Pregenerated sensors for SERPINA12 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000041567Ensembl transcript IDs: ENSMUST00000043915.4
Found 162 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GGCCTGCACAGGCTATTCACAGCCAGAGGGATAAAGGCATCCCTCTaGGCTCCAGACCCACACCATTGGTCTGGCCCTTGGTGCCCCCTA | + |
|
Preference number: 1 (lower is better) Translates to: GLHRLFTARGIKASL*APDPHHWSGPWCPL Trigger: TAGGGGGCACCAAGGGCCAGACCAATGGTGTGGGTCTGGAGCGCAGAGGGATGCCTTTATCCCTCTGGCTGTGAATAGCCTGTGCAGGCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043915.4 |
||
| 3UTR CCA 90 bp | TCCCGGAGGTCTAGCTGGGCTAGCACCAACCCTACCTGGACACTCTaGGAGGTGAGCCATGTAACACGCATGCCAGAGTTCTCAGCCTGG | + |
|
Preference number: 1 (lower is better) Translates to: SRRSSWASTNPTWTL*EVSHVTRMPEFSAW Trigger: CCAGGCTGAGAACTCTGGCATGCGTGTTACATGGCTCACCTCCCAGAGTGTCCAGGTAGGGTTGGTGCTAGCCCAGCTAGACCTCCGGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043915.4 |
||
| 3UTR CCA 90 bp | CCACCGTGTTCCCGGAGGTCTAGCTGGGCTAGCACCAACCCTACCTaGACACTCTGGGAGGTGAGCCATGTAACACGCATGCCAGAGTTC | + |
|
Preference number: 1 (lower is better) Translates to: PPCSRRSSWASTNPT*TLWEVSHVTRMPEF Trigger: GAACTCTGGCATGCGTGTTACATGGCTCACCTCCCAGAGTGTCCAGGTAGGGTTGGTGCTAGCCCAGCTAGACCTCCGGGAACACGGTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043915.4 |
||
| 3UTR CCA 90 bp | ACAGAGCACAAAGTCCCTAGAGGAAGCTGGGCTGCTGGGCCGTGTTaGGACTCCATAACACTTGGTCCCTGGTGGGTGGCATTGTTTGGA | + |
|
Preference number: 1 (lower is better) Translates to: TEHKVPRGSWAAGPC*DSITLGPWWVALFG Trigger: TCCAAACAATGCCACCCACCAGGGACCAAGTGTTATGGAGTCCCAACACGGCCCAGCAGCCCAGCTTCCTCTAGGGACTTTGTGCTCTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043915.4 |
||
| 3UTR CCA 90 bp | TACATGCATTGGCTCTGGCTCCAGCTGGGCCACTCAGCGGATCAGTaGCTAACGTGGCCGTGCCTCATGAGCAGCACCACGACTTATAAA | + |
|
Preference number: 1 (lower is better) Translates to: YMHWLWLQLGHSADQ*LTWPCLMSSTTTYK Trigger: TTTATAAGTCGTGGTGCTGCTCATGAGGCACGGCCACGTTAGCCACTGATCCGCTGAGTGGCCCAGCTGGAGCCAGAGCCAATGCATGTA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043915.4 |
||
| 3UTR TCA 90 bp | AAGAAAGGCTGCTTGAGTGATACCGAGGAAGAGGATGGAAGCCTGTaGAGAGGTAAGAACGGAGGGCGAGTAGGGACTCATCAGGAGAAG | + |
|
Preference number: 1 (lower is better) Translates to: KKGCLSDTEEEDGSL*RGKNGGRVGTHQEK Trigger: CTTCTCCTGATGAGTCCCTACTCGCCCTCCGTTCTTACCTCTTCACAGGCTTCCATCCTCTTCCTCGGTATCACTCAAGCAGCCTTTCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043915.4 |
||
| 3UTR TCA 90 bp | GTGGAGACTGTAGACATGAGCTTAACTGTAGCCCATGGTGTGCTCTaGCTGACTTCAGCTCAAGTGGAAGGAGAGGGGACAGACACACAG | + |
|
Preference number: 1 (lower is better) Translates to: VETVDMSLTVAHGVL*LTSAQVEGEGTDTQ Trigger: CTGTGTGTCTGTCCCCTCTCCTTCCACTTGAGCTGAAGTCAGTCAGAGCACACCATGGGCTACAGTTAAGCTCATGTCTACAGTCTCCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043915.4 |
||
| 3UTR TCA 90 bp | GGAGGTGGAGTTTATCACATCACAGACACTCCCTGCCTTCAGGGATaGAGGAGATGTGGGCATAGTGGGAGTAAAGGTTGGCATTTGGTC | + |
|
Preference number: 1 (lower is better) Translates to: GGGVYHITDTPCLQG*RRCGHSGSKGWHLV Trigger: GACCAAATGCCAACCTTTACTCCCACTATGCCCACATCTCCTTCATCCCTGAAGGCAGGGAGTGTCTGTGATGTGATAAACTCCACCTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043915.4 |
||
| 3UTR TCA 90 bp | CTAACGTGGCCGTGCCTCATGAGCAGCACCACGACTTATAAACTGTaGTGTAGTAAATTGCTCAAGGGGAGCTCAGCCTCTGATCCACTG | + |
|
Preference number: 1 (lower is better) Translates to: LTWPCLMSSTTTYKL*CSKLLKGSSASDPL Trigger: CAGTGGATCAGAGGCTGAGCTCCCCTTGAGCAATTTACTACATCACAGTTTATAAGTCGTGGTGCTGCTCATGAGGCACGGCCACGTTAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043915.4 |
||
| 3UTR CCA 90 bp | CTCTGGGAGGTGAGCCATGTAACACGCATGCCAGAGTTCTCAGCCTaGAACTCACAATGGAAAACGAATTCTGCAAGGAATTGGCACCGA | + |
|
Preference number: 1 (lower is better) Translates to: LWEVSHVTRMPEFSA*NSQWKTNSARNWHR Trigger: TCGGTGCCAATTCCTTGCAGAATTCGTTTTCCATTGTGAGTTCCAGGCTGAGAACTCTGGCATGCGTGTTACATGGCTCACCTCCCAGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043915.4 |
||
| 3UTR CCA 90 bp | TGTGATGTAGTAAATTGCTCAAGGGGAGCTCAGCCTCTGATCCACTaGTTTCTCCCCAACTCCTACTTCCACCCAGGTAAGCAGCTGACT | + |
|
Preference number: 1 (lower is better) Translates to: CDVVNCSRGAQPLIH*FLPNSYFHPGKQLT Trigger: AGTCAGCTGCTTACCTGGGTGGAAGTAGGAGTTGGGGAGAAACCAGTGGATCAGAGGCTGAGCTCCCCTTGAGCAATTTACTACATCACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043915.4 |
||
| 3UTR GCA 90 bp | TTTCCTTTCTGGGGTCCTGAAATAGGATCTGACTGTCCTGCCATGTaGTTTCCTGTACCTCAGGGAGCCGTTTCTATGGTTAGTGGAGAC | + |
|
Preference number: 1 (lower is better) Translates to: FPFWGPEIGSDCPAM*FPVPQGAVSMVSGD Trigger: GTCTCCACTAACCATAGAAACGGCTCCCTGAGGTACAGGAAAGCACATGGCAGGACAGTCAGATCCTATTTCAGGACCCCAGAAAGGAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043915.4 |
||
| 3UTR GCA 90 bp | CATGCCAGAGTTCTCAGCCTGGAACTCACAATGGAAAACGAATTCTaGAAGGAATTGGCACCGATTTCCTCAACGCCTCATCAAGGAGCA | + |
|
Preference number: 1 (lower is better) Translates to: HARVLSLELTMENEF*KELAPISSTPHQGA Trigger: TGCTCCTTGATGAGGCGTTGAGGAAATCGGTGCCAATTCCTTGCAGAATTCGTTTTCCATTGTGAGTTCCAGGCTGAGAACTCTGGCATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043915.4 |
||
| 3UTR CCA 90 bp | TTCTCAGCCTGGAACTCACAATGGAAAACGAATTCTGCAAGGAATTaGCACCGATTTCCTCAACGCCTCATCAAGGAGCAGGGCAATCCT | + |
|
Preference number: 1 (lower is better) Translates to: FSAWNSQWKTNSARN*HRFPQRLIKEQGNP Trigger: AGGATTGCCCTGCTCCTTGATGAGGCGTTGAGGAAATCGGTGCCAATTCCTTGCAGAATTCGTTTTCCATTGTGAGTTCCAGGCTGAGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043915.4 |
||
| 3UTR CCA 90 bp | AGCCATGTAACACGCATGCCAGAGTTCTCAGCCTGGAACTCACAATaGAAAACGAATTCTGCAAGGAATTGGCACCGATTTCCTCAACGC | + |
|
Preference number: 1 (lower is better) Translates to: SHVTRMPEFSAWNSQ*KTNSARNWHRFPQR Trigger: GCGTTGAGGAAATCGGTGCCAATTCCTTGCAGAATTCGTTTTCCATTGTGAGTTCCAGGCTGAGAACTCTGGCATGCGTGTTACATGGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043915.4 |
||
| 3UTR GCA 90 bp | GCCTCTCTAAGCTTCATTTCCTCCACAAGGCTTGCTCATTCTGGTTaGCTATTGAGCTTTAGTGAACAAAGCACGAAGGTCACGGTGTTC | + |
|
Preference number: 1 (lower is better) Translates to: ASLSFISSTRLAHSG*LLSFSEQSTKVTVF Trigger: GAACACCGTGACCTTCGTGCTTTGTTCACTAAAGCTCAATAGGCAACCAGAATGAGCAAGCCTTGTGGAGGAAATGAAGCTTAGAGAGGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043915.4 |
||
| 3UTR TCA 90 bp | GTATTTTTATACCCATGGCTTCACACATACTGGGCAAACACTATCTaGCTGAGCCCTATAATTGGAATCAGGGGTTATAATTGTGTTGGT | + |
|
Preference number: 1 (lower is better) Translates to: VFLYPWLHTYWANTI*LSPIIGIRGYNCVG Trigger: ACCAACACAATTATAACCCCTGATTCCAATTATAGGGCTCAGTCAGATAGTGTTTGCCCAGTATGTGTGAAGCCATGGGTATAAAAATAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000043915.4 |
||
| 3UTR-3UTR TCA 90 bp | TGGCTCTGGCTCCAGCTGGGCCACTCAGCGGATCAGTGGCTAACGTGGCCGTGCGATGGCGGAAAGAGGTaGTTGCTGGCCTCTCATTGG | + |
|
Preference number: 2 (lower is better) Translates to: WLWLQLGHSADQWLTWPCDGGKR*LLASHW Trigger: CCAATGAGAGGCCAGCAATCACCTCTTTCCGCCATC...GCACGGCCACGTTAGCCACTGATCCGCTGAGTGGCCCAGCTGGAGCCAGAGCCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043915.4 |
||
| 3UTR CAA 90 bp | ACCTGGTCCCCGGAGGCATCCATCACTATTCCCTCGGTACATGCATaGGCTCTGGCTCCAGCTGGGCCACTCAGCGGATCAGTGGCTAAC | + |
|
Preference number: 2 (lower is better) Translates to: TWSPEASITIPSVHA*ALAPAGPLSGSVAN Trigger: GTTAGCCACTGATCCGCTGAGTGGCCCAGCTGGAGCCAGAGCCAATGCATGTACCGAGGGAATAGTGATGGATGCCTCCGGGGACCAGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043915.4 |
||
