Pregenerated sensors for SERPINA10 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000061947Ensembl transcript IDs: ENSMUST00000044231.12, ENSMUST00000121625.2
Found 151 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AGCATTCCTGTAGGAGAATGTCCATGTTCTCCCCAGACCCACACCTaGTCTGCTACTAACTGCTCTCAGTTCAGGCCTGCGAGCAGCAGA | + |
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Preference number: 1 (lower is better) Translates to: SIPVGECPCSPQTHT*SATNCSQFRPASSR Trigger: TCTGCTGCTCGCAGGCCTGAACTGAGAGCAGTTAGTAGCAGAGCAGGTGTGGGTCTGGGGAGAACATGGACATTCTCCTACAGGAATGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044231.12 |
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| 3UTR TCA 90 bp | ACTATGGTCACACTGAGTGGCCCTGGGCTGGTGTTTTACTCCCACTaGGATATAACATTTGACATACCTATCATGTGCAGTGGGCCCTGC | + |
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Preference number: 1 (lower is better) Translates to: TMVTLSGPGLVFYSH*DITFDIPIMCSGPC Trigger: GCAGGGCCCACTGCACATGATAGGTATGTCAAATGTTATATCTCAGTGGGAGTAAAACACCAGCCCAGGGCCACTCAGTGTGACCATAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044231.12 |
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| 3UTR CCA 90 bp | GTTTTAGTTTCAGTGTTAATCAGGGAACAGCCACAGCGAGCAGGCTaGGTACAGAGAACACATCCTTTCCCACCTACCACCAGCATCTTG | + |
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Preference number: 1 (lower is better) Translates to: VLVSVLIREQPQRAG*VQRTHPFPPTTSIL Trigger: CAAGATGCTGGTGGTAGGTGGGAAAGGATGTGTTCTCTGTACCCAGCCTGCTCGCTGTGGCTGTTCCCTGATTAACACTGAAACTAAAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044231.12 ENSMUST00000121625.2 |
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| 3UTR TCA 90 bp | GAGTGGCCCTGGGCTGGTGTTTTACTCCCACTGAGATATAACATTTaGCATACCTATCATGTGCAGTGGGCCCTGCACTCTATACAGTCA | + |
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Preference number: 1 (lower is better) Translates to: EWPWAGVLLPLRYNI*HTYHVQWALHSIQS Trigger: TGACTGTATAGAGTGCAGGGCCCACTGCACATGATAGGTATGTCAAATGTTATATCTCAGTGGGAGTAAAACACCAGCCCAGGGCCACTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044231.12 |
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| 3UTR CCA 90 bp | GAAGATAGAGTCCCAAAGCCTTGGAGTAGAATAAGAAAGAAGGATTaGCTCACTATGGTCACACTGAGTGGCCCTGGGCTGGTGTTTTAC | + |
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Preference number: 1 (lower is better) Translates to: EDRVPKPWSRIRKKD*LTMVTLSGPGLVFY Trigger: GTAAAACACCAGCCCAGGGCCACTCAGTGTGACCATAGTGAGCCAATCCTTCTTTCTTATTCTACTCCAAGGCTTTGGGACTCTATCTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044231.12 |
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| 3UTR TCA 90 bp | ATTAAAACATACTATAACACACACACACACACACACACACAGAGCTaGGTGTGGTGGTGCTCACCTTTAATTCTAGCACCCAGGAGGCAG | + |
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Preference number: 1 (lower is better) Translates to: IKTYYNTHTHTHTQS*VWWCSPLILAPRRQ Trigger: CTGCCTCCTGGGTGCTAGAATTAAAGGTGAGCACCACCACACTCAGCTCTGTGTGTGTGTGTGTGTGTGTGTGTTATAGTATGTTTTAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044231.12 |
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| 3UTR GCA 90 bp | CAATTCCTATCATTCACATGGTGGCTCACAGCCATCTATAACTGTTaGCCTCTGGGATCTGATGTCCTCTTCTGGTGTACAGATGAACAT | + |
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Preference number: 1 (lower is better) Translates to: QFLSFTWWLTAIYNC*PLGSDVLFWCTDEH Trigger: ATGTTCATCTGTACACCAGAAGAGGACATCAGATCCCAGAGGGCAACAGTTATAGATGGCTGTGAGCCACCATGTGAATGATAGGAATTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044231.12 |
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| 3UTR CCA 90 bp | TATCATTCACATGGTGGCTCACAGCCATCTATAACTGTTGCCCTCTaGGATCTGATGTCCTCTTCTGGTGTACAGATGAACATGCAAACA | + |
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Preference number: 1 (lower is better) Translates to: YHSHGGSQPSITVAL*DLMSSSGVQMNMQT Trigger: TGTTTGCATGTTCATCTGTACACCAGAAGAGGACATCAGATCCCAGAGGGCAACAGTTATAGATGGCTGTGAGCCACCATGTGAATGATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044231.12 |
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| 3UTR CCA 90 bp | CTAAAGATACATGCTTTAGAAAGGGAAGATAGAGTCCCAAAGCCTTaGAGTAGAATAAGAAAGAAGGATTGGCTCACTATGGTCACACTG | + |
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Preference number: 1 (lower is better) Translates to: LKIHALEREDRVPKP*SRIRKKDWLTMVTL Trigger: CAGTGTGACCATAGTGAGCCAATCCTTCTTTCTTATTCTACTCCAAGGCTTTGGGACTCTATCTTCCCTTTCTAAAGCATGTATCTTTAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044231.12 |
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| 3UTR TCA 90 bp | GCGTTTAAAATGCCAGACAGATTGAACAGACATCTCCTTAAAGTATaGGTTGTTTTAGTTTCAGTGTTAATCAGGGAACAGCCACAGCGA | + |
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Preference number: 1 (lower is better) Translates to: AFKMPDRLNRHLLKV*VVLVSVLIREQPQR Trigger: TCGCTGTGGCTGTTCCCTGATTAACACTGAAACTAAAACAACTCATACTTTAAGGAGATGTCTGTTCAATCTGTCTGGCATTTTAAACGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044231.12 |
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| 3UTR CCA 90 bp | ACAGCCATCTATAACTGTTGCCCTCTGGGATCTGATGTCCTCTTCTaGTGTACAGATGAACATGCAAACAAAACATTCATATACATTAAA | + |
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Preference number: 1 (lower is better) Translates to: TAIYNCCPLGSDVLF*CTDEHANKTFIYIK Trigger: TTTAATGTATATGAATGTTTTGTTTGCATGTTCATCTGTACACCAGAAGAGGACATCAGATCCCAGAGGGCAACAGTTATAGATGGCTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044231.12 |
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| 3UTR CAA 90 bp | GGCTGGGTACAGAGAACACATCCTTTCCCACCTACCACCAGCATCTaGTGTTTCAGACACCTCTGGCTCAGCAACCGTGGTGAACGAGGT | + |
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Preference number: 2 (lower is better) Translates to: GWVQRTHPFPPTTSI*CFRHLWLSNRGERG Trigger: ACCTCGTTCACCACGGTTGCTGAGCCAGAGGTGTCTGAAACACAAGATGCTGGTGGTAGGTGGGAAAGGATGTGTTCTCTGTACCCAGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044231.12 ENSMUST00000121625.2 |
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| 3UTR-3UTR CCA 90 bp | GAAGATAGAGTCCCAAAGCCTTGGAGTAGAATAAGAAAGAAGGATTGGCTCACTTGCGGGAGTGGGGGTTaGGTAGGAGAGGAGTGGAGG | + |
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Preference number: 2 (lower is better) Translates to: EDRVPKPWSRIRKKDWLTCGSGG*VGEEWR Trigger: CCTCCACTCCTCTCCTACCCAACCCCCACTCCCGCA...AGTGAGCCAATCCTTCTTTCTTATTCTACTCCAAGGCTTTGGGACTCTATCTTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044231.12 |
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| 3UTR-3UTR CCA 90 bp | AGCTTGGTCTACATAGAGTTCCAGGCCATCCAAGTCTTATGTTATAGGTCCCTGCCACAGCGAGCAGGCTaGGTACAGAGAACACATCCT | + |
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Preference number: 2 (lower is better) Translates to: SLVYIEFQAIQVLCYRSLPQRAG*VQRTHP Trigger: AGGATGTGTTCTCTGTACCCAGCCTGCTCGCTGTGG...CAGGGACCTATAACATAAGACTTGGATGGCCTGGAACTCTATGTAGACCAAGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044231.12 |
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| 3UTR-3UTR GCA 90 bp | ATTGAGGTGGGGACATCTGGCTTAGACTGCCTCTTGATGGAACCTCTTACTCATTGCTTTAGAGCTATCTaGATTCTCCTTTCATACTGG | + |
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Preference number: 2 (lower is better) Translates to: IEVGTSGLDCLLMEPLTHCFRAI*ILLSYW Trigger: CCAGTATGAAAGGAGAATGCAGATAGCTCTAAAGCA...ATGAGTAAGAGGTTCCATCAAGAGGCAGTCTAAGCCAGATGTCCCCACCTCAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044231.12 |
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| 3UTR-3UTR TCA 90 bp | GGACAAAGTCCATGCTTGCTTTTGTTCAAGCACAGTGGGCAACTGAGACAAAGGCTGAGATATAACATTTaGCATACCTATCATGTGCAG | + |
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Preference number: 2 (lower is better) Translates to: GQSPCLLLFKHSGQLRQRLRYNI*HTYHVQ Trigger: CTGCACATGATAGGTATGTCAAATGTTATATCTCAG...CCTTTGTCTCAGTTGCCCACTGTGCTTGAACAAAAGCAAGCATGGACTTTGTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044231.12 |
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| 3UTR GCA 72 bp | TGTTCTCCCCAGACCCACACCTGCTCTGCTACTAACTaGTCTCAGTTCAGGCCTGCGAGCAGCAGAGAAAGG | + |
