Pregenerated sensors for SERINC5 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000021703Ensembl transcript IDs: ENSMUST00000049488.9
Found 152 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CTGCATAAACAGGGAACTGTGAGGGCTCTGGGAGGCAGGCAAAGGTaGGTGACAGGGGCCAAGCCCCACCTTAGGCTGAGGACTCAAGTG | + |
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Preference number: 1 (lower is better) Translates to: LHKQGTVRALGGRQR*VTGAKPHLRLRTQV Trigger: CACTTGAGTCCTCAGCCTAAGGTGGGGCTTGGCCCCTGTCACTCACCTTTGCCTGCCTCCCAGAGCCCTCACAGTTCCCTGTTTATGCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049488.9 |
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| 3UTR GCA 90 bp | TGCCTCTCTCTCAGCACCTCCTTTCTTCAGCACAGCAGGGGCTGCTaGAACGAAGCTGCTGCCTTACACAGGCCCCAGATGATGAGGCTC | + |
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Preference number: 1 (lower is better) Translates to: CLSLSTSFLQHSRGC*NEAAALHRPQMMRL Trigger: GAGCCTCATCATCTGGGGCCTGTGTAAGGCAGCAGCTTCGTTGCAGCAGCCCCTGCTGTGCTGAAGAAAGGAGGTGCTGAGAGAGAGGCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049488.9 |
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| 3UTR GCA 90 bp | CTCTGCCTCTCTCTCAGCACCTCCTTTCTTCAGCACAGCAGGGGCTaGTGCAACGAAGCTGCTGCCTTACACAGGCCCCAGATGATGAGG | + |
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Preference number: 1 (lower is better) Translates to: LCLSLSTSFLQHSRG*CNEAAALHRPQMMR Trigger: CCTCATCATCTGGGGCCTGTGTAAGGCAGCAGCTTCGTTGCAGCAGCCCCTGCTGTGCTGAAGAAAGGAGGTGCTGAGAGAGAGGCAGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049488.9 |
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| 3UTR GCA 90 bp | CACCTCCTTTCTTCAGCACAGCAGGGGCTGCTGCAACGAAGCTGCTaGCTTACACAGGCCCCAGATGATGAGGCTCCCATTCCTACTGGA | + |
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Preference number: 1 (lower is better) Translates to: HLLSSAQQGLLQRSC*LTQAPDDEAPIPTG Trigger: TCCAGTAGGAATGGGAGCCTCATCATCTGGGGCCTGTGTAAGGCAGCAGCTTCGTTGCAGCAGCCCCTGCTGTGCTGAAGAAAGGAGGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049488.9 |
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| 3UTR GCA 90 bp | CAGCACCTCCTTTCTTCAGCACAGCAGGGGCTGCTGCAACGAAGCTaGTGCCTTACACAGGCCCCAGATGATGAGGCTCCCATTCCTACT | + |
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Preference number: 1 (lower is better) Translates to: QHLLSSAQQGLLQRS*CLTQAPDDEAPIPT Trigger: AGTAGGAATGGGAGCCTCATCATCTGGGGCCTGTGTAAGGCAGCAGCTTCGTTGCAGCAGCCCCTGCTGTGCTGAAGAAAGGAGGTGCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049488.9 |
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| 3UTR TCA 90 bp | CAACAAAGGCTAGCCCAGGTATGTGTGGCCTCGTCAGCCTGGCTGTaGCCAGTTCAAAAGTCACCACGCCTGGCTTCCAGTCTCAGCAGA | + |
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Preference number: 1 (lower is better) Translates to: QQRLAQVCVASSAWL*PVQKSPRLASSLSR Trigger: TCTGCTGAGACTGGAAGCCAGGCGTGGTGACTTTTGAACTGGTCACAGCCAGGCTGACGAGGCCACACATACCTGGGCTAGCCTTTGTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049488.9 |
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| 3UTR CCA 90 bp | GGCAGGGCATGTACTCAACCAAGACTTAGGCAGCTAGAAAGTGAATaGGGCTTGGTTCAGAGGGAAGCCACCGGGGCAGCCACTGGTACT | + |
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Preference number: 1 (lower is better) Translates to: GRACTQPRLRQLESE*GLVQREATGAATGT Trigger: AGTACCAGTGGCTGCCCCGGTGGCTTCCCTCTGAACCAAGCCCCATTCACTTTCTAGCTGCCTAAGTCTTGGTTGAGTACATGCCCTGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049488.9 |