| 3UTR-3UTR CCA 90 bp | TGGCTCTGGCTCCAGCTGGGCCACTCAGCGGATCAGTGGCTAACGTGGCCGTGCGTAAAGGTTGGCATTTaGTCCAGGAGTGCTGATGGC | + |
|
Preference number: 2 (lower is better) Translates to: WLWLQLGHSADQWLTWPCVKVGI*SRSADG Trigger: GCCATCAGCACTCCTGGACCAAATGCCAACCTTTAC...GCACGGCCACGTTAGCCACTGATCCGCTGAGTGGCCCAGCTGGAGCCAGAGCCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043915.4 |
||
| 3UTR CAA 90 bp | AGCCAGAGGGATAAAGGCATCCCTCTGCGCTCCAGACCCACACCATaGGTCTGGCCCTTGGTGCCCCCTAGTGGCAGTAAGTTGACACCA | + |
|
Preference number: 2 (lower is better) Translates to: SQRDKGIPLRSRPTP*VWPLVPPSGSKLTP Trigger: TGGTGTCAACTTACTGCCACTAGGGGGCACCAAGGGCCAGACCAATGGTGTGGGTCTGGAGCGCAGAGGGATGCCTTTATCCCTCTGGCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043915.4 |
||
| 3UTR-3UTR CCA 90 bp | ATGCTGGGTCACTTCCACCGTGTTCCCGGAGGTCTAGCTGGGCTAGCACCAACCGCTGCTGGGCCGTGTTaGGACTCCATAACACTTGGT | + |
|
Preference number: 2 (lower is better) Translates to: MLGHFHRVPGGLAGLAPTAAGPC*DSITLG Trigger: ACCAAGTGTTATGGAGTCCCAACACGGCCCAGCAGC...GGTTGGTGCTAGCCCAGCTAGACCTCCGGGAACACGGTGGAAGTGACCCAGCAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043915.4 |
||
| 3UTR-3UTR TCA 90 bp | TGGCTCTGGCTCCAGCTGGGCCACTCAGCGGATCAGTGGCTAACGTGGCCGTGCTGTGACCGAAAGAAATaGACAAATCTGGCAGCGATC | + |
|
Preference number: 2 (lower is better) Translates to: WLWLQLGHSADQWLTWPCCDRKK*TNLAAI Trigger: GATCGCTGCCAGATTTGTTCATTTCTTTCGGTCACA...GCACGGCCACGTTAGCCACTGATCCGCTGAGTGGCCCAGCTGGAGCCAGAGCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043915.4 |
||
| 3UTR CAA 90 bp | GGGCCGTGTTGGGACTCCATAACACTTGGTCCCTGGTGGGTGGCATaGTTTGGAGAGGTTTTGGAGGTGCAACCCTTGGAAATGGGTGGG | + |
|
Preference number: 2 (lower is better) Translates to: GPCWDSITLGPWWVA*FGEVLEVQPLEMGG Trigger: CCCACCCATTTCCAAGGGTTGCACCTCCAAAACCTCTCCAAACAATGCCACCCACCAGGGACCAAGTGTTATGGAGTCCCAACACGGCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043915.4 |
||
| 3UTR-3UTR TCA 90 bp | GCAATCCTCACGTCAGAAAGGGAGGCAGAGAGGTTCCAAAATGAGACCCGTGGCCCCTGCCTTCAGGGATaGAGGAGATGTGGGCATAGT | + |
|
Preference number: 2 (lower is better) Translates to: AILTSEREAERFQNETRGPCLQG*RRCGHS Trigger: ACTATGCCCACATCTCCTTCATCCCTGAAGGCAGGG...GCCACGGGTCTCATTTTGGAACCTCTCTGCCTCCCTTTCTGACGTGAGGATTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043915.4 |
||
| 3UTR-3UTR CCA 90 bp | GCAATCCTCACGTCAGAAAGGGAGGCAGAGAGGTTCCAAAATGAGACCCGTGGCTGGAGGTGCAACCCTTaGAAATGGGTGGGGTCTGAA | + |
|
Preference number: 2 (lower is better) Translates to: AILTSEREAERFQNETRGWRCNP*KWVGSE Trigger: TTCAGACCCCACCCATTTCCAAGGGTTGCACCTCCA...GCCACGGGTCTCATTTTGGAACCTCTCTGCCTCCCTTTCTGACGTGAGGATTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043915.4 |
||
| 3UTR-3UTR CCA 90 bp | AAACTTTCTGCTCACCCGGTCGTTCCCAGACCTCTCCACAGGCCTGGCCTCCGATGTTTGGAGAGGTTTTaGAGGTGCAACCCTTGGAAA | + |
|
Preference number: 2 (lower is better) Translates to: KLSAHPVVPRPLHRPGLRCLERF*RCNPWK Trigger: TTTCCAAGGGTTGCACCTCCAAAACCTCTCCAAACA...TCGGAGGCCAGGCCTGTGGAGAGGTCTGGGAACGACCGGGTGAGCAGAAAGTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043915.4 |
||
| 3UTR-3UTR CCA 90 bp | TGTAGACATGAGCTTAACTGTAGCCCATGGTGTGCTCTGACTGACTTCAGCTCAGTCCCTAGAGGAAGCTaGGCTGCTGGGCCGTGTTGG | + |
|
Preference number: 2 (lower is better) Translates to: CRHELNCSPWCALTDFSSVPRGS*AAGPCW Trigger: CCAACACGGCCCAGCAGCCCAGCTTCCTCTAGGGAC...TGAGCTGAAGTCAGTCAGAGCACACCATGGGCTACAGTTAAGCTCATGTCTACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043915.4 |
||
| 3UTR-3UTR CCA 90 bp | GCGGATCAGTGGCTAACGTGGCCGTGCCTCATGAGCAGCACCACGACTTATAAATCGGTTCACTGTCTGTaGCTCCCATTTCCCTCTGAG | + |
|
Preference number: 2 (lower is better) Translates to: ADQWLTWPCLMSSTTTYKSVHCL*LPFPSE Trigger: CTCAGAGGGAAATGGGAGCCACAGACAGTGAACCGA...TTTATAAGTCGTGGTGCTGCTCATGAGGCACGGCCACGTTAGCCACTGATCCGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043915.4 |
||
| 3UTR-3UTR CCA 90 bp | ATCCCTCTGCGCTCCAGACCCACACCATTGGTCTGGCCCTTGGTGCCCCCTAGTAGAAATGAACAAATCTaGCAGCGATCTCCAGCTTCA | + |
|
Preference number: 2 (lower is better) Translates to: IPLRSRPTPLVWPLVPPSRNEQI*QRSPAS Trigger: TGAAGCTGGAGATCGCTGCCAGATTTGTTCATTTCT...ACTAGGGGGCACCAAGGGCCAGACCAATGGTGTGGGTCTGGAGCGCAGAGGGAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043915.4 |
||
| 3UTR-3UTR TCA 90 bp | AGGAAGCCGAGTCGCCTCTCTAAGCTTCATTTCCTCCACAAGGCTTGCTCATTCGAAATGGGTGGGGTCTaGAGCCAACAGGGAATGCTC | + |
|
Preference number: 2 (lower is better) Translates to: RKPSRLSKLHFLHKACSFEMGGV*SQQGML Trigger: GAGCATTCCCTGTTGGCTTCAGACCCCACCCATTTC...GAATGAGCAAGCCTTGTGGAGGAAATGAAGCTTAGAGAGGCGACTCGGCTTCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043915.4 |
||
| 3UTR-3UTR CCA 90 bp | TGTAGACATGAGCTTAACTGTAGCCCATGGTGTGCTCTGACTGACTTCAGCTCACCTCGGTACATGCATTaGCTCTGGCTCCAGCTGGGC | + |
|
Preference number: 2 (lower is better) Translates to: CRHELNCSPWCALTDFSSPRYMH*LWLQLG Trigger: GCCCAGCTGGAGCCAGAGCCAATGCATGTACCGAGG...TGAGCTGAAGTCAGTCAGAGCACACCATGGGCTACAGTTAAGCTCATGTCTACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043915.4 |
||
| 3UTR-3UTR TCA 90 bp | TGTAGACATGAGCTTAACTGTAGCCCATGGTGTGCTCTGACTGACTTCAGCTCATTGGTCCAGGAGTGCTaGTGGCTTGGGAGAGGCTAT | + |
|
Preference number: 2 (lower is better) Translates to: CRHELNCSPWCALTDFSSLVQEC*WLGRGY Trigger: ATAGCCTCTCCCAAGCCATCAGCACTCCTGGACCAA...TGAGCTGAAGTCAGTCAGAGCACACCATGGGCTACAGTTAAGCTCATGTCTACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043915.4 |
||
| 3UTR-3UTR TCA 90 bp | TGTAGACATGAGCTTAACTGTAGCCCATGGTGTGCTCTGACTGACTTCAGCTCATCAGACTGGAGGAGGTaGCAGAAGACGGTAACCAGG | + |
|
Preference number: 2 (lower is better) Translates to: CRHELNCSPWCALTDFSSSDWRR*QKTVTR Trigger: CCTGGTTACCGTCTTCTGTCACCTCCTCCAGTCTGA...TGAGCTGAAGTCAGTCAGAGCACACCATGGGCTACAGTTAAGCTCATGTCTACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043915.4 |
||
| 3UTR-3UTR CCA 90 bp | GGCCATCTCAGACTGGAGGAGGTGACAGAAGACGGTAACCAGGGTCTTAAGGTAGGGAGAGGCTATAAATaGGTACAGAGCACAAAGTCC | + |
|
Preference number: 2 (lower is better) Translates to: GHLRLEEVTEDGNQGLKVGRGYK*VQSTKS Trigger: GGACTTTGTGCTCTGTACCCATTTATAGCCTCTCCC...TACCTTAAGACCCTGGTTACCGTCTTCTGTCACCTCCTCCAGTCTGAGATGGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043915.4 |
||
| 3UTR CAA 90 bp | GTTCTCAGCCTGGAACTCACAATGGAAAACGAATTCTGCAAGGAATaGGCACCGATTTCCTCAACGCCTCATCAAGGAGCAGGGCAATCC | + |
|
Preference number: 2 (lower is better) Translates to: VLSLELTMENEFCKE*APISSTPHQGAGQS Trigger: GGATTGCCCTGCTCCTTGATGAGGCGTTGAGGAAATCGGTGCCAATTCCTTGCAGAATTCGTTTTCCATTGTGAGTTCCAGGCTGAGAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043915.4 |
||
| 3UTR-3UTR GCA 90 bp | GGTAACCAGGGTCTTAAGGTAGAATCTCACGGAATGCTTCTAGTCTACCTGGTCATAAAGGCATCCCTCTaGGCTCCAGACCCACACCAT | + |
|
Preference number: 2 (lower is better) Translates to: GNQGLKVESHGMLLVYLVIKASL*APDPHH Trigger: ATGGTGTGGGTCTGGAGCGCAGAGGGATGCCTTTAT...GACCAGGTAGACTAGAAGCATTCCGTGAGATTCTACCTTAAGACCCTGGTTACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043915.4 |
||
| 3UTR-3UTR CCA 90 bp | CTCAGCCTGGAACTCACAATGGAAAACGAATTCTGCAAGGAATTGGCACCGATTACACTTGGTCCCTGGTaGGTGGCATTGTTTGGAGAG | + |
|
Preference number: 2 (lower is better) Translates to: LSLELTMENEFCKELAPITLGPW*VALFGE Trigger: CTCTCCAAACAATGCCACCCACCAGGGACCAAGTGT...AATCGGTGCCAATTCCTTGCAGAATTCGTTTTCCATTGTGAGTTCCAGGCTGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043915.4 |
||
| 3UTR-3UTR GCA 90 bp | AGGAAGCCGAGTCGCCTCTCTAAGCTTCATTTCCTCCACAAGGCTTGCTCATTCGCAAGAAGTGACAATTaGTGCTTTAAAGGTACCAAG | + |
|