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Preference number: 3 (lower is better) Translates to: CSPQTHTCSATN*SQFRPASSRER Trigger: CCTTTCTCTGCTGCTCGCAGGCCTGAACTGAGAGCAGTTAGTAGCAGAGCAGGTGTGGGTCTGGGGAGAACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044231.12 |
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| 3UTR CCA 72 bp | AAGTCTTATGTTATAGGTCCCTGCGGGAGTGGGGGTTaGGTAGGAGAGGAGTGGAGGGAGGAGAGGGAAGTG | + |
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Preference number: 3 (lower is better) Translates to: KSYVIGPCGSGG*VGEEWREEREV Trigger: CACTTCCCTCTCCTCCCTCCACTCCTCTCCTACCCAACCCCCACTCCCGCAGGGACCTATAACATAAGACTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044231.12 |
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| 3UTR GCA 72 bp | GTAGGAGAATGTCCATGTTCTCCCCAGACCCACACCTaGTCTGCTACTAACTGCTCTCAGTTCAGGCCTGCG | + |
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Preference number: 3 (lower is better) Translates to: VGECPCSPQTHT*SATNCSQFRPA Trigger: CGCAGGCCTGAACTGAGAGCAGTTAGTAGCAGAGCAGGTGTGGGTCTGGGGAGAACATGGACATTCTCCTAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044231.12 |
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| 3UTR CCA 72 bp | TCAGTGTTAATCAGGGAACAGCCACAGCGAGCAGGCTaGGTACAGAGAACACATCCTTTCCCACCTACCACC | + |
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Preference number: 3 (lower is better) Translates to: SVLIREQPQRAG*VQRTHPFPPTT Trigger: GGTGGTAGGTGGGAAAGGATGTGTTCTCTGTACCCAGCCTGCTCGCTGTGGCTGTTCCCTGATTAACACTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044231.12 ENSMUST00000121625.2 |
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| 3UTR-3UTR CAA 90 bp | TTAGTTTCAGTGTTAATCAGGGAACAGCCACAGCGAGCAGGCTGGGTACAGAGACCTACCACCAGCATCTaGTGTTTCAGACACCTCTGG | + |
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Preference number: 3 (lower is better) Translates to: LVSVLIREQPQRAGWVQRPTTSI*CFRHLW Trigger: CCAGAGGTGTCTGAAACACAAGATGCTGGTGGTAGG...TCTCTGTACCCAGCCTGCTCGCTGTGGCTGTTCCCTGATTAACACTGAAACTAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044231.12 ENSMUST00000121625.2 |
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| 3UTR CCA 72 bp | GTCCCAAAGCCTTGGAGTAGAATAAGAAAGAAGGATTaGCTCACTATGGTCACACTGAGTGGCCCTGGGCTG | + |
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Preference number: 3 (lower is better) Translates to: VPKPWSRIRKKD*LTMVTLSGPGL Trigger: CAGCCCAGGGCCACTCAGTGTGACCATAGTGAGCCAATCCTTCTTTCTTATTCTACTCCAAGGCTTTGGGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044231.12 |
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| 3UTR GCA 72 bp | TCATTCACATGGTGGCTCACAGCCATCTATAACTGTTaGCCTCTGGGATCTGATGTCCTCTTCTGGTGTACA | + |
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Preference number: 3 (lower is better) Translates to: SFTWWLTAIYNC*PLGSDVLFWCT Trigger: TGTACACCAGAAGAGGACATCAGATCCCAGAGGGCAACAGTTATAGATGGCTGTGAGCCACCATGTGAATGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044231.12 |
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| 3UTR CCA 72 bp | GAAGGATTGGCTCACTATGGTCACACTGAGTGGCCCTaGGCTGGTGTTTTACTCCCACTGAGATATAACATT | + |
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Preference number: 3 (lower is better) Translates to: EGLAHYGHTEWP*AGVLLPLRYNI Trigger: AATGTTATATCTCAGTGGGAGTAAAACACCAGCCCAGGGCCACTCAGTGTGACCATAGTGAGCCAATCCTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044231.12 |
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| 3UTR CCA 72 bp | AAGAAAGAAGGATTGGCTCACTATGGTCACACTGAGTaGCCCTGGGCTGGTGTTTTACTCCCACTGAGATAT | + |
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Preference number: 3 (lower is better) Translates to: KKEGLAHYGHTE*PWAGVLLPLRY Trigger: ATATCTCAGTGGGAGTAAAACACCAGCCCAGGGCCACTCAGTGTGACCATAGTGAGCCAATCCTTCTTTCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044231.12 |
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| 3UTR TCA 72 bp | TACTATAACACACACACACACACACACACACAGAGCTaGGTGTGGTGGTGCTCACCTTTAATTCTAGCACCC | + |
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Preference number: 3 (lower is better) Translates to: YYNTHTHTHTQS*VWWCSPLILAP Trigger: GGGTGCTAGAATTAAAGGTGAGCACCACCACACTCAGCTCTGTGTGTGTGTGTGTGTGTGTGTGTTATAGTA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044231.12 |
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| 3UTR TCA 72 bp | TGGGCTGGTGTTTTACTCCCACTGAGATATAACATTTaGCATACCTATCATGTGCAGTGGGCCCTGCACTCT | + |
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Preference number: 3 (lower is better) Translates to: WAGVLLPLRYNI*HTYHVQWALHS Trigger: AGAGTGCAGGGCCCACTGCACATGATAGGTATGTCAAATGTTATATCTCAGTGGGAGTAAAACACCAGCCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044231.12 |
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| 3UTR TCA 72 bp | ACACTGAGTGGCCCTGGGCTGGTGTTTTACTCCCACTaGGATATAACATTTGACATACCTATCATGTGCAGT | + |
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Preference number: 3 (lower is better) Translates to: TLSGPGLVFYSH*DITFDIPIMCS Trigger: ACTGCACATGATAGGTATGTCAAATGTTATATCTCAGTGGGAGTAAAACACCAGCCCAGGGCCACTCAGTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044231.12 |
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| 3UTR GCA 72 bp | ATAACATTTGACATACCTATCATGTGCAGTGGGCCCTaGACTCTATACAGTCAAGATCCTCCACAGCATCAA | + |
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Preference number: 3 (lower is better) Translates to: ITFDIPIMCSGP*TLYSQDPPQHQ Trigger: TTGATGCTGTGGAGGATCTTGACTGTATAGAGTGCAGGGCCCACTGCACATGATAGGTATGTCAAATGTTAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044231.12 |
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| 3UTR GCA 72 bp | TATCTGCATTCTCCTTTCATACTGGGACAAAGTCCATaGTTGCTTTTGTTCAAGCACAGTGGGCAACTGAGA | + |
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Preference number: 3 (lower is better) Translates to: YLHSPFILGQSP*LLLFKHSGQLR Trigger: TCTCAGTTGCCCACTGTGCTTGAACAAAAGCAAGCATGGACTTTGTCCCAGTATGAAAGGAGAATGCAGATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044231.12 |
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| 3UTR TCA 72 bp | TCTGAGACTAGTTGGTCTCTGATATCTAACACTCTCTaGTTCCCTCTAAAGCTCTGCCTTTATCTTGATAAG | + |
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Preference number: 3 (lower is better) Translates to: SETSWSLISNTL*FPLKLCLYLDK Trigger: CTTATCAAGATAAAGGCAGAGCTTTAGAGGGAATCAGAGAGTGTTAGATATCAGAGACCAACTAGTCTCAGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044231.12 |
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| 3UTR CCA 72 bp | TATAACTGTTGCCCTCTGGGATCTGATGTCCTCTTCTaGTGTACAGATGAACATGCAAACAAAACATTCATA | + |
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Preference number: 3 (lower is better) Translates to: YNCCPLGSDVLF*CTDEHANKTFI Trigger: TATGAATGTTTTGTTTGCATGTTCATCTGTACACCAGAAGAGGACATCAGATCCCAGAGGGCAACAGTTATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044231.12 |
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| CDS-3UTR CCA 90 bp | GCGAGCAGGCTGGGTACAGAGAACACATCCTTTCCCACCTACCACCAGCATCTTAAGGCAAAGCTACCCTaGCTGAGGCCCAGGTCCCGG | + |
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Preference number: 4 (lower is better) Translates to: ASRLGTENTSFPTYHQHLKAKLP*LRPRSR Trigger: CCGGGACCTGGGCCTCAGCCAGGGTAGCTTTGCCTT...AAGATGCTGGTGGTAGGTGGGAAAGGATGTGTTCTCTGTACCCAGCCTGCTCGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044231.12 ENSMUST00000121625.2 |
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| CDS-3UTR TCA 90 bp | CAGGCTGGGTACAGAGAACACATCCTTTCCCACCTACCACCAGCATCTTGTGTTCAAAGCTACCCTGGCTaGGGCCCAGGTCCCGGTTGC | + |
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Preference number: 4 (lower is better) Translates to: QAGYREHILSHLPPASCVQSYPG*GPGPGC Trigger: GCAACCGGGACCTGGGCCTCAGCCAGGGTAGCTTTG...AACACAAGATGCTGGTGGTAGGTGGGAAAGGATGTGTTCTCTGTACCCAGCCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044231.12 ENSMUST00000121625.2 |
