGTTTATTGATAAGCACCTGCAGATCTTGACAGAGTTCAAGGAGAAGGCAAGGGCTCTGTACAAGGCTGAGGCCTTCACAGCAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021496.8 ENSMUST00000185595.7 |
||
| CDS CAA 90 bp | TCAGCTCCATCACAGTACTTTGCATCTCCTCGTCCCGGAAGTAGTTaGTGGTTAGCTCCTCGGTTTTCATCATGGGCACATTCACGGTCC | + |
|
Preference number: 6 (lower is better) Translates to: SAPSQYFASPRPGSS*WLAPRFSSWAHSRS Trigger: GGACCGTGAATGTGCCCATGATGAAAACCGAGGAGCTAACCACAAACTACTTCCGGGACGAGGAGATGCAAAGTACTGTGATGGAGCTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021496.8 ENSMUST00000109965.8 ENSMUST00000185595.7 |
||
| CDS GCA 72 bp | CTCAAAGATTTCCTCCATTTCCTCAGAGACTGGGGTTaGAAGCTATCTTCCACGTGCTGTATCCTGCCCTGG | + |
|
Preference number: 6 (lower is better) Translates to: LKDFLHFLRDWG*KLSSTCCILPW Trigger: CCAGGGCAGGATACAGCACGTGGAAGATAGCTTGCAACCCCAGTCTCTGAGGAAATGGAGGAAATCTTTGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021496.8 ENSMUST00000109965.8 ENSMUST00000185595.7 |
||
| CDS CCA 72 bp | CTGGGCCTCAAAGATTTCCTCCATTTCCTCAGAGACTaGGGTTGCAAGCTATCTTCCACGTGCTGTATCCTG | + |
|
Preference number: 6 (lower is better) Translates to: LGLKDFLHFLRD*GCKLSSTCCIL Trigger: CAGGATACAGCACGTGGAAGATAGCTTGCAACCCCAGTCTCTGAGGAAATGGAGGAAATCTTTGAGGCCCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021496.8 ENSMUST00000109965.8 ENSMUST00000185595.7 |
||
| CDS CAA 72 bp | CCTCAAAGATTTCCTCCATTTCCTCAGAGACTGGGGTaGCAAGCTATCTTCCACGTGCTGTATCCTGCCCTG | + |
|
Preference number: 6 (lower is better) Translates to: PQRFPPFPQRLG*QAIFHVLYPAL Trigger: CAGGGCAGGATACAGCACGTGGAAGATAGCTTGCAACCCCAGTCTCTGAGGAAATGGAGGAAATCTTTGAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021496.8 ENSMUST00000109965.8 ENSMUST00000185595.7 |
||
| CDS CAA 90 bp | TATTTCATGGTCTCTGTCTTTCTGGACTTCAGTGTGCCTTCCCAGTaGCCCATCTGCAGTTGCCCAGTAGGTGATAGCAGGACAGATTCC | + |
|
Preference number: 6 (lower is better) Translates to: YFMVSVFLDFSVPSQ*PICSCPVGDSRTDS Trigger: GGAATCTGTCCTGCTATCACCTACTGGGCAACTGCAGATGGGCAACTGGGAAGGCACACTGAAGTCCAGAAAGACAGAGACCATGAAATA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021496.8 ENSMUST00000185595.7 |
||
| CDS GCA 72 bp | AGAGCCCTTGCCTTCTCCTTGAACTCTGTCAAGATCTaGAGGTGCTTATCAATAAACAGGGCGTTGCCAGCA | + |
|
Preference number: 6 (lower is better) Translates to: RALAFSLNSVKI*RCLSINRALPA Trigger: TGCTGGCAACGCCCTGTTTATTGATAAGCACCTGCAGATCTTGACAGAGTTCAAGGAGAAGGCAAGGGCTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021496.8 ENSMUST00000185595.7 |
||
| CDS CCA 72 bp | AGGAGAACTTGGGCAGGGAGAGTTCATCTAGCATCCTaGGCCTCAAAGATTTCCTCCATTTCCTCAGAGACT | + |
|
Preference number: 6 (lower is better) Translates to: RRTWAGRVHLAS*ASKISSISSET Trigger: AGTCTCTGAGGAAATGGAGGAAATCTTTGAGGCCCAGGATGCTAGATGAACTCTCCCTGCCCAAGTTCTCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021496.8 ENSMUST00000109965.8 ENSMUST00000185595.7 |
||
| CDS TCA 72 bp | TGGATGTGTTCCTATGCAGGTCTGAGACCAGTTCCTTaGTCTTCCCCTGGGTCTGTTTCCTCACATAGTCAT | + |
|
Preference number: 6 (lower is better) Translates to: WMCSYAGLRPVP*SSPGSVSSHSH Trigger: ATGACTATGTGAGGAAACAGACCCAGGGGAAGATCAAGGAACTGGTCTCAGACCTGCATAGGAACACATCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021496.8 ENSMUST00000185595.7 |