Preference number: 2 (lower is better) Translates to: RKPSRLSKLHFLHKACSFARSDN*CFKGTK Trigger: CTTGGTACCTTTAAAGCAGCAATTGTCACTTCTTGC...GAATGAGCAAGCCTTGTGGAGGAAATGAAGCTTAGAGAGGCGACTCGGCTTCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043915.4 |
||
| 3UTR-3UTR TCA 90 bp | GACGGTAACCAGGGTCTTAAGGTAGAATCTCACGGAATGCTTCTAGTCTACCTGATTCTGGTTGCCTATTaGGCTTTAGTGAACAAAGCA | + |
|
Preference number: 2 (lower is better) Translates to: DGNQGLKVESHGMLLVYLILVAY*ALVNKA Trigger: TGCTTTGTTCACTAAAGCTCAATAGGCAACCAGAAT...CAGGTAGACTAGAAGCATTCCGTGAGATTCTACCTTAAGACCCTGGTTACCGTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043915.4 |
||
| 3UTR CCA 72 bp | TGGCTCTGGCTCCAGCTGGGCCACTCAGCGGATCAGTaGCTAACGTGGCCGTGCCTCATGAGCAGCACCACG | + |
|
Preference number: 3 (lower is better) Translates to: WLWLQLGHSADQ*LTWPCLMSSTT Trigger: CGTGGTGCTGCTCATGAGGCACGGCCACGTTAGCCACTGATCCGCTGAGTGGCCCAGCTGGAGCCAGAGCCA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043915.4 |
||
| 3UTR CCA 72 bp | AAAGTCCCTAGAGGAAGCTGGGCTGCTGGGCCGTGTTaGGACTCCATAACACTTGGTCCCTGGTGGGTGGCA | + |
|
Preference number: 3 (lower is better) Translates to: KVPRGSWAAGPC*DSITLGPWWVA Trigger: TGCCACCCACCAGGGACCAAGTGTTATGGAGTCCCAACACGGCCCAGCAGCCCAGCTTCCTCTAGGGACTTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043915.4 |
||
| 3UTR CCA 72 bp | CGGAGGCATCCATCACTATTCCCTCGGTACATGCATTaGCTCTGGCTCCAGCTGGGCCACTCAGCGGATCAG | + |
|
Preference number: 3 (lower is better) Translates to: RRHPSLFPRYMH*LWLQLGHSADQ Trigger: CTGATCCGCTGAGTGGCCCAGCTGGAGCCAGAGCCAATGCATGTACCGAGGGAATAGTGATGGATGCCTCCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043915.4 |
||
| 3UTR CCA 72 bp | ATAAAGGCATCCCTCTGCGCTCCAGACCCACACCATTaGTCTGGCCCTTGGTGCCCCCTAGTGGCAGTAAGT | + |
|
Preference number: 3 (lower is better) Translates to: IKASLCAPDPHH*SGPWCPLVAVS Trigger: ACTTACTGCCACTAGGGGGCACCAAGGGCCAGACCAATGGTGTGGGTCTGGAGCGCAGAGGGATGCCTTTAT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043915.4 |
||
| 3UTR-3UTR CAA 90 bp | GGGATAAAGGCATCCCTCTGCGCTCCAGACCCACACCATTGGTCTGGCCCTTGGCCTAGTGGCAGTAAGTaGACACCACAGGGTCAGTTT | + |
|
Preference number: 3 (lower is better) Translates to: GIKASLCAPDPHHWSGPWPSGSK*TPQGQF Trigger: AAACTGACCCTGTGGTGTCAACTTACTGCCACTAGG...CCAAGGGCCAGACCAATGGTGTGGGTCTGGAGCGCAGAGGGATGCCTTTATCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043915.4 |
||
| 3UTR CCA 72 bp | CTGGGCTGCTGGGCCGTGTTGGGACTCCATAACACTTaGTCCCTGGTGGGTGGCATTGTTTGGAGAGGTTTT | + |
|
Preference number: 3 (lower is better) Translates to: LGCWAVLGLHNT*SLVGGIVWRGF Trigger: AAAACCTCTCCAAACAATGCCACCCACCAGGGACCAAGTGTTATGGAGTCCCAACACGGCCCAGCAGCCCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043915.4 |
||
| 3UTR CCA 72 bp | TCTAGCTGGGCTAGCACCAACCCTACCTGGACACTCTaGGAGGTGAGCCATGTAACACGCATGCCAGAGTTC | + |
|
Preference number: 3 (lower is better) Translates to: SSWASTNPTWTL*EVSHVTRMPEF Trigger: GAACTCTGGCATGCGTGTTACATGGCTCACCTCCCAGAGTGTCCAGGTAGGGTTGGTGCTAGCCCAGCTAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043915.4 |
||
| 3UTR-3UTR CAA 90 bp | CCTCTGATCCACTGGTTTCTCCCCAACTCCTACTTCCACCCAGGTAAGCAGCTGGGTGGGTGGCATTGTTaGGAGAGGTTTTGGAGGTGC | + |
|
Preference number: 3 (lower is better) Translates to: PLIHWFLPNSYFHPGKQLGGWHC*ERFWRC Trigger: GCACCTCCAAAACCTCTCCAAACAATGCCACCCACC...CAGCTGCTTACCTGGGTGGAAGTAGGAGTTGGGGAGAAACCAGTGGATCAGAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043915.4 |
||
| 3UTR-3UTR CAA 90 bp | CCTCTGATCCACTGGTTTCTCCCCAACTCCTACTTCCACCCAGGTAAGCAGCTGCCCTGGTGGGTGGCATaGTTTGGAGAGGTTTTGGAG | + |
|
Preference number: 3 (lower is better) Translates to: PLIHWFLPNSYFHPGKQLPWWVA*FGEVLE Trigger: CTCCAAAACCTCTCCAAACAATGCCACCCACCAGGG...CAGCTGCTTACCTGGGTGGAAGTAGGAGTTGGGGAGAAACCAGTGGATCAGAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043915.4 |
||
| 3UTR TCA 72 bp | TGGTCTGGCCCTTGGTGCCCCCTAGTGGCAGTAAGTTaGCACCACAGGGTCAGTTTTCTGAGACAGGTAGAG | + |
|
Preference number: 3 (lower is better) Translates to: WSGPWCPLVAVS*HHRVSFLRQVE Trigger: CTCTACCTGTCTCAGAAAACTGACCCTGTGGTGTCAACTTACTGCCACTAGGGGGCACCAAGGGCCAGACCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000043915.4 |
||
| 3UTR TCA 72 bp | AGTGACAATTGCTGCTTTAAAGGTACCAAGCCCGTCTaGGTGTCCCTCCCCCAACAAGGCCTGCACAGGCTA | + |
|
Preference number: 3 (lower is better) Translates to: SDNCCFKGTKPV*VSLPQQGLHRL Trigger: TAGCCTGTGCAGGCCTTGTTGGGGGAGGGACACTCAGACGGGCTTGGTACCTTTAAAGCAGCAATTGTCACT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043915.4 |
||
| 3UTR CCA 72 bp | CTCCATAACACTTGGTCCCTGGTGGGTGGCATTGTTTaGAGAGGTTTTGGAGGTGCAACCCTTGGAAATGGG | + |
|
Preference number: 3 (lower is better) Translates to: LHNTWSLVGGIV*RGFGGATLGNG Trigger: CCCATTTCCAAGGGTTGCACCTCCAAAACCTCTCCAAACAATGCCACCCACCAGGGACCAAGTGTTATGGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043915.4 |
||
| 3UTR CCA 72 bp | GGAGATGTGGGCATAGTGGGAGTAAAGGTTGGCATTTaGTCCAGGAGTGCTGATGGCTTGGGAGAGGCTATA | + |
|
Preference number: 3 (lower is better) Translates to: GDVGIVGVKVGI*SRSADGLGEAI Trigger: TATAGCCTCTCCCAAGCCATCAGCACTCCTGGACCAAATGCCAACCTTTACTCCCACTATGCCCACATCTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043915.4 |
||
| 3UTR TCA 72 bp | AGTGGGAGTAAAGGTTGGCATTTGGTCCAGGAGTGCTaGTGGCTTGGGAGAGGCTATAAATGGGTACAGAGC | + |
|
Preference number: 3 (lower is better) Translates to: SGSKGWHLVQEC*WLGRGYKWVQS Trigger: GCTCTGTACCCATTTATAGCCTCTCCCAAGCCATCAGCACTCCTGGACCAAATGCCAACCTTTACTCCCACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043915.4 |
||
| 3UTR TCA 72 bp | CTTGGAAGTGGGCCATTTCCTGGAAGAAAGGCTGCTTaGGTGATACCGAGGAAGAGGATGGAAGCCTGTGAA | + |
|
Preference number: 3 (lower is better) Translates to: LGSGPFPGRKAA*VIPRKRMEACE Trigger: TTCACAGGCTTCCATCCTCTTCCTCGGTATCACTCAAGCAGCCTTTCTTCCAGGAAATGGCCCACTTCCAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043915.4 |
||
| 3UTR CCA 72 bp | CCATTTCCCTCTGAGCATCTACCTGACTCTAGCAGATaGGTCAGGGGAGGTGGAGTTTATCACATCACAGAC | + |
|
Preference number: 3 (lower is better) Translates to: PFPSEHLPDSSR*VRGGGVYHITD Trigger: GTCTGTGATGTGATAAACTCCACCTCCCCTGACCCATCTGCTAGAGTCAGGTAGATGCTCAGAGGGAAATGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043915.4 |
||
| 3UTR CCA 72 bp | AATGTCTTCTTCTACCCAGGCTCGGTTCACTGTCTGTaGCTCCCATTTCCCTCTGAGCATCTACCTGACTCT | + |
|
Preference number: 3 (lower is better) Translates to: NVFFYPGSVHCL*LPFPSEHLPDS Trigger: AGAGTCAGGTAGATGCTCAGAGGGAAATGGGAGCCACAGACAGTGAACCGAGCCTGGGTAGAAGAAGACATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043915.4 |
||
| 3UTR TCA 72 bp | GTTTATCACATCACAGACACTCCCTGCCTTCAGGGATaGAGGAGATGTGGGCATAGTGGGAGTAAAGGTTGG | + |
|
Preference number: 3 (lower is better) Translates to: VYHITDTPCLQG*RRCGHSGSKGW Trigger: CCAACCTTTACTCCCACTATGCCCACATCTCCTTCATCCCTGAAGGCAGGGAGTGTCTGTGATGTGATAAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043915.4 |
||
| 3UTR TCA 72 bp | CCGTGCCTCATGAGCAGCACCACGACTTATAAACTGTaGTGTAGTAAATTGCTCAAGGGGAGCTCAGCCTCT | + |
|
Preference number: 3 (lower is better) Translates to: PCLMSSTTTYKL*CSKLLKGSSAS Trigger: AGAGGCTGAGCTCCCCTTGAGCAATTTACTACATCACAGTTTATAAGTCGTGGTGCTGCTCATGAGGCACGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043915.4 |
||
| 3UTR CCA 72 bp | AATCTTCCTCCTGTGACCGAAAGAAATGAACAAATCTaGCAGCGATCTCCAGCTTCACCCCAAGGCAGCCTT | + |
|
Preference number: 3 (lower is better) Translates to: NLPPVTERNEQI*QRSPASPQGSL Trigger: AAGGCTGCCTTGGGGTGAAGCTGGAGATCGCTGCCAGATTTGTTCATTTCTTTCGGTCACAGGAGGAAGATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043915.4 |