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| CDS-3UTR TCA 90 bp | GAACAGCCACAGCGAGCAGGCTGGGTACAGAGAACACATCCTTTCCCACCTACCTTCGCTGAGGTCAGCTaGGGTGGAGAAGAGCCTCCT | + |
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Preference number: 4 (lower is better) Translates to: EQPQRAGWVQRTHPFPPTFAEVS*GGEEPP Trigger: AGGAGGCTCTTCTCCACCTCAGCTGACCTCAGCGAA...GGTAGGTGGGAAAGGATGTGTTCTCTGTACCCAGCCTGCTCGCTGTGGCTGTTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044231.12 ENSMUST00000121625.2 |
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| CDS-3UTR TCA 90 bp | CACAGCGAGCAGGCTGGGTACAGAGAACACATCCTTTCCCACCTACCACCAGCATGGCTGAGAGTTCGCTaGGGTCAGCTGAGGTGGAGA | + |
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Preference number: 4 (lower is better) Translates to: HSEQAGYREHILSHLPPAWLRVR*GQLRWR Trigger: TCTCCACCTCAGCTGACCTCAGCGAACTCTCAGCCA...TGCTGGTGGTAGGTGGGAAAGGATGTGTTCTCTGTACCCAGCCTGCTCGCTGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044231.12 ENSMUST00000121625.2 |
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| CDS-3UTR CCA 90 bp | AGTGTTAATCAGGGAACAGCCACAGCGAGCAGGCTGGGTACAGAGAACACATCCAAGGCAAAGCTACCCTaGCTGAGGCCCAGGTCCCGG | + |
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Preference number: 4 (lower is better) Translates to: SVNQGTATASRLGTENTSKAKLP*LRPRSR Trigger: CCGGGACCTGGGCCTCAGCCAGGGTAGCTTTGCCTT...GGATGTGTTCTCTGTACCCAGCCTGCTCGCTGTGGCTGTTCCCTGATTAACACT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044231.12 ENSMUST00000121625.2 |
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| CDS-3UTR TCA 90 bp | GGGTACAGAGAACACATCCTTTCCCACCTACCACCAGCATCTTGTGTTTCAGACCAAAGCTACCCTGGCTaGGGCCCAGGTCCCGGTTGC | + |
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Preference number: 4 (lower is better) Translates to: GYREHILSHLPPASCVSDQSYPG*GPGPGC Trigger: GCAACCGGGACCTGGGCCTCAGCCAGGGTAGCTTTG...GTCTGAAACACAAGATGCTGGTGGTAGGTGGGAAAGGATGTGTTCTCTGTACCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044231.12 ENSMUST00000121625.2 |
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| 3UTR CAA 72 bp | CAAGTCTTATGTTATAGGTCCCTGCGGGAGTGGGGGTaGGGTAGGAGAGGAGTGGAGGGAGGAGAGGGAAGT | + |
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Preference number: 4 (lower is better) Translates to: QVLCYRSLREWG*GRRGVEGGEGS Trigger: ACTTCCCTCTCCTCCCTCCACTCCTCTCCTACCCAACCCCCACTCCCGCAGGGACCTATAACATAAGACTTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044231.12 |
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| CDS-3UTR CCA 90 bp | GGCTGGGTACAGAGAACACATCCTTTCCCACCTACCACCAGCATCTTGTGTTTCCCTCCTCCTCCTCCCTaGGATCAGTCCGTGTGTACT | + |
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Preference number: 4 (lower is better) Translates to: GWVQRTHPFPPTTSILCFPPPPP*DQSVCT Trigger: AGTACACACGGACTGATCCCAGGGAGGAGGAGGAGG...GAAACACAAGATGCTGGTGGTAGGTGGGAAAGGATGTGTTCTCTGTACCCAGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044231.12 ENSMUST00000121625.2 |
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| CDS-3UTR CCA 90 bp | GTTTCAGTGTTAATCAGGGAACAGCCACAGCGAGCAGGCTGGGTACAGAGAACACCTCCTCCTCCTCCCTaGGATCAGTCCGTGTGTACT | + |
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Preference number: 4 (lower is better) Translates to: VSVLIREQPQRAGWVQRTPPPPP*DQSVCT Trigger: AGTACACACGGACTGATCCCAGGGAGGAGGAGGAGG...TGTTCTCTGTACCCAGCCTGCTCGCTGTGGCTGTTCCCTGATTAACACTGAAAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044231.12 ENSMUST00000121625.2 |
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| CDS-3UTR TCA 90 bp | TTAGTTTCAGTGTTAATCAGGGAACAGCCACAGCGAGCAGGCTGGGTACAGAGATGGCTGAGAGTTCGCTaGGGTCAGCTGAGGTGGAGA | + |
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Preference number: 4 (lower is better) Translates to: LVSVLIREQPQRAGWVQRWLRVR*GQLRWR Trigger: TCTCCACCTCAGCTGACCTCAGCGAACTCTCAGCCA...TCTCTGTACCCAGCCTGCTCGCTGTGGCTGTTCCCTGATTAACACTGAAACTAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044231.12 ENSMUST00000121625.2 |
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| CDS-3UTR TCA 90 bp | GGCTGGGTACAGAGAACACATCCTTTCCCACCTACCACCAGCATCTTGTGTTTCGTTTCTTGCCATGGCTaGGAGTTCGCTGAGGTCAGC | + |
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Preference number: 4 (lower is better) Translates to: GWVQRTHPFPPTTSILCFVSCHG*EFAEVS Trigger: GCTGACCTCAGCGAACTCTCAGCCATGGCAAGAAAC...GAAACACAAGATGCTGGTGGTAGGTGGGAAAGGATGTGTTCTCTGTACCCAGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044231.12 ENSMUST00000121625.2 |
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| 3UTR CAA 72 bp | CAGAGAACACATCCTTTCCCACCTACCACCAGCATCTaGTGTTTCAGACACCTCTGGCTCAGCAACCGTGGT | + |
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Preference number: 4 (lower is better) Translates to: QRTHPFPPTTSI*CFRHLWLSNRG Trigger: ACCACGGTTGCTGAGCCAGAGGTGTCTGAAACACAAGATGCTGGTGGTAGGTGGGAAAGGATGTGTTCTCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044231.12 ENSMUST00000121625.2 |
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| CDS-3UTR TCA 90 bp | AGTTTCAGTGTTAATCAGGGAACAGCCACAGCGAGCAGGCTGGGTACAGAGAACCAAAGTCCTTGTGGATaGAGGCAAAGCTACCCTGGC | + |
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Preference number: 4 (lower is better) Translates to: SFSVNQGTATASRLGTENQSPCG*RQSYPG Trigger: GCCAGGGTAGCTTTGCCTTCATCCACAAGGACTTTG...GTTCTCTGTACCCAGCCTGCTCGCTGTGGCTGTTCCCTGATTAACACTGAAACT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044231.12 ENSMUST00000121625.2 |
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| CDS-3UTR TCA 90 bp | TGGGTACAGAGAACACATCCTTTCCCACCTACCACCAGCATCTTGTGTTTCAGATTCGCTGAGGTCAGCTaGGGTGGAGAAGAGCCTCCT | + |
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Preference number: 4 (lower is better) Translates to: WVQRTHPFPPTTSILCFRFAEVS*GGEEPP Trigger: AGGAGGCTCTTCTCCACCTCAGCTGACCTCAGCGAA...TCTGAAACACAAGATGCTGGTGGTAGGTGGGAAAGGATGTGTTCTCTGTACCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044231.12 ENSMUST00000121625.2 |
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| CDS-3UTR TCA 90 bp | AAAAATGTGCCTGTCACTCGTGAAAACCCAGATGTGGCCTTTGCTCTGGCCTCTAAGGCCGGTTCACTTTaGTGGCAGGAGGCATGGAGT | + |
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Preference number: 4 (lower is better) Translates to: KNVPVTRENPDVAFALASKAGSL*WQEAWS Trigger: ACTCCATGCCTCCTGCCATCAAAGTGAACCGGCCTT...AGAGGCCAGAGCAAAGGCCACATCTGGGTTTTCACGAGTGACAGGCACATTTTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044231.12 |
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| CDS-3UTR TCA 90 bp | CTGGGTACAGAGAACACATCCTTTCCCACCTACCACCAGCATCTTGTGTTTCAGAAGGCCGGTTCACTTTaGTGGCAGGAGGCATGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: LGTENTSFPTYHQHLVFQKAGSL*WQEAWS Trigger: ACTCCATGCCTCCTGCCATCAAAGTGAACCGGCCTT...CTGAAACACAAGATGCTGGTGGTAGGTGGGAAAGGATGTGTTCTCTGTACCCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044231.12 ENSMUST00000121625.2 |
||
| CDS-3UTR CCA 90 bp | GAACAGCCACAGCGAGCAGGCTGGGTACAGAGAACACATCCTTTCCCACCTACCGAAGCCTCTGGTGAATaGGAGCTGAGATTGAAACTA | + |
|
Preference number: 4 (lower is better) Translates to: EQPQRAGWVQRTHPFPPTEASGE*ELRLKL Trigger: TAGTTTCAATCTCAGCTCCCATTCACCAGAGGCTTC...GGTAGGTGGGAAAGGATGTGTTCTCTGTACCCAGCCTGCTCGCTGTGGCTGTTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044231.12 ENSMUST00000121625.2 |
||
| CDS-3UTR CCA 90 bp | AGTTTCAGTGTTAATCAGGGAACAGCCACAGCGAGCAGGCTGGGTACAGAGAACTGCCGTCGTGCCTCATaGAGATCTTTCGAAGCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: SFSVNQGTATASRLGTENCRRAS*RSFEAG Trigger: ACCTGCTTCGAAAGATCTCCATGAGGCACGACGGCA...GTTCTCTGTACCCAGCCTGCTCGCTGTGGCTGTTCCCTGATTAACACTGAAACT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044231.12 ENSMUST00000121625.2 |
||
| CDS-3UTR CCA 90 bp | CGAGCAGGCTGGGTACAGAGAACACATCCTTTCCCACCTACCACCAGCATCTTGGCATCAAATTCACCATaGCCACAGACAGGCCAAAAG | + |
|
Preference number: 4 (lower is better) Translates to: RAGWVQRTHPFPPTTSILASNSP*PQTGQK Trigger: CTTTTGGCCTGTCTGTGGCCATGGTGAATTTGATGC...CAAGATGCTGGTGGTAGGTGGGAAAGGATGTGTTCTCTGTACCCAGCCTGCTCG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044231.12 ENSMUST00000121625.2 |