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| 3UTR TCA 90 bp | TCCGAGGAGGAAGCCCAGGGTCCTCCCTGGTGCCCATCTTCCTTATaGAGCCCTTTCACTTCTTGGCAGTATGTGGGATGTGCACTGGTT | + |
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Preference number: 1 (lower is better) Translates to: SEEEAQGPPWCPSSL*SPFTSWQYVGCALV Trigger: AACCAGTGCACATCCCACATACTGCCAAGAAGTGAAAGGGCTTCATAAGGAAGATGGGCACCAGGGAGGACCCTGGGCTTCCTCCTCGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049488.9 |
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| 3UTR CCA 90 bp | AGCTTGTCTGGCCGATCTGTGTGGCCAGCTCTGTTGGAAGCTGCTTaGGAACCTTACCCCAGCCCTCCTCTACTTCAAGGAAACCATGCT | + |
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Preference number: 1 (lower is better) Translates to: SLSGRSVWPALLEAA*EPYPSPPLLQGNHA Trigger: AGCATGGTTTCCTTGAAGTAGAGGAGGGCTGGGGTAAGGTTCCCAAGCAGCTTCCAACAGAGCTGGCCACACAGATCGGCCAGACAAGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049488.9 |
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| 3UTR CCA 90 bp | TGGCCTCGTCAGCCTGGCTGTGACCAGTTCAAAAGTCACCACGCCTaGCTTCCAGTCTCAGCAGAGACAAACCTTGGCAAAACAATCCTG | + |
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Preference number: 1 (lower is better) Translates to: WPRQPGCDQFKSHHA*LPVSAETNLGKTIL Trigger: CAGGATTGTTTTGCCAAGGTTTGTCTCTGCTGAGACTGGAAGCCAGGCGTGGTGACTTTTGAACTGGTCACAGCCAGGCTGACGAGGCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049488.9 |
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| 3UTR CCA 90 bp | TTTGGGAAGGGGGCAATTAACACTGGCGTGAAGTCACCGTGGAACTaGAGACATGGCACTATGTCTCCCACTGGCCACTCCCTATGGGAT | + |
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Preference number: 1 (lower is better) Translates to: FGKGAINTGVKSPWN*RHGTMSPTGHSLWD Trigger: ATCCCATAGGGAGTGGCCAGTGGGAGACATAGTGCCATGTCTCCAGTTCCACGGTGACTTCACGCCAGTGTTAATTGCCCCCTTCCCAAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049488.9 |
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| 3UTR CCA 90 bp | CGTGAAGTCACCGTGGAACTGGAGACATGGCACTATGTCTCCCACTaGCCACTCCCTATGGGATTCGGAACCAGAAGTCTCAATACTCCA | + |
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Preference number: 1 (lower is better) Translates to: REVTVELETWHYVSH*PLPMGFGTRSLNTP Trigger: TGGAGTATTGAGACTTCTGGTTCCGAATCCCATAGGGAGTGGCCAGTGGGAGACATAGTGCCATGTCTCCAGTTCCACGGTGACTTCACG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049488.9 |
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| 3UTR GCA 90 bp | AAGACCCTTAAAGCATTACTGTTAATGACACTCACAAGTAAGAACTaGAACCCTCCACTACTTGGGCAAAGACAACAACATGCATCTTGT | + |
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Preference number: 1 (lower is better) Translates to: KTLKALLLMTLTSKN*NPPLLGQRQQHASC Trigger: ACAAGATGCATGTTGTTGTCTTTGCCCAAGTAGTGGAGGGTTGCAGTTCTTACTTGTGAGTGTCATTAACAGTAATGCTTTAAGGGTCTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049488.9 |
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| 3UTR GCA 90 bp | TCCCTCACTATGAACATTGGCACTAAAATGCACACTTGTGAGCACTaGTTTCCAAAAGCATATCTAGGAATTTGTATGGATGTAATCGTA | + |
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Preference number: 1 (lower is better) Translates to: SLTMNIGTKMHTCEH*FPKAYLGICMDVIV Trigger: TACGATTACATCCATACAAATTCCTAGATATGCTTTTGGAAAGCAGTGCTCACAAGTGTGCATTTTAGTGCCAATGTTCATAGTGAGGGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049488.9 |
