Pregenerated sensors for SERPINA1F (Mus musculus)
Ensembl gene IDs: ENSMUSG00000021081Ensembl transcript IDs: ENSMUST00000021490.12, ENSMUST00000117053.8, ENSMUST00000118101.2
Found 148 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CTCCCCTCCCTCTCCCACCACCAGGGGAGCAGCAGATGGTGGCTTTaGGTACAGACAAAGGCAACATATCCCAGCCTCTGTGTCACCAAG | + |
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Preference number: 1 (lower is better) Translates to: LPSLSHHQGSSRWWL*VQTKATYPSLCVTK Trigger: CTTGGTGACACAGAGGCTGGGATATGTTGCCTTTGTCTGTACCCAAAGCCACCATCTGCTGCTCCCCTGGTGGTGGGAGAGGGAGGGGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117053.8 |
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| 3UTR GCA 90 bp | GCAGTTAGCAAGGCTGAGGGTGAAGAGATGCAGGAAACCTGCCTCTaGACTCTCCCACCACTCCAATCCCCTCCCCCTTCTCCCAGCATA | + |
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Preference number: 1 (lower is better) Translates to: AVSKAEGEEMQETCL*TLPPLQSPPPSPSI Trigger: TATGCTGGGAGAAGGGGGAGGGGATTGGAGTGGTGGGAGAGTGCAGAGGCAGGTTTCCTGCATCTCTTCACCCTCAGCCTTGCTAACTGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000117053.8 |
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| 3UTR CCA 90 bp | GACACAGTACAACCAGAAGGGGACATGGCCCTCTGCCTTCAGTGCTaGAGCTGGGACATCATGGGGACCTCCTCAACACAGATGCAGGAG | + |
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Preference number: 1 (lower is better) Translates to: DTVQPEGDMALCLQC*SWDIMGTSSTQMQE Trigger: CTCCTGCATCTGTGTTGAGGAGGTCCCCATGATGTCCCAGCTCCAGCACTGAAGGCAGAGGGCCATGTCCCCTTCTGGTTGTACTGTGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117053.8 |
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| 3UTR CCA 90 bp | TCAACACTCCCCTCCCTCTCCCACCACCAGGGGAGCAGCAGATGGTaGCTTTGGGTACAGACAAAGGCAACATATCCCAGCCTCTGTGTC | + |
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Preference number: 1 (lower is better) Translates to: STLPSLSHHQGSSRW*LWVQTKATYPSLCV Trigger: GACACAGAGGCTGGGATATGTTGCCTTTGTCTGTACCCAAAGCCACCATCTGCTGCTCCCCTGGTGGTGGGAGAGGGAGGGGAGTGTTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117053.8 |
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| 3UTR CCA 90 bp | GCACTCCCACAGTACACAAGTGTTCTGAGCAGTAGGTGCATTTCCTaGGAAGGGGATTCTGTCTGCTGCAGGCAGTTAGCAAGGCTGAGG | + |
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Preference number: 1 (lower is better) Translates to: ALPQYTSVLSSRCIS*EGDSVCCRQLARLR Trigger: CCTCAGCCTTGCTAACTGCCTGCAGCAGACAGAATCCCCTTCCCAGGAAATGCACCTACTGCTCAGAACACTTGTGTACTGTGGGAGTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117053.8 |
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| 3UTR TCA 90 bp | GCCATTCTCAGGAAAATTGTGGTGAGATGGAGAGGCCAGACCCAGTaGGATGACACAGTACAACCAGAAGGGGACATGGCCCTCTGCCTT | + |
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Preference number: 1 (lower is better) Translates to: AILRKIVVRWRGQTQ*DDTVQPEGDMALCL Trigger: AAGGCAGAGGGCCATGTCCCCTTCTGGTTGTACTGTGTCATCTCACTGGGTCTGGCCTCTCCATCTCACCACAATTTTCCTGAGAATGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117053.8 |
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| 3UTR TCA 90 bp | TCTGATCATTGGAGGATTTGTGAGTCCCTTCTAGCAGGGAACGAATaGCAGCAACAGGCTGGGGTCCTGCTCCAGTCCTGTGGAGGAAGA | + |
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Preference number: 1 (lower is better) Translates to: SDHWRICESLLAGNE*QQQAGVLLQSCGGR Trigger: TCTTCCTCCACAGGACTGGAGCAGGACCCCAGCCTGTTGCTGTCATTCGTTCCCTGCTAGAAGGGACTCACAAATCCTCCAATGATCAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117053.8 |
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| 3UTR GCA 90 bp | CCTCAGGGGACAGAGGAAGACACAGACACCACAAGGAGAGGGATTTaGTGTTTGCACTCAGGCATGGGTGAAACGGCCCCATGTTTAATG | + |
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Preference number: 1 (lower is better) Translates to: PQGTEEDTDTTRRGI*CLHSGMGETAPCLM Trigger: CATTAAACATGGGGCCGTTTCACCCATGCCTGAGTGCAAACAGCAAATCCCTCTCCTTGTGGTGTCTGTGTCTTCCTCTGTCCCCTGAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117053.8 |
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| 3UTR GCA 90 bp | AAGCAGGCAGCACTCCCACAGTACACAAGTGTTCTGAGCAGTAGGTaGATTTCCTGGGAAGGGGATTCTGTCTGCTGCAGGCAGTTAGCA | + |
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Preference number: 1 (lower is better) Translates to: KQAALPQYTSVLSSR*ISWEGDSVCCRQLA Trigger: TGCTAACTGCCTGCAGCAGACAGAATCCCCTTCCCAGGAAATGCACCTACTGCTCAGAACACTTGTGTACTGTGGGAGTGCTGCCTGCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117053.8 |
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| 3UTR CCA 90 bp | GATGCCTCCAGCCTTTCAGAAAGGGCAAACAGAGAGGGCCCAGCCTaGCTCCACAATATTGCAATTCCCCTTCTCCTGGTAGTTCTCTCT | + |
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Preference number: 1 (lower is better) Translates to: DASSLSERANREGPA*LHNIAIPLLLVVLS Trigger: AGAGAGAACTACCAGGAGAAGGGGAATTGCAATATTGTGGAGCCAGGCTGGGCCCTCTCTGTTTGCCCTTTCTGAAAGGCTGGAGGCATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117053.8 |
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| 3UTR TCA 90 bp | AGACACCACAAGGAGAGGGATTTGCTGTTTGCACTCAGGCATGGGTaGAACGGCCCCATGTTTAATGTTACCCAGAAGGGGACATGGCTT | + |
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Preference number: 1 (lower is better) Translates to: RHHKERDLLFALRHG*NGPMFNVTQKGTWL Trigger: AAGCCATGTCCCCTTCTGGGTAACATTAAACATGGGGCCGTTTCACCCATGCCTGAGTGCAAACAGCAAATCCCTCTCCTTGTGGTGTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117053.8 |
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| 3UTR TCA 90 bp | AATACTATGTTGAGGGCCTGGAGATGGGGTAGGTGCAGTTGTATATaGCTTCAGGAAGATCTCAGGGGGACCCTAGCGAAAGGAAAGGTG | + |
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Preference number: 1 (lower is better) Translates to: NTMLRAWRWGRCSCI*LQEDLRGTLAKGKV Trigger: CACCTTTCCTTTCGCTAGGGTCCCCCTGAGATCTTCCTGAAGTCATATACAACTGCACCTACCCCATCTCCAGGCCCTCAACATAGTATT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000117053.8 |
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| 3UTR CCA 90 bp | GCCTCTGTGTCACCAAGGCTGGCACTCTCCTTGATAACATTTCTCTaGTGCAGATGGCTCCTGTCCTTGAGAGAAATAAGGATCAAACAT | + |
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Preference number: 1 (lower is better) Translates to: ASVSPRLALSLITFL*CRWLLSLREIRIKH Trigger: ATGTTTGATCCTTATTTCTCTCAAGGACAGGAGCCATCTGCACCAGAGAAATGTTATCAAGGAGAGTGCCAGCCTTGGTGACACAGAGGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117053.8 |
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| 3UTR GCA 90 bp | TCTGTGTCACCAAGGCTGGCACTCTCCTTGATAACATTTCTCTGGTaGAGATGGCTCCTGTCCTTGAGAGAAATAAGGATCAAACATCCT | + |
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Preference number: 1 (lower is better) Translates to: SVSPRLALSLITFLW*RWLLSLREIRIKHP Trigger: AGGATGTTTGATCCTTATTTCTCTCAAGGACAGGAGCCATCTGCACCAGAGAAATGTTATCAAGGAGAGTGCCAGCCTTGGTGACACAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117053.8 |
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| 3UTR CAA 90 bp | ACTCCCCTCCCTCTCCCACCACCAGGGGAGCAGCAGATGGTGGCTTaGGGTACAGACAAAGGCAACATATCCCAGCCTCTGTGTCACCAA | + |
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Preference number: 2 (lower is better) Translates to: TPLPLPPPGEQQMVA*GTDKGNISQPLCHQ Trigger: TTGGTGACACAGAGGCTGGGATATGTTGCCTTTGTCTGTACCCAAAGCCACCATCTGCTGCTCCCCTGGTGGTGGGAGAGGGAGGGGAGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117053.8 |
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| 3UTR-3UTR CCA 90 bp | CAGGGAACGAATGACAGCAACAGGCTGGGGTCCTGCTCCAGTCCTGTGGAGGAAACCCAGAAGGGGACATaGCTTTCAGGAGAGAGGCTG | + |
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Preference number: 2 (lower is better) Translates to: QGTNDSNRLGSCSSPVEETQKGT*LSGERL Trigger: CAGCCTCTCTCCTGAAAGCCATGTCCCCTTCTGGGT...TTCCTCCACAGGACTGGAGCAGGACCCCAGCCTGTTGCTGTCATTCGTTCCCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117053.8 |
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| 3UTR-3UTR GCA 90 bp | CCTTCTCCTGGTAGTTCTCTCTTCTCCCTAATGACCCTTTCAACACTCCCCTCCGCCCTCTGCCTTCAGTaGTGGAGCTGGGACATCATG | + |