||
| CDS-3UTR CCA 90 bp | AGAGGAAAAATGTGCCTGTCACTCGTGAAAACCCAGATGTGGCCTTTGCTCTGGCTTCTTGAAGAGGGCTaGAAGGATCAGGGGTCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: RGKMCLSLVKTQMWPLLWLLEEG*KDQGSC Trigger: GCAGGACCCCTGATCCTTCCAGCCCTCTTCAAGAAG...CCAGAGCAAAGGCCACATCTGGGTTTTCACGAGTGACAGGCACATTTTTCCTCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000044231.12 |
||
| CDS-3UTR CCA 90 bp | GGGTACAGAGAACACATCCTTTCCCACCTACCACCAGCATCTTGTGTTTCAGACCTTCTTGAAGAGGGCTaGAAGGATCAGGGGTCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: GYREHILSHLPPASCVSDLLEEG*KDQGSC Trigger: GCAGGACCCCTGATCCTTCCAGCCCTCTTCAAGAAG...GTCTGAAACACAAGATGCTGGTGGTAGGTGGGAAAGGATGTGTTCTCTGTACCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044231.12 ENSMUST00000121625.2 |
||
| CDS-3UTR CCA 90 bp | CACAGCGAGCAGGCTGGGTACAGAGAACACATCCTTTCCCACCTACCACCAGCATCTTTGACAATGCAGTaGTTTATGAGCCCTCTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: HSEQAGYREHILSHLPPASLTMQ*FMSPLA Trigger: AGCCAGAGGGCTCATAAACCACTGCATTGTCAAAGA...TGCTGGTGGTAGGTGGGAAAGGATGTGTTCTCTGTACCCAGCCTGCTCGCTGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044231.12 ENSMUST00000121625.2 |
||
| CDS-3UTR CCA 90 bp | GTTTCAGTGTTAATCAGGGAACAGCCACAGCGAGCAGGCTGGGTACAGAGAACAGGACCACTAGCATGGTaGCATTTCCTTGGTAGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: VSVLIREQPQRAGWVQRTGPLAW*HFLGRA Trigger: TGCCCTACCAAGGAAATGCCACCATGCTAGTGGTCC...TGTTCTCTGTACCCAGCCTGCTCGCTGTGGCTGTTCCCTGATTAACACTGAAAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044231.12 |
||
| CDS-3UTR TCA 90 bp | GTTTCAGTGTTAATCAGGGAACAGCCACAGCGAGCAGGCTGGGTACAGAGAACAAACGGAAGCCTCTGGTaGATGGGAGCTGAGATTGAA | + |
|
Preference number: 4 (lower is better) Translates to: VSVLIREQPQRAGWVQRTNGSLW*MGAEIE Trigger: TTCAATCTCAGCTCCCATTCACCAGAGGCTTCCGTT...TGTTCTCTGTACCCAGCCTGCTCGCTGTGGCTGTTCCCTGATTAACACTGAAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044231.12 ENSMUST00000121625.2 |
||
| CDS-3UTR TCA 90 bp | AGAGGAAAAATGTGCCTGTCACTCGTGAAAACCCAGATGTGGCCTTTGCTCTGGTCATTGGAGAGCTGCTaGCTGGCCCTCAGCCAATAT | + |
|
Preference number: 4 (lower is better) Translates to: RGKMCLSLVKTQMWPLLWSLESC*LALSQY Trigger: ATATTGGCTGAGGGCCAGTCAGCAGCTCTCCAATGA...CCAGAGCAAAGGCCACATCTGGGTTTTCACGAGTGACAGGCACATTTTTCCTCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044231.12 |
||
| CDS-3UTR TCA 90 bp | TTAGTTTCAGTGTTAATCAGGGAACAGCCACAGCGAGCAGGCTGGGTACAGAGATCATTGGAGAGCTGCTaGCTGGCCCTCAGCCAATAT | + |
|
Preference number: 4 (lower is better) Translates to: LVSVLIREQPQRAGWVQRSLESC*LALSQY Trigger: ATATTGGCTGAGGGCCAGTCAGCAGCTCTCCAATGA...TCTCTGTACCCAGCCTGCTCGCTGTGGCTGTTCCCTGATTAACACTGAAACTAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044231.12 ENSMUST00000121625.2 |
||
| CDS-3UTR TCA 90 bp | GTTTCAGTGTTAATCAGGGAACAGCCACAGCGAGCAGGCTGGGTACAGAGAACAAGACAGGCCAAAAGGTaGGAAGATCACATTGCCGTC | + |
|
Preference number: 4 (lower is better) Translates to: VSVLIREQPQRAGWVQRTRQAKR*EDHIAV Trigger: GACGGCAATGTGATCTTCTCACCTTTTGGCCTGTCT...TGTTCTCTGTACCCAGCCTGCTCGCTGTGGCTGTTCCCTGATTAACACTGAAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044231.12 ENSMUST00000121625.2 |
||
| CDS-3UTR TCA 90 bp | AGAGGAAAAATGTGCCTGTCACTCGTGAAAACCCAGATGTGGCCTTTGCTCTGGCAAAGTCCTTGTGGATaGAGGCAAAGCTACCCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: RGKMCLSLVKTQMWPLLWQSPCG*RQSYPG Trigger: GCCAGGGTAGCTTTGCCTTCATCCACAAGGACTTTG...CCAGAGCAAAGGCCACATCTGGGTTTTCACGAGTGACAGGCACATTTTTCCTCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044231.12 |
||
| CDS-3UTR TCA 90 bp | ATTGAGGTGGGGACATCTGGCTTAGACTGCCTCTTGATGGAACCTCTTACTCATGTTTCTTGCCATGGCTaGGAGTTCGCTGAGGTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: IEVGTSGLDCLLMEPLTHVSCHG*EFAEVS Trigger: GCTGACCTCAGCGAACTCTCAGCCATGGCAAGAAAC...ATGAGTAAGAGGTTCCATCAAGAGGCAGTCTAAGCCAGATGTCCCCACCTCAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044231.12 |
||
| CDS-3UTR GCA 90 bp | ATAAGAAAGAAGGATTGGCTCACTATGGTCACACTGAGTGGCCCTGGGCTGGTGGTGAGAAGATCACATTaGCGTCGTGCCTCATGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: IRKKDWLTMVTLSGPGLVVRRSH*RRASWR Trigger: TCTCCATGAGGCACGACGGCAATGTGATCTTCTCAC...CACCAGCCCAGGGCCACTCAGTGTGACCATAGTGAGCCAATCCTTCTTTCTTAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044231.12 |
||
| CDS-3UTR GCA 90 bp | GTTTCAGTGTTAATCAGGGAACAGCCACAGCGAGCAGGCTGGGTACAGAGAACACATGGGCACCTTAATTaGCCTGTACTTGTCCAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: VSVLIREQPQRAGWVQRTHGHLN*PVLVQV Trigger: CACCTGGACAAGTACAGGGCAATTAAGGTGCCCATG...TGTTCTCTGTACCCAGCCTGCTCGCTGTGGCTGTTCCCTGATTAACACTGAAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044231.12 |
||
| CDS-3UTR GCA 90 bp | ACAGCGAGCAGGCTGGGTACAGAGAACACATCCTTTCCCACCTACCACCAGCATCTGGTTTTCATATTCTaGAGCCATGTCTCCACGAGA | + |
|
Preference number: 4 (lower is better) Translates to: TASRLGTENTSFPTYHQHLVFIF*SHVSTR Trigger: TCTCGTGGAGACATGGCTGCAGAATATGAAAACCAG...ATGCTGGTGGTAGGTGGGAAAGGATGTGTTCTCTGTACCCAGCCTGCTCGCTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044231.12 ENSMUST00000121625.2 |
||
| CDS-3UTR CCA 90 bp | AGGCTGGGTACAGAGAACACATCCTTTCCCACCTACCACCAGCATCTTGTGTTTAGCTTGAAGTCTCATTaGAGAGCTGCTGACTGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: RLGTENTSFPTYHQHLVFSLKSH*RAADWP Trigger: GGGCCAGTCAGCAGCTCTCCAATGAGACTTCAAGCT...AAACACAAGATGCTGGTGGTAGGTGGGAAAGGATGTGTTCTCTGTACCCAGCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044231.12 ENSMUST00000121625.2 |
||
| CDS-3UTR CCA 90 bp | GAGCAGGCTGGGTACAGAGAACACATCCTTTCCCACCTACCACCAGCATCTTGTTTTCTATCTGGACTTTaGTCTCTCCCTTGGTCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: EQAGYREHILSHLPPASCFLSGL*SLPWSP Trigger: TGGGGACCAAGGGAGAGACCAAAGTCCAGATAGAAA...ACAAGATGCTGGTGGTAGGTGGGAAAGGATGTGTTCTCTGTACCCAGCCTGCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044231.12 ENSMUST00000121625.2 |
||
| CDS-3UTR CCA 90 bp | GAACAGCCACAGCGAGCAGGCTGGGTACAGAGAACACATCCTTTCCCACCTACCATATCAAAGTCCTTGTaGATGAAGGCAAAGCTACCC | + |
|
Preference number: 4 (lower is better) Translates to: EQPQRAGWVQRTHPFPPTISKSL*MKAKLP Trigger: GGGTAGCTTTGCCTTCATCCACAAGGACTTTGATAT...GGTAGGTGGGAAAGGATGTGTTCTCTGTACCCAGCCTGCTCGCTGTGGCTGTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044231.12 ENSMUST00000121625.2 |
||
| CDS-3UTR CCA 90 bp | GGGTACAGAGAACACATCCTTTCCCACCTACCACCAGCATCTTGTGTTTCAGACCTGTACTTGTCCAGGTaGAAAGTGTCGGCCTCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: GYREHILSHLPPASCVSDLYLSR*KVSASV Trigger: CACTGAGGCCGACACTTTCCACCTGGACAAGTACAG...GTCTGAAACACAAGATGCTGGTGGTAGGTGGGAAAGGATGTGTTCTCTGTACCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044231.12 |
||
| CDS-3UTR TCA 90 bp | TTAGTTTCAGTGTTAATCAGGGAACAGCCACAGCGAGCAGGCTGGGTACAGAGAAGACAGGCCAAAAGGTaGGAAGATCACATTGCCGTC | + |
|
Preference number: 4 (lower is better) Translates to: LVSVLIREQPQRAGWVQRRQAKR*EDHIAV Trigger: GACGGCAATGTGATCTTCTCACCTTTTGGCCTGTCT...TCTCTGTACCCAGCCTGCTCGCTGTGGCTGTTCCCTGATTAACACTGAAACTAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044231.12 ENSMUST00000121625.2 |
||
| CDS-3UTR TCA 90 bp | GGACAAAGTCCATGCTTGCTTTTGTTCAAGCACAGTGGGCAACTGAGACAAAGGCTTGGTAGGGCAGTTTaGGGATGTGACAGCGGAACT | + |
|
Preference number: 4 (lower is better) Translates to: GQSPCLLLFKHSGQLRQRLGRAV*GCDSGT Trigger: AGTTCCGCTGTCACATCCTCAAACTGCCCTACCAAG...CCTTTGTCTCAGTTGCCCACTGTGCTTGAACAAAAGCAAGCATGGACTTTGTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044231.12 |
||
| CDS-3UTR GCA 90 bp | GTTTCAGTGTTAATCAGGGAACAGCCACAGCGAGCAGGCTGGGTACAGAGAACAATCACATTGCCGTCGTaGCTCATGGAGATCTTTCGA | + |
|
Preference number: 4 (lower is better) Translates to: VSVLIREQPQRAGWVQRTITLPS*LMEIFR Trigger: TCGAAAGATCTCCATGAGGCACGACGGCAATGTGAT...TGTTCTCTGTACCCAGCCTGCTCGCTGTGGCTGTTCCCTGATTAACACTGAAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044231.12 ENSMUST00000121625.2 |
||