||
| 3UTR CCA 72 bp | GCTAGATATTTAGAGTTGATATCCGTAGGAAGACGCTaGCCATCTCAGACTGGAGGAGGTGACAGAAGACGG | + |
|
Preference number: 3 (lower is better) Translates to: ARYLELISVGRR*PSQTGGGDRRR Trigger: CCGTCTTCTGTCACCTCCTCCAGTCTGAGATGGCCAGCGTCTTCCTACGGATATCAACTCTAAATATCTAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043915.4 |
||
| 3UTR CCA 72 bp | AGTGGAGACTGTAGACATGAGCTTAACTGTAGCCCATaGTGTGCTCTGACTGACTTCAGCTCAAGTGGAAGG | + |
|
Preference number: 3 (lower is better) Translates to: SGDCRHELNCSP*CALTDFSSSGR Trigger: CCTTCCACTTGAGCTGAAGTCAGTCAGAGCACACCATGGGCTACAGTTAAGCTCATGTCTACAGTCTCCACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043915.4 |
||
| 3UTR TCA 72 bp | GGAACCTTAGAATCTTCCTCCTGTGACCGAAAGAAATaGACAAATCTGGCAGCGATCTCCAGCTTCACCCCA | + |
|
Preference number: 3 (lower is better) Translates to: GTLESSSCDRKK*TNLAAISSFTP Trigger: TGGGGTGAAGCTGGAGATCGCTGCCAGATTTGTTCATTTCTTTCGGTCACAGGAGGAAGATTCTAAGGTTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043915.4 |
||
| 3UTR TCA 72 bp | CCCATTTTCCAAAGGTTCAATAGTAGAACCCGTCTTTaGCCAGAGGCCCGAGGAACCTTAGAATCTTCCTCC | + |
|
Preference number: 3 (lower is better) Translates to: PIFQRFNSRTRL*PEARGTLESSS Trigger: GGAGGAAGATTCTAAGGTTCCTCGGGCCTCTGGTCAAAGACGGGTTCTACTATTGAACCTTTGGAAAATGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043915.4 |
||
| 3UTR GCA 72 bp | GTTCTCAGCCTGGAACTCACAATGGAAAACGAATTCTaGAAGGAATTGGCACCGATTTCCTCAACGCCTCAT | + |
|
Preference number: 3 (lower is better) Translates to: VLSLELTMENEF*KELAPISSTPH Trigger: ATGAGGCGTTGAGGAAATCGGTGCCAATTCCTTGCAGAATTCGTTTTCCATTGTGAGTTCCAGGCTGAGAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043915.4 |
||
| 3UTR GCA 72 bp | GCAGCACCACGACTTATAAACTGTGATGTAGTAAATTaGTCAAGGGGAGCTCAGCCTCTGATCCACTGGTTT | + |
|
Preference number: 3 (lower is better) Translates to: AAPRLINCDVVN*SRGAQPLIHWF Trigger: AAACCAGTGGATCAGAGGCTGAGCTCCCCTTGAGCAATTTACTACATCACAGTTTATAAGTCGTGGTGCTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043915.4 |
||
| 3UTR CCA 72 bp | TGGAACTCACAATGGAAAACGAATTCTGCAAGGAATTaGCACCGATTTCCTCAACGCCTCATCAAGGAGCAG | + |
|
Preference number: 3 (lower is better) Translates to: WNSQWKTNSARN*HRFPQRLIKEQ Trigger: CTGCTCCTTGATGAGGCGTTGAGGAAATCGGTGCCAATTCCTTGCAGAATTCGTTTTCCATTGTGAGTTCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043915.4 |
||
| 3UTR CCA 72 bp | GTGAGCCATGTAACACGCATGCCAGAGTTCTCAGCCTaGAACTCACAATGGAAAACGAATTCTGCAAGGAAT | + |
|
Preference number: 3 (lower is better) Translates to: VSHVTRMPEFSA*NSQWKTNSARN Trigger: ATTCCTTGCAGAATTCGTTTTCCATTGTGAGTTCCAGGCTGAGAACTCTGGCATGCGTGTTACATGGCTCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043915.4 |
||
| 3UTR GCA 72 bp | AGCTTCATTTCCTCCACAAGGCTTGCTCATTCTGGTTaGCTATTGAGCTTTAGTGAACAAAGCACGAAGGTC | + |
|
Preference number: 3 (lower is better) Translates to: SFISSTRLAHSG*LLSFSEQSTKV Trigger: GACCTTCGTGCTTTGTTCACTAAAGCTCAATAGGCAACCAGAATGAGCAAGCCTTGTGGAGGAAATGAAGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043915.4 |
||
| 3UTR TCA 72 bp | TACCCATGGCTTCACACATACTGGGCAAACACTATCTaGCTGAGCCCTATAATTGGAATCAGGGGTTATAAT | + |
|
Preference number: 3 (lower is better) Translates to: YPWLHTYWANTI*LSPIIGIRGYN Trigger: ATTATAACCCCTGATTCCAATTATAGGGCTCAGTCAGATAGTGTTTGCCCAGTATGTGTGAAGCCATGGGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043915.4 |
||
| 3UTR CAA 72 bp | CCTCTGCGCTCCAGACCCACACCATTGGTCTGGCCCTaGGTGCCCCCTAGTGGCAGTAAGTTGACACCACAG | + |
|
Preference number: 4 (lower is better) Translates to: PLRSRPTPLVWP*VPPSGSKLTPQ Trigger: CTGTGGTGTCAACTTACTGCCACTAGGGGGCACCAAGGGCCAGACCAATGGTGTGGGTCTGGAGCGCAGAGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043915.4 |
||
| 3UTR CAA 72 bp | GATAAAGGCATCCCTCTGCGCTCCAGACCCACACCATaGGTCTGGCCCTTGGTGCCCCCTAGTGGCAGTAAG | + |
|
Preference number: 4 (lower is better) Translates to: DKGIPLRSRPTP*VWPLVPPSGSK Trigger: CTTACTGCCACTAGGGGGCACCAAGGGCCAGACCAATGGTGTGGGTCTGGAGCGCAGAGGGATGCCTTTATC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043915.4 |
||
| 3UTR CAA 72 bp | CCGGAGGCATCCATCACTATTCCCTCGGTACATGCATaGGCTCTGGCTCCAGCTGGGCCACTCAGCGGATCA | + |
|
Preference number: 4 (lower is better) Translates to: PEASITIPSVHA*ALAPAGPLSGS Trigger: TGATCCGCTGAGTGGCCCAGCTGGAGCCAGAGCCAATGCATGTACCGAGGGAATAGTGATGGATGCCTCCGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043915.4 |
||
| CDS-3UTR GCA 90 bp | GTGTCCCTCCCCCAACAAGGCCTGCACAGGCTATTCACAGCCAGAGGGATAAAGCTGGGCTCCAGAGCCTaGAGCCCCTTCCATGCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: VSLPQQGLHRLFTARGIKLGSRA*SPFHAF Trigger: AAAGGCATGGAAGGGGCTGCAGGCTCTGGAGCCCAG...CTTTATCCCTCTGGCTGTGAATAGCCTGTGCAGGCCTTGTTGGGGGAGGGACAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000043915.4 |
||
| CDS-3UTR CCA 90 bp | GCCTCATCAAGGAGCAGGGCAATCCTCACGTCAGAAAGGGAGGCAGAGAGGTTCTCCATGGGCAATGTCTaGGCTCCAGAGCCTGCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: ASSRSRAILTSEREAERFSMGNV*APEPAA Trigger: GGCTGCAGGCTCTGGAGCCCAGACATTGCCCATGGA...GAACCTCTCTGCCTCCCTTTCTGACGTGAGGATTGCCCTGCTCCTTGATGAGGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043915.4 |
||
| CDS-3UTR CCA 90 bp | GCCTCATCAAGGAGCAGGGCAATCCTCACGTCAGAAAGGGAGGCAGAGAGGTTCTCCAGTGTGGAGTTCTaGGCCCCGAGAGACAGCATG | + |
|
Preference number: 4 (lower is better) Translates to: ASSRSRAILTSEREAERFSSVEF*APRDSM Trigger: CATGCTGTCTCTCGGGGCCCAGAACTCCACACTGGA...GAACCTCTCTGCCTCCCTTTCTGACGTGAGGATTGCCCTGCTCCTTGATGAGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043915.4 |
||
| CDS-3UTR GCA 90 bp | AAACTTTCTGCTCACCCGGTCGTTCCCAGACCTCTCCACAGGCCTGGCCTCCGAGGATTTCCAAGATGGTaGAGGAGAGCTGGCTGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: KLSAHPVVPRPLHRPGLRGFPRW*RRAGCH Trigger: ATGACAGCCAGCTCTCCTGCACCATCTTGGAAATCC...TCGGAGGCCAGGCCTGTGGAGAGGTCTGGGAACGACCGGGTGAGCAGAAAGTTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043915.4 |
||
| CDS-3UTR GCA 90 bp | GGGATAAAGGCATCCCTCTGCGCTCCAGACCCACACCATTGGTCTGGCCCTTGGCCAGCAGCTTCAGCTTaGCATTGTCAGGAAGGACAA | + |
|
Preference number: 4 (lower is better) Translates to: GIKASLCAPDPHHWSGPWPAASA*HCQEGQ Trigger: TTGTCCTTCCTGACAATGGCAAGCTGAAGCTGCTGG...CCAAGGGCCAGACCAATGGTGTGGGTCTGGAGCGCAGAGGGATGCCTTTATCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043915.4 |
||
| CDS-3UTR CCA 90 bp | CTCAGCGGATCAGTGGCTAACGTGGCCGTGCCTCATGAGCAGCACCACGACTTATTGCCCCTCCACTCTTaGACCCTGACTGGAGAATCA | + |
|
Preference number: 4 (lower is better) Translates to: LSGSVANVAVPHEQHHDLLPLHS*TLTGES Trigger: TGATTCTCCAGTCAGGGTCCAAGAGTGGAGGGGCAA...TAAGTCGTGGTGCTGCTCATGAGGCACGGCCACGTTAGCCACTGATCCGCTGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043915.4 |
||
| CDS-3UTR CCA 90 bp | GCAATCCTCACGTCAGAAAGGGAGGCAGAGAGGTTCCAAAATGAGACCCGTGGCCCTGAGGGCTATTGCTaGCCAGCCTCTGCAGTAGCT | + |
|
Preference number: 4 (lower is better) Translates to: AILTSEREAERFQNETRGPEGYC*PASAVA Trigger: AGCTACTGCAGAGGCTGGCCAGCAATAGCCCTCAGG...GCCACGGGTCTCATTTTGGAACCTCTCTGCCTCCCTTTCTGACGTGAGGATTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043915.4 |
||
| CDS-3UTR CCA 90 bp | CTCAGCGGATCAGTGGCTAACGTGGCCGTGCCTCATGAGCAGCACCACGACTTAAGGGGATTTCCAAGATaGTGCAGGAGAGCTGGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: LSGSVANVAVPHEQHHDLRGFPR*CRRAGC Trigger: ACAGCCAGCTCTCCTGCACCATCTTGGAAATCCCCT...TAAGTCGTGGTGCTGCTCATGAGGCACGGCCACGTTAGCCACTGATCCGCTGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043915.4 |
