Pregenerated sensors for SERPINA1E (Mus musculus)

Ensembl gene IDs: ENSMUSG00000072849

Ensembl transcript IDs: ENSMUST00000085054.5, ENSMUST00000122229.8

Found 19 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS CCA 90 bp	AGACAGCAGTGGCGTTGCCCGCGTAATCCATCAGCAGCACCCAGCTaGAGAGCGTGCTGCAATGGTGCACGTCAAGCATGCCCGAGAGGG	+
Preference number: 5 (lower is better) Translates to: RQQWRCPRNPSAAPS*RACCNGARQACPRG Trigger: CCCTCTCGGGCATGCTTGACGTGCACCATTGCAGCACGCTCTCCAGCTGGGTGCTGCTGATGGATTACGCGGGCAACGCCACTGCTGTCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085054.5 ENSMUST00000122229.8
CDS GCA 90 bp	CGTTGCCCGCGTAATCCATCAGCAGCACCCAGCTGGAGAGCGTGCTaGAATGGTGCACGTCAAGCATGCCCGAGAGGGTCATCATGGGCA	+
Preference number: 5 (lower is better) Translates to: RCPRNPSAAPSWRAC*NGARQACPRGSSWA Trigger: TGCCCATGATGACCCTCTCGGGCATGCTTGACGTGCACCATTGCAGCACGCTCTCCAGCTGGGTGCTGCTGATGGATTACGCGGGCAACG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085054.5 ENSMUST00000122229.8
CDS GCA 90 bp	TGGCGTTGCCCGCGTAATCCATCAGCAGCACCCAGCTGGAGAGCGTaGTGCAATGGTGCACGTCAAGCATGCCCGAGAGGGTCATCATGG	+
Preference number: 5 (lower is better) Translates to: WRCPRNPSAAPSWRA*CNGARQACPRGSSW Trigger: CCATGATGACCCTCTCGGGCATGCTTGACGTGCACCATTGCAGCACGCTCTCCAGCTGGGTGCTGCTGATGGATTACGCGGGCAACGCCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085054.5 ENSMUST00000122229.8
CDS CCA 90 bp	ACTGATGGCAAAGTCTCCCAGGTTTGTAGCAATCTCATGGGAGGCTaGGGACTGATCCTTCTGGGAGGTGTCTGTCTCCTGAACATCCTC	+
Preference number: 5 (lower is better) Translates to: TDGKVSQVCSNLMGG*GLILLGGVCLLNIL Trigger: GAGGATGTTCAGGAGACAGACACCTCCCAGAAGGATCAGTCCCCAGCCTCCCATGAGATTGCTACAAACCTGGGAGACTTTGCCATCAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085054.5 ENSMUST00000122229.8
CDS GCA 90 bp	AGGAACTTAGAGATGAGCTCCTTGTTGAGAGTTTGCTCCAGATGCTaGATCTTCCCATCATCGGGCAGGAGGAAGACAGCAGTGGCGTTG	+
Preference number: 5 (lower is better) Translates to: RNLEMSSLLRVCSRC*IFPSSGRRKTAVAL Trigger: CAACGCCACTGCTGTCTTCCTCCTGCCCGATGATGGGAAGATGCAGCATCTGGAGCAAACTCTCAACAAGGAGCTCATCTCTAAGTTCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085054.5 ENSMUST00000122229.8
CDS CCA 90 bp	AGCTGCAGCTCACTGTCTGGTCTGTTGAGGGTTTGGAGGAGGTGTTaGAAGGAATTGTGGATGTCAGCCTCCGATGTTTGTGTGAGGTTG	+
Preference number: 5 (lower is better) Translates to: SCSSLSGLLRVWRRC*KELWMSASDVCVRL Trigger: CAACCTCACACAAACATCGGAGGCTGACATCCACAATTCCTTCCAACACCTCCTCCAAACCCTCAACAGACCAGACAGTGAGCTGCAGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085054.5 ENSMUST00000122229.8
CDS CCA 90 bp	CTCGTCCACGTGGAACTCAGCTTGCTTAGTGTTCTCAGGATCGAATaGCTTCTTCCATTTGCCTTTAAAGAGAATGTAATTTGCCAGGAC	+
Preference number: 5 (lower is better) Translates to: LVHVELSLLSVLRIE*LLPFAFKENVICQD Trigger: GTCCTGGCAAATTACATTCTCTTTAAAGGCAAATGGAAGAAGCCATTCGATCCTGAGAACACTAAGCAAGCTGAGTTCCACGTGGACGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085054.5 ENSMUST00000122229.8
CDS GCA 72 bp	CCGCGTAATCCATCAGCAGCACCCAGCTGGAGAGCGTaGTGCAATGGTGCACGTCAAGCATGCCCGAGAGGG	+
Preference number: 6 (lower is better) Translates to: PRNPSAAPSWRA*CNGARQACPRG Trigger: CCCTCTCGGGCATGCTTGACGTGCACCATTGCAGCACGCTCTCCAGCTGGGTGCTGCTGATGGATTACGCGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085054.5 ENSMUST00000122229.8
CDS GCA 72 bp	AGCTGGAGAGCGTGCTGCAATGGTGCACGTCAAGCATaGCCGAGAGGGTCATCATGGGCACCTTCACCGTGG	+
Preference number: 6 (lower is better) Translates to: SWRACCNGARQA*PRGSSWAPSPW Trigger: CCACGGTGAAGGTGCCCATGATGACCCTCTCGGGCATGCTTGACGTGCACCATTGCAGCACGCTCTCCAGCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085054.5 ENSMUST00000122229.8