| CDS-3UTR GCA 90 bp | GGGTACAGAGAACACATCCTTTCCCACCTACCACCAGCATCTTGTGTTTCAGACGTGAGAAGATCACATTaGCGTCGTGCCTCATGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: GYREHILSHLPPASCVSDVRRSH*RRASWR Trigger: TCTCCATGAGGCACGACGGCAATGTGATCTTCTCAC...GTCTGAAACACAAGATGCTGGTGGTAGGTGGGAAAGGATGTGTTCTCTGTACCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044231.12 ENSMUST00000121625.2 |
||
| CDS-3UTR CCA 90 bp | TGTTTTAGTTTCAGTGTTAATCAGGGAACAGCCACAGCGAGCAGGCTGGGTACATGCCGTCGTGCCTCATaGAGATCTTTCGAAGCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: CFSFSVNQGTATASRLGTCRRAS*RSFEAG Trigger: ACCTGCTTCGAAAGATCTCCATGAGGCACGACGGCA...TGTACCCAGCCTGCTCGCTGTGGCTGTTCCCTGATTAACACTGAAACTAAAACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044231.12 ENSMUST00000121625.2 |
||
| CDS-3UTR CCA 90 bp | AGGCTGGGTACAGAGAACACATCCTTTCCCACCTACCACCAGCATCTTGTGTTTGAAGCTGGGGTCAAATaGAGTCAGCCACTTCCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: RLGTENTSFPTYHQHLVFEAGVK*SQPLPF Trigger: AAAGGGAAGTGGCTGACTCCATTTGACCCCAGCTTC...AAACACAAGATGCTGGTGGTAGGTGGGAAAGGATGTGTTCTCTGTACCCAGCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044231.12 |
||
| 3UTR CAA 72 bp | GAGCATAAGTACCCTGAATGCCAGCTAGAACCATCCTaGATCTCTCTTCCTAGTCCCCAGAGCTGTCTGAAC | + |
|
Preference number: 4 (lower is better) Translates to: EHKYPECQLEPS*ISLPSPQSCLN Trigger: GTTCAGACAGCTCTGGGGACTAGGAAGAGAGATCAAGGATGGTTCTAGCTGGCATTCAGGGTACTTATGCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044231.12 |
||
| CDS-3UTR TCA 90 bp | GGACAAAGTCCATGCTTGCTTTTGTTCAAGCACAGTGGGCAACTGAGACAAAGGAACGGAAGCCTCTGGTaGATGGGAGCTGAGATTGAA | + |
|
Preference number: 4 (lower is better) Translates to: GQSPCLLLFKHSGQLRQRNGSLW*MGAEIE Trigger: TTCAATCTCAGCTCCCATTCACCAGAGGCTTCCGTT...CCTTTGTCTCAGTTGCCCACTGTGCTTGAACAAAAGCAAGCATGGACTTTGTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044231.12 |
||
| CDS-3UTR TCA 90 bp | AGAGGAAAAATGTGCCTGTCACTCGTGAAAACCCAGATGTGGCCTTTGCTCTGGGTTGAACCCAAAGCTTaGAGTCTCATTGGAGAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: RGKMCLSLVKTQMWPLLWVEPKA*SLIGEL Trigger: CAGCTCTCCAATGAGACTTCAAGCTTTGGGTTCAAC...CCAGAGCAAAGGCCACATCTGGGTTTTCACGAGTGACAGGCACATTTTTCCTCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044231.12 |
||
| CDS-3UTR GCA 90 bp | AAAAATGTGCCTGTCACTCGTGAAAACCCAGATGTGGCCTTTGCTCTGGCCTCTATCACATTGCCGTCGTaGCTCATGGAGATCTTTCGA | + |
|
Preference number: 4 (lower is better) Translates to: KNVPVTRENPDVAFALASITLPS*LMEIFR Trigger: TCGAAAGATCTCCATGAGGCACGACGGCAATGTGAT...AGAGGCCAGAGCAAAGGCCACATCTGGGTTTTCACGAGTGACAGGCACATTTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044231.12 |
||
| CDS-3UTR GCA 90 bp | AGTTTCAGTGTTAATCAGGGAACAGCCACAGCGAGCAGGCTGGGTACAGAGAACCTGGTTTTCATATTCTaGAGCCATGTCTCCACGAGA | + |
|
Preference number: 4 (lower is better) Translates to: SFSVNQGTATASRLGTENLVFIF*SHVSTR Trigger: TCTCGTGGAGACATGGCTGCAGAATATGAAAACCAG...GTTCTCTGTACCCAGCCTGCTCGCTGTGGCTGTTCCCTGATTAACACTGAAACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044231.12 ENSMUST00000121625.2 |
||
| CDS-3UTR CCA 90 bp | CTGGGTACAGAGAACACATCCTTTCCCACCTACCACCAGCATCTTGTGTTTCAGTTTCTATCTGGACTTTaGTCTCTCCCTTGGTCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: LGTENTSFPTYHQHLVFQFLSGL*SLPWSP Trigger: TGGGGACCAAGGGAGAGACCAAAGTCCAGATAGAAA...CTGAAACACAAGATGCTGGTGGTAGGTGGGAAAGGATGTGTTCTCTGTACCCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044231.12 ENSMUST00000121625.2 |
||
| CDS-3UTR CCA 90 bp | AGTGTTAATCAGGGAACAGCCACAGCGAGCAGGCTGGGTACAGAGAACACATCCAGTCCATTTTCTATCTaGACTTTGGTCTCTCCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: SVNQGTATASRLGTENTSSPFSI*TLVSPL Trigger: CAAGGGAGAGACCAAAGTCCAGATAGAAAATGGACT...GGATGTGTTCTCTGTACCCAGCCTGCTCGCTGTGGCTGTTCCCTGATTAACACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044231.12 ENSMUST00000121625.2 |
||
| CDS-3UTR CCA 90 bp | GGCTGGGTACAGAGAACACATCCTTTCCCACCTACCACCAGCATCTTGTGTTTCTCTTTGACAATGCAGTaGTTTATGAGCCCTCTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: GWVQRTHPFPPTTSILCFSLTMQ*FMSPLA Trigger: AGCCAGAGGGCTCATAAACCACTGCATTGTCAAAGA...GAAACACAAGATGCTGGTGGTAGGTGGGAAAGGATGTGTTCTCTGTACCCAGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044231.12 ENSMUST00000121625.2 |
||
| CDS-3UTR CCA 90 bp | TGTTTTAGTTTCAGTGTTAATCAGGGAACAGCCACAGCGAGCAGGCTGGGTACAGCATCAAATTCACCATaGCCACAGACAGGCCAAAAG | + |
|
Preference number: 4 (lower is better) Translates to: CFSFSVNQGTATASRLGTASNSP*PQTGQK Trigger: CTTTTGGCCTGTCTGTGGCCATGGTGAATTTGATGC...TGTACCCAGCCTGCTCGCTGTGGCTGTTCCCTGATTAACACTGAAACTAAAACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044231.12 ENSMUST00000121625.2 |
||
| CDS-3UTR CCA 90 bp | GGACAAAGTCCATGCTTGCTTTTGTTCAAGCACAGTGGGCAACTGAGACAAAGGCTTTGGTCTCTCCCTTaGTCCCCAGCATCAAATTCA | + |
|
Preference number: 4 (lower is better) Translates to: GQSPCLLLFKHSGQLRQRLWSLP*SPASNS Trigger: TGAATTTGATGCTGGGGACCAAGGGAGAGACCAAAG...CCTTTGTCTCAGTTGCCCACTGTGCTTGAACAAAAGCAAGCATGGACTTTGTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044231.12 |
||
| CDS-3UTR CCA 90 bp | ACAGAGAACACATCCTTTCCCACCTACCACCAGCATCTTGTGTTTCAGACACCTCTTTGGTCTCTCCCTTaGTCCCCAGCATCAAATTCA | + |
|
Preference number: 4 (lower is better) Translates to: TENTSFPTYHQHLVFQTPLWSLP*SPASNS Trigger: TGAATTTGATGCTGGGGACCAAGGGAGAGACCAAAG...AGGTGTCTGAAACACAAGATGCTGGTGGTAGGTGGGAAAGGATGTGTTCTCTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044231.12 ENSMUST00000121625.2 |
||
| CDS-3UTR CCA 90 bp | AGTTTCAGTGTTAATCAGGGAACAGCCACAGCGAGCAGGCTGGGTACAGAGAACAGACCTCCATTTTCCTaGTTTTCATATTCTGCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: SFSVNQGTATASRLGTENRPPFS*FSYSAA Trigger: GGCTGCAGAATATGAAAACCAGGAAAATGGAGGTCT...GTTCTCTGTACCCAGCCTGCTCGCTGTGGCTGTTCCCTGATTAACACTGAAACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044231.12 ENSMUST00000121625.2 |
||
| CDS-3UTR CCA 90 bp | AAAAATGTGCCTGTCACTCGTGAAAACCCAGATGTGGCCTTTGCTCTGGCCTCTTGCATCTCATACCTCTaGTTCAGCTTGAACTTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: KNVPVTRENPDVAFALASCISYL*FSLNLG Trigger: TCCCAAGTTCAAGCTGAACCAGAGGTATGAGATGCA...AGAGGCCAGAGCAAAGGCCACATCTGGGTTTTCACGAGTGACAGGCACATTTTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044231.12 |
||
| CDS-3UTR CCA 90 bp | CTGGGTACAGAGAACACATCCTTTCCCACCTACCACCAGCATCTTGTGTTTCAGTGCATCTCATACCTCTaGTTCAGCTTGAACTTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: LGTENTSFPTYHQHLVFQCISYL*FSLNLG Trigger: TCCCAAGTTCAAGCTGAACCAGAGGTATGAGATGCA...CTGAAACACAAGATGCTGGTGGTAGGTGGGAAAGGATGTGTTCTCTGTACCCAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044231.12 ENSMUST00000121625.2 |
||
| CDS-3UTR CCA 90 bp | GGACAAAGTCCATGCTTGCTTTTGTTCAAGCACAGTGGGCAACTGAGACAAAGGGAAGCCTCTGGTGAATaGGAGCTGAGATTGAAACTA | + |
|
Preference number: 4 (lower is better) Translates to: GQSPCLLLFKHSGQLRQREASGE*ELRLKL Trigger: TAGTTTCAATCTCAGCTCCCATTCACCAGAGGCTTC...CCTTTGTCTCAGTTGCCCACTGTGCTTGAACAAAAGCAAGCATGGACTTTGTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044231.12 |
||
| CDS-3UTR CCA 90 bp | GTTTTAGTTTCAGTGTTAATCAGGGAACAGCCACAGCGAGCAGGCTGGGTACAGAGTCCATTTTCTATCTaGACTTTGGTCTCTCCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: VLVSVLIREQPQRAGWVQSPFSI*TLVSPL Trigger: CAAGGGAGAGACCAAAGTCCAGATAGAAAATGGACT...CTGTACCCAGCCTGCTCGCTGTGGCTGTTCCCTGATTAACACTGAAACTAAAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044231.12 ENSMUST00000121625.2 |
||
| CDS-3UTR CCA 90 bp | TTAGTTTCAGTGTTAATCAGGGAACAGCCACAGCGAGCAGGCTGGGTACAGAGAATATCAAAGTCCTTGTaGATGAAGGCAAAGCTACCC | + |
|
Preference number: 4 (lower is better) Translates to: LVSVLIREQPQRAGWVQRISKSL*MKAKLP Trigger: GGGTAGCTTTGCCTTCATCCACAAGGACTTTGATAT...TCTCTGTACCCAGCCTGCTCGCTGTGGCTGTTCCCTGATTAACACTGAAACTAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044231.12 ENSMUST00000121625.2 |
||
| CDS-3UTR CCA 90 bp | TTTAGTTTCAGTGTTAATCAGGGAACAGCCACAGCGAGCAGGCTGGGTACAGAGAGACCTCCATTTTCCTaGTTTTCATATTCTGCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: FSFSVNQGTATASRLGTERPPFS*FSYSAA Trigger: GGCTGCAGAATATGAAAACCAGGAAAATGGAGGTCT...CTCTGTACCCAGCCTGCTCGCTGTGGCTGTTCCCTGATTAACACTGAAACTAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044231.12 ENSMUST00000121625.2 |