||
| CDS-3UTR GCA 90 bp | GCCTCATCAAGGAGCAGGGCAATCCTCACGTCAGAAAGGGAGGCAGAGAGGTTCAGAAGGCAGTGGAGATaGTCAGTGGGGATAGGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: ASSRSRAILTSEREAERFRRQWR*SVGIGR Trigger: TCTTCCTATCCCCACTGAGCATCTCCACTGCCTTCT...GAACCTCTCTGCCTCCCTTTCTGACGTGAGGATTGCCCTGCTCCTTGATGAGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043915.4 |
||
| CDS-3UTR CCA 90 bp | GGGATAAAGGCATCCCTCTGCGCTCCAGACCCACACCATTGGTCTGGCCCTTGGCTCTTGGACCCTGACTaGAGAATCATACATATCTGG | + |
|
Preference number: 4 (lower is better) Translates to: GIKASLCAPDPHHWSGPWLLDPD*RIIHIW Trigger: CCAGATATGTATGATTCTCCAGTCAGGGTCCAAGAG...CCAAGGGCCAGACCAATGGTGTGGGTCTGGAGCGCAGAGGGATGCCTTTATCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043915.4 |
||
| 3UTR CAA 72 bp | TTGGTCTGGCCCTTGGTGCCCCCTAGTGGCAGTAAGTaGACACCACAGGGTCAGTTTTCTGAGACAGGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: LVWPLVPPSGSK*TPQGQFSETGR Trigger: TCTACCTGTCTCAGAAAACTGACCCTGTGGTGTCAACTTACTGCCACTAGGGGGCACCAAGGGCCAGACCAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000043915.4 |
||
| 3UTR CAA 72 bp | GTCGGATGGCGGAAAGAGGTGATTGCTGGCCTCTCATaGGCTGGAGCAGAGATGTATAGCAACGAGAGAGCT | + |
|
Preference number: 4 (lower is better) Translates to: VGWRKEVIAGLS*AGAEMYSNERA Trigger: AGCTCTCTCGTTGCTATACATCTCTGCTCCAGCCAATGAGAGGCCAGCAATCACCTCTTTCCGCCATCCGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043915.4 |
||
| CDS-3UTR TCA 90 bp | CTCAGCGGATCAGTGGCTAACGTGGCCGTGCCTCATGAGCAGCACCACGACTTATGGGGCCTCAGCTTCTaGTCCATAAATAAAGCATTG | + |
|
Preference number: 4 (lower is better) Translates to: LSGSVANVAVPHEQHHDLWGLSF*SINKAL Trigger: CAATGCTTTATTTATGGATCAGAAGCTGAGGCCCCA...TAAGTCGTGGTGCTGCTCATGAGGCACGGCCACGTTAGCCACTGATCCGCTGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043915.4 |
||
| CDS-3UTR TCA 90 bp | GGCCATCTCAGACTGGAGGAGGTGACAGAAGACGGTAACCAGGGTCTTAAGGTACCTCAAAGATTTTGCTaGTGCCCAGGCGGGACAGAA | + |
|
Preference number: 4 (lower is better) Translates to: GHLRLEEVTEDGNQGLKVPQRFC*CPGGTE Trigger: TTCTGTCCCGCCTGGGCATCAGCAAAATCTTTGAGG...TACCTTAAGACCCTGGTTACCGTCTTCTGTCACCTCCTCCAGTCTGAGATGGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043915.4 |
||
| CDS-3UTR GCA 90 bp | AGTAAGTTGACACCACAGGGTCAGTTTTCTGAGACAGGTAGAGACCCCCATTTTGCCGGGCATCCTTCTTaGCCCTCCACTCTTGGACCC | + |
|
Preference number: 4 (lower is better) Translates to: SKLTPQGQFSETGRDPHFAGHPS*PSTLGP Trigger: GGGTCCAAGAGTGGAGGGGCAAGAAGGATGCCCGGC...AAAATGGGGGTCTCTACCTGTCTCAGAAAACTGACCCTGTGGTGTCAACTTACT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000043915.4 |
||
| CDS-3UTR GCA 90 bp | TGGCTCTGGCTCCAGCTGGGCCACTCAGCGGATCAGTGGCTAACGTGGCCGTGCATTCATACTGCCACCTaGCTCGAAAGTAAATATAAT | + |
|
Preference number: 4 (lower is better) Translates to: WLWLQLGHSADQWLTWPCIHTAT*LESKYN Trigger: ATTATATTTACTTTCGAGGCAGGTGGCAGTATGAAT...GCACGGCCACGTTAGCCACTGATCCGCTGAGTGGCCCAGCTGGAGCCAGAGCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043915.4 |
||
| CDS-3UTR CCA 90 bp | TTCAGCTCAAGTGGAAGGAGAGGGGACAGACACACAGACACTAATGAGCTTGGAACGAGATGCGGAGCTTaGGCACCCACACATCCACCA | + |
|
Preference number: 4 (lower is better) Translates to: FSSSGRRGDRHTDTNELGTRCGA*APTHPP Trigger: TGGTGGATGTGTGGGTGCCCAAGCTCCGCATCTCGT...TCCAAGCTCATTAGTGTCTGTGTGTCTGTCCCCTCTCCTTCCACTTGAGCTGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043915.4 |
||
| CDS-3UTR CCA 90 bp | TGTAGACATGAGCTTAACTGTAGCCCATGGTGTGCTCTGACTGACTTCAGCTCAGTCGTGGGGTCTCCATaGGCAATGTCTGGGCTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: CRHELNCSPWCALTDFSSVVGSP*AMSGLQ Trigger: CTGGAGCCCAGACATTGCCCATGGAGACCCCACGAC...TGAGCTGAAGTCAGTCAGAGCACACCATGGGCTACAGTTAAGCTCATGTCTACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043915.4 |
||
| CDS-3UTR TCA 90 bp | CTCAGCGGATCAGTGGCTAACGTGGCCGTGCCTCATGAGCAGCACCACGACTTAATGGACGTCCCAGTTTaGCATCTCTTTGAAGTTGAA | + |
|
Preference number: 4 (lower is better) Translates to: LSGSVANVAVPHEQHHDLMDVPV*HLFEVE Trigger: TTCAACTTCAAAGAGATGTCAAACTGGGACGTCCAT...TAAGTCGTGGTGCTGCTCATGAGGCACGGCCACGTTAGCCACTGATCCGCTGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043915.4 |
||
| CDS-3UTR TCA 90 bp | TCAAGGAGCAGGGCAATCCTCACGTCAGAAAGGGAGGCAGAGAGGTTCCAAAATGAGATGAGATCCGGGTaGGGTCACCATTCTCCTCAA | + |
|
Preference number: 4 (lower is better) Translates to: SRSRAILTSEREAERFQNEMRSG*GHHSPQ Trigger: TTGAGGAGAATGGTGACCTCACCCGGATCTCATCTC...ATTTTGGAACCTCTCTGCCTCCCTTTCTGACGTGAGGATTGCCCTGCTCCTTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043915.4 |
||
| CDS-3UTR GCA 90 bp | CTCAGCCTGGAACTCACAATGGAAAACGAATTCTGCAAGGAATTGGCACCGATTCACAGTGAGGAGGCCTaGCAGAAACAGGCCCAGGTC | + |
|
Preference number: 4 (lower is better) Translates to: LSLELTMENEFCKELAPIHSEEA*QKQAQV Trigger: GACCTGGGCCTGTTTCTGGCAGGCCTCCTCACTGTG...AATCGGTGCCAATTCCTTGCAGAATTCGTTTTCCATTGTGAGTTCCAGGCTGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043915.4 |
||
| CDS-3UTR GCA 90 bp | TGTAGACATGAGCTTAACTGTAGCCCATGGTGTGCTCTGACTGACTTCAGCTCAGCAAAGATGTCTGCCTaGAACCCCTGCTCCAGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: CRHELNCSPWCALTDFSSAKMSA*NPCSSS Trigger: GCTGCTGGAGCAGGGGTTGCAGGCAGACATCTTTGC...TGAGCTGAAGTCAGTCAGAGCACACCATGGGCTACAGTTAAGCTCATGTCTACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043915.4 |
||
| CDS-3UTR GCA 90 bp | AGGAAGCCGAGTCGCCTCTCTAAGCTTCATTTCCTCCACAAGGCTTGCTCATTCTTCAGTTCAGCCTTGTaGACAGCCTCTCCCACCTTC | + |
|
Preference number: 4 (lower is better) Translates to: RKPSRLSKLHFLHKACSFFSSAL*TASPTF Trigger: GAAGGTGGGAGAGGCTGTGCACAAGGCTGAACTGAA...GAATGAGCAAGCCTTGTGGAGGAAATGAAGCTTAGAGAGGCGACTCGGCTTCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043915.4 |
||
| CDS-3UTR GCA 90 bp | AGATGGGTCAGGGGAGGTGGAGTTTATCACATCACAGACACTCCCTGCCTTCAGCTGCAGCCCCTTCCATaGCTTTCTCATCCATCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: RWVRGGGVYHITDTPCLQLQPLP*LSHPSS Trigger: TGAAGATGGATGAGAAAGGCATGGAAGGGGCTGCAG...CTGAAGGCAGGGAGTGTCTGTGATGTGATAAACTCCACCTCCCCTGACCCATCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043915.4 |
||
| CDS-3UTR TCA 90 bp | TGTAGACATGAGCTTAACTGTAGCCCATGGTGTGCTCTGACTGACTTCAGCTCAGGACAAATGTGGCTGTaGTGTTTCCCCGGTAGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: CRHELNCSPWCALTDFSSGQMWL*CFPGRG Trigger: TCCCCTACCGGGGAAACATCACAGCCACATTTGTCC...TGAGCTGAAGTCAGTCAGAGCACACCATGGGCTACAGTTAAGCTCATGTCTACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043915.4 |
||
| CDS-3UTR GCA 90 bp | TTCAGCTCAAGTGGAAGGAGAGGGGACAGACACACAGACACTAATGAGCTTGGAGGAGCATCTCTGTCCTaGAGGAGACCTTTCACAGTG | + |
|
Preference number: 4 (lower is better) Translates to: FSSSGRRGDRHTDTNELGGASLS*RRPFTV Trigger: CACTGTGAAAGGTCTCCTGCAGGACAGAGATGCTCC...TCCAAGCTCATTAGTGTCTGTGTGTCTGTCCCCTCTCCTTCCACTTGAGCTGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043915.4 |
||
| CDS-3UTR GCA 90 bp | AGGAAGCCGAGTCGCCTCTCTAAGCTTCATTTCCTCCACAAGGCTTGCTCATTCTTGCTGGCCAGCCTCTaGAGTAGCTTGAAGCCAAAT | + |
|
Preference number: 4 (lower is better) Translates to: RKPSRLSKLHFLHKACSFLLASL*SSLKPN Trigger: ATTTGGCTTCAAGCTACTGCAGAGGCTGGCCAGCAA...GAATGAGCAAGCCTTGTGGAGGAAATGAAGCTTAGAGAGGCGACTCGGCTTCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043915.4 |
||
| CDS-3UTR CCA 90 bp | CTCAGCCTGGAACTCACAATGGAAAACGAATTCTGCAAGGAATTGGCACCGATTCCCCGAGAGACAGCATaGAGAAGGCAGTGGAGATGC | + |
|
