Pregenerated sensors for SERPINA11 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000063232Ensembl transcript IDs: ENSMUST00000074693.13, ENSMUST00000120251.9, ENSMUST00000151709.3, ENSMUST00000176246.3
Found 38 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | AGACTGGGCAGGAACCGCTGGCCCCACCTTCTCAGCGTCTCTGGCTaGAGGGCAGCCTCTACCTGCTGCATCTTCCCAGGGTCAGGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: RLGRNRWPHLLSVSG*RAASTCCIFPGSGR Trigger: CCTCCCTGACCCTGGGAAGATGCAGCAGGTAGAGGCTGCCCTCCAGCCAGAGACGCTGAGAAGGTGGGGCCAGCGGTTCCTGCCCAGTCT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074693.13 ENSMUST00000120251.9 |
||
| CDS GCA 90 bp | GCTGCATCTTCCCAGGGTCAGGGAGGACCAGCAGCAGCAAGGCGGTaGCACTGTACTCGATCTGGAGGACAGTGCACGACGCCTCCTGGT | + |
|
Preference number: 5 (lower is better) Translates to: AASSQGQGGPAAARR*HCTRSGGQCTTPPG Trigger: ACCAGGAGGCGTCGTGCACTGTCCTCCAGATCGAGTACAGTGGCACCGCCTTGCTGCTGCTGGTCCTCCCTGACCCTGGGAAGATGCAGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074693.13 ENSMUST00000120251.9 |
||
| CDS CCA 90 bp | TCAGGGAGGACCAGCAGCAGCAAGGCGGTGCCACTGTACTCGATCTaGAGGACAGTGCACGACGCCTCCTGGTCGTACAGGAACCTGTGC | + |
|
Preference number: 5 (lower is better) Translates to: SGRTSSSKAVPLYSI*RTVHDASWSYRNLC Trigger: GCACAGGTTCCTGTACGACCAGGAGGCGTCGTGCACTGTCCTCCAGATCGAGTACAGTGGCACCGCCTTGCTGCTGCTGGTCCTCCCTGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074693.13 ENSMUST00000120251.9 |
||
| CDS GCA 90 bp | CCAGCAGCAGCAAGGCGGTGCCACTGTACTCGATCTGGAGGACAGTaGACGACGCCTCCTGGTCGTACAGGAACCTGTGCATTTCCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: PAAARRCHCTRSGGQ*TTPPGRTGTCAFPS Trigger: AGAAGGAAATGCACAGGTTCCTGTACGACCAGGAGGCGTCGTGCACTGTCCTCCAGATCGAGTACAGTGGCACCGCCTTGCTGCTGCTGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074693.13 ENSMUST00000120251.9 |
||
| CDS CCA 90 bp | GACCTTGTGATAGGCGGGTGCTGGCTCCAGGGACTGGTGACTGGCTaGTTGAGATGCCCCCAGACTCTTATCTCCATGGGCAGAAAATGG | + |
|
Preference number: 5 (lower is better) Translates to: DLVIGGCWLQGLVTG*LRCPQTLISMGRKW Trigger: CCATTTTCTGCCCATGGAGATAAGAGTCTGGGGGCATCTCAACCAGCCAGTCACCAGTCCCTGGAGCCAGCACCCGCCTATCACAAGGTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000074693.13 ENSMUST00000120251.9 ENSMUST00000151709.3 ENSMUST00000176246.3 |
||
| CDS CCA 90 bp | CAGGAACCTGTGCATTTCCTTCTGTCGCATCATGGGAATTCGGAGTaGCGTCCTCTGGTCCAGGGAGAAGCTCTCCTGCTTCCGGGTCTG | + |
|
Preference number: 5 (lower is better) Translates to: QEPVHFLLSHHGNSE*RPLVQGEALLLPGL Trigger: CAGACCCGGAAGCAGGAGAGCTTCTCCCTGGACCAGAGGACGCCACTCCGAATTCCCATGATGCGACAGAAGGAAATGCACAGGTTCCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000074693.13 ENSMUST00000120251.9 ENSMUST00000176246.3 |
||
| CDS CCA 90 bp | GCGGTGCCACTGTACTCGATCTGGAGGACAGTGCACGACGCCTCCTaGTCGTACAGGAACCTGTGCATTTCCTTCTGTCGCATCATGGGA | + |
|
Preference number: 5 (lower is better) Translates to: AVPLYSIWRTVHDAS*SYRNLCISFCRIMG Trigger: TCCCATGATGCGACAGAAGGAAATGCACAGGTTCCTGTACGACCAGGAGGCGTCGTGCACTGTCCTCCAGATCGAGTACAGTGGCACCGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074693.13 ENSMUST00000120251.9 |