||
| CDS-3UTR CAA 90 bp | ACAGCGAGCAGGCTGGGTACAGAGAACACATCCTTTCCCACCTACCACCAGCATAGGCCCAGGTCCCGGTaGCTGGAGAAGGTCTCTTTG | + |
|
Preference number: 5 (lower is better) Translates to: TASRLGTENTSFPTYHQHRPRSR*LEKVSL Trigger: CAAAGAGACCTTCTCCAGCAACCGGGACCTGGGCCT...ATGCTGGTGGTAGGTGGGAAAGGATGTGTTCTCTGTACCCAGCCTGCTCGCTGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044231.12 ENSMUST00000121625.2 |
||
| CDS-3UTR CAA 90 bp | CCACAGCGAGCAGGCTGGGTACAGAGAACACATCCTTTCCCACCTACCACCAGCAAAGGCCGGTTCACTTaGATGGCAGGAGGCATGGAG | + |
|
Preference number: 5 (lower is better) Translates to: PQRAGWVQRTHPFPPTTSKGRFT*MAGGME Trigger: CTCCATGCCTCCTGCCATCAAAGTGAACCGGCCTTT...GCTGGTGGTAGGTGGGAAAGGATGTGTTCTCTGTACCCAGCCTGCTCGCTGTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044231.12 ENSMUST00000121625.2 |
||
| CDS-3UTR CAA 90 bp | GCGAGCAGGCTGGGTACAGAGAACACATCCTTTCCCACCTACCACCAGCATCTTGGTGAGAAGATCACATaGCCGTCGTGCCTCATGGAG | + |
|
Preference number: 5 (lower is better) Translates to: ASRLGTENTSFPTYHQHLGEKIT*PSCLME Trigger: CTCCATGAGGCACGACGGCAATGTGATCTTCTCACC...AAGATGCTGGTGGTAGGTGGGAAAGGATGTGTTCTCTGTACCCAGCCTGCTCGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044231.12 ENSMUST00000121625.2 |
||
| CDS-3UTR CAA 90 bp | ACAGCGAGCAGGCTGGGTACAGAGAACACATCCTTTCCCACCTACCACCAGCATAAAGGCCGGTTCACTTaGATGGCAGGAGGCATGGAG | + |
|
Preference number: 5 (lower is better) Translates to: TASRLGTENTSFPTYHQHKGRFT*MAGGME Trigger: CTCCATGCCTCCTGCCATCAAAGTGAACCGGCCTTT...ATGCTGGTGGTAGGTGGGAAAGGATGTGTTCTCTGTACCCAGCCTGCTCGCTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044231.12 ENSMUST00000121625.2 |
||
| CDS-3UTR CAA 90 bp | AGGCTGGGTACAGAGAACACATCCTTTCCCACCTACCACCAGCATCTTGTGTTTAGGCCCAGGTCCCGGTaGCTGGAGAAGGTCTCTTTG | + |
|
Preference number: 5 (lower is better) Translates to: RLGTENTSFPTYHQHLVFRPRSR*LEKVSL Trigger: CAAAGAGACCTTCTCCAGCAACCGGGACCTGGGCCT...AAACACAAGATGCTGGTGGTAGGTGGGAAAGGATGTGTTCTCTGTACCCAGCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044231.12 ENSMUST00000121625.2 |
||
| CDS GCA 90 bp | GGTGGAGGTAAAGTTCCCTTCCCGGTACATCATGGGCACCTTAATTaGCCTGTACTTGTCCAGGTGGAAAGTGTCGGCCTCAGTGAAGCT | + |
|
Preference number: 5 (lower is better) Translates to: GGGKVPFPVHHGHLN*PVLVQVESVGLSEA Trigger: AGCTTCACTGAGGCCGACACTTTCCACCTGGACAAGTACAGGGCAATTAAGGTGCCCATGATGTACCGGGAAGGGAACTTTACCTCCACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044231.12 |
||
| CDS-3UTR CAA 90 bp | CGAGCAGGCTGGGTACAGAGAACACATCCTTTCCCACCTACCACCAGCATCTTGGAATGGGAGCTGAGATaGAAACTAGTCACCAGCCAC | + |
|
Preference number: 5 (lower is better) Translates to: RAGWVQRTHPFPPTTSILEWELR*KLVTSH Trigger: GTGGCTGGTGACTAGTTTCAATCTCAGCTCCCATTC...CAAGATGCTGGTGGTAGGTGGGAAAGGATGTGTTCTCTGTACCCAGCCTGCTCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044231.12 ENSMUST00000121625.2 |
||
| CDS-3UTR CAA 90 bp | CACAGCGAGCAGGCTGGGTACAGAGAACACATCCTTTCCCACCTACCACCAGCACAATATTCCTCATCCTaGCCTTCCTCCTTTTCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: HSEQAGYREHILSHLPPAQYSSS*PSSFSS Trigger: GGAGGAAAAGGAGGAAGGCAAGGATGAGGAATATTG...TGCTGGTGGTAGGTGGGAAAGGATGTGTTCTCTGTACCCAGCCTGCTCGCTGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044231.12 ENSMUST00000121625.2 |
||
| CDS-3UTR CAA 90 bp | ATAAGAAAGAAGGATTGGCTCACTATGGTCACACTGAGTGGCCCTGGGCTGGTGGGTGAGAAGATCACATaGCCGTCGTGCCTCATGGAG | + |
|
Preference number: 5 (lower is better) Translates to: IRKKDWLTMVTLSGPGLVGEKIT*PSCLME Trigger: CTCCATGAGGCACGACGGCAATGTGATCTTCTCACC...CACCAGCCCAGGGCCACTCAGTGTGACCATAGTGAGCCAATCCTTCTTTCTTAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044231.12 |
||
| CDS-3UTR CAA 90 bp | CGAGCAGGCTGGGTACAGAGAACACATCCTTTCCCACCTACCACCAGCATCTTGCTGGAGAAGGTCTCTTaGACCTTCTTGAAGAGGGCT | + |
|
Preference number: 5 (lower is better) Translates to: RAGWVQRTHPFPPTTSILLEKVS*TFLKRA Trigger: AGCCCTCTTCAAGAAGGTCAAAGAGACCTTCTCCAG...CAAGATGCTGGTGGTAGGTGGGAAAGGATGTGTTCTCTGTACCCAGCCTGCTCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044231.12 ENSMUST00000121625.2 |
||
| CDS TCA 90 bp | AGATCACATTGCCGTCGTGCCTCATGGAGATCTTTCGAAGCAGGTTaGACCCAAAGCTTGAAGTCTCATTGGAGAGCTGCTGACTGGCCC | + |
|
Preference number: 5 (lower is better) Translates to: RSHCRRASWRSFEAG*TQSLKSHWRAADWP Trigger: GGGCCAGTCAGCAGCTCTCCAATGAGACTTCAAGCTTTGGGTTCAACCTGCTTCGAAAGATCTCCATGAGGCACGACGGCAATGTGATCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044231.12 ENSMUST00000121625.2 |
||
| CDS TCA 90 bp | CTTTCATCCACCTCAAGCACCGACTGTTGTAAAACCCTGGACACCTaGAGGTTTCTTGCCATGGCTGAGAGTTCGCTGAGGTCAGCTGAG | + |
|
Preference number: 5 (lower is better) Translates to: LSSTSSTDCCKTLDT*RFLAMAESSLRSAE Trigger: CTCAGCTGACCTCAGCGAACTCTCAGCCATGGCAAGAAACCTTCAGGTGTCCAGGGTTTTACAACAGTCGGTGCTTGAGGTGGATGAAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044231.12 ENSMUST00000121625.2 |
||
| CDS-3UTR CAA 90 bp | AGTGTTAATCAGGGAACAGCCACAGCGAGCAGGCTGGGTACAGAGAACACATCCGAATGGGAGCTGAGATaGAAACTAGTCACCAGCCAC | + |
|
Preference number: 5 (lower is better) Translates to: SVNQGTATASRLGTENTSEWELR*KLVTSH Trigger: GTGGCTGGTGACTAGTTTCAATCTCAGCTCCCATTC...GGATGTGTTCTCTGTACCCAGCCTGCTCGCTGTGGCTGTTCCCTGATTAACACT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044231.12 ENSMUST00000121625.2 |
||
| CDS-3UTR CAA 90 bp | CACAGCGAGCAGGCTGGGTACAGAGAACACATCCTTTCCCACCTACCACCAGCATGGTTCAGCTTGAACTaGGGAAAGAAGACCTCCATT | + |
|
Preference number: 5 (lower is better) Translates to: HSEQAGYREHILSHLPPAWFSLN*GKKTSI Trigger: AATGGAGGTCTTCTTTCCCAAGTTCAAGCTGAACCA...TGCTGGTGGTAGGTGGGAAAGGATGTGTTCTCTGTACCCAGCCTGCTCGCTGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044231.12 ENSMUST00000121625.2 |
||
| CDS TCA 90 bp | CGAAGCAGGTTGAACCCAAAGCTTGAAGTCTCATTGGAGAGCTGCTaGCTGGCCCTCAGCCAATATTCCTCATCCTTGCCTTCCTCCTTT | + |
|
Preference number: 5 (lower is better) Translates to: RSRLNPKLEVSLESC*LALSQYSSSLPSSF Trigger: AAAGGAGGAAGGCAAGGATGAGGAATATTGGCTGAGGGCCAGTCAGCAGCTCTCCAATGAGACTTCAAGCTTTGGGTTCAACCTGCTTCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044231.12 ENSMUST00000121625.2 |
||
| CDS CCA 90 bp | TCTTTGACCTTCTTGAAGAGGGCTGGAAGGATCAGGGGTCCTGCTTaGCTCAGGGCCTGTAGGTTGAGTCCATTTTCTATCTGGACTTTG | + |
|
Preference number: 5 (lower is better) Translates to: SLTFLKRAGRIRGPA*LRACRLSPFSIWTL Trigger: CAAAGTCCAGATAGAAAATGGACTCAACCTACAGGCCCTGAGCCAAGCAGGACCCCTGATCCTTCCAGCCCTCTTCAAGAAGGTCAAAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044231.12 ENSMUST00000121625.2 |
||
| CDS-3UTR CAA 90 bp | AGTTTCAGTGTTAATCAGGGAACAGCCACAGCGAGCAGGCTGGGTACAGAGAACGTCTCTTTGACCTTCTaGAAGAGGGCTGGAAGGATC | + |
|
Preference number: 5 (lower is better) Translates to: SFSVNQGTATASRLGTENVSLTF*KRAGRI Trigger: GATCCTTCCAGCCCTCTTCAAGAAGGTCAAAGAGAC...GTTCTCTGTACCCAGCCTGCTCGCTGTGGCTGTTCCCTGATTAACACTGAAACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044231.12 ENSMUST00000121625.2 |
||
| CDS-3UTR CAA 90 bp | CGAGCAGGCTGGGTACAGAGAACACATCCTTTCCCACCTACCACCAGCATCTTGTTCCCCTCAGTCTCTTaGACAATGCAGTGGTTTATG | + |
|
Preference number: 5 (lower is better) Translates to: RAGWVQRTHPFPPTTSILFPSVS*TMQWFM Trigger: CATAAACCACTGCATTGTCAAAGAGACTGAGGGGAA...CAAGATGCTGGTGGTAGGTGGGAAAGGATGTGTTCTCTGTACCCAGCCTGCTCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044231.12 ENSMUST00000121625.2 |
||
| CDS-3UTR CAA 90 bp | CCCTGCACTCTATACAGTCAAGATCCTCCACAGCATCAAGGCCCACAAAGGTATCTGGAGAAGGTCTCTTaGACCTTCTTGAAGAGGGCT | + |
|
Preference number: 5 (lower is better) Translates to: PCTLYSQDPPQHQGPQRYLEKVS*TFLKRA Trigger: AGCCCTCTTCAAGAAGGTCAAAGAGACCTTCTCCAG...ATACCTTTGTGGGCCTTGATGCTGTGGAGGATCTTGACTGTATAGAGTGCAGGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044231.12 |
||
| CDS-3UTR CAA 90 bp | CAGGCTGGGTACAGAGAACACATCCTTTCCCACCTACCACCAGCATCTTGTGTTTACCTCTGGTTCAGCTaGAACTTGGGAAAGAAGACC | + |
|
Preference number: 5 (lower is better) Translates to: QAGYREHILSHLPPASCVYLWFS*NLGKKT Trigger: GGTCTTCTTTCCCAAGTTCAAGCTGAACCAGAGGTA...AACACAAGATGCTGGTGGTAGGTGGGAAAGGATGTGTTCTCTGTACCCAGCCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044231.12 ENSMUST00000121625.2 |