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Preference number: 2 (lower is better) Translates to: PSPGSSLFSLMTLSTLPSALCLQ*WSWDIM Trigger: CATGATGTCCCAGCTCCAGCACTGAAGGCAGAGGGC...GGAGGGGAGTGTTGAAAGGGTCATTAGGGAGAAGAGAGAACTACCAGGAGAAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117053.8 |
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| 3UTR-3UTR GCA 90 bp | CTGCAGATGAAGCAGGCAGCACTCCCACAGTACACAAGTGTTCTGAGCAGTAGGCTGAGGGTGAAGAGATaGAGGAAACCTGCCTCTGCA | + |
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Preference number: 2 (lower is better) Translates to: LQMKQAALPQYTSVLSSRLRVKR*RKPASA Trigger: TGCAGAGGCAGGTTTCCTGCATCTCTTCACCCTCAG...CCTACTGCTCAGAACACTTGTGTACTGTGGGAGTGCTGCCTGCTTCATCTGCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117053.8 |
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| 3UTR-3UTR GCA 90 bp | GGAGCAGCAGATGGTGGCTTTGGGTACAGACAAAGGCAACATATCCCAGCCTCTACAAGGAGAGGGATTTaGTGTTTGCACTCAGGCATG | + |
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Preference number: 2 (lower is better) Translates to: GAADGGFGYRQRQHIPASTRRGI*CLHSGM Trigger: CATGCCTGAGTGCAAACAGCAAATCCCTCTCCTTGT...AGAGGCTGGGATATGTTGCCTTTGTCTGTACCCAAAGCCACCATCTGCTGCTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117053.8 |
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| 3UTR-3UTR CCA 90 bp | TTGGGCCATGAGAGAAGGGCAATTAAGTGTCCCCAGACAGCCCTGGCCAGTTTGGACCTCTCTGATCATTaGAGGATTTGTGAGTCCCTT | + |
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Preference number: 2 (lower is better) Translates to: LGHERRAIKCPQTALASLDLSDH*RICESL Trigger: AAGGGACTCACAAATCCTCCAATGATCAGAGAGGTC...CAAACTGGCCAGGGCTGTCTGGGGACACTTAATTGCCCTTCTCTCATGGCCCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117053.8 |
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| 3UTR-3UTR TCA 90 bp | GGCCCAGCCTGGCTCCACAATATTGCAATTCCCCTTCTCCTGGTAGTTCTCTCTTCAGGTTTGAAAGAATaGCTTCCTCTTGTCACCTCC | + |
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Preference number: 2 (lower is better) Translates to: GPAWLHNIAIPLLLVVLSSGLKE*LPLVTS Trigger: GGAGGTGACAAGAGGAAGTCATTCTTTCAAACCTGA...AGAGAGAACTACCAGGAGAAGGGGAATTGCAATATTGTGGAGCCAGGCTGGGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117053.8 |
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| 3UTR-3UTR TCA 90 bp | TTAAGTGTCCCCAGACAGCCCTGGCCAGTTTGTAAAAACACACTAGTTCCTGATTCAGGAAAATTGTGGTaGGATGGAGAGGCCAGACCC | + |
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Preference number: 2 (lower is better) Translates to: LSVPRQPWPVCKNTLVPDSGKLW*DGEARP Trigger: GGGTCTGGCCTCTCCATCTCACCACAATTTTCCTGA...ATCAGGAACTAGTGTGTTTTTACAAACTGGCCAGGGCTGTCTGGGGACACTTAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000117053.8 |
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| 3UTR CCA 72 bp | GAAGGGGACATGGCCCTCTGCCTTCAGTGCTGGAGCTaGGACATCATGGGGACCTCCTCAACACAGATGCAG | + |
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Preference number: 3 (lower is better) Translates to: EGDMALCLQCWS*DIMGTSSTQMQ Trigger: CTGCATCTGTGTTGAGGAGGTCCCCATGATGTCCCAGCTCCAGCACTGAAGGCAGAGGGCCATGTCCCCTTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117053.8 |
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| 3UTR CCA 72 bp | CAACCAGAAGGGGACATGGCCCTCTGCCTTCAGTGCTaGAGCTGGGACATCATGGGGACCTCCTCAACACAG | + |
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Preference number: 3 (lower is better) Translates to: QPEGDMALCLQC*SWDIMGTSSTQ Trigger: CTGTGTTGAGGAGGTCCCCATGATGTCCCAGCTCCAGCACTGAAGGCAGAGGGCCATGTCCCCTTCTGGTTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117053.8 |
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| 3UTR GCA 72 bp | GTACAACCAGAAGGGGACATGGCCCTCTGCCTTCAGTaGTGGAGCTGGGACATCATGGGGACCTCCTCAACA | + |
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Preference number: 3 (lower is better) Translates to: VQPEGDMALCLQ*WSWDIMGTSST Trigger: TGTTGAGGAGGTCCCCATGATGTCCCAGCTCCAGCACTGAAGGCAGAGGGCCATGTCCCCTTCTGGTTGTAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117053.8 |
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| 3UTR GCA 72 bp | GATGACACAGTACAACCAGAAGGGGACATGGCCCTCTaGCTTCAGTGCTGGAGCTGGGACATCATGGGGACC | + |
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Preference number: 3 (lower is better) Translates to: DDTVQPEGDMAL*LQCWSWDIMGT Trigger: GGTCCCCATGATGTCCCAGCTCCAGCACTGAAGGCAGAGGGCCATGTCCCCTTCTGGTTGTACTGTGTCATC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117053.8 |
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| 3UTR GCA 72 bp | GTTAGCAAGGCTGAGGGTGAAGAGATGCAGGAAACCTaGCTCTGCACTCTCCCACCACTCCAATCCCCTCCC | + |
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Preference number: 3 (lower is better) Translates to: VSKAEGEEMQET*LCTLPPLQSPP Trigger: GGGAGGGGATTGGAGTGGTGGGAGAGTGCAGAGGCAGGTTTCCTGCATCTCTTCACCCTCAGCCTTGCTAAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117053.8 |
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| 3UTR CCA 72 bp | TGGCCCTCTGCCTTCAGTGCTGGAGCTGGGACATCATaGGGACCTCCTCAACACAGATGCAGGAGACAGTGT | + |
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Preference number: 3 (lower is better) Translates to: WPSAFSAGAGTS*GPPQHRCRRQC Trigger: ACACTGTCTCCTGCATCTGTGTTGAGGAGGTCCCCATGATGTCCCAGCTCCAGCACTGAAGGCAGAGGGCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117053.8 |
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| 3UTR TCA 72 bp | GTCAGCCAGGACAAAGTGGCTTTGTGTCTAGTGGCCTaGTTGGCAGGAGAAGCCCGAGGGGAATCACCCAGA | + |
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Preference number: 3 (lower is better) Translates to: VSQDKVALCLVA*LAGEARGESPR Trigger: TCTGGGTGATTCCCCTCGGGCTTCTCCTGCCAATCAGGCCACTAGACACAAAGCCACTTTGTCCTGGCTGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117053.8 |
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| 3UTR CCA 72 bp | CCCAGTGAGATGACACAGTACAACCAGAAGGGGACATaGCCCTCTGCCTTCAGTGCTGGAGCTGGGACATCA | + |
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Preference number: 3 (lower is better) Translates to: PSEMTQYNQKGT*PSAFSAGAGTS Trigger: TGATGTCCCAGCTCCAGCACTGAAGGCAGAGGGCCATGTCCCCTTCTGGTTGTACTGTGTCATCTCACTGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117053.8 |
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| 3UTR CCA 72 bp | CTCTCCCACCACCAGGGGAGCAGCAGATGGTGGCTTTaGGTACAGACAAAGGCAACATATCCCAGCCTCTGT | + |
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Preference number: 3 (lower is better) Translates to: LSHHQGSSRWWL*VQTKATYPSLC Trigger: ACAGAGGCTGGGATATGTTGCCTTTGTCTGTACCCAAAGCCACCATCTGCTGCTCCCCTGGTGGTGGGAGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117053.8 |
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| 3UTR-3UTR CAA 90 bp | CCTTCTCCTGGTAGTTCTCTCTTCTCCCTAATGACCCTTTCAACACTCCCCTCCATAAGTGCCCCACCCTaGGGCCATGAGAGAAGGGCA | + |
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Preference number: 3 (lower is better) Translates to: PSPGSSLFSLMTLSTLPSISAPP*GHERRA Trigger: TGCCCTTCTCTCATGGCCCAAGGGTGGGGCACTTAT...GGAGGGGAGTGTTGAAAGGGTCATTAGGGAGAAGAGAGAACTACCAGGAGAAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117053.8 |
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| 3UTR TCA 72 bp | AGGGAGTTAGGGTTGGGGTGGGGTATGATCTGCAGATaGAGCAGGCAGCACTCCCACAGTACACAAGTGTTC | + |
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Preference number: 3 (lower is better) Translates to: RELGLGWGMICR*SRQHSHSTQVF Trigger: GAACACTTGTGTACTGTGGGAGTGCTGCCTGCTTCATCTGCAGATCATACCCCACCCCAACCCTAACTCCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117053.8 |
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| 3UTR GCA 72 bp | CTGGGCATAACAAGGGTTGAGGAGGATGGGGTAGACTaGCTGGCCCCGATGACAATGATGAATCCTGAGATC | + |
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Preference number: 3 (lower is better) Translates to: LGITRVEEDGVD*LAPMTMMNPEI Trigger: GATCTCAGGATTCATCATTGTCATCGGGGCCAGGCAGTCTACCCCATCCTCCTCAACCCTTGTTATGCCCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117053.8 |
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| 3UTR GCA 72 bp | AGTAGGTGCATTTCCTGGGAAGGGGATTCTGTCTGCTaGAGGCAGTTAGCAAGGCTGAGGGTGAAGAGATGC | + |