||
| CDS GCA 90 bp | ATAGGCGGGTGCTGGCTCCAGGGACTGGTGACTGGCTGGTTGAGATaGCCCCAGACTCTTATCTCCATGGGCAGAAAATGGCTGACAATG | + |
|
Preference number: 5 (lower is better) Translates to: IGGCWLQGLVTGWLR*PQTLISMGRKWLTM Trigger: CATTGTCAGCCATTTTCTGCCCATGGAGATAAGAGTCTGGGGGCATCTCAACCAGCCAGTCACCAGTCCCTGGAGCCAGCACCCGCCTAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000074693.13 ENSMUST00000120251.9 ENSMUST00000151709.3 ENSMUST00000176246.3 |
||
| CDS GCA 90 bp | ATCTGGAGGACAGTGCACGACGCCTCCTGGTCGTACAGGAACCTGTaGATTTCCTTCTGTCGCATCATGGGAATTCGGAGTGGCGTCCTC | + |
|
Preference number: 5 (lower is better) Translates to: IWRTVHDASWSYRNL*ISFCRIMGIRSGVL Trigger: GAGGACGCCACTCCGAATTCCCATGATGCGACAGAAGGAAATGCACAGGTTCCTGTACGACCAGGAGGCGTCGTGCACTGTCCTCCAGAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074693.13 ENSMUST00000120251.9 |
||
| CDS CCA 90 bp | CCTCCTGGTCGTACAGGAACCTGTGCATTTCCTTCTGTCGCATCATaGGAATTCGGAGTGGCGTCCTCTGGTCCAGGGAGAAGCTCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: PPGRTGTCAFPSVAS*EFGVASSGPGRSSP Trigger: AGGAGAGCTTCTCCCTGGACCAGAGGACGCCACTCCGAATTCCCATGATGCGACAGAAGGAAATGCACAGGTTCCTGTACGACCAGGAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074693.13 ENSMUST00000120251.9 |
||
| CDS CCA 90 bp | AAGTTGCGGAAATTGAAAACCTTGGCAGGTGCAAATCCAACAGACTaGGCAGGAACCGCTGGCCCCACCTTCTCAGCGTCTCTGGCTGGA | + |
|
Preference number: 5 (lower is better) Translates to: KLRKLKTLAGANPTD*AGTAGPTFSASLAG Trigger: TCCAGCCAGAGACGCTGAGAAGGTGGGGCCAGCGGTTCCTGCCCAGTCTGTTGGATTTGCACCTGCCAAGGTTTTCAATTTCCGCAACTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000074693.13 ENSMUST00000120251.9 |
||
| CDS TCA 90 bp | ACCAATGAGGGGCAGGATCTCTTCCAGGTTGTAAGTTGCGGAAATTaGAAACCTTGGCAGGTGCAAATCCAACAGACTGGGCAGGAACCG | + |
|
Preference number: 5 (lower is better) Translates to: TNEGQDLFQVVSCGN*KPWQVQIQQTGQEP Trigger: CGGTTCCTGCCCAGTCTGTTGGATTTGCACCTGCCAAGGTTTTCAATTTCCGCAACTTACAACCTGGAAGAGATCCTGCCCCTCATTGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074693.13 ENSMUST00000120251.9 |
||
| CDS GCA 90 bp | TCCACGATGGCCTTGTGTGACACCCTGGAGACAGTTTTGTTGAGTTaGCCCATAATTCCTGATAAGTCAGCTTCCATGTCGAATAGGTTG | + |
|
Preference number: 5 (lower is better) Translates to: STMALCDTLETVLLS*PIIPDKSASMSNRL Trigger: CAACCTATTCGACATGGAAGCTGACTTATCAGGAATTATGGGGCAACTCAACAAAACTGTCTCCAGGGTGTCACACAAGGCCATCGTGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074693.13 ENSMUST00000120251.9 |
||
| CDS CCA 72 bp | GGGCAGGAACCGCTGGCCCCACCTTCTCAGCGTCTCTaGCTGGAGGGCAGCCTCTACCTGCTGCATCTTCCC | + |
|
Preference number: 6 (lower is better) Translates to: GQEPLAPPSQRL*LEGSLYLLHLP Trigger: GGGAAGATGCAGCAGGTAGAGGCTGCCCTCCAGCCAGAGACGCTGAGAAGGTGGGGCCAGCGGTTCCTGCCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074693.13 ENSMUST00000120251.9 |
||