||
| CDS CCA 72 bp | CAGTACTTTGCATCTCCTCGTCCCGGAAGTAGTTTGTaGTTAGCTCCTCGGTTTTCATCATGGGCACATTCA | + |
|
Preference number: 6 (lower is better) Translates to: QYFASPRPGSSL*LAPRFSSWAHS Trigger: TGAATGTGCCCATGATGAAAACCGAGGAGCTAACCACAAACTACTTCCGGGACGAGGAGATGCAAAGTACTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021496.8 ENSMUST00000109965.8 ENSMUST00000185595.7 |
||
| CDS CAA 72 bp | AAGGCCTCAGCCTTGTACAGAGCCCTTGCCTTCTCCTaGAACTCTGTCAAGATCTGCAGGTGCTTATCAATA | + |
|
Preference number: 6 (lower is better) Translates to: KASALYRALAFS*NSVKICRCLSI Trigger: TATTGATAAGCACCTGCAGATCTTGACAGAGTTCAAGGAGAAGGCAAGGGCTCTGTACAAGGCTGAGGCCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021496.8 ENSMUST00000185595.7 |
||
| CDS CAA 90 bp | GAAGGCAAAGTCAGTGTTGATGGAAGCCAGTGTGACACTGTCCAGTaGTATTTCATGGTCTCTGTCTTTCTGGACTTCAGTGTGCCTTCC | + |
|
Preference number: 6 (lower is better) Translates to: EGKVSVDGSQCDTVQ*YFMVSVFLDFSVPS Trigger: GGAAGGCACACTGAAGTCCAGAAAGACAGAGACCATGAAATACAACTGGACAGTGTCACACTGGCTTCCATCAACACTGACTTTGCCTTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021496.8 ENSMUST00000185595.7 |
||
| CDS CCA 72 bp | TGTCATTTAGGTTGTAGTCTTGTGATAAGGAGAACTTaGGCAGGGAGAGTTCATCTAGCATCCTGGGCCTCA | + |
|
Preference number: 6 (lower is better) Translates to: CHLGCSLVIRRT*AGRVHLASWAS Trigger: TGAGGCCCAGGATGCTAGATGAACTCTCCCTGCCCAAGTTCTCCTTATCACAAGACTACAACCTAAATGACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021496.8 ENSMUST00000109965.8 ENSMUST00000185595.7 |
||
| CDS CAA 72 bp | GTCAGTGTTGATGGAAGCCAGTGTGACACTGTCCAGTaGTATTTCATGGTCTCTGTCTTTCTGGACTTCAGT | + |
|
Preference number: 6 (lower is better) Translates to: VSVDGSQCDTVQ*YFMVSVFLDFS Trigger: ACTGAAGTCCAGAAAGACAGAGACCATGAAATACAACTGGACAGTGTCACACTGGCTTCCATCAACACTGAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021496.8 ENSMUST00000185595.7 |
||
| CDS TCA 72 bp | GTGTCTTCAGGGTCAAAAGTCACGTTCCAAAAGCCTTaGAAGTTGAGGAAATTCACTAGTGCCATGGATGTG | + |
|
Preference number: 6 (lower is better) Translates to: VSSGSKVTFQKP*KLRKFTSAMDV Trigger: CACATCCATGGCACTAGTGAATTTCCTCAACTTTCAAGGCTTTTGGAACGTGACTTTTGACCCTGAAGACAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021496.8 ENSMUST00000185595.7 |
||
| CDS TCA 72 bp | CAGGGTCAAAAGTCACGTTCCAAAAGCCTTGAAAGTTaGGGAAATTCACTAGTGCCATGGATGTGTTCCTAT | + |
|
Preference number: 6 (lower is better) Translates to: QGQKSRSKSLES*GNSLVPWMCSY Trigger: ATAGGAACACATCCATGGCACTAGTGAATTTCCTCAACTTTCAAGGCTTTTGGAACGTGACTTTTGACCCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021496.8 ENSMUST00000185595.7 |
||
| CDS GCA 72 bp | TTCCCTGTCCACCTTAACAATTTTAGCCTTAATTTTTaGAGATTGGAAGTTATATCGGGCTATTGTGATGAC | + |
|
Preference number: 6 (lower is better) Translates to: FPVHLNNFSLNF*RLEVISGYCDD Trigger: GTCATCACAATAGCCCGATATAACTTCCAATCTGCAAAAATTAAGGCTAAAATTGTTAAGGTGGACAGGGAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000021496.8 ENSMUST00000109965.8 ENSMUST00000185595.7 |
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