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Preference number: 3 (lower is better) Translates to: SRCISWEGDSVC*RQLARLRVKRC Trigger: GCATCTCTTCACCCTCAGCCTTGCTAACTGCCTGCAGCAGACAGAATCCCCTTCCCAGGAAATGCACCTACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117053.8 |
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| 3UTR GCA 72 bp | GCACTCCCACAGTACACAAGTGTTCTGAGCAGTAGGTaGATTTCCTGGGAAGGGGATTCTGTCTGCTGCAGG | + |
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Preference number: 3 (lower is better) Translates to: ALPQYTSVLSSR*ISWEGDSVCCR Trigger: CCTGCAGCAGACAGAATCCCCTTCCCAGGAAATGCACCTACTGCTCAGAACACTTGTGTACTGTGGGAGTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117053.8 |
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| 3UTR CCA 72 bp | GCCCGAGGGGAATCACCCAGAGACCTCTCTGATCATTaGAGGATTTGTGAGTCCCTTCTAGCAGGGAACGAA | + |
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Preference number: 3 (lower is better) Translates to: ARGESPRDLSDH*RICESLLAGNE Trigger: TTCGTTCCCTGCTAGAAGGGACTCACAAATCCTCCAATGATCAGAGAGGTCTCTGGGTGATTCCCCTCGGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117053.8 |
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| 3UTR TCA 72 bp | AGGAAAATTGTGGTGAGATGGAGAGGCCAGACCCAGTaGGATGACACAGTACAACCAGAAGGGGACATGGCC | + |
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Preference number: 3 (lower is better) Translates to: RKIVVRWRGQTQ*DDTVQPEGDMA Trigger: GGCCATGTCCCCTTCTGGTTGTACTGTGTCATCTCACTGGGTCTGGCCTCTCCATCTCACCACAATTTTCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117053.8 |
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| 3UTR TCA 72 bp | TTGAGGGCCTGGAGATGGGGTAGGTGCAGTTGTATATaGCTTCAGGAAGATCTCAGGGGGACCCTAGCGAAA | + |
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Preference number: 3 (lower is better) Translates to: LRAWRWGRCSCI*LQEDLRGTLAK Trigger: TTTCGCTAGGGTCCCCCTGAGATCTTCCTGAAGTCATATACAACTGCACCTACCCCATCTCCAGGCCCTCAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000117053.8 |
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| 3UTR-3UTR CAA 90 bp | CCTTCTCCTGGTAGTTCTCTCTTCTCCCTAATGACCCTTTCAACACTCCCCTCCAGGCTGGCACTCTCCTaGATAACATTTCTCTGGTGC | + |
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Preference number: 3 (lower is better) Translates to: PSPGSSLFSLMTLSTLPSRLALS*ITFLWC Trigger: GCACCAGAGAAATGTTATCAAGGAGAGTGCCAGCCT...GGAGGGGAGTGTTGAAAGGGTCATTAGGGAGAAGAGAGAACTACCAGGAGAAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117053.8 |
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| 3UTR TCA 72 bp | AAGGAGAGGGATTTGCTGTTTGCACTCAGGCATGGGTaGAACGGCCCCATGTTTAATGTTACCCAGAAGGGG | + |
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Preference number: 3 (lower is better) Translates to: KERDLLFALRHG*NGPMFNVTQKG Trigger: CCCCTTCTGGGTAACATTAAACATGGGGCCGTTTCACCCATGCCTGAGTGCAAACAGCAAATCCCTCTCCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117053.8 |
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| 3UTR CCA 72 bp | TCACCAAGGCTGGCACTCTCCTTGATAACATTTCTCTaGTGCAGATGGCTCCTGTCCTTGAGAGAAATAAGG | + |
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Preference number: 3 (lower is better) Translates to: SPRLALSLITFL*CRWLLSLREIR Trigger: CCTTATTTCTCTCAAGGACAGGAGCCATCTGCACCAGAGAAATGTTATCAAGGAGAGTGCCAGCCTTGGTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117053.8 |
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| 3UTR CCA 72 bp | GGAAAGGTGTCCTTCTCATGTAGGTACCTATCCTTATaGCTTTTCAGAGCCACTCATACAGCATGGCTTCAC | + |
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Preference number: 3 (lower is better) Translates to: GKVSFSCRYLSL*LFRATHTAWLH Trigger: GTGAAGCCATGCTGTATGAGTGGCTCTGAAAAGCCATAAGGATAGGTACCTACATGAGAAGGACACCTTTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117053.8 |
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| 3UTR TCA 72 bp | GGCACTGGATTTATATTTATCCCTGGAATACTATGTTaGGGGCCTGGAGATGGGGTAGGTGCAGTTGTATAT | + |
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Preference number: 3 (lower is better) Translates to: GTGFIFIPGILC*GPGDGVGAVVY Trigger: ATATACAACTGCACCTACCCCATCTCCAGGCCCTCAACATAGTATTCCAGGGATAAATATAAATCCAGTGCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117053.8 |
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| 3UTR TCA 72 bp | CATCCCGTTCCTAACCTGTGCAGTGGGAAAGGTTTTTaGTCCTTGTATGACTCGAATAAAGGCTCTTCAGTT | + |
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Preference number: 3 (lower is better) Translates to: HPVPNLCSGKGF*SLYDSNKGSSV Trigger: AACTGAAGAGCCTTTATTCGAGTCATACAAGGATCAAAAACCTTTCCCACTGCACAGGTTAGGAACGGGATG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000117053.8 |
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| 3UTR CCA 72 bp | AGATCTACTATGAGGCACTGGATTTATATTTATCCCTaGAATACTATGTTGAGGGCCTGGAGATGGGGTAGG | + |
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Preference number: 3 (lower is better) Translates to: RSTMRHWIYIYP*NTMLRAWRWGR Trigger: CCTACCCCATCTCCAGGCCCTCAACATAGTATTCCAGGGATAAATATAAATCCAGTGCCTCATAGTAGATCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117053.8 |
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| 3UTR CCA 72 bp | CTGGCACTCTCCTTGATAACATTTCTCTGGTGCAGATaGCTCCTGTCCTTGAGAGAAATAAGGATCAAACAT | + |
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Preference number: 3 (lower is better) Translates to: LALSLITFLWCR*LLSLREIRIKH Trigger: ATGTTTGATCCTTATTTCTCTCAAGGACAGGAGCCATCTGCACCAGAGAAATGTTATCAAGGAGAGTGCCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117053.8 |
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| 3UTR CAA 72 bp | CCTCTCCCACCACCAGGGGAGCAGCAGATGGTGGCTTaGGGTACAGACAAAGGCAACATATCCCAGCCTCTG | + |
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Preference number: 4 (lower is better) Translates to: PLPPPGEQQMVA*GTDKGNISQPL Trigger: CAGAGGCTGGGATATGTTGCCTTTGTCTGTACCCAAAGCCACCATCTGCTGCTCCCCTGGTGGTGGGAGAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117053.8 |
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| CDS-3UTR CCA 90 bp | CAGGGAACGAATGACAGCAACAGGCTGGGGTCCTGCTCCAGTCCTGTGGAGGAAGATGGCTCTTCAGTCTaGTGGATGGAATGGAGCAGA | + |
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Preference number: 4 (lower is better) Translates to: QGTNDSNRLGSCSSPVEEDGSSV*WMEWSR Trigger: TCTGCTCCATTCCATCCACCAGACTGAAGAGCCATC...TTCCTCCACAGGACTGGAGCAGGACCCCAGCCTGTTGCTGTCATTCGTTCCCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117053.8 |
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| CDS-3UTR TCA 90 bp | CAACCAGAAGGGGACATGGCCCTCTGCCTTCAGTGCTGGAGCTGGGACATCATGATCTGTGTCTTGGCCTaGCTGCTGTCTGTAAAGTTG | + |
|
Preference number: 4 (lower is better) Translates to: QPEGDMALCLQCWSWDIMICVLA*LLSVKL Trigger: CAACTTTACAGACAGCAGTCAGGCCAAGACACAGAT...CATGATGTCCCAGCTCCAGCACTGAAGGCAGAGGGCCATGTCCCCTTCTGGTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117053.8 |
||
| CDS-3UTR CCA 90 bp | TCAGGCATGGGTGAAACGGCCCCATGTTTAATGTTACCCAGAAGGGGACATGGCAGCAGGAGGAGTCCATaGGAGGAAAAGGGTGTTGTC | + |
|
Preference number: 4 (lower is better) Translates to: SGMGETAPCLMLPRRGHGSRRSP*EEKGVV Trigger: GACAACACCCTTTTCCTCCCATGGACTCCTCCTGCT...GCCATGTCCCCTTCTGGGTAACATTAAACATGGGGCCGTTTCACCCATGCCTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000021490.12 ENSMUST00000117053.8 ENSMUST00000118101.2 |
||
| CDS-3UTR TCA 90 bp | TCAGGCATGGGTGAAACGGCCCCATGTTTAATGTTACCCAGAAGGGGACATGGCTCCCAGGGACAGCATTaGAATGGCAGCAATGACTCT | + |
|
Preference number: 4 (lower is better) Translates to: SGMGETAPCLMLPRRGHGSQGQH*NGSNDS Trigger: AGAGTCATTGCTGCCATTTCAATGCTGTCCCTGGGA...GCCATGTCCCCTTCTGGGTAACATTAAACATGGGGCCGTTTCACCCATGCCTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021490.12 ENSMUST00000117053.8 ENSMUST00000118101.2 |
||
| CDS-3UTR TCA 90 bp | CTGCAGATGAAGCAGGCAGCACTCCCACAGTACACAAGTGTTCTGAGCAGTAGGTCCCAGGGACAGCATTaGAATGGCAGCAATGACTCT | + |
|