Preference number: 4 (lower is better) Translates to: LSLELTMENEFCKELAPIPRETA*RRQWRC Trigger: GCATCTCCACTGCCTTCTCCATGCTGTCTCTCGGGG...AATCGGTGCCAATTCCTTGCAGAATTCGTTTTCCATTGTGAGTTCCAGGCTGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043915.4 |
||
| CDS-3UTR CCA 90 bp | AGTAAGTTGACACCACAGGGTCAGTTTTCTGAGACAGGTAGAGACCCCCATTTTGGATTTCCTCCAGTGTaGAGTTCTGGGCCCCGAGAG | + |
|
Preference number: 4 (lower is better) Translates to: SKLTPQGQFSETGRDPHFGFPPV*SSGPRE Trigger: CTCTCGGGGCCCAGAACTCCACACTGGAGGAAATCC...AAAATGGGGGTCTCTACCTGTCTCAGAAAACTGACCCTGTGGTGTCAACTTACT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000043915.4 |
||
| CDS-3UTR CCA 90 bp | AGATGGGTCAGGGGAGGTGGAGTTTATCACATCACAGACACTCCCTGCCTTCAGTCGTACAAGCCCCTTTaGAACATCATGGGTACCTTC | + |
|
Preference number: 4 (lower is better) Translates to: RWVRGGGVYHITDTPCLQSYKPL*NIMGTF Trigger: GAAGGTACCCATGATGTTCCAAAGGGGCTTGTACGA...CTGAAGGCAGGGAGTGTCTGTGATGTGATAAACTCCACCTCCCCTGACCCATCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043915.4 |
||
| 3UTR CAA 72 bp | GAAGGAGAGGGGACAGACACACAGACACTAATGAGCTaGGAAGTGGGCCATTTCCTGGAAGAAAGGCTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: EGEGTDTQTLMS*EVGHFLEERLL Trigger: AAGCAGCCTTTCTTCCAGGAAATGGCCCACTTCCAAGCTCATTAGTGTCTGTGTGTCTGTCCCCTCTCCTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043915.4 |
||
| CDS-3UTR CCA 90 bp | CTCCCTGCCTTCAGGGATGAAGGAGATGTGGGCATAGTGGGAGTAAAGGTTGGCGTGTTTTCTAAGTCCTaGAAGTTAGTGAGCACCATG | + |
|
Preference number: 4 (lower is better) Translates to: LPAFRDEGDVGIVGVKVGVFSKS*KLVSTM Trigger: CATGGTGCTCACTAACTTCCAGGACTTAGAAAACAC...GCCAACCTTTACTCCCACTATGCCCACATCTCCTTCATCCCTGAAGGCAGGGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043915.4 |
||
| CDS-3UTR TCA 90 bp | ATCAAGGAGCAGGGCAATCCTCACGTCAGAAAGGGAGGCAGAGAGGTTCCAAAATCTCATAGATCATCATaGGGAAGGGTCTGTCTAGCT | + |
|
Preference number: 4 (lower is better) Translates to: IKEQGNPHVRKGGREVPKSHRSS*GRVCLA Trigger: AGCTAGACAGACCCTTCCTCATGATGATCTATGAGA...TTTTGGAACCTCTCTGCCTCCCTTTCTGACGTGAGGATTGCCCTGCTCCTTGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043915.4 |
||
| CDS-3UTR CCA 90 bp | ATCAAGGAGCAGGGCAATCCTCACGTCAGAAAGGGAGGCAGAGAGGTTCCAAAACTCCTTGGTCTGTTTTaGGTCGAATTCATACTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: IKEQGNPHVRKGGREVPKLLGLF*VEFILP Trigger: TGGCAGTATGAATTCGACCCAAAACAGACCAAGGAG...TTTTGGAACCTCTCTGCCTCCCTTTCTGACGTGAGGATTGCCCTGCTCCTTGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043915.4 |
||
| 3UTR CAA 72 bp | GTAAAGGTTGGCATTTGGTCCAGGAGTGCTGATGGCTaGGGAGAGGCTATAAATGGGTACAGAGCACAAAGT | + |
|
Preference number: 4 (lower is better) Translates to: VKVGIWSRSADG*GEAINGYRAQS Trigger: ACTTTGTGCTCTGTACCCATTTATAGCCTCTCCCAAGCCATCAGCACTCCTGGACCAAATGCCAACCTTTAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043915.4 |
||
| CDS-3UTR TCA 90 bp | AGATGGGTCAGGGGAGGTGGAGTTTATCACATCACAGACACTCCCTGCCTTCAGAGTAAATATAATTTGTaGGAATCATCACGGTGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: RWVRGGGVYHITDTPCLQSKYNL*ESSRCL Trigger: CAGGCACCGTGATGATTCTCACAAATTATATTTACT...CTGAAGGCAGGGAGTGTCTGTGATGTGATAAACTCCACCTCCCCTGACCCATCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043915.4 |
||
| CDS-3UTR TCA 90 bp | AGTAAGTTGACACCACAGGGTCAGTTTTCTGAGACAGGTAGAGACCCCCATTTTTCTTGCCTTTCTCTATaGAGAACTCCTCCTCCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: SKLTPQGQFSETGRDPHFSCLSL*RTPPPW Trigger: CCAAGGAGGAGGAGTTCTTCATAGAGAAAGGCAAGA...AAAATGGGGGTCTCTACCTGTCTCAGAAAACTGACCCTGTGGTGTCAACTTACT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000043915.4 |
||
| CDS-3UTR CCA 90 bp | ATTGTTTGGAGAGGTTTTGGAGGTGCAACCCTTGGAAATGGGTGGGGTCTGAAGAGAATCATACATATCTaGAGCATCTCTGTCCTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: IVWRGFGGATLGNGWGLKRIIHI*SISVLQ Trigger: CTGCAGGACAGAGATGCTCCAGATATGTATGATTCT...CTTCAGACCCCACCCATTTCCAAGGGTTGCACCTCCAAAACCTCTCCAAACAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043915.4 |
||
| CDS-3UTR CCA 90 bp | AGTAAGTTGACACCACAGGGTCAGTTTTCTGAGACAGGTAGAGACCCCCATTTTGAAGGCTTTTCCACTTaGCAAAGATGTCTGCCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: SKLTPQGQFSETGRDPHFEGFST*QRCLPA Trigger: TGCAGGCAGACATCTTTGCCAAGTGGAAAAGCCTTC...AAAATGGGGGTCTCTACCTGTCTCAGAAAACTGACCCTGTGGTGTCAACTTACT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000043915.4 |
||
| 3UTR CAA 72 bp | CTGGAACTCACAATGGAAAACGAATTCTGCAAGGAATaGGCACCGATTTCCTCAACGCCTCATCAAGGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: LELTMENEFCKE*APISSTPHQGA Trigger: TGCTCCTTGATGAGGCGTTGAGGAAATCGGTGCCAATTCCTTGCAGAATTCGTTTTCCATTGTGAGTTCCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043915.4 |
||
| CDS-3UTR CCA 90 bp | CAGAGTTCTCAGCCTGGAACTCACAATGGAAAACGAATTCTGCAAGGAATTGGCAGAACTCCTCCTCCTTaGTCTGTTTTGGGTCGAATT | + |
|
Preference number: 4 (lower is better) Translates to: QSSQPGTHNGKRILQGIGRTPPP*SVLGRI Trigger: AATTCGACCCAAAACAGACCAAGGAGGAGGAGTTCT...GCCAATTCCTTGCAGAATTCGTTTTCCATTGTGAGTTCCAGGCTGAGAACTCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043915.4 |
||
| CDS-3UTR TCA 90 bp | CAGAGTTCTCAGCCTGGAACTCACAATGGAAAACGAATTCTGCAAGGAATTGGCATCCACCACTCTTTTTaGGAGAAGGCTTTTCCACTT | + |
|
Preference number: 4 (lower is better) Translates to: QSSQPGTHNGKRILQGIGIHHSF*EKAFPL Trigger: AAGTGGAAAAGCCTTCTCTCAAAAAGAGTGGTGGAT...GCCAATTCCTTGCAGAATTCGTTTTCCATTGTGAGTTCCAGGCTGAGAACTCTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000043915.4 |
||
| CDS-3UTR CAA 90 bp | CTCAGCGGATCAGTGGCTAACGTGGCCGTGCCTCATGAGCAGCACCACGACTTACTTGCCCCTCCACTCTaGGACCCTGACTGGAGAATC | + |
|
Preference number: 5 (lower is better) Translates to: LSGSVANVAVPHEQHHDLLAPPL*DPDWRI Trigger: GATTCTCCAGTCAGGGTCCAAGAGTGGAGGGGCAAG...TAAGTCGTGGTGCTGCTCATGAGGCACGGCCACGTTAGCCACTGATCCGCTGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043915.4 |
||
| CDS-3UTR CAA 90 bp | GCCCGTCTGAGTGTCCCTCCCCCAACAAGGCCTGCACAGGCTATTCACAGCCAGGACATCTCTTTGAAGTaGAAGCCCTCCCGGATTTCC | + |
|
Preference number: 5 (lower is better) Translates to: ARLSVPPPTRPAQAIHSQDISLK*KPSRIS Trigger: GGAAATCCGGGAGGGCTTCAACTTCAAAGAGATGTC...CTGGCTGTGAATAGCCTGTGCAGGCCTTGTTGGGGGAGGGACACTCAGACGGGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043915.4 |
||
| CDS-3UTR CAA 90 bp | AAATTGCTCAAGGGGAGCTCAGCCTCTGATCCACTGGTTTCTCCCCAACTCCTATGCCGGGCATCCTTCTaGCCCCTCCACTCTTGGACC | + |
|
Preference number: 5 (lower is better) Translates to: KLLKGSSASDPLVSPQLLCRASF*PLHSWT Trigger: GGTCCAAGAGTGGAGGGGCAAGAAGGATGCCCGGCA...TAGGAGTTGGGGAGAAACCAGTGGATCAGAGGCTGAGCTCCCCTTGAGCAATTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000043915.4 |
||
| CDS-3UTR CAA 90 bp | GCCCGTCTGAGTGTCCCTCCCCCAACAAGGCCTGCACAGGCTATTCACAGCCAGAAGAACTCCTCCTCCTaGGTCTGTTTTGGGTCGAAT | + |
|
Preference number: 5 (lower is better) Translates to: ARLSVPPPTRPAQAIHSQKNSSS*VCFGSN Trigger: ATTCGACCCAAAACAGACCAAGGAGGAGGAGTTCTT...CTGGCTGTGAATAGCCTGTGCAGGCCTTGTTGGGGGAGGGACACTCAGACGGGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000043915.4 |
||
| CDS-3UTR CAA 90 bp | GGGATAAAGGCATCCCTCTGCGCTCCAGACCCACACCATTGGTCTGGCCCTTGGAGAAGGCTTTTCCACTaGGCAAAGATGTCTGCCTGC | + |
|
Preference number: 5 (lower is better) Translates to: GIKASLCAPDPHHWSGPWRRLFH*AKMSAC Trigger: GCAGGCAGACATCTTTGCCAAGTGGAAAAGCCTTCT...CCAAGGGCCAGACCAATGGTGTGGGTCTGGAGCGCAGAGGGATGCCTTTATCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043915.4 |
||
| CDS TCA 90 bp | CATACATATCTGGAGCATCTCTGTCCTGCAGGAGACCTTTCACAGTaGGGAGGCCTGCCAGAAACAGGCCCAGGTCCAGCATGCGAGTCA | + |
|