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| 3UTR-3UTR TCA 90 bp | GGCACTATGTCTCCCACTGGCCACTCCCTATGGGATTCGGAACCAGAAGTCTCAGGAGGCAGGCAAAGGTaGGTGACAGGGGCCAAGCCC | + |
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Preference number: 2 (lower is better) Translates to: GTMSPTGHSLWDSEPEVSGGRQR*VTGAKP Trigger: GGGCTTGGCCCCTGTCACTCACCTTTGCCTGCCTCC...TGAGACTTCTGGTTCCGAATCCCATAGGGAGTGGCCAGTGGGAGACATAGTGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049488.9 |
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| 3UTR-3UTR CCA 90 bp | TCATGTCCGAGGAGGAAGCCCAGGGTCCTCCCTGGTGCCCATCTTCCTTATGAACCTCCAGGGCTGCCATaGCTAAGGTCAGATGGGCAG | + |
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Preference number: 2 (lower is better) Translates to: SCPRRKPRVLPGAHLPYEPPGLP*LRSDGQ Trigger: CTGCCCATCTGACCTTAGCCATGGCAGCCCTGGAGG...TTCATAAGGAAGATGGGCACCAGGGAGGACCCTGGGCTTCCTCCTCGGACATGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049488.9 |
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| 3UTR-3UTR GCA 90 bp | TCATGTCCGAGGAGGAAGCCCAGGGTCCTCCCTGGTGCCCATCTTCCTTATGAACACAGCAGGGGCTGCTaGAACGAAGCTGCTGCCTTA | + |
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Preference number: 2 (lower is better) Translates to: SCPRRKPRVLPGAHLPYEHSRGC*NEAAAL Trigger: TAAGGCAGCAGCTTCGTTGCAGCAGCCCCTGCTGTG...TTCATAAGGAAGATGGGCACCAGGGAGGACCCTGGGCTTCCTCCTCGGACATGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049488.9 |
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| 3UTR CAA 90 bp | GCATGTACTCAACCAAGACTTAGGCAGCTAGAAAGTGAATGGGGCTaGGTTCAGAGGGAAGCCACCGGGGCAGCCACTGGTACTGTCTGG | + |
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Preference number: 2 (lower is better) Translates to: ACTQPRLRQLESEWG*VQREATGAATGTVW Trigger: CCAGACAGTACCAGTGGCTGCCCCGGTGGCTTCCCTCTGAACCAAGCCCCATTCACTTTCTAGCTGCCTAAGTCTTGGTTGAGTACATGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049488.9 |
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| 3UTR-3UTR TCA 90 bp | TTTCTAAACTCTGCCTCCAGGGCTGCCATGGCTAAGGTCAGATGGGCAGCTTCAATAAACAGGGAACTGTaGGGGCTCTGGGAGGCAGGC | + |
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Preference number: 2 (lower is better) Translates to: FLNSASRAAMAKVRWAASINREL*GLWEAG Trigger: GCCTGCCTCCCAGAGCCCTCACAGTTCCCTGTTTAT...TGAAGCTGCCCATCTGACCTTAGCCATGGCAGCCCTGGAGGCAGAGTTTAGAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049488.9 |
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| 3UTR-3UTR CCA 90 bp | TCATGTCCGAGGAGGAAGCCCAGGGTCCTCCCTGGTGCCCATCTTCCTTATGAACACTATGTCTCCCACTaGCCACTCCCTATGGGATTC | + |
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Preference number: 2 (lower is better) Translates to: SCPRRKPRVLPGAHLPYEHYVSH*PLPMGF Trigger: GAATCCCATAGGGAGTGGCCAGTGGGAGACATAGTG...TTCATAAGGAAGATGGGCACCAGGGAGGACCCTGGGCTTCCTCCTCGGACATGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049488.9 |
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| 3UTR-3UTR CCA 90 bp | GGCACTATGTCTCCCACTGGCCACTCCCTATGGGATTCGGAACCAGAAGTCTCACCCCAAGCTCTGGCCTaGTTAAAACACGTCCAGGAA | + |
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Preference number: 2 (lower is better) Translates to: GTMSPTGHSLWDSEPEVSPQALA*LKHVQE Trigger: TTCCTGGACGTGTTTTAACCAGGCCAGAGCTTGGGG...TGAGACTTCTGGTTCCGAATCCCATAGGGAGTGGCCAGTGGGAGACATAGTGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049488.9 |