Preference number: 4 (lower is better) Translates to: LQMKQAALPQYTSVLSSRSQGQH*NGSNDS Trigger: AGAGTCATTGCTGCCATTTCAATGCTGTCCCTGGGA...CCTACTGCTCAGAACACTTGTGTACTGTGGGAGTGCTGCCTGCTTCATCTGCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117053.8 |
||
| CDS-3UTR GCA 90 bp | ACGGCCCCATGTTTAATGTTACCCAGAAGGGGACATGGCTTTCAGGAGAGAGGCACCGGCAGCCAAAGTTaGTGTCAAGTTTGGCATTCC | + |
|
Preference number: 4 (lower is better) Translates to: TAPCLMLPRRGHGFQERGTGSQS*CQVWHS Trigger: GGAATGCCAAACTTGACAGCAACTTTGGCTGCCGGT...GCCTCTCTCCTGAAAGCCATGTCCCCTTCTGGGTAACATTAAACATGGGGCCGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021490.12 ENSMUST00000118101.2 |
||
| CDS-3UTR CCA 90 bp | GCCTGGCTCCACAATATTGCAATTCCCCTTCTCCTGGTAGTTCTCTCTTCTCCCAGCAGGAGGAGTCCATaGGAGGAAAAGGGTGTTGTC | + |
|
Preference number: 4 (lower is better) Translates to: AWLHNIAIPLLLVVLSSPSRRSP*EEKGVV Trigger: GACAACACCCTTTTCCTCCCATGGACTCCTCCTGCT...GGGAGAAGAGAGAACTACCAGGAGAAGGGGAATTGCAATATTGTGGAGCCAGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117053.8 |
||
| CDS-3UTR CCA 90 bp | GGTGAAACGGCCCCATGTTTAATGTTACCCAGAAGGGGACATGGCTTTCAGGAGAGCAGGAGGAGTCCATaGGAGGAAAAGGGTGTTGTC | + |
|
Preference number: 4 (lower is better) Translates to: GETAPCLMLPRRGHGFQESRRSP*EEKGVV Trigger: GACAACACCCTTTTCCTCCCATGGACTCCTCCTGCT...CTCCTGAAAGCCATGTCCCCTTCTGGGTAACATTAAACATGGGGCCGTTTCACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000021490.12 ENSMUST00000117053.8 ENSMUST00000118101.2 |
||
| CDS-3UTR CCA 90 bp | ACGGCCCCATGTTTAATGTTACCCAGAAGGGGACATGGCTTTCAGGAGAGAGGCGGCTCTTCAGTCTGGTaGATGGAATGGAGCAGATAC | + |
|
Preference number: 4 (lower is better) Translates to: TAPCLMLPRRGHGFQERGGSSVW*MEWSRY Trigger: GTATCTGCTCCATTCCATCCACCAGACTGAAGAGCC...GCCTCTCTCCTGAAAGCCATGTCCCCTTCTGGGTAACATTAAACATGGGGCCGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021490.12 ENSMUST00000117053.8 ENSMUST00000118101.2 |
||
| CDS-3UTR TCA 90 bp | ACGGCCCCATGTTTAATGTTACCCAGAAGGGGACATGGCTTTCAGGAGAGAGGCGGGACATCATTTGTGTaGTCCTGGATGAAGATGAGG | + |
|
Preference number: 4 (lower is better) Translates to: TAPCLMLPRRGHGFQERGGTSFV*SWMKMR Trigger: CCTCATCTTCATCCAGGATCACACAAATGATGTCCC...GCCTCTCTCCTGAAAGCCATGTCCCCTTCTGGGTAACATTAAACATGGGGCCGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021490.12 ENSMUST00000117053.8 ENSMUST00000118101.2 |
||
| CDS-3UTR TCA 90 bp | GGAGCAGCAGATGGTGGCTTTGGGTACAGACAAAGGCAACATATCCCAGCCTCTGGGACATCATTTGTGTaGTCCTGGATGAAGATGAGG | + |
|
Preference number: 4 (lower is better) Translates to: GAADGGFGYRQRQHIPASGTSFV*SWMKMR Trigger: CCTCATCTTCATCCAGGATCACACAAATGATGTCCC...AGAGGCTGGGATATGTTGCCTTTGTCTGTACCCAAAGCCACCATCTGCTGCTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117053.8 |
||
| CDS-3UTR CCA 90 bp | ACGGCCCCATGTTTAATGTTACCCAGAAGGGGACATGGCTTTCAGGAGAGAGGCTACCAGAAACACTTGTaGATCTCCGCTTCAGGCAAG | + |
|
Preference number: 4 (lower is better) Translates to: TAPCLMLPRRGHGFQERGYQKHL*ISASGK Trigger: CTTGCCTGAAGCGGAGATCCACAAGTGTTTCTGGTA...GCCTCTCTCCTGAAAGCCATGTCCCCTTCTGGGTAACATTAAACATGGGGCCGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021490.12 ENSMUST00000117053.8 ENSMUST00000118101.2 |
||
| CDS-3UTR CCA 90 bp | TTGCACTCAGGCATGGGTGAAACGGCCCCATGTTTAATGTTACCCAGAAGGGGAGGCTCTTCAGTCTGGTaGATGGAATGGAGCAGATAC | + |
|
Preference number: 4 (lower is better) Translates to: LHSGMGETAPCLMLPRRGGSSVW*MEWSRY Trigger: GTATCTGCTCCATTCCATCCACCAGACTGAAGAGCC...TCCCCTTCTGGGTAACATTAAACATGGGGCCGTTTCACCCATGCCTGAGTGCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021490.12 ENSMUST00000117053.8 ENSMUST00000118101.2 |
||
| CDS-3UTR CCA 90 bp | AACGGCCCCATGTTTAATGTTACCCAGAAGGGGACATGGCTTTCAGGAGAGAGGGATGGCTCTTCAGTCTaGTGGATGGAATGGAGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: NGPMFNVTQKGTWLSGERDGSSV*WMEWSR Trigger: TCTGCTCCATTCCATCCACCAGACTGAAGAGCCATC...CCTCTCTCCTGAAAGCCATGTCCCCTTCTGGGTAACATTAAACATGGGGCCGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021490.12 ENSMUST00000117053.8 ENSMUST00000118101.2 |
||
| CDS-3UTR CCA 90 bp | TTGGGCCATGAGAGAAGGGCAATTAAGTGTCCCCAGACAGCCCTGGCCAGTTTGACCCCTTTTCATCGATaGTCAGCACAGCCTTACTTA | + |
|
Preference number: 4 (lower is better) Translates to: LGHERRAIKCPQTALASLTPFHR*SAQPYL Trigger: TAAGTAAGGCTGTGCTGACCATCGATGAAAAGGGGT...CAAACTGGCCAGGGCTGTCTGGGGACACTTAATTGCCCTTCTCTCATGGCCCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000117053.8 |
||
| CDS-3UTR TCA 90 bp | GGCCCCATGTTTAATGTTACCCAGAAGGGGACATGGCTTTCAGGAGAGAGGCTGCACAAATTTGTCTACTaGTGTCAGGTCCTGGTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: GPMFNVTQKGTWLSGERLHKFVY*CQVLVD Trigger: ATCCACCAGGACCTGACATCAGTAGACAAATTTGTG...CAGCCTCTCTCCTGAAAGCCATGTCCCCTTCTGGGTAACATTAAACATGGGGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021490.12 ENSMUST00000117053.8 ENSMUST00000118101.2 |
||
| CDS-3UTR TCA 90 bp | GGCATGGGTGAAACGGCCCCATGTTTAATGTTACCCAGAAGGGGACATGGCTTTCCATCACGTAATTGTTaGTCTGTGTCTTGGCCTGAC | + |
|
Preference number: 4 (lower is better) Translates to: GMGETAPCLMLPRRGHGFPSRNC*SVSWPD Trigger: GTCAGGCCAAGACACAGATCAACAATTACGTGATGG...AAAGCCATGTCCCCTTCTGGGTAACATTAAACATGGGGCCGTTTCACCCATGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021490.12 ENSMUST00000117053.8 ENSMUST00000118101.2 |
||
| CDS-3UTR TCA 90 bp | CCTTCTCCTGGTAGTTCTCTCTTCTCCCTAATGACCCTTTCAACACTCCCCTCCCCATCACGTAATTGTTaGTCTGTGTCTTGGCCTGAC | + |
|
Preference number: 4 (lower is better) Translates to: PSPGSSLFSLMTLSTLPSPSRNC*SVSWPD Trigger: GTCAGGCCAAGACACAGATCAACAATTACGTGATGG...GGAGGGGAGTGTTGAAAGGGTCATTAGGGAGAAGAGAGAACTACCAGGAGAAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117053.8 |
||
| CDS-3UTR TCA 90 bp | CACGGTCAGCCAGGACAAAGTGGCTTTGTGTCTAGTGGCCTGATTGGCAGGAGACACTCTCCAGGTTCTTaGCAATGTTCACTATTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: HGQPGQSGFVSSGLIGRRHSPGS*QCSLFP Trigger: AGGAAATAGTGAACATTGTCAAGAACCTGGAGAGTG...TCTCCTGCCAATCAGGCCACTAGACACAAAGCCACTTTGTCCTGGCTGACCGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117053.8 |
||
| CDS-3UTR GCA 90 bp | TGTTTGCACTCAGGCATGGGTGAAACGGCCCCATGTTTAATGTTACCCAGAAGGACCGGCAGCCAAAGTTaGTGTCAAGTTTGGCATTCC | + |
|
Preference number: 4 (lower is better) Translates to: CLHSGMGETAPCLMLPRRTGSQS*CQVWHS Trigger: GGAATGCCAAACTTGACAGCAACTTTGGCTGCCGGT...CCTTCTGGGTAACATTAAACATGGGGCCGTTTCACCCATGCCTGAGTGCAAACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021490.12 ENSMUST00000118101.2 |
||
| CDS-3UTR GCA 90 bp | TCAGGCATGGGTGAAACGGCCCCATGTTTAATGTTACCCAGAAGGGGACATGGCTATGATGAAGTAGGTTaGGAAGTTGCCTGTGAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: SGMGETAPCLMLPRRGHGYDEVG*EVACEQ Trigger: CTGCTCACAGGCAACTTCGCAACCTACTTCATCATA...GCCATGTCCCCTTCTGGGTAACATTAAACATGGGGCCGTTTCACCCATGCCTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021490.12 ENSMUST00000118101.2 |
||
| CDS-3UTR CCA 90 bp | TTGCACTCAGGCATGGGTGAAACGGCCCCATGTTTAATGTTACCCAGAAGGGGATACCAGAAACACTTGTaGATCTCCGCTTCAGGCAAG | + |
|
Preference number: 4 (lower is better) Translates to: LHSGMGETAPCLMLPRRGYQKHL*ISASGK Trigger: CTTGCCTGAAGCGGAGATCCACAAGTGTTTCTGGTA...TCCCCTTCTGGGTAACATTAAACATGGGGCCGTTTCACCCATGCCTGAGTGCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021490.12 ENSMUST00000117053.8 ENSMUST00000118101.2 |
||
| CDS-3UTR CCA 90 bp | ACTTCAGGAAGATCTCAGGGGGACCCTAGCGAAAGGAAAGGTGTCCTTCTCATGTACCAGAAACACTTGTaGATCTCCGCTTCAGGCAAG | + |
|
Preference number: 4 (lower is better) Translates to: TSGRSQGDPSERKGVLLMYQKHL*ISASGK Trigger: CTTGCCTGAAGCGGAGATCCACAAGTGTTTCTGGTA...CATGAGAAGGACACCTTTCCTTTCGCTAGGGTCCCCCTGAGATCTTCCTGAAGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000117053.8 |
||
| CDS-3UTR CCA 90 bp | TTGCACTCAGGCATGGGTGAAACGGCCCCATGTTTAATGTTACCCAGAAGGGGACTTCAGTCTGGTGGATaGAATGGAGCAGATACCAGA | + |
|
Preference number: 4 (lower is better) Translates to: LHSGMGETAPCLMLPRRGLQSGG*NGADTR Trigger: TCTGGTATCTGCTCCATTCCATCCACCAGACTGAAG...TCCCCTTCTGGGTAACATTAAACATGGGGCCGTTTCACCCATGCCTGAGTGCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021490.12 ENSMUST00000117053.8 ENSMUST00000118101.2 |
||
| CDS-3UTR CCA 90 bp | AACGGCCCCATGTTTAATGTTACCCAGAAGGGGACATGGCTTTCAGGAGAGAGGCTTCAGTCTGGTGGATaGAATGGAGCAGATACCAGA | + |
|