||
| CDS-3UTR CAA 90 bp | AGAGGAAAAATGTGCCTGTCACTCGTGAAAACCCAGATGTGGCCTTTGCTCTGGCTGATTCCCATCTGTTaGAGCAGCTCGTGCATCTCA | + |
|
Preference number: 5 (lower is better) Translates to: RGKMCLSLVKTQMWPLLWLIPIC*SSSCIS Trigger: TGAGATGCACGAGCTGCTCAAACAGATGGGAATCAG...CCAGAGCAAAGGCCACATCTGGGTTTTCACGAGTGACAGGCACATTTTTCCTCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044231.12 |
||
| CDS-3UTR CAA 90 bp | TTAGTTTCAGTGTTAATCAGGGAACAGCCACAGCGAGCAGGCTGGGTACAGAGACTGATTCCCATCTGTTaGAGCAGCTCGTGCATCTCA | + |
|
Preference number: 5 (lower is better) Translates to: LVSVLIREQPQRAGWVQRLIPIC*SSSCIS Trigger: TGAGATGCACGAGCTGCTCAAACAGATGGGAATCAG...TCTCTGTACCCAGCCTGCTCGCTGTGGCTGTTCCCTGATTAACACTGAAACTAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044231.12 ENSMUST00000121625.2 |
||
| CDS-3UTR CAA 90 bp | TGGGTACAGAGAACACATCCTTTCCCACCTACCACCAGCATCTTGTGTTTCAGAACACCTGAAGGTTTCTaGCCATGGCTGAGAGTTCGC | + |
|
Preference number: 5 (lower is better) Translates to: WVQRTHPFPPTTSILCFRTPEGF*PWLRVR Trigger: GCGAACTCTCAGCCATGGCAAGAAACCTTCAGGTGT...TCTGAAACACAAGATGCTGGTGGTAGGTGGGAAAGGATGTGTTCTCTGTACCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044231.12 ENSMUST00000121625.2 |
||
| CDS TCA 90 bp | TTGATTCTCATAATCCTGAGACTCCAGGTGAACGGAAGCCTCTGGTaGATGGGAGCTGAGATTGAAACTAGTCACCAGCCACACCTCTGT | + |
|
Preference number: 5 (lower is better) Translates to: LILIILRLQVNGSLW*MGAEIETSHQPHLC Trigger: ACAGAGGTGTGGCTGGTGACTAGTTTCAATCTCAGCTCCCATTCACCAGAGGCTTCCGTTCACCTGGAGTCTCAGGATTATGAGAATCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044231.12 ENSMUST00000121625.2 |
||
| CDS-3UTR CAA 90 bp | ACAGAGAACACATCCTTTCCCACCTACCACCAGCATCTTGTGTTTCAGACACCTGTCTCTTTGACCTTCTaGAAGAGGGCTGGAAGGATC | + |
|
Preference number: 5 (lower is better) Translates to: TENTSFPTYHQHLVFQTPVSLTF*KRAGRI Trigger: GATCCTTCCAGCCCTCTTCAAGAAGGTCAAAGAGAC...AGGTGTCTGAAACACAAGATGCTGGTGGTAGGTGGGAAAGGATGTGTTCTCTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044231.12 ENSMUST00000121625.2 |
||
| CDS-3UTR CAA 90 bp | GGGTACAGAGAACACATCCTTTCCCACCTACCACCAGCATCTTGTGTTTCAGACTTAATTGCCCTGTACTaGTCCAGGTGGAAAGTGTCG | + |
|
Preference number: 5 (lower is better) Translates to: GYREHILSHLPPASCVSDLIALY*SRWKVS Trigger: CGACACTTTCCACCTGGACAAGTACAGGGCAATTAA...GTCTGAAACACAAGATGCTGGTGGTAGGTGGGAAAGGATGTGTTCTCTGTACCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044231.12 |
||
| CDS-3UTR CAA 90 bp | TGGGTACAGAGAACACATCCTTTCCCACCTACCACCAGCATCTTGTGTTTCAGACATGGTGGCATTTCCTaGGTAGGGCAGTTTGAGGAT | + |
|
Preference number: 5 (lower is better) Translates to: WVQRTHPFPPTTSILCFRHGGIS*VGQFED Trigger: ATCCTCAAACTGCCCTACCAAGGAAATGCCACCATG...TCTGAAACACAAGATGCTGGTGGTAGGTGGGAAAGGATGTGTTCTCTGTACCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044231.12 |
||
| CDS-3UTR CAA 90 bp | CTGGGTACAGAGAACACATCCTTTCCCACCTACCACCAGCATCTTGTGTTTCAGTACCTCTGGTTCAGCTaGAACTTGGGAAAGAAGACC | + |
|
Preference number: 5 (lower is better) Translates to: LGTENTSFPTYHQHLVFQYLWFS*NLGKKT Trigger: GGTCTTCTTTCCCAAGTTCAAGCTGAACCAGAGGTA...CTGAAACACAAGATGCTGGTGGTAGGTGGGAAAGGATGTGTTCTCTGTACCCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044231.12 ENSMUST00000121625.2 |
||
| CDS CCA 90 bp | CTCCTGATTCCCATCTGTTTGAGCAGCTCGTGCATCTCATACCTCTaGTTCAGCTTGAACTTGGGAAAGAAGACCTCCATTTTCCTGGTT | + |
|
Preference number: 5 (lower is better) Translates to: LLIPICLSSSCISYL*FSLNLGKKTSIFLV Trigger: AACCAGGAAAATGGAGGTCTTCTTTCCCAAGTTCAAGCTGAACCAGAGGTATGAGATGCACGAGCTGCTCAAACAGATGGGAATCAGGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044231.12 ENSMUST00000121625.2 |
||
| CDS-3UTR CAA 90 bp | AAAAATGTGCCTGTCACTCGTGAAAACCCAGATGTGGCCTTTGCTCTGGCCTCTGTACTCTTCCCAGGTTaGATTCTCATAATCCTGAGA | + |
|
Preference number: 5 (lower is better) Translates to: KNVPVTRENPDVAFALASVLFPG*ILIILR Trigger: TCTCAGGATTATGAGAATCAAACCTGGGAAGAGTAC...AGAGGCCAGAGCAAAGGCCACATCTGGGTTTTCACGAGTGACAGGCACATTTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044231.12 |
||
| CDS-3UTR CAA 90 bp | CAGAGAACACATCCTTTCCCACCTACCACCAGCATCTTGTGTTTCAGACACCTCGTACTCTTCCCAGGTTaGATTCTCATAATCCTGAGA | + |
|
Preference number: 5 (lower is better) Translates to: QRTHPFPPTTSILCFRHLVLFPG*ILIILR Trigger: TCTCAGGATTATGAGAATCAAACCTGGGAAGAGTAC...GAGGTGTCTGAAACACAAGATGCTGGTGGTAGGTGGGAAAGGATGTGTTCTCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044231.12 ENSMUST00000121625.2 |
||
| CDS-3UTR CAA 90 bp | TGTTTTAGTTTCAGTGTTAATCAGGGAACAGCCACAGCGAGCAGGCTGGGTACATTCCCCTCAGTCTCTTaGACAATGCAGTGGTTTATG | + |
|
Preference number: 5 (lower is better) Translates to: CFSFSVNQGTATASRLGTFPSVS*TMQWFM Trigger: CATAAACCACTGCATTGTCAAAGAGACTGAGGGGAA...TGTACCCAGCCTGCTCGCTGTGGCTGTTCCCTGATTAACACTGAAACTAAAACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044231.12 ENSMUST00000121625.2 |
||
| CDS-3UTR CAA 90 bp | AAGCACAGTGGGCAACTGAGACAAAGGACAGTTCAGCAGTCCCTAAAGATACATTGGTTCAGCTTGAACTaGGGAAAGAAGACCTCCATT | + |
|
Preference number: 5 (lower is better) Translates to: KHSGQLRQRTVQQSLKIHWFSLN*GKKTSI Trigger: AATGGAGGTCTTCTTTCCCAAGTTCAAGCTGAACCA...ATGTATCTTTAGGGACTGCTGAACTGTCCTTTGTCTCAGTTGCCCACTGTGCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044231.12 |
||
| CDS CCA 72 bp | GCTGGAGAAGGTCTCTTTGACCTTCTTGAAGAGGGCTaGAAGGATCAGGGGTCCTGCTTGGCTCAGGGCCTG | + |
|
Preference number: 6 (lower is better) Translates to: AGEGLFDLLEEG*KDQGSCLAQGL Trigger: CAGGCCCTGAGCCAAGCAGGACCCCTGATCCTTCCAGCCCTCTTCAAGAAGGTCAAAGAGACCTTCTCCAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044231.12 ENSMUST00000121625.2 |
||
| CDS CAA 72 bp | CTGAGGCCCAGGTCCCGGTTGCTGGAGAAGGTCTCTTaGACCTTCTTGAAGAGGGCTGGAAGGATCAGGGGT | + |
|
Preference number: 6 (lower is better) Translates to: LRPRSRLLEKVS*TFLKRAGRIRG Trigger: ACCCCTGATCCTTCCAGCCCTCTTCAAGAAGGTCAAAGAGACCTTCTCCAGCAACCGGGACCTGGGCCTCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044231.12 ENSMUST00000121625.2 |
||
| CDS CAA 90 bp | TTGTGGATGAAGGCAAAGCTACCCTGGCTGAGGCCCAGGTCCCGGTaGCTGGAGAAGGTCTCTTTGACCTTCTTGAAGAGGGCTGGAAGG | + |
|
Preference number: 6 (lower is better) Translates to: LWMKAKLPWLRPRSR*LEKVSLTFLKRAGR Trigger: CCTTCCAGCCCTCTTCAAGAAGGTCAAAGAGACCTTCTCCAGCAACCGGGACCTGGGCCTCAGCCAGGGTAGCTTTGCCTTCATCCACAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044231.12 ENSMUST00000121625.2 |
||
| CDS GCA 72 bp | GCTGCTGACTGGCCCTCAGCCAATATTCCTCATCCTTaGCTTCCTCCTTTTCCTCCTCCTCCTCCTCCTCCT | + |
|
Preference number: 6 (lower is better) Translates to: AADWPSANIPHP*LPPFPPPPPPP Trigger: AGGAGGAGGAGGAGGAGGAGGAAAAGGAGGAAGGCAAGGATGAGGAATATTGGCTGAGGGCCAGTCAGCAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044231.12 ENSMUST00000121625.2 |
||
| CDS CAA 72 bp | AGGTCCCGGTTGCTGGAGAAGGTCTCTTTGACCTTCTaGAAGAGGGCTGGAAGGATCAGGGGTCCTGCTTGG | + |
|
Preference number: 6 (lower is better) Translates to: RSRLLEKVSLTF*KRAGRIRGPAW Trigger: CCAAGCAGGACCCCTGATCCTTCCAGCCCTCTTCAAGAAGGTCAAAGAGACCTTCTCCAGCAACCGGGACCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044231.12 ENSMUST00000121625.2 |
||
| CDS CAA 72 bp | AAGGCAAAGCTACCCTGGCTGAGGCCCAGGTCCCGGTaGCTGGAGAAGGTCTCTTTGACCTTCTTGAAGAGG | + |
|
Preference number: 6 (lower is better) Translates to: KAKLPWLRPRSR*LEKVSLTFLKR Trigger: CCTCTTCAAGAAGGTCAAAGAGACCTTCTCCAGCAACCGGGACCTGGGCCTCAGCCAGGGTAGCTTTGCCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044231.12 ENSMUST00000121625.2 |
||
| CDS TCA 72 bp | CCCTGTACTTGTCCAGGTGGAAAGTGTCGGCCTCAGTaGAGCTGGGGTCAAATGGAGTCAGCCACTTCCCTT | + |
|
Preference number: 6 (lower is better) Translates to: PCTCPGGKCRPQ*SWGQMESATSL Trigger: AAGGGAAGTGGCTGACTCCATTTGACCCCAGCTTCACTGAGGCCGACACTTTCCACCTGGACAAGTACAGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044231.12 |
||
| CDS TCA 72 bp | GGATCAGGGGTCCTGCTTGGCTCAGGGCCTGTAGGTTaGGTCCATTTTCTATCTGGACTTTGGTCTCTCCCT | + |
|
Preference number: 6 (lower is better) Translates to: GSGVLLGSGPVG*VHFLSGLWSLP Trigger: AGGGAGAGACCAAAGTCCAGATAGAAAATGGACTCAACCTACAGGCCCTGAGCCAAGCAGGACCCCTGATCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044231.12 ENSMUST00000121625.2 |