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| 3UTR-3UTR TCA 90 bp | GGCACTATGTCTCCCACTGGCCACTCCCTATGGGATTCGGAACCAGAAGTCTCATACCTTAGACAAGAATaGAGGACCTCTGCCAAGGGC | + |
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Preference number: 2 (lower is better) Translates to: GTMSPTGHSLWDSEPEVSYLRQE*RTSAKG Trigger: GCCCTTGGCAGAGGTCCTTCATTCTTGTCTAAGGTA...TGAGACTTCTGGTTCCGAATCCCATAGGGAGTGGCCAGTGGGAGACATAGTGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049488.9 |
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| 3UTR-3UTR CCA 90 bp | GGCACTATGTCTCCCACTGGCCACTCCCTATGGGATTCGGAACCAGAAGTCTCACAGCTAGAAAGTGAATaGGGCTTGGTTCAGAGGGAA | + |
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Preference number: 2 (lower is better) Translates to: GTMSPTGHSLWDSEPEVSQLESE*GLVQRE Trigger: TTCCCTCTGAACCAAGCCCCATTCACTTTCTAGCTG...TGAGACTTCTGGTTCCGAATCCCATAGGGAGTGGCCAGTGGGAGACATAGTGCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049488.9 |
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| 3UTR-3UTR TCA 90 bp | AGTTCAAAAGTCACCACGCCTGGCTTCCAGTCTCAGCAGAGACAAACCTTGGCAATGTGCAGAAGTAGTTaGGGGTGGAGTCAAAGGAGG | + |
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Preference number: 2 (lower is better) Translates to: SSKVTTPGFQSQQRQTLAMCRSS*GWSQRR Trigger: CCTCCTTTGACTCCACCCTCAACTACTTCTGCACAT...TGCCAAGGTTTGTCTCTGCTGAGACTGGAAGCCAGGCGTGGTGACTTTTGAACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049488.9 |
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| 3UTR-3UTR TCA 90 bp | GGCACTATGTCTCCCACTGGCCACTCCCTATGGGATTCGGAACCAGAAGTCTCAGGTCCCAATTCTGTCTaGTTTGTTCAGATAGGCACT | + |
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Preference number: 2 (lower is better) Translates to: GTMSPTGHSLWDSEPEVSGPNSV*FVQIGT Trigger: AGTGCCTATCTGAACAAATCAGACAGAATTGGGACC...TGAGACTTCTGGTTCCGAATCCCATAGGGAGTGGCCAGTGGGAGACATAGTGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049488.9 |
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| 3UTR-3UTR GCA 90 bp | GCACTATGTCTCCCACTGGCCACTCCCTATGGGATTCGGAACCAGAAGTCTCAACGTAGTCTTGTGAGATaGCTCCAACCACCGACTTTT | + |
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Preference number: 2 (lower is better) Translates to: ALCLPLATPYGIRNQKSQRSLVR*LQPPTF Trigger: AAAAGTCGGTGGTTGGAGGCATCTCACAAGACTACG...TTGAGACTTCTGGTTCCGAATCCCATAGGGAGTGGCCAGTGGGAGACATAGTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049488.9 |
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| 3UTR-3UTR CCA 90 bp | CTTGGCAGTATGTGGGATGTGCACTGGTTTATGTTTCCGCACACGAAAAAGAGCTCTGGCCGATCTGTGTaGCCAGCTCTGTTGGAAGCT | + |
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Preference number: 2 (lower is better) Translates to: LGSMWDVHWFMFPHTKKSSGRSV*PALLEA Trigger: AGCTTCCAACAGAGCTGGCCACACAGATCGGCCAGA...GCTCTTTTTCGTGTGCGGAAACATAAACCAGTGCACATCCCACATACTGCCAAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049488.9 |
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| 3UTR-3UTR TCA 90 bp | CTTGGCAGTATGTGGGATGTGCACTGGTTTATGTTTCCGCACACGAAAAAGAGCACATTTTCATCCCTGTaGCAGACGCTGTGCCCCAAG | + |
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Preference number: 2 (lower is better) Translates to: LGSMWDVHWFMFPHTKKSTFSSL*QTLCPK Trigger: CTTGGGGCACAGCGTCTGTCACAGGGATGAAAATGT...GCTCTTTTTCGTGTGCGGAAACATAAACCAGTGCACATCCCACATACTGCCAAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000049488.9 |