Preference number: 5 (lower is better) Translates to: HTYLEHLCPAGDLSQ*GGLPETGPGPACES Trigger: TGACTCGCATGCTGGACCTGGGCCTGTTTCTGGCAGGCCTCCTCACTGTGAAAGGTCTCCTGCAGGACAGAGATGCTCCAGATATGTATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043915.4 |
||
| CDS GCA 90 bp | CATATGTCGTGGGGTCTCCATGGGCAATGTCTGGGCTCCAGAGCCTaGAGCCCCTTCCATGCCTTTCTCATCCATCTTCAGTTCAGCCTT | + |
|
Preference number: 5 (lower is better) Translates to: HMSWGLHGQCLGSRA*SPFHAFLIHLQFSL Trigger: AAGGCTGAACTGAAGATGGATGAGAAAGGCATGGAAGGGGCTGCAGGCTCTGGAGCCCAGACATTGCCCATGGAGACCCCACGACATATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043915.4 |
||
| CDS-3UTR CAA 90 bp | GCCTCATCAAGGAGCAGGGCAATCCTCACGTCAGAAAGGGAGGCAGAGAGGTTCTCCAGCAGCTTCAGCTaGCCATTGTCAGGAAGGACA | + |
|
Preference number: 5 (lower is better) Translates to: ASSRSRAILTSEREAERFSSSFS*PLSGRT Trigger: TGTCCTTCCTGACAATGGCAAGCTGAAGCTGCTGGA...GAACCTCTCTGCCTCCCTTTCTGACGTGAGGATTGCCCTGCTCCTTGATGAGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043915.4 |
||
| CDS GCA 90 bp | TGGACCCTGACTGGAGAATCATACATATCTGGAGCATCTCTGTCCTaGAGGAGACCTTTCACAGTGAGGAGGCCTGCCAGAAACAGGCCC | + |
|
Preference number: 5 (lower is better) Translates to: WTLTGESYISGASLS*RRPFTVRRPARNRP Trigger: GGGCCTGTTTCTGGCAGGCCTCCTCACTGTGAAAGGTCTCCTGCAGGACAGAGATGCTCCAGATATGTATGATTCTCCAGTCAGGGTCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043915.4 |
||
| CDS CCA 90 bp | TTGTGTCGAGCAAGCTGCCGGGCATCCTTCTTGCCCCTCCACTCTTaGACCCTGACTGGAGAATCATACATATCTGGAGCATCTCTGTCC | + |
|
Preference number: 5 (lower is better) Translates to: LCRASCRASFLPLHS*TLTGESYISGASLS Trigger: GGACAGAGATGCTCCAGATATGTATGATTCTCCAGTCAGGGTCCAAGAGTGGAGGGGCAAGAAGGATGCCCGGCAGCTTGCTCGACACAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043915.4 |
||
| CDS-3UTR CAA 90 bp | AGATGGGTCAGGGGAGGTGGAGTTTATCACATCACAGACACTCCCTGCCTTCAGATCTTCAGTTCAGCCTaGTGCACAGCCTCTCCCACC | + |
|
Preference number: 5 (lower is better) Translates to: RWVRGGGVYHITDTPCLQIFSSA*CTASPT Trigger: GGTGGGAGAGGCTGTGCACAAGGCTGAACTGAAGAT...CTGAAGGCAGGGAGTGTCTGTGATGTGATAAACTCCACCTCCCCTGACCCATCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043915.4 |
||
| CDS TCA 90 bp | GAGCTTGTGGAGAAGGTAGTGGAAAGCCGCATGGACGTCCCAGTTTaGCATCTCTTTGAAGTTGAAGCCCTCCCGGATTTCCTCCAGTGT | + |
|
Preference number: 5 (lower is better) Translates to: ELVEKVVESRMDVPV*HLFEVEALPDFLQC Trigger: ACACTGGAGGAAATCCGGGAGGGCTTCAACTTCAAAGAGATGTCAAACTGGGACGTCCATGCGGCTTTCCACTACCTTCTCCACAAGCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043915.4 |
||
| CDS GCA 90 bp | GAGAGAAGGCTTTTCCACTTGGCAAAGATGTCTGCCTGCAACCCCTaGTCCAGCAGCTTCAGCTTGCCATTGTCAGGAAGGACAAATGTG | + |
|
Preference number: 5 (lower is better) Translates to: ERRLFHLAKMSACNP*SSSFSLPLSGRTNV Trigger: CACATTTGTCCTTCCTGACAATGGCAAGCTGAAGCTGCTGGAGCAGGGGTTGCAGGCAGACATCTTTGCCAAGTGGAAAAGCCTTCTCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043915.4 |
||
| CDS-3UTR CAA 90 bp | CAATCCTCACGTCAGAAAGGGAGGCAGAGAGGTTCCAAAATGAGACCCGTGGCTCAGTTTGACATCTCTTaGAAGTTGAAGCCCTCCCGG | + |
|
Preference number: 5 (lower is better) Translates to: QSSRQKGRQRGSKMRPVAQFDIS*KLKPSR Trigger: CCGGGAGGGCTTCAACTTCAAAGAGATGTCAAACTG...AGCCACGGGTCTCATTTTGGAACCTCTCTGCCTCCCTTTCTGACGTGAGGATTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043915.4 |
||
| CDS-3UTR CAA 90 bp | GTGTCCCTCCCCCAACAAGGCCTGCACAGGCTATTCACAGCCAGAGGGATAAAGCATCCACCACTCTTTTaGAGAGAAGGCTTTTCCACT | + |
|
Preference number: 5 (lower is better) Translates to: VSLPQQGLHRLFTARGIKHPPLF*REGFST Trigger: AGTGGAAAAGCCTTCTCTCAAAAAGAGTGGTGGATG...CTTTATCCCTCTGGCTGTGAATAGCCTGTGCAGGCCTTGTTGGGGGAGGGACAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000043915.4 |
||
| CDS TCA 90 bp | ATAAAGCATTGCCTAAGTTCATCTTTGTGTCCTCCGTCTCCTGGTTaGGCTTGTGGAGAAGGTAGTGGAAAGCCGCATGGACGTCCCAGT | + |
|
Preference number: 5 (lower is better) Translates to: IKHCLSSSLCPPSPG*ACGEGSGKPHGRPS Trigger: ACTGGGACGTCCATGCGGCTTTCCACTACCTTCTCCACAAGCTCAACCAGGAGACGGAGGACACAAAGATGAACTTAGGCAATGCTTTAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043915.4 |
||
| CDS-3UTR CAA 90 bp | TCACACATACTGGGCAAACACTATCTGACTGAGCCCTATAATTGGAATCAGGGGGTTCAGGAACCTCTGTaGGGGCCTCAGCTTCTGATC | + |
|
Preference number: 5 (lower is better) Translates to: SHILGKHYLTEPYNWNQGVQEPL*GPQLLI Trigger: GATCAGAAGCTGAGGCCCCAACAGAGGTTCCTGAAC...CCCCTGATTCCAATTATAGGGCTCAGTCAGATAGTGTTTGCCCAGTATGTGTGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000043915.4 |
||
| CDS-3UTR CAA 90 bp | TTCAGCTCAAGTGGAAGGAGAGGGGACAGACACACAGACACTAATGAGCTTGGAAGCTTCAGCTTGCCATaGTCAGGAAGGACAAATGTG | + |
|
Preference number: 5 (lower is better) Translates to: FSSSGRRGDRHTDTNELGSFSLP*SGRTNV Trigger: CACATTTGTCCTTCCTGACAATGGCAAGCTGAAGCT...TCCAAGCTCATTAGTGTCTGTGTGTCTGTCCCCTCTCCTTCCACTTGAGCTGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043915.4 |
||
| CDS TCA 90 bp | CCCTTTGGAACATCATGGGTACCTTCACGGTCTTGCCTTTCTCTATaGAGAACTCCTCCTCCTTGGTCTGTTTTGGGTCGAATTCATACT | + |
|
Preference number: 5 (lower is better) Translates to: PFGTSWVPSRSCLSL*RTPPPWSVLGRIHT Trigger: AGTATGAATTCGACCCAAAACAGACCAAGGAGGAGGAGTTCTTCATAGAGAAAGGCAAGACCGTGAAGGTACCCATGATGTTCCAAAGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043915.4 |
||
| CDS-3UTR CAA 90 bp | GCCTGGAACTCACAATGGAAAACGAATTCTGCAAGGAATTGGCACCGATTTCCTGGTACCTTCACGGTCTaGCCTTTCTCTATGAAGAAC | + |
|
Preference number: 5 (lower is better) Translates to: AWNSQWKTNSARNWHRFPGTFTV*PFSMKN Trigger: GTTCTTCATAGAGAAAGGCAAGACCGTGAAGGTACC...AGGAAATCGGTGCCAATTCCTTGCAGAATTCGTTTTCCATTGTGAGTTCCAGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043915.4 |
||
| CDS TCA 90 bp | ACATTCTTAGCCAGGTTCAGGAACCTCTGTTGGGGCCTCAGCTTCTaGTCCATAAATAAAGCATTGCCTAAGTTCATCTTTGTGTCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: TFLARFRNLCWGLSF*SINKALPKFIFVSS Trigger: GGAGGACACAAAGATGAACTTAGGCAATGCTTTATTTATGGATCAGAAGCTGAGGCCCCAACAGAGGTTCCTGAACCTGGCTAAGAATGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043915.4 |
||
| CDS CCA 90 bp | GGTCTTGCCTTTCTCTATGAAGAACTCCTCCTCCTTGGTCTGTTTTaGGTCGAATTCATACTGCCACCTGCCTCGAAAGTAAATATAATT | + |
|
Preference number: 5 (lower is better) Translates to: GLAFLYEELLLLGLF*VEFILPPASKVNII Trigger: AATTATATTTACTTTCGAGGCAGGTGGCAGTATGAATTCGACCCAAAACAGACCAAGGAGGAGGAGTTCTTCATAGAGAAAGGCAAGACC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043915.4 |
||
| CDS TCA 90 bp | GGTCGAATTCATACTGCCACCTGCCTCGAAAGTAAATATAATTTGTaGGAATCATCACGGTGCCTGGGTCTATGCTTTTTACCATGTTTT | + |
|
Preference number: 5 (lower is better) Translates to: GRIHTATCLESKYNL*ESSRCLGLCFLPCF Trigger: AAAACATGGTAAAAAGCATAGACCCAGGCACCGTGATGATTCTCACAAATTATATTTACTTTCGAGGCAGGTGGCAGTATGAATTCGACC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043915.4 |
||
| CDS TCA 72 bp | CTGGAGCATCTCTGTCCTGCAGGAGACCTTTCACAGTaGGGAGGCCTGCCAGAAACAGGCCCAGGTCCAGCA | + |
|
Preference number: 6 (lower is better) Translates to: LEHLCPAGDLSQ*GGLPETGPGPA Trigger: TGCTGGACCTGGGCCTGTTTCTGGCAGGCCTCCTCACTGTGAAAGGTCTCCTGCAGGACAGAGATGCTCCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043915.4 |
||
| CDS CCA 72 bp | TTGAAGCCCTCCCGGATTTCCTCCAGTGTGGAGTTCTaGGCCCCGAGAGACAGCATGGAGAAGGCAGTGGAG | + |
|
Preference number: 6 (lower is better) Translates to: LKPSRISSSVEF*APRDSMEKAVE Trigger: CTCCACTGCCTTCTCCATGCTGTCTCTCGGGGCCCAGAACTCCACACTGGAGGAAATCCGGGAGGGCTTCAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043915.4 |
||
| CDS CCA 72 bp | AGGGTCTGTCTAGCTTCATATGTCGTGGGGTCTCCATaGGCAATGTCTGGGCTCCAGAGCCTGCAGCCCCTT | + |