| CDS GCA 72 bp | CTCAGCGTCTCTGGCTGGAGGGCAGCCTCTACCTGCTaGATCTTCCCAGGGTCAGGGAGGACCAGCAGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: LSVSGWRAASTC*IFPGSGRTSSS Trigger: GCTGCTGCTGGTCCTCCCTGACCCTGGGAAGATGCAGCAGGTAGAGGCTGCCCTCCAGCCAGAGACGCTGAG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074693.13 ENSMUST00000120251.9 |
||
| CDS GCA 72 bp | TCCCAGGGTCAGGGAGGACCAGCAGCAGCAAGGCGGTaGCACTGTACTCGATCTGGAGGACAGTGCACGACG | + |
|
Preference number: 6 (lower is better) Translates to: SQGQGGPAAARR*HCTRSGGQCTT Trigger: CGTCGTGCACTGTCCTCCAGATCGAGTACAGTGGCACCGCCTTGCTGCTGCTGGTCCTCCCTGACCCTGGGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074693.13 ENSMUST00000120251.9 |
||
| CDS CCA 72 bp | GGCAGGTGCAAATCCAACAGACTGGGCAGGAACCGCTaGCCCCACCTTCTCAGCGTCTCTGGCTGGAGGGCA | + |
|
Preference number: 6 (lower is better) Translates to: GRCKSNRLGRNR*PHLLSVSGWRA Trigger: TGCCCTCCAGCCAGAGACGCTGAGAAGGTGGGGCCAGCGGTTCCTGCCCAGTCTGTTGGATTTGCACCTGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074693.13 ENSMUST00000120251.9 |
||
| CDS GCA 72 bp | GCAAGGCGGTGCCACTGTACTCGATCTGGAGGACAGTaGACGACGCCTCCTGGTCGTACAGGAACCTGTGCA | + |
|
Preference number: 6 (lower is better) Translates to: ARRCHCTRSGGQ*TTPPGRTGTCA Trigger: TGCACAGGTTCCTGTACGACCAGGAGGCGTCGTGCACTGTCCTCCAGATCGAGTACAGTGGCACCGCCTTGC 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074693.13 ENSMUST00000120251.9 |
||
| CDS CCA 72 bp | ATAGGCGGGTGCTGGCTCCAGGGACTGGTGACTGGCTaGTTGAGATGCCCCCAGACTCTTATCTCCATGGGC | + |
|
Preference number: 6 (lower is better) Translates to: IGGCWLQGLVTG*LRCPQTLISMG Trigger: GCCCATGGAGATAAGAGTCTGGGGGCATCTCAACCAGCCAGTCACCAGTCCCTGGAGCCAGCACCCGCCTAT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000074693.13 ENSMUST00000120251.9 ENSMUST00000151709.3 ENSMUST00000176246.3 |
||
| CDS CCA 72 bp | TTCTGTCGCATCATGGGAATTCGGAGTGGCGTCCTCTaGTCCAGGGAGAAGCTCTCCTGCTTCCGGGTCTGG | + |
|
Preference number: 6 (lower is better) Translates to: FCRIMGIRSGVL*SREKLSCFRVW Trigger: CCAGACCCGGAAGCAGGAGAGCTTCTCCCTGGACCAGAGGACGCCACTCCGAATTCCCATGATGCGACAGAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000074693.13 ENSMUST00000120251.9 ENSMUST00000176246.3 |
||
| CDS CCA 72 bp | GCTGGGTTGACCACTTTCCCCAAGAAGAGCAGACTCTaGGTGGTCACCTCCCAGAGCAGAAGCAGGAAGGGC | + |
|
Preference number: 6 (lower is better) Translates to: AGLTTFPKKSRL*VVTSQSRSRKG Trigger: GCCCTTCCTGCTTCTGCTCTGGGAGGTGACCACCCAGAGTCTGCTCTTCTTGGGGAAAGTGGTCAACCCAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074693.13 ENSMUST00000120251.9 |
||
| CDS GCA 72 bp | CAGGCTCTCCAGAATTTGAGTCTGGGTGTCAGCATGTaGCCCAAGAGACAGCAGAGCCAGGCTGCTGGAGAG | + |
|
Preference number: 6 (lower is better) Translates to: QALQNLSLGVSM*PKRQQSQAAGE Trigger: CTCTCCAGCAGCCTGGCTCTGCTGTCTCTTGGGGCACATGCTGACACCCAGACTCAAATTCTGGAGAGCCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000074693.13 ENSMUST00000120251.9 ENSMUST00000151709.3 ENSMUST00000176246.3 |
||
| CDS CCA 72 bp | TGTGATAGGCGGGTGCTGGCTCCAGGGACTGGTGACTaGCTGGTTGAGATGCCCCCAGACTCTTATCTCCAT | + |