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| 3UTR-3UTR TCA 90 bp | TTTCTAAACTCTGCCTCCAGGGCTGCCATGGCTAAGGTCAGATGGGCAGCTTCATCCTCTCCCTCACTATaGACATTGGCACTAAAATGC | + |
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Preference number: 2 (lower is better) Translates to: FLNSASRAAMAKVRWAASSSPSL*TLALKC Trigger: GCATTTTAGTGCCAATGTTCATAGTGAGGGAGAGGA...TGAAGCTGCCCATCTGACCTTAGCCATGGCAGCCCTGGAGGCAGAGTTTAGAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049488.9 |
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| 3UTR-3UTR CCA 90 bp | CTTGGCAGTATGTGGGATGTGCACTGGTTTATGTTTCCGCACACGAAAAAGAGCGTGGAACTGGAGACATaGCACTATGTCTCCCACTGG | + |
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Preference number: 2 (lower is better) Translates to: LGSMWDVHWFMFPHTKKSVELET*HYVSHW Trigger: CCAGTGGGAGACATAGTGCCATGTCTCCAGTTCCAC...GCTCTTTTTCGTGTGCGGAAACATAAACCAGTGCACATCCCACATACTGCCAAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049488.9 |
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| 3UTR-3UTR TCA 90 bp | CTTGGCAGTATGTGGGATGTGCACTGGTTTATGTTTCCGCACACGAAAAAGAGCAGCCCCACCTTAGGCTaGGGACTCAAGTGTTTTTGT | + |
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Preference number: 2 (lower is better) Translates to: LGSMWDVHWFMFPHTKKSSPTLG*GLKCFC Trigger: ACAAAAACACTTGAGTCCTCAGCCTAAGGTGGGGCT...GCTCTTTTTCGTGTGCGGAAACATAAACCAGTGCACATCCCACATACTGCCAAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000049488.9 |
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| 3UTR-3UTR CCA 90 bp | GACAGCTCATCTCTGCAGGGAATAAAATGTTTACTAGTCTCAGTCACAGAAGAACACCGGGGCAGCCACTaGTACTGTCTGGGTTTCCCT | + |
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Preference number: 2 (lower is better) Translates to: DSSSLQGIKCLLVSVTEEHRGSH*YCLGFP Trigger: AGGGAAACCCAGACAGTACCAGTGGCTGCCCCGGTG...TTCTTCTGTGACTGAGACTAGTAAACATTTTATTCCCTGCAGAGATGAGCTGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049488.9 |
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| 3UTR-3UTR CCA 90 bp | TTTCTAAACTCTGCCTCCAGGGCTGCCATGGCTAAGGTCAGATGGGCAGCTTCAAAGATTCTGACATTTTaGCTTGTGGGAATCAGGCTT | + |
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Preference number: 2 (lower is better) Translates to: FLNSASRAAMAKVRWAASKILTF*LVGIRL Trigger: AAGCCTGATTCCCACAAGCCAAAATGTCAGAATCTT...TGAAGCTGCCCATCTGACCTTAGCCATGGCAGCCCTGGAGGCAGAGTTTAGAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049488.9 |
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| 3UTR-3UTR CCA 90 bp | TATGTTTCCGCACACGAAAAAGAGCCACTGGTTAGAAAGGCATTGAAGCAGAGAGCCACTGGTACTGTCTaGGTTTCCCTGAGCTGCTTT | + |
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Preference number: 2 (lower is better) Translates to: YVSAHEKEPLVRKALKQRATGTV*VSLSCF Trigger: AAAGCAGCTCAGGGAAACCCAGACAGTACCAGTGGC...TCTCTGCTTCAATGCCTTTCTAACCAGTGGCTCTTTTTCGTGTGCGGAAACATA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049488.9 |
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| 3UTR-3UTR GCA 90 bp | AGTTCAAAAGTCACCACGCCTGGCTTCCAGTCTCAGCAGAGACAAACCTTGGCACACACTTGTGAGCACTaGTTTCCAAAAGCATATCTA | + |
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Preference number: 2 (lower is better) Translates to: SSKVTTPGFQSQQRQTLAHTCEH*FPKAYL Trigger: TAGATATGCTTTTGGAAAGCAGTGCTCACAAGTGTG...TGCCAAGGTTTGTCTCTGCTGAGACTGGAAGCCAGGCGTGGTGACTTTTGAACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049488.9 |