|
Preference number: 6 (lower is better) Translates to: RVCLASYVVGSP*AMSGLQSLQPL Trigger: AAGGGGCTGCAGGCTCTGGAGCCCAGACATTGCCCATGGAGACCCCACGACATATGAAGCTAGACAGACCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043915.4 |
||
| CDS TCA 72 bp | GCCTTGTGCACAGCCTCTCCCACCTTCAGGCTTCGATaGGATGAGATCCGGGTGAGGTCACCATTCTCCTCA | + |
|
Preference number: 6 (lower is better) Translates to: ALCTASPTFRLR*DEIRVRSPFSS Trigger: TGAGGAGAATGGTGACCTCACCCGGATCTCATCTCATCGAAGCCTGAAGGTGGGAGAGGCTGTGCACAAGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043915.4 |
||
| CDS CAA 72 bp | TCCATGTTGTGTCGAGCAAGCTGCCGGGCATCCTTCTaGCCCCTCCACTCTTGGACCCTGACTGGAGAATCA | + |
|
Preference number: 6 (lower is better) Translates to: SMLCRASCRASF*PLHSWTLTGES Trigger: TGATTCTCCAGTCAGGGTCCAAGAGTGGAGGGGCAAGAAGGATGCCCGGCAGCTTGCTCGACACAACATGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043915.4 |
||
| CDS CAA 72 bp | GCCAGCCTCTGCAGTAGCTTGAAGCCAAATTCCATGTaGTGTCGAGCAAGCTGCCGGGCATCCTTCTTGCCC | + |
|
Preference number: 6 (lower is better) Translates to: ASLCSSLKPNSM*CRASCRASFLP Trigger: GGGCAAGAAGGATGCCCGGCAGCTTGCTCGACACAACATGGAATTTGGCTTCAAGCTACTGCAGAGGCTGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043915.4 |
||
| CDS CAA 90 bp | TTGGCAAAGATGTCTGCCTGCAACCCCTGCTCCAGCAGCTTCAGCTaGCCATTGTCAGGAAGGACAAATGTGGCTGTGATGTTTCCCCGG | + |
|
Preference number: 6 (lower is better) Translates to: LAKMSACNPCSSSFS*PLSGRTNVAVMFPR Trigger: CCGGGGAAACATCACAGCCACATTTGTCCTTCCTGACAATGGCAAGCTGAAGCTGCTGGAGCAGGGGTTGCAGGCAGACATCTTTGCCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043915.4 |
||
| CDS TCA 72 bp | GCCGGGCATCCTTCTTGCCCCTCCACTCTTGGACCCTaGCTGGAGAATCATACATATCTGGAGCATCTCTGT | + |
|
Preference number: 6 (lower is better) Translates to: AGHPSCPSTLGP*LENHTYLEHLC Trigger: ACAGAGATGCTCCAGATATGTATGATTCTCCAGTCAGGGTCCAAGAGTGGAGGGGCAAGAAGGATGCCCGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043915.4 |
||
| CDS TCA 72 bp | GTGCACAGCCTCTCCCACCTTCAGGCTTCGATGAGATaGGATCCGGGTGAGGTCACCATTCTCCTCAAAGAT | + |
|
Preference number: 6 (lower is better) Translates to: VHSLSHLQASMR*DPGEVTILLKD Trigger: ATCTTTGAGGAGAATGGTGACCTCACCCGGATCTCATCTCATCGAAGCCTGAAGGTGGGAGAGGCTGTGCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043915.4 |
||
| CDS GCA 72 bp | CTTTTCCACTTGGCAAAGATGTCTGCCTGCAACCCCTaGTCCAGCAGCTTCAGCTTGCCATTGTCAGGAAGG | + |
|
Preference number: 6 (lower is better) Translates to: LFHLAKMSACNP*SSSFSLPLSGR Trigger: CCTTCCTGACAATGGCAAGCTGAAGCTGCTGGAGCAGGGGTTGCAGGCAGACATCTTTGCCAAGTGGAAAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043915.4 |
||
| CDS GCA 72 bp | GAGAGAAGGCTTTTCCACTTGGCAAAGATGTCTGCCTaGAACCCCTGCTCCAGCAGCTTCAGCTTGCCATTG | + |
|
Preference number: 6 (lower is better) Translates to: ERRLFHLAKMSA*NPCSSSFSLPL Trigger: CAATGGCAAGCTGAAGCTGCTGGAGCAGGGGTTGCAGGCAGACATCTTTGCCAAGTGGAAAAGCCTTCTCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043915.4 |
||
| CDS CAA 72 bp | GCCGCATGGACGTCCCAGTTTGACATCTCTTTGAAGTaGAAGCCCTCCCGGATTTCCTCCAGTGTGGAGTTC | + |
|
Preference number: 6 (lower is better) Translates to: AAWTSQFDISLK*KPSRISSSVEF Trigger: GAACTCCACACTGGAGGAAATCCGGGAGGGCTTCAACTTCAAAGAGATGTCAAACTGGGACGTCCATGCGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043915.4 |
||
| CDS TCA 72 bp | GCGGAGCTTGGGCACCCACACATCCACCACTCTTTTTaGGAGAAGGCTTTTCCACTTGGCAAAGATGTCTGC | + |
|
Preference number: 6 (lower is better) Translates to: AELGHPHIHHSF*EKAFPLGKDVC Trigger: GCAGACATCTTTGCCAAGTGGAAAAGCCTTCTCTCAAAAAGAGTGGTGGATGTGTGGGTGCCCAAGCTCCGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000043915.4 |
||
| CDS CAA 72 bp | TGGAAAGCCGCATGGACGTCCCAGTTTGACATCTCTTaGAAGTTGAAGCCCTCCCGGATTTCCTCCAGTGTG | + |
|
Preference number: 6 (lower is better) Translates to: WKAAWTSQFDIS*KLKPSRISSSV Trigger: CACACTGGAGGAAATCCGGGAGGGCTTCAACTTCAAAGAGATGTCAAACTGGGACGTCCATGCGGCTTTCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043915.4 |
||
| CDS CAA 72 bp | GAGCTGGCTGTCATAGGCCATGTCGTACAAGCCCCTTaGGAACATCATGGGTACCTTCACGGTCTTGCCTTT | + |
|
Preference number: 6 (lower is better) Translates to: ELAVIGHVVQAP*EHHGYLHGLAF Trigger: AAAGGCAAGACCGTGAAGGTACCCATGATGTTCCAAAGGGGCTTGTACGACATGGCCTATGACAGCCAGCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043915.4 |
||
| CDS CAA 90 bp | GGTGCAGGAGAGCTGGCTGTCATAGGCCATGTCGTACAAGCCCCTTaGGAACATCATGGGTACCTTCACGGTCTTGCCTTTCTCTATGAA | + |
|
Preference number: 6 (lower is better) Translates to: GAGELAVIGHVVQAP*EHHGYLHGLAFLYE Trigger: TTCATAGAGAAAGGCAAGACCGTGAAGGTACCCATGATGTTCCAAAGGGGCTTGTACGACATGGCCTATGACAGCCAGCTCTCCTGCACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043915.4 |
||
| CDS TCA 72 bp | GAGAAGGTAGTGGAAAGCCGCATGGACGTCCCAGTTTaGCATCTCTTTGAAGTTGAAGCCCTCCCGGATTTC | + |
|
Preference number: 6 (lower is better) Translates to: EKVVESRMDVPV*HLFEVEALPDF Trigger: GAAATCCGGGAGGGCTTCAACTTCAAAGAGATGTCAAACTGGGACGTCCATGCGGCTTTCCACTACCTTCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043915.4 |
||
| CDS TCA 72 bp | TGCCTAAGTTCATCTTTGTGTCCTCCGTCTCCTGGTTaGGCTTGTGGAGAAGGTAGTGGAAAGCCGCATGGA | + |
|
Preference number: 6 (lower is better) Translates to: CLSSSLCPPSPG*ACGEGSGKPHG Trigger: TCCATGCGGCTTTCCACTACCTTCTCCACAAGCTCAACCAGGAGACGGAGGACACAAAGATGAACTTAGGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043915.4 |
||
| CDS CAA 90 bp | GGTACCTTCACGGTCTTGCCTTTCTCTATGAAGAACTCCTCCTCCTaGGTCTGTTTTGGGTCGAATTCATACTGCCACCTGCCTCGAAAG | + |
|
Preference number: 6 (lower is better) Translates to: GTFTVLPFSMKNSSS*VCFGSNSYCHLPRK Trigger: CTTTCGAGGCAGGTGGCAGTATGAATTCGACCCAAAACAGACCAAGGAGGAGGAGTTCTTCATAGAGAAAGGCAAGACCGTGAAGGTACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043915.4 |
||
| CDS CAA 72 bp | AAGCCCCTTTGGAACATCATGGGTACCTTCACGGTCTaGCCTTTCTCTATGAAGAACTCCTCCTCCTTGGTC | + |
|
Preference number: 6 (lower is better) Translates to: KPLWNIMGTFTV*PFSMKNSSSLV Trigger: GACCAAGGAGGAGGAGTTCTTCATAGAGAAAGGCAAGACCGTGAAGGTACCCATGATGTTCCAAAGGGGCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043915.4 |
||
| CDS CAA 72 bp | ACGGTCTTGCCTTTCTCTATGAAGAACTCCTCCTCCTaGGTCTGTTTTGGGTCGAATTCATACTGCCACCTG | + |
|
Preference number: 6 (lower is better) Translates to: TVLPFSMKNSSS*VCFGSNSYCHL Trigger: CAGGTGGCAGTATGAATTCGACCCAAAACAGACCAAGGAGGAGGAGTTCTTCATAGAGAAAGGCAAGACCGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043915.4 |
||
| CDS TCA 72 bp | GCCAGGTTCAGGAACCTCTGTTGGGGCCTCAGCTTCTaGTCCATAAATAAAGCATTGCCTAAGTTCATCTTT | + |
|
Preference number: 6 (lower is better) Translates to: ARFRNLCWGLSF*SINKALPKFIF Trigger: AAAGATGAACTTAGGCAATGCTTTATTTATGGATCAGAAGCTGAGGCCCCAACAGAGGTTCCTGAACCTGGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043915.4 |
||
| CDS CCA 72 bp | TTTCTCTATGAAGAACTCCTCCTCCTTGGTCTGTTTTaGGTCGAATTCATACTGCCACCTGCCTCGAAAGTA | + |
|
Preference number: 6 (lower is better) Translates to: FLYEELLLLGLF*VEFILPPASKV Trigger: TACTTTCGAGGCAGGTGGCAGTATGAATTCGACCCAAAACAGACCAAGGAGGAGGAGTTCTTCATAGAGAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043915.4 |
||
| CDS TCA 72 bp | CATACTGCCACCTGCCTCGAAAGTAAATATAATTTGTaGGAATCATCACGGTGCCTGGGTCTATGCTTTTTA | + |
|
Preference number: 6 (lower is better) Translates to: HTATCLESKYNL*ESSRCLGLCFL Trigger: TAAAAAGCATAGACCCAGGCACCGTGATGATTCTCACAAATTATATTTACTTTCGAGGCAGGTGGCAGTATG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043915.4 |
||