|
Preference number: 6 (lower is better) Translates to: CDRRVLAPGTGD*LVEMPPDSYLH Trigger: ATGGAGATAAGAGTCTGGGGGCATCTCAACCAGCCAGTCACCAGTCCCTGGAGCCAGCACCCGCCTATCACA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000074693.13 ENSMUST00000120251.9 ENSMUST00000151709.3 ENSMUST00000176246.3 |
||
| CDS GCA 72 bp | TGCTGGCTCCAGGGACTGGTGACTGGCTGGTTGAGATaGCCCCAGACTCTTATCTCCATGGGCAGAAAATGG | + |
|
Preference number: 6 (lower is better) Translates to: CWLQGLVTGWLR*PQTLISMGRKW Trigger: CCATTTTCTGCCCATGGAGATAAGAGTCTGGGGGCATCTCAACCAGCCAGTCACCAGTCCCTGGAGCCAGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000074693.13 ENSMUST00000120251.9 ENSMUST00000151709.3 ENSMUST00000176246.3 |
||
| CDS CCA 72 bp | CTGTACTCGATCTGGAGGACAGTGCACGACGCCTCCTaGTCGTACAGGAACCTGTGCATTTCCTTCTGTCGC | + |
|
Preference number: 6 (lower is better) Translates to: LYSIWRTVHDAS*SYRNLCISFCR Trigger: GCGACAGAAGGAAATGCACAGGTTCCTGTACGACCAGGAGGCGTCGTGCACTGTCCTCCAGATCGAGTACAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074693.13 ENSMUST00000120251.9 |
||
| CDS CCA 72 bp | GTGCATTTCCTTCTGTCGCATCATGGGAATTCGGAGTaGCGTCCTCTGGTCCAGGGAGAAGCTCTCCTGCTT | + |
|
Preference number: 6 (lower is better) Translates to: VHFLLSHHGNSE*RPLVQGEALLL Trigger: AAGCAGGAGAGCTTCTCCCTGGACCAGAGGACGCCACTCCGAATTCCCATGATGCGACAGAAGGAAATGCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000074693.13 ENSMUST00000120251.9 ENSMUST00000176246.3 |
||
| CDS CCA 72 bp | CGTACAGGAACCTGTGCATTTCCTTCTGTCGCATCATaGGAATTCGGAGTGGCGTCCTCTGGTCCAGGGAGA | + |
|
Preference number: 6 (lower is better) Translates to: RTGTCAFPSVAS*EFGVASSGPGR Trigger: TCTCCCTGGACCAGAGGACGCCACTCCGAATTCCCATGATGCGACAGAAGGAAATGCACAGGTTCCTGTACG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000074693.13 ENSMUST00000120251.9 ENSMUST00000176246.3 |
||
| CDS GCA 72 bp | ACAGTGCACGACGCCTCCTGGTCGTACAGGAACCTGTaGATTTCCTTCTGTCGCATCATGGGAATTCGGAGT | + |
|
Preference number: 6 (lower is better) Translates to: TVHDASWSYRNL*ISFCRIMGIRS Trigger: ACTCCGAATTCCCATGATGCGACAGAAGGAAATGCACAGGTTCCTGTACGACCAGGAGGCGTCGTGCACTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074693.13 ENSMUST00000120251.9 |
||
| CDS CCA 72 bp | AAATTGAAAACCTTGGCAGGTGCAAATCCAACAGACTaGGCAGGAACCGCTGGCCCCACCTTCTCAGCGTCT | + |
|
Preference number: 6 (lower is better) Translates to: KLKTLAGANPTD*AGTAGPTFSAS Trigger: AGACGCTGAGAAGGTGGGGCCAGCGGTTCCTGCCCAGTCTGTTGGATTTGCACCTGCCAAGGTTTTCAATTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000074693.13 ENSMUST00000120251.9 |
||
| CDS CAA 90 bp | ACTAGGTCATTGATCTGCTGCCCTGTGGCAGCTGCTTCTGTGAAGTaGGCAGAAAAGGCCAGAGCTCCATACAGTTCCTTGGCACTGTCC | + |
|
Preference number: 6 (lower is better) Translates to: TRSLICCPVAAASVK*AEKARAPYSSLALS Trigger: GGACAGTGCCAAGGAACTGTATGGAGCTCTGGCCTTTTCTGCCAACTTCACAGAAGCAGCTGCCACAGGGCAGCAGATCAATGACCTAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000074693.13 ENSMUST00000120251.9 ENSMUST00000151709.3 ENSMUST00000176246.3 |