CDS GCA 72 bp	ATCAGCAGCACCCAGCTGGAGAGCGTGCTGCAATGGTaGACGTCAAGCATGCCCGAGAGGGTCATCATGGGC	+
Preference number: 6 (lower is better) Translates to: ISSTQLESVLQW*TSSMPERVIMG Trigger: GCCCATGATGACCCTCTCGGGCATGCTTGACGTGCACCATTGCAGCACGCTCTCCAGCTGGGTGCTGCTGAT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085054.5 ENSMUST00000122229.8
CDS CCA 72 bp	TGGCGTTGCCCGCGTAATCCATCAGCAGCACCCAGCTaGAGAGCGTGCTGCAATGGTGCACGTCAAGCATGC	+
Preference number: 6 (lower is better) Translates to: WRCPRNPSAAPS*RACCNGARQAC Trigger: GCATGCTTGACGTGCACCATTGCAGCACGCTCTCCAGCTGGGTGCTGCTGATGGATTACGCGGGCAACGCCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085054.5 ENSMUST00000122229.8
CDS GCA 72 bp	CGTAATCCATCAGCAGCACCCAGCTGGAGAGCGTGCTaGAATGGTGCACGTCAAGCATGCCCGAGAGGGTCA	+
Preference number: 6 (lower is better) Translates to: RNPSAAPSWRAC*NGARQACPRGS Trigger: TGACCCTCTCGGGCATGCTTGACGTGCACCATTGCAGCACGCTCTCCAGCTGGGTGCTGCTGATGGATTACG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085054.5 ENSMUST00000122229.8
CDS CCA 72 bp	TCCATCAGCAGCACCCAGCTGGAGAGCGTGCTGCAATaGTGCACGTCAAGCATGCCCGAGAGGGTCATCATG	+
Preference number: 6 (lower is better) Translates to: SISSTQLESVLQ*CTSSMPERVIM Trigger: CATGATGACCCTCTCGGGCATGCTTGACGTGCACCATTGCAGCACGCTCTCCAGCTGGGTGCTGCTGATGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085054.5 ENSMUST00000122229.8
CDS GCA 72 bp	TCTGTTCCTGTCTCATCGATGGTCAGCACGGCCTTATaGACAGCCTGGCTGAGCTTCAGGGGAGCATTCTCC	+
Preference number: 6 (lower is better) Translates to: SVPVSSMVSTAL*TAWLSFRGAFS Trigger: GGAGAATGCTCCCCTGAAGCTCAGCCAGGCTGTGCATAAGGCCGTGCTGACCATCGATGAGACAGGAACAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085054.5 ENSMUST00000122229.8
CDS CCA 72 bp	AAAGTCTCCCAGGTTTGTAGCAATCTCATGGGAGGCTaGGGACTGATCCTTCTGGGAGGTGTCTGTCTCCTG	+
Preference number: 6 (lower is better) Translates to: KVSQVCSNLMGG*GLILLGGVCLL Trigger: CAGGAGACAGACACCTCCCAGAAGGATCAGTCCCCAGCCTCCCATGAGATTGCTACAAACCTGGGAGACTTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085054.5 ENSMUST00000122229.8
CDS CAA 72 bp	CTTCACCGTGGTGGACTCGTCCACGTGGAACTCAGCTaGCTTAGTGTTCTCAGGATCGAATGGCTTCTTCCA	+
Preference number: 6 (lower is better) Translates to: LHRGGLVHVELS*LSVLRIEWLLP Trigger: TGGAAGAAGCCATTCGATCCTGAGAACACTAAGCAAGCTGAGTTCCACGTGGACGAGTCCACCACGGTGAAG 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085054.5 ENSMUST00000122229.8
CDS CAA 90 bp	CAGCTGCAGCTCACTGTCTGGTCTGTTGAGGGTTTGGAGGAGGTGTaGGAAGGAATTGTGGATGTCAGCCTCCGATGTTTGTGTGAGGTT	+
Preference number: 6 (lower is better) Translates to: QLQLTVWSVEGLEEV*EGIVDVSLRCLCEV Trigger: AACCTCACACAAACATCGGAGGCTGACATCCACAATTCCTTCCAACACCTCCTCCAAACCCTCAACAGACCAGACAGTGAGCTGCAGCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085054.5 ENSMUST00000122229.8
CDS CCA 72 bp	GTCAGCCCCACTGTTGAAGATCCGGGTGATGCCCAGTaGACTCATGAGTGTCTCCAAGTTATAGTTTCCAGA	+
Preference number: 6 (lower is better) Translates to: VSPTVEDPGDAQ*THECLQVIVSR Trigger: TCTGGAAACTATAACTTGGAGACACTCATGAGTCCACTGGGCATCACCCGGATCTTCAACAGTGGGGCTGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085054.5 ENSMUST00000122229.8
CDS CCA 72 bp	TCACTGTCTGGTCTGTTGAGGGTTTGGAGGAGGTGTTaGAAGGAATTGTGGATGTCAGCCTCCGATGTTTGT	+
Preference number: 6 (lower is better) Translates to: SLSGLLRVWRRC*KELWMSASDVC Trigger: ACAAACATCGGAGGCTGACATCCACAATTCCTTCCAACACCTCCTCCAAACCCTCAACAGACCAGACAGTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085054.5 ENSMUST00000122229.8