Pregenerated sensors for SERPINA1B (Mus musculus)
Ensembl gene IDs: ENSMUSG00000071178Ensembl transcript IDs: ENSMUST00000095450.11, ENSMUST00000164454.3, ENSMUST00000186166.7
Found 16 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | AGACAGCACTGGCGTTGCCCGCGTAATCCATCAGCAGCACCCAGCTaGACAGTATGCTGCAATGGTGCACATCAAGCATGCCCGAGAGCA | + |
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Preference number: 5 (lower is better) Translates to: RQHWRCPRNPSAAPS*TVCCNGAHQACPRA Trigger: TGCTCTCGGGCATGCTTGATGTGCACCATTGCAGCATACTGTCCAGCTGGGTGCTGCTGATGGATTACGCGGGCAACGCCAGTGCTGTCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000095450.11 ENSMUST00000164454.3 ENSMUST00000186166.7 |
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| CDS GCA 90 bp | CGTTGCCCGCGTAATCCATCAGCAGCACCCAGCTGGACAGTATGCTaGAATGGTGCACATCAAGCATGCCCGAGAGCATCATCATGGGCA | + |
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Preference number: 5 (lower is better) Translates to: RCPRNPSAAPSWTVC*NGAHQACPRASSWA Trigger: TGCCCATGATGATGCTCTCGGGCATGCTTGATGTGCACCATTGCAGCATACTGTCCAGCTGGGTGCTGCTGATGGATTACGCGGGCAACG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000095450.11 ENSMUST00000164454.3 ENSMUST00000186166.7 |
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| CDS GCA 90 bp | TGGCGTTGCCCGCGTAATCCATCAGCAGCACCCAGCTGGACAGTATaGTGCAATGGTGCACATCAAGCATGCCCGAGAGCATCATCATGG | + |
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Preference number: 5 (lower is better) Translates to: WRCPRNPSAAPSWTV*CNGAHQACPRASSW Trigger: CCATGATGATGCTCTCGGGCATGCTTGATGTGCACCATTGCAGCATACTGTCCAGCTGGGTGCTGCTGATGGATTACGCGGGCAACGCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000095450.11 ENSMUST00000164454.3 ENSMUST00000186166.7 |
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| CDS GCA 72 bp | CCGCGTAATCCATCAGCAGCACCCAGCTGGACAGTATaGTGCAATGGTGCACATCAAGCATGCCCGAGAGCA | + |
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Preference number: 6 (lower is better) Translates to: PRNPSAAPSWTV*CNGAHQACPRA Trigger: TGCTCTCGGGCATGCTTGATGTGCACCATTGCAGCATACTGTCCAGCTGGGTGCTGCTGATGGATTACGCGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000095450.11 ENSMUST00000164454.3 ENSMUST00000186166.7 |
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| CDS CCA 72 bp | TGGCGTTGCCCGCGTAATCCATCAGCAGCACCCAGCTaGACAGTATGCTGCAATGGTGCACATCAAGCATGC | + |
|
Preference number: 6 (lower is better) Translates to: WRCPRNPSAAPS*TVCCNGAHQAC Trigger: GCATGCTTGATGTGCACCATTGCAGCATACTGTCCAGCTGGGTGCTGCTGATGGATTACGCGGGCAACGCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000095450.11 ENSMUST00000164454.3 ENSMUST00000186166.7 |
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| CDS GCA 72 bp | AGCTGGACAGTATGCTGCAATGGTGCACATCAAGCATaGCCGAGAGCATCATCATGGGCACCTTCACCGTGG | + |
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Preference number: 6 (lower is better) Translates to: SWTVCCNGAHQA*PRASSWAPSPW Trigger: CCACGGTGAAGGTGCCCATGATGATGCTCTCGGGCATGCTTGATGTGCACCATTGCAGCATACTGTCCAGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000095450.11 ENSMUST00000164454.3 ENSMUST00000186166.7 |
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| CDS GCA 72 bp | ATCAGCAGCACCCAGCTGGACAGTATGCTGCAATGGTaGACATCAAGCATGCCCGAGAGCATCATCATGGGC | + |
|
Preference number: 6 (lower is better) Translates to: ISSTQLDSMLQW*TSSMPESIIMG Trigger: GCCCATGATGATGCTCTCGGGCATGCTTGATGTGCACCATTGCAGCATACTGTCCAGCTGGGTGCTGCTGAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000095450.11 ENSMUST00000164454.3 ENSMUST00000186166.7 |
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| CDS GCA 72 bp | CGTAATCCATCAGCAGCACCCAGCTGGACAGTATGCTaGAATGGTGCACATCAAGCATGCCCGAGAGCATCA | + |
|
Preference number: 6 (lower is better) Translates to: RNPSAAPSWTVC*NGAHQACPRAS Trigger: TGATGCTCTCGGGCATGCTTGATGTGCACCATTGCAGCATACTGTCCAGCTGGGTGCTGCTGATGGATTACG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000095450.11 ENSMUST00000164454.3 ENSMUST00000186166.7 |