Preference number: 4 (lower is better) Translates to: NGPMFNVTQKGTWLSGERLQSGG*NGADTR Trigger: TCTGGTATCTGCTCCATTCCATCCACCAGACTGAAG...CCTCTCTCCTGAAAGCCATGTCCCCTTCTGGGTAACATTAAACATGGGGCCGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021490.12 ENSMUST00000117053.8 ENSMUST00000118101.2 |
||
| CDS-3UTR CCA 90 bp | GAAACGGCCCCATGTTTAATGTTACCCAGAAGGGGACATGGCTTTCAGGAGAGAGGCTCTTCAGTCTGGTaGATGGAATGGAGCAGATAC | + |
|
Preference number: 4 (lower is better) Translates to: ETAPCLMLPRRGHGFQERGSSVW*MEWSRY Trigger: GTATCTGCTCCATTCCATCCACCAGACTGAAGAGCC...TCTCTCCTGAAAGCCATGTCCCCTTCTGGGTAACATTAAACATGGGGCCGTTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021490.12 ENSMUST00000117053.8 ENSMUST00000118101.2 |
||
| CDS-3UTR CCA 90 bp | GAAACGGCCCCATGTTTAATGTTACCCAGAAGGGGACATGGCTTTCAGGAGAGAGATGGCTCTTCAGTCTaGTGGATGGAATGGAGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: ETAPCLMLPRRGHGFQERDGSSV*WMEWSR Trigger: TCTGCTCCATTCCATCCACCAGACTGAAGAGCCATC...TCTCTCCTGAAAGCCATGTCCCCTTCTGGGTAACATTAAACATGGGGCCGTTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021490.12 ENSMUST00000117053.8 ENSMUST00000118101.2 |
||
| CDS-3UTR TCA 90 bp | TTGCACTCAGGCATGGGTGAAACGGCCCCATGTTTAATGTTACCCAGAAGGGGACACAAATTTGTCTACTaGTGTCAGGTCCTGGTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: LHSGMGETAPCLMLPRRGHKFVY*CQVLVD Trigger: ATCCACCAGGACCTGACATCAGTAGACAAATTTGTG...TCCCCTTCTGGGTAACATTAAACATGGGGCCGTTTCACCCATGCCTGAGTGCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021490.12 ENSMUST00000117053.8 ENSMUST00000118101.2 |
||
| CDS-3UTR TCA 90 bp | AACGGCCCCATGTTTAATGTTACCCAGAAGGGGACATGGCTTTCAGGAGAGAGGCACAAATTTGTCTACTaGTGTCAGGTCCTGGTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: NGPMFNVTQKGTWLSGERHKFVY*CQVLVD Trigger: ATCCACCAGGACCTGACATCAGTAGACAAATTTGTG...CCTCTCTCCTGAAAGCCATGTCCCCTTCTGGGTAACATTAAACATGGGGCCGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021490.12 ENSMUST00000117053.8 ENSMUST00000118101.2 |
||
| CDS-3UTR TCA 90 bp | GAAACGGCCCCATGTTTAATGTTACCCAGAAGGGGACATGGCTTTCAGGAGAGAATCTGTGTCTTGGCCTaGCTGCTGTCTGTAAAGTTG | + |
|
Preference number: 4 (lower is better) Translates to: ETAPCLMLPRRGHGFQERICVLA*LLSVKL Trigger: CAACTTTACAGACAGCAGTCAGGCCAAGACACAGAT...TCTCTCCTGAAAGCCATGTCCCCTTCTGGGTAACATTAAACATGGGGCCGTTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021490.12 ENSMUST00000117053.8 ENSMUST00000118101.2 |
||
| CDS-3UTR TCA 90 bp | TGTTTGCACTCAGGCATGGGTGAAACGGCCCCATGTTTAATGTTACCCAGAAGGATCTGTGTCTTGGCCTaGCTGCTGTCTGTAAAGTTG | + |
|
Preference number: 4 (lower is better) Translates to: CLHSGMGETAPCLMLPRRICVLA*LLSVKL Trigger: CAACTTTACAGACAGCAGTCAGGCCAAGACACAGAT...CCTTCTGGGTAACATTAAACATGGGGCCGTTTCACCCATGCCTGAGTGCAAACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021490.12 ENSMUST00000117053.8 ENSMUST00000118101.2 |
||
| CDS-3UTR TCA 90 bp | ATGGGTGAAACGGCCCCATGTTTAATGTTACCCAGAAGGGGACATGGCTTTCAGCCATCACGTAATTGTTaGTCTGTGTCTTGGCCTGAC | + |
|
Preference number: 4 (lower is better) Translates to: MGETAPCLMLPRRGHGFQPSRNC*SVSWPD Trigger: GTCAGGCCAAGACACAGATCAACAATTACGTGATGG...CTGAAAGCCATGTCCCCTTCTGGGTAACATTAAACATGGGGCCGTTTCACCCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021490.12 ENSMUST00000117053.8 ENSMUST00000118101.2 |
||
| CDS-3UTR GCA 90 bp | TCAGGCATGGGTGAAACGGCCCCATGTTTAATGTTACCCAGAAGGGGACATGGCACTGGAAGGGATCAATaGTTGGGTCTTCATAGAGTT | + |
|
Preference number: 4 (lower is better) Translates to: SGMGETAPCLMLPRRGHGTGRDQ*LGLHRV Trigger: AACTCTATGAAGACCCAAGCATTGATCCCTTCCAGT...GCCATGTCCCCTTCTGGGTAACATTAAACATGGGGCCGTTTCACCCATGCCTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021490.12 ENSMUST00000117053.8 ENSMUST00000118101.2 |
||
| CDS-3UTR CCA 90 bp | ACGGCCCCATGTTTAATGTTACCCAGAAGGGGACATGGCTTTCAGGAGAGAGGCCCATTTCCTGACAGTTaGGCCATCTTTTTGAACAAG | + |
|
Preference number: 4 (lower is better) Translates to: TAPCLMLPRRGHGFQERGPFPDS*AIFLNK Trigger: CTTGTTCAAAAAGATGGCCCAACTGTCAGGAAATGG...GCCTCTCTCCTGAAAGCCATGTCCCCTTCTGGGTAACATTAAACATGGGGCCGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000021490.12 ENSMUST00000117053.8 ENSMUST00000118101.2 |
||
| CDS-3UTR CCA 90 bp | AACGGCCCCATGTTTAATGTTACCCAGAAGGGGACATGGCTTTCAGGAGAGAGGCTTCTGCATCTTCCCTaGATCGGGTATGATGAAGTA | + |
|
Preference number: 4 (lower is better) Translates to: NGPMFNVTQKGTWLSGERLLHLP*IGYDEV Trigger: TACTTCATCATACCCGATCCAGGGAAGATGCAGAAG...CCTCTCTCCTGAAAGCCATGTCCCCTTCTGGGTAACATTAAACATGGGGCCGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021490.12 ENSMUST00000117053.8 ENSMUST00000118101.2 |
||
| CDS-3UTR CCA 90 bp | GGTGAAACGGCCCCATGTTTAATGTTACCCAGAAGGGGACATGGCTTTCAGGAGCTTCTGCATCTTCCCTaGATCGGGTATGATGAAGTA | + |
|
Preference number: 4 (lower is better) Translates to: GETAPCLMLPRRGHGFQELLHLP*IGYDEV Trigger: TACTTCATCATACCCGATCCAGGGAAGATGCAGAAG...CTCCTGAAAGCCATGTCCCCTTCTGGGTAACATTAAACATGGGGCCGTTTCACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021490.12 ENSMUST00000117053.8 ENSMUST00000118101.2 |
||
| CDS-3UTR CCA 90 bp | GGTGAAACGGCCCCATGTTTAATGTTACCCAGAAGGGGACATGGCTTTCAGGAGACCCCTTTTCATCGATaGTCAGCACAGCCTTACTTA | + |
|
Preference number: 4 (lower is better) Translates to: GETAPCLMLPRRGHGFQETPFHR*SAQPYL Trigger: TAAGTAAGGCTGTGCTGACCATCGATGAAAAGGGGT...CTCCTGAAAGCCATGTCCCCTTCTGGGTAACATTAAACATGGGGCCGTTTCACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000021490.12 ENSMUST00000117053.8 ENSMUST00000118101.2 |
||
| CDS-3UTR TCA 90 bp | CACTCAGGCATGGGTGAAACGGCCCCATGTTTAATGTTACCCAGAAGGGGACATCACTCTCCAGGTTCTTaGCAATGTTCACTATTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: HSGMGETAPCLMLPRRGHHSPGS*QCSLFP Trigger: AGGAAATAGTGAACATTGTCAAGAACCTGGAGAGTG...ATGTCCCCTTCTGGGTAACATTAAACATGGGGCCGTTTCACCCATGCCTGAGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021490.12 ENSMUST00000117053.8 ENSMUST00000118101.2 |
||
| CDS-3UTR TCA 90 bp | CCCATGTTTAATGTTACCCAGAAGGGGACATGGCTTTCAGGAGAGAGGCTGATTGGGACATCATTTGTGTaGTCCTGGATGAAGATGAGG | + |
|
Preference number: 4 (lower is better) Translates to: PMFNVTQKGTWLSGERLIGTSFV*SWMKMR Trigger: CCTCATCTTCATCCAGGATCACACAAATGATGTCCC...AATCAGCCTCTCTCCTGAAAGCCATGTCCCCTTCTGGGTAACATTAAACATGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021490.12 ENSMUST00000117053.8 ENSMUST00000118101.2 |
||
| CDS-3UTR GCA 90 bp | GAAACGGCCCCATGTTTAATGTTACCCAGAAGGGGACATGGCTTTCAGGAGAGATATGATGAAGTAGGTTaGGAAGTTGCCTGTGAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: ETAPCLMLPRRGHGFQERYDEVG*EVACEQ Trigger: CTGCTCACAGGCAACTTCGCAACCTACTTCATCATA...TCTCTCCTGAAAGCCATGTCCCCTTCTGGGTAACATTAAACATGGGGCCGTTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021490.12 ENSMUST00000118101.2 |
||
| CDS-3UTR CCA 90 bp | ACGGCCCCATGTTTAATGTTACCCAGAAGGGGACATGGCTTTCAGGAGAGAGGCGAAGGGATCAATGCTTaGGTCTTCATAGAGTTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: TAPCLMLPRRGHGFQERGEGINA*VFIEFF Trigger: GAAAAACTCTATGAAGACCCAAGCATTGATCCCTTC...GCCTCTCTCCTGAAAGCCATGTCCCCTTCTGGGTAACATTAAACATGGGGCCGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000021490.12 ENSMUST00000117053.8 ENSMUST00000118101.2 |
||
| CDS-3UTR CCA 90 bp | ATACCTCAGGGGACAGAGGAAGACACAGACACCACAAGGAGAGGGATTTGCTGTCCATTTCCTGACAGTTaGGCCATCTTTTTGAACAAG | + |
|
Preference number: 4 (lower is better) Translates to: IPQGTEEDTDTTRRGICCPFPDS*AIFLNK Trigger: CTTGTTCAAAAAGATGGCCCAACTGTCAGGAAATGG...ACAGCAAATCCCTCTCCTTGTGGTGTCTGTGTCTTCCTCTGTCCCCTGAGGTAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000117053.8 |
||
| CDS-3UTR CCA 90 bp | GAAACGGCCCCATGTTTAATGTTACCCAGAAGGGGACATGGCTTTCAGGAGAGAACCCCTTTTCATCGATaGTCAGCACAGCCTTACTTA | + |
|
Preference number: 4 (lower is better) Translates to: ETAPCLMLPRRGHGFQERTPFHR*SAQPYL Trigger: TAAGTAAGGCTGTGCTGACCATCGATGAAAAGGGGT...TCTCTCCTGAAAGCCATGTCCCCTTCTGGGTAACATTAAACATGGGGCCGTTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000021490.12 ENSMUST00000117053.8 ENSMUST00000118101.2 |
||
| CDS-3UTR GCA 90 bp | ATGGGTGAAACGGCCCCATGTTTAATGTTACCCAGAAGGGGACATGGCTTTCAGACTGGAAGGGATCAATaGTTGGGTCTTCATAGAGTT | + |
|