||
| CDS TCA 72 bp | AGTTCCCTTCTCGTTCATGTCCACGATGGCCTTGTGTaGCACCCTGGAGACAGTTTTGTTGAGTTGCCCCAT | + |
|
Preference number: 6 (lower is better) Translates to: SSLLVHVHDGLV*HPGDSFVELPH Trigger: ATGGGGCAACTCAACAAAACTGTCTCCAGGGTGTCACACAAGGCCATCGTGGACATGAACGAGAAGGGAACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000074693.13 ENSMUST00000120251.9 |
||
| CDS CAA 72 bp | GGGGCAGGATCTCTTCCAGGTTGTAAGTTGCGGAAATaGAAAACCTTGGCAGGTGCAAATCCAACAGACTGG | + |
|
Preference number: 6 (lower is better) Translates to: GAGSLPGCKLRK*KTLAGANPTDW Trigger: CCAGTCTGTTGGATTTGCACCTGCCAAGGTTTTCAATTTCCGCAACTTACAACCTGGAAGAGATCCTGCCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000074693.13 ENSMUST00000120251.9 |
||
| CDS GCA 72 bp | GCCTTGTGTGACACCCTGGAGACAGTTTTGTTGAGTTaGCCCATAATTCCTGATAAGTCAGCTTCCATGTCG | + |
|
Preference number: 6 (lower is better) Translates to: ALCDTLETVLLS*PIIPDKSASMS Trigger: CGACATGGAAGCTGACTTATCAGGAATTATGGGGCAACTCAACAAAACTGTCTCCAGGGTGTCACACAAGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074693.13 ENSMUST00000120251.9 |
||
| CDS CAA 72 bp | ACGATGGCCTTGTGTGACACCCTGGAGACAGTTTTGTaGAGTTGCCCCATAATTCCTGATAAGTCAGCTTCC | + |
|
Preference number: 6 (lower is better) Translates to: TMALCDTLETVL*SCPIIPDKSAS Trigger: GGAAGCTGACTTATCAGGAATTATGGGGCAACTCAACAAAACTGTCTCCAGGGTGTCACACAAGGCCATCGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000074693.13 ENSMUST00000120251.9 |
||
| CDS CAA 72 bp | TCCACGATGGCCTTGTGTGACACCCTGGAGACAGTTTaGTTGAGTTGCCCCATAATTCCTGATAAGTCAGCT | + |
|
Preference number: 6 (lower is better) Translates to: STMALCDTLETV*LSCPIIPDKSA Trigger: AGCTGACTTATCAGGAATTATGGGGCAACTCAACAAAACTGTCTCCAGGGTGTCACACAAGGCCATCGTGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074693.13 ENSMUST00000120251.9 |
||
| CDS CAA 72 bp | ATAATTCCTGATAAGTCAGCTTCCATGTCGAATAGGTaGCCAAGACCAATGAGGGGCAGGATCTCTTCCAGG | + |
|
Preference number: 6 (lower is better) Translates to: IIPDKSASMSNR*PRPMRGRISSR Trigger: CCTGGAAGAGATCCTGCCCCTCATTGGTCTTGGCAACCTATTCGACATGGAAGCTGACTTATCAGGAATTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074693.13 ENSMUST00000120251.9 |
||
| CDS GCA 72 bp | GAGAAAAGGATGTTTCCCGCTACTTCCTCTGCTAGTTaGTTGTATAGACGCAAAGCAAAATTCGTAATGGTG | + |
|
Preference number: 6 (lower is better) Translates to: EKRMFPATSSAS*LYRRKAKFVMV Trigger: CACCATTACGAATTTTGCTTTGCGTCTATACAAGCAACTAGCAGAGGAAGTAGCGGGAAACATCCTTTTCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000074693.13 ENSMUST00000120251.9 ENSMUST00000151709.3 ENSMUST00000176246.3 |
||
| CDS CAA 72 bp | AAAAGGATGTTTCCCGCTACTTCCTCTGCTAGTTGCTaGTATAGACGCAAAGCAAAATTCGTAATGGTGGGT | + |
|
Preference number: 6 (lower is better) Translates to: KRMFPATSSASC*YRRKAKFVMVG Trigger: ACCCACCATTACGAATTTTGCTTTGCGTCTATACAAGCAACTAGCAGAGGAAGTAGCGGGAAACATCCTTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000074693.13 ENSMUST00000120251.9 ENSMUST00000151709.3 ENSMUST00000176246.3 |
||