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| CDS CCA 72 bp | TCCATCAGCAGCACCCAGCTGGACAGTATGCTGCAATaGTGCACATCAAGCATGCCCGAGAGCATCATCATG | + |
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Preference number: 6 (lower is better) Translates to: SISSTQLDSMLQ*CTSSMPESIIM Trigger: CATGATGATGCTCTCGGGCATGCTTGATGTGCACCATTGCAGCATACTGTCCAGCTGGGTGCTGCTGATGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000095450.11 ENSMUST00000164454.3 ENSMUST00000186166.7 |
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| CDS GCA 72 bp | GAGATGAGCTCCTTGTTGAGAGTTTGCTCCAGATGCTaGATCTTCCCATCTTCGGGCAGGAGGAAGACAGCA | + |
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Preference number: 6 (lower is better) Translates to: EMSSLLRVCSRC*IFPSSGRRKTA Trigger: TGCTGTCTTCCTCCTGCCCGAAGATGGGAAGATGCAGCATCTGGAGCAAACTCTCAACAAGGAGCTCATCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000095450.11 ENSMUST00000164454.3 ENSMUST00000186166.7 |
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| CDS CAA 90 bp | AACCTTCTGCGCCTGTTTAGCAGGATCTTAGAGATGAGCTCCTTGTaGAGAGTTTGCTCCAGATGCTGCATCTTCCCATCTTCGGGCAGG | + |
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Preference number: 6 (lower is better) Translates to: NLLRLFSRILEMSSL*RVCSRCCIFPSSGR Trigger: CCTGCCCGAAGATGGGAAGATGCAGCATCTGGAGCAAACTCTCAACAAGGAGCTCATCTCTAAGATCCTGCTAAACAGGCGCAGAAGGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000095450.11 ENSMUST00000164454.3 ENSMUST00000186166.7 |
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| CDS GCA 72 bp | GGGCATAGACATAGGAACGGCTTCAAAGACTGTAGCTaGTGCAGCTTCTGTTCCTGTCTCATCGATGGTCAG | + |
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Preference number: 6 (lower is better) Translates to: GHRHRNGFKDCS*CSFCSCLIDGQ Trigger: CTGACCATCGATGAGACAGGAACAGAAGCTGCAGCAGCTACAGTCTTTGAAGCCGTTCCTATGTCTATGCCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000095450.11 ENSMUST00000164454.3 ENSMUST00000186166.7 |
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| CDS CAA 90 bp | ACTAACCTTCTGCGCCTGTTTAGCAGGATCTTAGAGATGAGCTCCTaGTTGAGAGTTTGCTCCAGATGCTGCATCTTCCCATCTTCGGGC | + |
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Preference number: 6 (lower is better) Translates to: TNLLRLFSRILEMSS*LRVCSRCCIFPSSG Trigger: GCCCGAAGATGGGAAGATGCAGCATCTGGAGCAAACTCTCAACAAGGAGCTCATCTCTAAGATCCTGCTAAACAGGCGCAGAAGGTTAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000095450.11 ENSMUST00000164454.3 ENSMUST00000186166.7 |
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| CDS GCA 72 bp | CATAGACATAGGAACGGCTTCAAAGACTGTAGCTGCTaGAGCTTCTGTTCCTGTCTCATCGATGGTCAGCAC | + |
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Preference number: 6 (lower is better) Translates to: HRHRNGFKDCSC*SFCSCLIDGQH Trigger: GTGCTGACCATCGATGAGACAGGAACAGAAGCTGCAGCAGCTACAGTCTTTGAAGCCGTTCCTATGTCTATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000095450.11 ENSMUST00000164454.3 ENSMUST00000186166.7 |
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| CDS CCA 72 bp | GTGTCTTCAAGTTATAGTCTCCAGAGATGGACAGTCTaGGGATATGGATCTGGACTAACCTTCTGCGCCTGT | + |
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Preference number: 6 (lower is better) Translates to: VSSSYSLQRWTV*GYGSGLTFCAC Trigger: ACAGGCGCAGAAGGTTAGTCCAGATCCATATCCCCAGACTGTCCATCTCTGGAGACTATAACTTGAAGACAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000095450.11 ENSMUST00000164454.3 ENSMUST00000186166.7 |
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| CDS CAA 72 bp | TTGGTCCAGTTCTTTCACTGCCTCAACTATCTTTCCTaGGGTTCCCTTCTCCACAAAATCATTAATCACTTT | + |
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Preference number: 6 (lower is better) Translates to: LVQFFHCLNYLS*GSLLHKIINHF Trigger: AAAGTGATTAATGATTTTGTGGAGAAGGGAACCCAAGGAAAGATAGTTGAGGCAGTGAAAGAACTGGACCAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000095450.11 ENSMUST00000164454.3 ENSMUST00000186166.7 |
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