Preference number: 4 (lower is better) Translates to: MGETAPCLMLPRRGHGFQTGRDQ*LGLHRV Trigger: AACTCTATGAAGACCCAAGCATTGATCCCTTCCAGT...CTGAAAGCCATGTCCCCTTCTGGGTAACATTAAACATGGGGCCGTTTCACCCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021490.12 ENSMUST00000117053.8 ENSMUST00000118101.2 |
||
| CDS-3UTR CCA 90 bp | GAAACGGCCCCATGTTTAATGTTACCCAGAAGGGGACATGGCTTTCAGGAGAGACCATTTCCTGACAGTTaGGCCATCTTTTTGAACAAG | + |
|
Preference number: 4 (lower is better) Translates to: ETAPCLMLPRRGHGFQERPFPDS*AIFLNK Trigger: CTTGTTCAAAAAGATGGCCCAACTGTCAGGAAATGG...TCTCTCCTGAAAGCCATGTCCCCTTCTGGGTAACATTAAACATGGGGCCGTTTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000021490.12 ENSMUST00000117053.8 ENSMUST00000118101.2 |
||
| CDS-3UTR CCA 90 bp | TTAAGTGTCCCCAGACAGCCCTGGCCAGTTTGTAAAAACACACTAGTTCCTGATCTTCAGTCTGGTGGATaGAATGGAGCAGATACCAGA | + |
|
Preference number: 4 (lower is better) Translates to: LSVPRQPWPVCKNTLVPDLQSGG*NGADTR Trigger: TCTGGTATCTGCTCCATTCCATCCACCAGACTGAAG...ATCAGGAACTAGTGTGTTTTTACAAACTGGCCAGGGCTGTCTGGGGACACTTAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000117053.8 |
||
| CDS-3UTR CCA 90 bp | TGTTTGCACTCAGGCATGGGTGAAACGGCCCCATGTTTAATGTTACCCAGAAGGTGCATGGCCATGTTATaGATCATCGGTACCTTGATT | + |
|
Preference number: 4 (lower is better) Translates to: CLHSGMGETAPCLMLPRRCMAML*IIGTLI Trigger: AATCAAGGTACCGATGATCCATAACATGGCCATGCA...CCTTCTGGGTAACATTAAACATGGGGCCGTTTCACCCATGCCTGAGTGCAAACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021490.12 ENSMUST00000118101.2 |
||
| CDS-3UTR TCA 90 bp | CCCATGTTTAATGTTACCCAGAAGGGGACATGGCTTTCAGGAGAGAGGCTGATTCACTCTCCAGGTTCTTaGCAATGTTCACTATTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: PMFNVTQKGTWLSGERLIHSPGS*QCSLFP Trigger: AGGAAATAGTGAACATTGTCAAGAACCTGGAGAGTG...AATCAGCCTCTCTCCTGAAAGCCATGTCCCCTTCTGGGTAACATTAAACATGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021490.12 ENSMUST00000117053.8 ENSMUST00000118101.2 |
||
| CDS-3UTR CCA 90 bp | TGTTTGCACTCAGGCATGGGTGAAACGGCCCCATGTTTAATGTTACCCAGAAGGGAAGGGATCAATGCTTaGGTCTTCATAGAGTTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: CLHSGMGETAPCLMLPRREGINA*VFIEFF Trigger: GAAAAACTCTATGAAGACCCAAGCATTGATCCCTTC...CCTTCTGGGTAACATTAAACATGGGGCCGTTTCACCCATGCCTGAGTGCAAACA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000021490.12 ENSMUST00000117053.8 ENSMUST00000118101.2 |
||
| CDS-3UTR GCA 90 bp | ATGTTTAATGTTACCCAGAAGGGGACATGGCTTTCAGGAGAGAGGCTGATTCCTACTGGAAGGGATCAATaGTTGGGTCTTCATAGAGTT | + |
|
Preference number: 4 (lower is better) Translates to: MFNVTQKGTWLSGERLIPTGRDQ*LGLHRV Trigger: AACTCTATGAAGACCCAAGCATTGATCCCTTCCAGT...AGGAATCAGCCTCTCTCCTGAAAGCCATGTCCCCTTCTGGGTAACATTAAACAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021490.12 ENSMUST00000117053.8 ENSMUST00000118101.2 |
||
| CDS-3UTR CCA 90 bp | ATGTTTAATGTTACCCAGAAGGGGACATGGCTTTCAGGAGAGAGGCTGATTCCTTGCATGGCCATGTTATaGATCATCGGTACCTTGATT | + |
|
Preference number: 4 (lower is better) Translates to: MFNVTQKGTWLSGERLIPCMAML*IIGTLI Trigger: AATCAAGGTACCGATGATCCATAACATGGCCATGCA...AGGAATCAGCCTCTCTCCTGAAAGCCATGTCCCCTTCTGGGTAACATTAAACAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021490.12 ENSMUST00000118101.2 |
||
| 3UTR CAA 72 bp | AGGCACTGGATTTATATTTATCCCTGGAATACTATGTaGAGGGCCTGGAGATGGGGTAGGTGCAGTTGTATA | + |
|
Preference number: 4 (lower is better) Translates to: RHWIYIYPWNTM*RAWRWGRCSCI Trigger: TATACAACTGCACCTACCCCATCTCCAGGCCCTCAACATAGTATTCCAGGGATAAATATAAATCCAGTGCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117053.8 |
||
| CDS-3UTR CAA 90 bp | CAGAAGGGGACATGGCCCTCTGCCTTCAGTGCTGGAGCTGGGACATCATGGGGATCACTCTCCAGGTTCTaGACAATGTTCACTATTTCC | + |
|
Preference number: 5 (lower is better) Translates to: QKGTWPSAFSAGAGTSWGSLSRF*TMFTIS Trigger: GGAAATAGTGAACATTGTCAAGAACCTGGAGAGTGA...TCCCCATGATGTCCCAGCTCCAGCACTGAAGGCAGAGGGCCATGTCCCCTTCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117053.8 |
||
| CDS-3UTR CAA 90 bp | GGCCCCATGTTTAATGTTACCCAGAAGGGGACATGGCTTTCAGGAGAGAGGCTGAGATACCAGAAACACTaGTGGATCTCCGCTTCAGGC | + |
|
Preference number: 5 (lower is better) Translates to: GPMFNVTQKGTWLSGERLRYQKH*WISASG Trigger: GCCTGAAGCGGAGATCCACAAGTGTTTCTGGTATCT...CAGCCTCTCTCCTGAAAGCCATGTCCCCTTCTGGGTAACATTAAACATGGGGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021490.12 ENSMUST00000117053.8 ENSMUST00000118101.2 |
||
| CDS-3UTR CAA 90 bp | GGTGAAACGGCCCCATGTTTAATGTTACCCAGAAGGGGACATGGCTTTCAGGAGGACCGGCAGCCAAAGTaGCTGTCAAGTTTGGCATTC | + |
|
Preference number: 5 (lower is better) Translates to: GETAPCLMLPRRGHGFQEDRQPK*LSSLAF Trigger: GAATGCCAAACTTGACAGCAACTTTGGCTGCCGGTC...CTCCTGAAAGCCATGTCCCCTTCTGGGTAACATTAAACATGGGGCCGTTTCACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021490.12 ENSMUST00000118101.2 |
||
| CDS-3UTR CAA 90 bp | GGCATGGGTGAAACGGCCCCATGTTTAATGTTACCCAGAAGGGGACATGGCTTTGACCGGCAGCCAAAGTaGCTGTCAAGTTTGGCATTC | + |
|
Preference number: 5 (lower is better) Translates to: GMGETAPCLMLPRRGHGFDRQPK*LSSLAF Trigger: GAATGCCAAACTTGACAGCAACTTTGGCTGCCGGTC...AAAGCCATGTCCCCTTCTGGGTAACATTAAACATGGGGCCGTTTCACCCATGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021490.12 ENSMUST00000118101.2 |
||
| CDS-3UTR CAA 90 bp | TTGCACTCAGGCATGGGTGAAACGGCCCCATGTTTAATGTTACCCAGAAGGGGAAAGGTGATGGAGACATaGCAGATGGTAAGAGCCACC | + |
|
Preference number: 5 (lower is better) Translates to: LHSGMGETAPCLMLPRRGKVMET*QMVRAT Trigger: GGTGGCTCTTACCATCTGCAATGTCTCCATCACCTT...TCCCCTTCTGGGTAACATTAAACATGGGGCCGTTTCACCCATGCCTGAGTGCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021490.12 ENSMUST00000117053.8 ENSMUST00000118101.2 |
||
| CDS-3UTR CAA 90 bp | TTGGGCCATGAGAGAAGGGCAATTAAGTGTCCCCAGACAGCCCTGGCCAGTTTGAGTTGGGCCATCTTTTaGAACAAGGTGATGGAGACA | + |
|
Preference number: 5 (lower is better) Translates to: LGHERRAIKCPQTALASLSWAIF*NKVMET Trigger: TGTCTCCATCACCTTGTTCAAAAAGATGGCCCAACT...CAAACTGGCCAGGGCTGTCTGGGGACACTTAATTGCCCTTCTCTCATGGCCCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117053.8 |
||
| CDS-3UTR CAA 90 bp | AACGGCCCCATGTTTAATGTTACCCAGAAGGGGACATGGCTTTCAGGAGAGAGGAGATACCAGAAACACTaGTGGATCTCCGCTTCAGGC | + |
|
Preference number: 5 (lower is better) Translates to: NGPMFNVTQKGTWLSGERRYQKH*WISASG Trigger: GCCTGAAGCGGAGATCCACAAGTGTTTCTGGTATCT...CCTCTCTCCTGAAAGCCATGTCCCCTTCTGGGTAACATTAAACATGGGGCCGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021490.12 ENSMUST00000117053.8 ENSMUST00000118101.2 |
||
| CDS-3UTR CAA 90 bp | CAACCAGAAGGGGACATGGCCCTCTGCCTTCAGTGCTGGAGCTGGGACATCATGTTTTCATGTTTAGTCTaGGTTATGAGAAGCAGACAG | + |
|
Preference number: 5 (lower is better) Translates to: QPEGDMALCLQCWSWDIMFSCLV*VMRSRQ Trigger: CTGTCTGCTTCTCATAACCAAGACTAAACATGAAAA...CATGATGTCCCAGCTCCAGCACTGAAGGCAGAGGGCCATGTCCCCTTCTGGTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117053.8 |
||
| CDS-3UTR CAA 90 bp | CAGGGAACGAATGACAGCAACAGGCTGGGGTCCTGCTCCAGTCCTGTGGAGGAACTAAATCAACCAACCTaGTCAATAATTGTCGTCTCA | + |
|
Preference number: 5 (lower is better) Translates to: QGTNDSNRLGSCSSPVEELNQPT*SIIVVS Trigger: TGAGACGACAATTATTGACAAGGTTGGTTGATTTAG...TTCCTCCACAGGACTGGAGCAGGACCCCAGCCTGTTGCTGTCATTCGTTCCCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117053.8 |
||
| CDS CCA 90 bp | AACACGCTGCTACCAGTTTGTAGTGATGATGGCTCTTCAGTCTGGTaGATGGAATGGAGCAGATACCAGAAACACTTGTGGATCTCCGCT | + |
|
Preference number: 5 (lower is better) Translates to: NTLLPVCSDDGSSVW*MEWSRYQKHLWISA Trigger: AGCGGAGATCCACAAGTGTTTCTGGTATCTGCTCCATTCCATCCACCAGACTGAAGAGCCATCATCACTACAAACTGGTAGCAGCGTGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021490.12 ENSMUST00000117053.8 ENSMUST00000118101.2 |
||
| CDS-3UTR CAA 90 bp | GGCATGGGTGAAACGGCCCCATGTTTAATGTTACCCAGAAGGGGACATGGCTTTAGTTGGGCCATCTTTTaGAACAAGGTGATGGAGACA | + |
|
Preference number: 5 (lower is better) Translates to: GMGETAPCLMLPRRGHGFSWAIF*NKVMET Trigger: TGTCTCCATCACCTTGTTCAAAAAGATGGCCCAACT...AAAGCCATGTCCCCTTCTGGGTAACATTAAACATGGGGCCGTTTCACCCATGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000021490.12 ENSMUST00000117053.8 ENSMUST00000118101.2 |
||
| CDS-3UTR CAA 90 bp | AACGGCCCCATGTTTAATGTTACCCAGAAGGGGACATGGCTTTCAGGAGAGAGGCTAGTAGACTCATCATaGACTCCAAGTCATGGGTCT | + |
|