||
| CDS CAA 72 bp | AGGATCAGGGGTCCTGCTTGGCTCAGGGCCTGTAGGTaGAGTCCATTTTCTATCTGGACTTTGGTCTCTCCC | + |
|
Preference number: 6 (lower is better) Translates to: RIRGPAWLRACR*SPFSIWTLVSP Trigger: GGGAGAGACCAAAGTCCAGATAGAAAATGGACTCAACCTACAGGCCCTGAGCCAAGCAGGACCCCTGATCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044231.12 ENSMUST00000121625.2 |
||
| CDS CAA 72 bp | TCCCGGTACATCATGGGCACCTTAATTGCCCTGTACTaGTCCAGGTGGAAAGTGTCGGCCTCAGTGAAGCTG | + |
|
Preference number: 6 (lower is better) Translates to: SRYIMGTLIALY*SRWKVSASVKL Trigger: CAGCTTCACTGAGGCCGACACTTTCCACCTGGACAAGTACAGGGCAATTAAGGTGCCCATGATGTACCGGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044231.12 |
||
| CDS TCA 72 bp | ACCTCAAGCACCGACTGTTGTAAAACCCTGGACACCTaGAGGTTTCTTGCCATGGCTGAGAGTTCGCTGAGG | + |
|
Preference number: 6 (lower is better) Translates to: TSSTDCCKTLDT*RFLAMAESSLR Trigger: CCTCAGCGAACTCTCAGCCATGGCAAGAAACCTTCAGGTGTCCAGGGTTTTACAACAGTCGGTGCTTGAGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044231.12 ENSMUST00000121625.2 |
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| CDS GCA 72 bp | AAAGTTCCCTTCCCGGTACATCATGGGCACCTTAATTaGCCTGTACTTGTCCAGGTGGAAAGTGTCGGCCTC | + |
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Preference number: 6 (lower is better) Translates to: KVPFPVHHGHLN*PVLVQVESVGL Trigger: GAGGCCGACACTTTCCACCTGGACAAGTACAGGGCAATTAAGGTGCCCATGATGTACCGGGAAGGGAACTTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044231.12 |
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| CDS CCA 72 bp | TTCTTGAAGAGGGCTGGAAGGATCAGGGGTCCTGCTTaGCTCAGGGCCTGTAGGTTGAGTCCATTTTCTATC | + |
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Preference number: 6 (lower is better) Translates to: FLKRAGRIRGPA*LRACRLSPFSI Trigger: GATAGAAAATGGACTCAACCTACAGGCCCTGAGCCAAGCAGGACCCCTGATCCTTCCAGCCCTCTTCAAGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044231.12 ENSMUST00000121625.2 |
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| CDS CAA 90 bp | AAGTTCCCTTCCCGGTACATCATGGGCACCTTAATTGCCCTGTACTaGTCCAGGTGGAAAGTGTCGGCCTCAGTGAAGCTGGGGTCAAAT | + |
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Preference number: 6 (lower is better) Translates to: KFPSRYIMGTLIALY*SRWKVSASVKLGSN Trigger: ATTTGACCCCAGCTTCACTGAGGCCGACACTTTCCACCTGGACAAGTACAGGGCAATTAAGGTGCCCATGATGTACCGGGAAGGGAACTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044231.12 |
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| CDS TCA 72 bp | CATGGAGATCTTTCGAAGCAGGTTGAACCCAAAGCTTaGAGTCTCATTGGAGAGCTGCTGACTGGCCCTCAG | + |
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Preference number: 6 (lower is better) Translates to: HGDLSKQVEPKA*SLIGELLTGPQ Trigger: CTGAGGGCCAGTCAGCAGCTCTCCAATGAGACTTCAAGCTTTGGGTTCAACCTGCTTCGAAAGATCTCCATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044231.12 ENSMUST00000121625.2 |
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| CDS TCA 72 bp | CCACTAGCATGGTGGCATTTCCTTGGTAGGGCAGTTTaGGGATGTGACAGCGGAACTTCTTGTCAAAGGTGG | + |
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Preference number: 6 (lower is better) Translates to: PLAWWHFLGRAV*GCDSGTSCQRW Trigger: CCACCTTTGACAAGAAGTTCCGCTGTCACATCCTCAAACTGCCCTACCAAGGAAATGCCACCATGCTAGTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044231.12 |
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| CDS GCA 72 bp | GACAGGCCAAAAGGTGAGAAGATCACATTGCCGTCGTaGCTCATGGAGATCTTTCGAAGCAGGTTGAACCCA | + |
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Preference number: 6 (lower is better) Translates to: DRPKGEKITLPS*LMEIFRSRLNP Trigger: TGGGTTCAACCTGCTTCGAAAGATCTCCATGAGGCACGACGGCAATGTGATCTTCTCACCTTTTGGCCTGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044231.12 ENSMUST00000121625.2 |
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| CDS CCA 72 bp | TGGCTCAGGGCCTGTAGGTTGAGTCCATTTTCTATCTaGACTTTGGTCTCTCCCTTGGTCCCCAGCATCAAA | + |
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Preference number: 6 (lower is better) Translates to: WLRACRLSPFSI*TLVSPLVPSIK Trigger: TTTGATGCTGGGGACCAAGGGAGAGACCAAAGTCCAGATAGAAAATGGACTCAACCTACAGGCCCTGAGCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044231.12 ENSMUST00000121625.2 |
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| CDS CCA 72 bp | ATCATGGGCACCTTAATTGCCCTGTACTTGTCCAGGTaGAAAGTGTCGGCCTCAGTGAAGCTGGGGTCAAAT | + |
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Preference number: 6 (lower is better) Translates to: IMGTLIALYLSR*KVSASVKLGSN Trigger: ATTTGACCCCAGCTTCACTGAGGCCGACACTTTCCACCTGGACAAGTACAGGGCAATTAAGGTGCCCATGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044231.12 |
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| CDS TCA 72 bp | ATAATCCTGAGACTCCAGGTGAACGGAAGCCTCTGGTaGATGGGAGCTGAGATTGAAACTAGTCACCAGCCA | + |
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Preference number: 6 (lower is better) Translates to: IILRLQVNGSLW*MGAEIETSHQP Trigger: TGGCTGGTGACTAGTTTCAATCTCAGCTCCCATTCACCAGAGGCTTCCGTTCACCTGGAGTCTCAGGATTAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044231.12 ENSMUST00000121625.2 |
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| CDS GCA 72 bp | AAGAGCCTCCTGATTCCCATCTGTTTGAGCAGCTCGTaGATCTCATACCTCTGGTTCAGCTTGAACTTGGGA | + |
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Preference number: 6 (lower is better) Translates to: KSLLIPICLSSS*ISYLWFSLNLG Trigger: TCCCAAGTTCAAGCTGAACCAGAGGTATGAGATGCACGAGCTGCTCAAACAGATGGGAATCAGGAGGCTCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044231.12 ENSMUST00000121625.2 |
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| CDS CAA 72 bp | AGGGCCTGTAGGTTGAGTCCATTTTCTATCTGGACTTaGGTCTCTCCCTTGGTCCCCAGCATCAAATTCACC | + |
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Preference number: 6 (lower is better) Translates to: RACRLSPFSIWT*VSPLVPSIKFT Trigger: GGTGAATTTGATGCTGGGGACCAAGGGAGAGACCAAAGTCCAGATAGAAAATGGACTCAACCTACAGGCCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044231.12 ENSMUST00000121625.2 |
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| CDS CCA 72 bp | CCCATCTGTTTGAGCAGCTCGTGCATCTCATACCTCTaGTTCAGCTTGAACTTGGGAAAGAAGACCTCCATT | + |
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Preference number: 6 (lower is better) Translates to: PICLSSSCISYL*FSLNLGKKTSI Trigger: AATGGAGGTCTTCTTTCCCAAGTTCAAGCTGAACCAGAGGTATGAGATGCACGAGCTGCTCAAACAGATGGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044231.12 ENSMUST00000121625.2 |
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| CDS CAA 72 bp | TTGAGTCCATTTTCTATCTGGACTTTGGTCTCTCCCTaGGTCCCCAGCATCAAATTCACCATGGCCACAGAC | + |
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Preference number: 6 (lower is better) Translates to: LSPFSIWTLVSP*VPSIKFTMATD Trigger: GTCTGTGGCCATGGTGAATTTGATGCTGGGGACCAAGGGAGAGACCAAAGTCCAGATAGAAAATGGACTCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044231.12 ENSMUST00000121625.2 |
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| CDS CAA 90 bp | TGTTTGAGCAGCTCGTGCATCTCATACCTCTGGTTCAGCTTGAACTaGGGAAAGAAGACCTCCATTTTCCTGGTTTTCATATTCTGCAGC | + |
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Preference number: 6 (lower is better) Translates to: CLSSSCISYLWFSLN*GKKTSIFLVFIFCS Trigger: GCTGCAGAATATGAAAACCAGGAAAATGGAGGTCTTCTTTCCCAAGTTCAAGCTGAACCAGAGGTATGAGATGCACGAGCTGCTCAAACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044231.12 ENSMUST00000121625.2 |
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| CDS CAA 72 bp | AGCTCGTGCATCTCATACCTCTGGTTCAGCTTGAACTaGGGAAAGAAGACCTCCATTTTCCTGGTTTTCATA | + |
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Preference number: 6 (lower is better) Translates to: SSCISYLWFSLN*GKKTSIFLVFI Trigger: TATGAAAACCAGGAAAATGGAGGTCTTCTTTCCCAAGTTCAAGCTGAACCAGAGGTATGAGATGCACGAGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044231.12 ENSMUST00000121625.2 |
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