Preference number: 5 (lower is better) Translates to: NGPMFNVTQKGTWLSGERLVDSS*TPSHGS Trigger: AGACCCATGACTTGGAGTCAATGATGAGTCTACTAG...CCTCTCTCCTGAAAGCCATGTCCCCTTCTGGGTAACATTAAACATGGGGCCGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021490.12 ENSMUST00000117053.8 ENSMUST00000118101.2 |
||
| CDS CCA 90 bp | TCTTCAGTCTGGTGGATGGAATGGAGCAGATACCAGAAACACTTGTaGATCTCCGCTTCAGGCAAGCCTGTTTTGTTGAACCTTAGAGTC | + |
|
Preference number: 5 (lower is better) Translates to: SSVWWMEWSRYQKHL*ISASGKPVLLNLRV Trigger: GACTCTAAGGTTCAACAAAACAGGCTTGCCTGAAGCGGAGATCCACAAGTGTTTCTGGTATCTGCTCCATTCCATCCACCAGACTGAAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021490.12 ENSMUST00000117053.8 ENSMUST00000118101.2 |
||
| CDS CCA 90 bp | ATGAACACGCTGCTACCAGTTTGTAGTGATGATGGCTCTTCAGTCTaGTGGATGGAATGGAGCAGATACCAGAAACACTTGTGGATCTCC | + |
|
Preference number: 5 (lower is better) Translates to: MNTLLPVCSDDGSSV*WMEWSRYQKHLWIS Trigger: GGAGATCCACAAGTGTTTCTGGTATCTGCTCCATTCCATCCACCAGACTGAAGAGCCATCATCACTACAAACTGGTAGCAGCGTGTTCAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021490.12 ENSMUST00000117053.8 ENSMUST00000118101.2 |
||
| CDS-3UTR CAA 90 bp | TTAAGTGTCCCCAGACAGCCCTGGCCAGTTTGTAAAAACACACTAGTTCCTGATAAGGTGATGGAGACATaGCAGATGGTAAGAGCCACC | + |
|
Preference number: 5 (lower is better) Translates to: LSVPRQPWPVCKNTLVPDKVMET*QMVRAT Trigger: GGTGGCTCTTACCATCTGCAATGTCTCCATCACCTT...ATCAGGAACTAGTGTGTTTTTACAAACTGGCCAGGGCTGTCTGGGGACACTTAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000117053.8 |
||
| CDS-3UTR CAA 90 bp | ATGGGTGAAACGGCCCCATGTTTAATGTTACCCAGAAGGGGACATGGCTTTCAGGTCTCCAGGATGTGTTaGCTTAAGTTGCCATTGGAT | + |
|
Preference number: 5 (lower is better) Translates to: MGETAPCLMLPRRGHGFQVSRMC*LKLPLD Trigger: ATCCAATGGCAACTTAAGCAAACACATCCTGGAGAC...CTGAAAGCCATGTCCCCTTCTGGGTAACATTAAACATGGGGCCGTTTCACCCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021490.12 ENSMUST00000117053.8 ENSMUST00000118101.2 |
||
| CDS-3UTR CAA 90 bp | ATGTTTAATGTTACCCAGAAGGGGACATGGCTTTCAGGAGAGAGGCTGATTCCTAGATACCAGAAACACTaGTGGATCTCCGCTTCAGGC | + |
|
Preference number: 5 (lower is better) Translates to: MFNVTQKGTWLSGERLIPRYQKH*WISASG Trigger: GCCTGAAGCGGAGATCCACAAGTGTTTCTGGTATCT...AGGAATCAGCCTCTCTCCTGAAAGCCATGTCCCCTTCTGGGTAACATTAAACAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021490.12 ENSMUST00000117053.8 ENSMUST00000118101.2 |
||
| CDS-3UTR CAA 90 bp | GGCATGGGTGAAACGGCCCCATGTTTAATGTTACCCAGAAGGGGACATGGCTTTCTGCTGTCTGTAAAGTaGATGGAGATCATGTCAGAA | + |
|
Preference number: 5 (lower is better) Translates to: GMGETAPCLMLPRRGHGFLLSVK*MEIMSE Trigger: TTCTGACATGATCTCCATCAACTTTACAGACAGCAG...AAAGCCATGTCCCCTTCTGGGTAACATTAAACATGGGGCCGTTTCACCCATGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021490.12 ENSMUST00000117053.8 ENSMUST00000118101.2 |
||
| CDS-3UTR CAA 90 bp | GGTGAAACGGCCCCATGTTTAATGTTACCCAGAAGGGGACATGGCTTTCAGGAGTCACTCTCCAGGTTCTaGACAATGTTCACTATTTCC | + |
|
Preference number: 5 (lower is better) Translates to: GETAPCLMLPRRGHGFQESLSRF*TMFTIS Trigger: GGAAATAGTGAACATTGTCAAGAACCTGGAGAGTGA...CTCCTGAAAGCCATGTCCCCTTCTGGGTAACATTAAACATGGGGCCGTTTCACC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021490.12 ENSMUST00000117053.8 ENSMUST00000118101.2 |
||
| CDS-3UTR CAA 90 bp | TTGCACTCAGGCATGGGTGAAACGGCCCCATGTTTAATGTTACCCAGAAGGGGATCACTCTCCAGGTTCTaGACAATGTTCACTATTTCC | + |
|
Preference number: 5 (lower is better) Translates to: LHSGMGETAPCLMLPRRGSLSRF*TMFTIS Trigger: GGAAATAGTGAACATTGTCAAGAACCTGGAGAGTGA...TCCCCTTCTGGGTAACATTAAACATGGGGCCGTTTCACCCATGCCTGAGTGCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021490.12 ENSMUST00000117053.8 ENSMUST00000118101.2 |
||
| CDS TCA 90 bp | TTGACCCCTTTTCATCGATGGTCAGCACAGCCTTACTTACCACCTTaGAGGACTTCTGAAGTGTGTCATTCATGTCAGAGCTATTGGTGC | + |
|
Preference number: 5 (lower is better) Translates to: LTPFHRWSAQPYLPP*RTSEVCHSCQSYWC Trigger: GCACCAATAGCTCTGACATGAATGACACACTTCAGAAGTCCTTCAAGGTGGTAAGTAAGGCTGTGCTGACCATCGATGAAAAGGGGTCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021490.12 ENSMUST00000117053.8 ENSMUST00000118101.2 |
||
| CDS-3UTR CAA 90 bp | CCCATGTTTAATGTTACCCAGAAGGGGACATGGCTTTCAGGAGAGAGGCTGATTAGTTGGGCCATCTTTTaGAACAAGGTGATGGAGACA | + |
|
Preference number: 5 (lower is better) Translates to: PMFNVTQKGTWLSGERLISWAIF*NKVMET Trigger: TGTCTCCATCACCTTGTTCAAAAAGATGGCCCAACT...AATCAGCCTCTCTCCTGAAAGCCATGTCCCCTTCTGGGTAACATTAAACATGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021490.12 ENSMUST00000117053.8 ENSMUST00000118101.2 |
||
| CDS-3UTR CAA 90 bp | CCCATGTTTAATGTTACCCAGAAGGGGACATGGCTTTCAGGAGAGAGGCTGATTGTCTCCAGGATGTGTTaGCTTAAGTTGCCATTGGAT | + |
|
Preference number: 5 (lower is better) Translates to: PMFNVTQKGTWLSGERLIVSRMC*LKLPLD Trigger: ATCCAATGGCAACTTAAGCAAACACATCCTGGAGAC...AATCAGCCTCTCTCCTGAAAGCCATGTCCCCTTCTGGGTAACATTAAACATGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021490.12 ENSMUST00000117053.8 ENSMUST00000118101.2 |
||
| CDS-3UTR CAA 90 bp | ATGGGTGAAACGGCCCCATGTTTAATGTTACCCAGAAGGGGACATGGCTTTCAGCTGCTGTCTGTAAAGTaGATGGAGATCATGTCAGAA | + |
|
Preference number: 5 (lower is better) Translates to: MGETAPCLMLPRRGHGFQLLSVK*MEIMSE Trigger: TTCTGACATGATCTCCATCAACTTTACAGACAGCAG...CTGAAAGCCATGTCCCCTTCTGGGTAACATTAAACATGGGGCCGTTTCACCCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021490.12 ENSMUST00000117053.8 ENSMUST00000118101.2 |
||
| CDS-3UTR CAA 90 bp | TCAGGCATGGGTGAAACGGCCCCATGTTTAATGTTACCCAGAAGGGGACATGGCCTAAATCAACCAACCTaGTCAATAATTGTCGTCTCA | + |
|
Preference number: 5 (lower is better) Translates to: SGMGETAPCLMLPRRGHGLNQPT*SIIVVS Trigger: TGAGACGACAATTATTGACAAGGTTGGTTGATTTAG...GCCATGTCCCCTTCTGGGTAACATTAAACATGGGGCCGTTTCACCCATGCCTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021490.12 ENSMUST00000117053.8 ENSMUST00000118101.2 |
||
| CDS-3UTR CAA 90 bp | CCCATGTTTAATGTTACCCAGAAGGGGACATGGCTTTCAGGAGAGAGGCTGATTCTAGTAGACTCATCATaGACTCCAAGTCATGGGTCT | + |
|
Preference number: 5 (lower is better) Translates to: PMFNVTQKGTWLSGERLILVDSS*TPSHGS Trigger: AGACCCATGACTTGGAGTCAATGATGAGTCTACTAG...AATCAGCCTCTCTCCTGAAAGCCATGTCCCCTTCTGGGTAACATTAAACATGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021490.12 ENSMUST00000117053.8 ENSMUST00000118101.2 |
||
| CDS TCA 90 bp | TCATCGATGGTCAGCACAGCCTTACTTACCACCTTGAAGGACTTCTaGAGTGTGTCATTCATGTCAGAGCTATTGGTGCCACTGTTGAAA | + |
|
Preference number: 5 (lower is better) Translates to: SSMVSTALLTTLKDF*SVSFMSELLVPLLK Trigger: TTTCAACAGTGGCACCAATAGCTCTGACATGAATGACACACTTCAGAAGTCCTTCAAGGTGGTAAGTAAGGCTGTGCTGACCATCGATGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021490.12 ENSMUST00000117053.8 ENSMUST00000118101.2 |
||
| CDS-3UTR CAA 90 bp | TTGCACTCAGGCATGGGTGAAACGGCCCCATGTTTAATGTTACCCAGAAGGGGATTTTCATGTTTAGTCTaGGTTATGAGAAGCAGACAG | + |
|
Preference number: 5 (lower is better) Translates to: LHSGMGETAPCLMLPRRGFSCLV*VMRSRQ Trigger: CTGTCTGCTTCTCATAACCAAGACTAAACATGAAAA...TCCCCTTCTGGGTAACATTAAACATGGGGCCGTTTCACCCATGCCTGAGTGCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000021490.12 ENSMUST00000117053.8 ENSMUST00000118101.2 |
||
| CDS-3UTR CAA 90 bp | CCCATGTTTAATGTTACCCAGAAGGGGACATGGCTTTCAGGAGAGAGGCTGATTCTGCTGTCTGTAAAGTaGATGGAGATCATGTCAGAA | + |
|
Preference number: 5 (lower is better) Translates to: PMFNVTQKGTWLSGERLILLSVK*MEIMSE Trigger: TTCTGACATGATCTCCATCAACTTTACAGACAGCAG...AATCAGCCTCTCTCCTGAAAGCCATGTCCCCTTCTGGGTAACATTAAACATGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021490.12 ENSMUST00000117053.8 ENSMUST00000118101.2 |
||
| CDS-3UTR CAA 90 bp | TTAAGTGTCCCCAGACAGCCCTGGCCAGTTTGTAAAAACACACTAGTTCCTGATCTAGTAGACTCATCATaGACTCCAAGTCATGGGTCT | + |
|
Preference number: 5 (lower is better) Translates to: LSVPRQPWPVCKNTLVPDLVDSS*TPSHGS Trigger: AGACCCATGACTTGGAGTCAATGATGAGTCTACTAG...ATCAGGAACTAGTGTGTTTTTACAAACTGGCCAGGGCTGTCTGGGGACACTTAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000117053.8 |
||
| CDS-3UTR CAA 90 bp | TGTTTGCACTCAGGCATGGGTGAAACGGCCCCATGTTTAATGTTACCCAGAAGGTTTTCATGTTTAGTCTaGGTTATGAGAAGCAGACAG | + |
|
Preference number: 5 (lower is better) Translates to: CLHSGMGETAPCLMLPRRFSCLV*VMRSRQ Trigger: CTGTCTGCTTCTCATAACCAAGACTAAACATGAAAA...CCTTCTGGGTAACATTAAACATGGGGCCGTTTCACCCATGCCTGAGTGCAAACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021490.12 ENSMUST00000117053.8 ENSMUST00000118101.2 |
||
| CDS TCA 72 bp | TTGTCATGCCGTATCCTAAGTGGTAGTCCTTCACTTTaGCGGACCGGCAGCCAAAGTTGCTGTCAAGTTTGG | + |
|
Preference number: 6 (lower is better) Translates to: LSCRILSGSPSL*RTGSQSCCQVW Trigger: CCAAACTTGACAGCAACTTTGGCTGCCGGTCCGTCAAAGTGAAGGACTACCACTTAGGATACGGCATGACAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021490.12 ENSMUST00000118101.2 |
||
| CDS CAA 72 bp | AGTTGGGCCATCTTTTTGAACAAGGTGATGGAGACATaGCAGATGGTAAGAGCCACCTTCCGGCACTGGAAG | + |
|
Preference number: 6 (lower is better) Translates to: SWAIFLNKVMET*QMVRATFRHWK Trigger: CTTCCAGTGCCGGAAGGTGGCTCTTACCATCTGCAATGTCTCCATCACCTTGTTCAAAAAGATGGCCCAACT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000021490.12 ENSMUST00000117053.8 ENSMUST00000118101.2 |
||
| CDS CAA 72 bp | GTCTGGTGGATGGAATGGAGCAGATACCAGAAACACTaGTGGATCTCCGCTTCAGGCAAGCCTGTTTTGTTG | + |
|
Preference number: 6 (lower is better) Translates to: VWWMEWSRYQKH*WISASGKPVLL Trigger: CAACAAAACAGGCTTGCCTGAAGCGGAGATCCACAAGTGTTTCTGGTATCTGCTCCATTCCATCCACCAGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021490.12 ENSMUST00000117053.8 ENSMUST00000118101.2 |
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| CDS CAA 90 bp | GGCTCTTCAGTCTGGTGGATGGAATGGAGCAGATACCAGAAACACTaGTGGATCTCCGCTTCAGGCAAGCCTGTTTTGTTGAACCTTAGA | + |
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Preference number: 6 (lower is better) Translates to: GSSVWWMEWSRYQKH*WISASGKPVLLNLR Trigger: TCTAAGGTTCAACAAAACAGGCTTGCCTGAAGCGGAGATCCACAAGTGTTTCTGGTATCTGCTCCATTCCATCCACCAGACTGAAGAGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021490.12 ENSMUST00000117053.8 ENSMUST00000118101.2 |
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| CDS CCA 72 bp | TGGTGGATGGAATGGAGCAGATACCAGAAACACTTGTaGATCTCCGCTTCAGGCAAGCCTGTTTTGTTGAAC | + |
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Preference number: 6 (lower is better) Translates to: WWMEWSRYQKHL*ISASGKPVLLN Trigger: GTTCAACAAAACAGGCTTGCCTGAAGCGGAGATCCACAAGTGTTTCTGGTATCTGCTCCATTCCATCCACCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021490.12 ENSMUST00000117053.8 ENSMUST00000118101.2 |
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| CDS CCA 72 bp | TGTAGTGATGATGGCTCTTCAGTCTGGTGGATGGAATaGAGCAGATACCAGAAACACTTGTGGATCTCCGCT | + |
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Preference number: 6 (lower is better) Translates to: CSDDGSSVWWME*SRYQKHLWISA Trigger: AGCGGAGATCCACAAGTGTTTCTGGTATCTGCTCCATTCCATCCACCAGACTGAAGAGCCATCATCACTACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021490.12 ENSMUST00000117053.8 ENSMUST00000118101.2 |
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| CDS TCA 72 bp | ACCACTCTGCCTAAAAAGAGGGGGACATCATTTGTGTaGTCCTGGATGAAGATGAGGAAAGGTCTGTTGAGC | + |
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Preference number: 6 (lower is better) Translates to: TTLPKKRGTSFV*SWMKMRKGLLS Trigger: GCTCAACAGACCTTTCCTCATCTTCATCCAGGATCACACAAATGATGTCCCCCTCTTTTTAGGCAGAGTGGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000021490.12 ENSMUST00000117053.8 ENSMUST00000118101.2 |
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| CDS CCA 72 bp | CTACCAGTTTGTAGTGATGATGGCTCTTCAGTCTGGTaGATGGAATGGAGCAGATACCAGAAACACTTGTGG | + |
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Preference number: 6 (lower is better) Translates to: LPVCSDDGSSVW*MEWSRYQKHLW Trigger: CCACAAGTGTTTCTGGTATCTGCTCCATTCCATCCACCAGACTGAAGAGCCATCATCACTACAAACTGGTAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021490.12 ENSMUST00000117053.8 ENSMUST00000118101.2 |
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| CDS CCA 72 bp | CTGCTACCAGTTTGTAGTGATGATGGCTCTTCAGTCTaGTGGATGGAATGGAGCAGATACCAGAAACACTTG | + |
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Preference number: 6 (lower is better) Translates to: LLPVCSDDGSSV*WMEWSRYQKHL Trigger: CAAGTGTTTCTGGTATCTGCTCCATTCCATCCACCAGACTGAAGAGCCATCATCACTACAAACTGGTAGCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021490.12 ENSMUST00000117053.8 ENSMUST00000118101.2 |
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| CDS CAA 72 bp | CTTAGAGTCTCCAGGATGTGTTTGCTTAAGTTGCCATaGGATCCCAGGGACAGCATTGAAATGGCAGCAATG | + |
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Preference number: 6 (lower is better) Translates to: LRVSRMCLLKLP*DPRDSIEMAAM Trigger: CATTGCTGCCATTTCAATGCTGTCCCTGGGATCCAATGGCAACTTAAGCAAACACATCCTGGAGACTCTAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021490.12 ENSMUST00000117053.8 ENSMUST00000118101.2 |
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| CDS TCA 72 bp | TTTCATCGATGGTCAGCACAGCCTTACTTACCACCTTaGAGGACTTCTGAAGTGTGTCATTCATGTCAGAGC | + |
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Preference number: 6 (lower is better) Translates to: FHRWSAQPYLPP*RTSEVCHSCQS Trigger: GCTCTGACATGAATGACACACTTCAGAAGTCCTTCAAGGTGGTAAGTAAGGCTGTGCTGACCATCGATGAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021490.12 ENSMUST00000117053.8 ENSMUST00000118101.2 |
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| CDS CCA 72 bp | CAGTTTGTAGTGATGATGGCTCTTCAGTCTGGTGGATaGAATGGAGCAGATACCAGAAACACTTGTGGATCT | + |
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Preference number: 6 (lower is better) Translates to: QFVVMMALQSGG*NGADTRNTCGS Trigger: AGATCCACAAGTGTTTCTGGTATCTGCTCCATTCCATCCACCAGACTGAAGAGCCATCATCACTACAAACTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021490.12 ENSMUST00000117053.8 ENSMUST00000118101.2 |
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| CDS TCA 72 bp | AGTAATGCATGGCCATGTTATGGATCATCGGTACCTTaGTTGTCATGCCGTATCCTAAGTGGTAGTCCTTCA | + |
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Preference number: 6 (lower is better) Translates to: SNAWPCYGSSVP*LSCRILSGSPS Trigger: TGAAGGACTACCACTTAGGATACGGCATGACAATCAAGGTACCGATGATCCATAACATGGCCATGCATTACT 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021490.12 ENSMUST00000118101.2 |
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| CDS CAA 72 bp | TTCACCACAGCCAGGAATGTATCACTCTCCAGGTTCTaGACAATGTTCACTATTTCCTTCTGGCTTTTCTCC | + |
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Preference number: 6 (lower is better) Translates to: FTTARNVSLSRF*TMFTISFWLFS Trigger: GGAGAAAAGCCAGAAGGAAATAGTGAACATTGTCAAGAACCTGGAGAGTGATACATTCCTGGCTGTGGTGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021490.12 ENSMUST00000117053.8 ENSMUST00000118101.2 |
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| CDS CAA 72 bp | ACAATGAGAGTTCTGGTATCTCTAAATCAACCAACCTaGTCAATAATTGTCGTCTCATCCGGCGGAAGTGTG | + |
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Preference number: 6 (lower is better) Translates to: TMRVLVSLNQPT*SIIVVSSGGSV Trigger: CACACTTCCGCCGGATGAGACGACAATTATTGACAAGGTTGGTTGATTTAGAGATACCAGAACTCTCATTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021490.12 ENSMUST00000117053.8 ENSMUST00000118101.2 |
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| CDS CCA 72 bp | CTGCTGTCTGTAAAGTTGATGGAGATCATGTCAGAATaGTATAGGTCCTTGACTCCTTTCACAAATTTGTCT | + |
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Preference number: 6 (lower is better) Translates to: LLSVKLMEIMSE*YRSLTPFTNLS Trigger: AGACAAATTTGTGAAAGGAGTCAAGGACCTATACCATTCTGACATGATCTCCATCAACTTTACAGACAGCAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021490.12 ENSMUST00000117053.8 ENSMUST00000118101.2 |
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| CDS CAA 72 bp | AAAATATTTCCATTTCCTGACAGTTGGGCCATCTTTTaGAACAAGGTGATGGAGACATTGCAGATGGTAAGA | + |
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Preference number: 6 (lower is better) Translates to: KIFPFPDSWAIF*NKVMETLQMVR Trigger: TCTTACCATCTGCAATGTCTCCATCACCTTGTTCAAAAAGATGGCCCAACTGTCAGGAAATGGAAATATTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021490.12 ENSMUST00000117053.8 ENSMUST00000118101.2 |
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