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| 3UTR-3UTR GCA 90 bp | GCACTATGTCTCCCACTGGCCACTCCCTATGGGATTCGGAACCAGAAGTCTCAAAAGTGTTTTTGTTGTTaGTTCTTTATGCCAAGGATG | + |
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Preference number: 2 (lower is better) Translates to: ALCLPLATPYGIRNQKSQKCFCC*FFMPRM Trigger: CATCCTTGGCATAAAGAAGCAACAACAAAAACACTT...TTGAGACTTCTGGTTCCGAATCCCATAGGGAGTGGCCAGTGGGAGACATAGTGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049488.9 |
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| 3UTR-3UTR GCA 90 bp | TATGTTTCCGCACACGAAAAAGAGCCACTGGTTAGAAAGGCATTGAAGCAGAGACTCACAAGTAAGAACTaGAACCCTCCACTACTTGGG | + |
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Preference number: 2 (lower is better) Translates to: YVSAHEKEPLVRKALKQRLTSKN*NPPLLG Trigger: CCCAAGTAGTGGAGGGTTGCAGTTCTTACTTGTGAG...TCTCTGCTTCAATGCCTTTCTAACCAGTGGCTCTTTTTCGTGTGCGGAAACATA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049488.9 |
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| 3UTR-3UTR CCA 90 bp | GCACTATGTCTCCCACTGGCCACTCCCTATGGGATTCGGAACCAGAAGTCTCAAACTTCAGCTAATTCTTaGGTAAGGCATAAAGAGATA | + |
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Preference number: 2 (lower is better) Translates to: ALCLPLATPYGIRNQKSQTSANS*VRHKEI Trigger: TATCTCTTTATGCCTTACCCAAGAATTAGCTGAAGT...TTGAGACTTCTGGTTCCGAATCCCATAGGGAGTGGCCAGTGGGAGACATAGTGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049488.9 |
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| 3UTR-3UTR TCA 90 bp | CTTGGCAGTATGTGGGATGTGCACTGGTTTATGTTTCCGCACACGAAAAAGAGCGTAGTTTCTCACAGCTaGTCACAAATGCCAACTTTT | + |
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Preference number: 2 (lower is better) Translates to: LGSMWDVHWFMFPHTKKSVVSHS*SQMPTF Trigger: AAAAGTTGGCATTTGTGATCAGCTGTGAGAAACTAC...GCTCTTTTTCGTGTGCGGAAACATAAACCAGTGCACATCCCACATACTGCCAAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049488.9 |
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| 3UTR-3UTR GCA 90 bp | GACAGCTCATCTCTGCAGGGAATAAAATGTTTACTAGTCTCAGTCACAGAAGAAAGAATGAAGGACCTCTaGCAAGGGCAGAGAGGACAA | + |
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Preference number: 2 (lower is better) Translates to: DSSSLQGIKCLLVSVTEERMKDL*QGQRGQ Trigger: TTGTCCTCTCTGCCCTTGGCAGAGGTCCTTCATTCT...TTCTTCTGTGACTGAGACTAGTAAACATTTTATTCCCTGCAGAGATGAGCTGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049488.9 |
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| 3UTR-3UTR CCA 90 bp | GACAGCTCATCTCTGCAGGGAATAAAATGTTTACTAGTCTCAGTCACAGAAGAACTCAACAGAAAATGCTaGGGCAGGGATGTGCAGAAG | + |
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Preference number: 2 (lower is better) Translates to: DSSSLQGIKCLLVSVTEELNRKC*GRDVQK Trigger: CTTCTGCACATCCCTGCCCCAGCATTTTCTGTTGAG...TTCTTCTGTGACTGAGACTAGTAAACATTTTATTCCCTGCAGAGATGAGCTGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049488.9 |
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| 3UTR-3UTR TCA 90 bp | GACAGCTCATCTCTGCAGGGAATAAAATGTTTACTAGTCTCAGTCACAGAAGAAGAGGGAGAGAACACATaGTTTCTAAACTCTGCCTCC | + |
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Preference number: 2 (lower is better) Translates to: DSSSLQGIKCLLVSVTEEEGENT*FLNSAS Trigger: GGAGGCAGAGTTTAGAAATCATGTGTTCTCTCCCTC...TTCTTCTGTGACTGAGACTAGTAAACATTTTATTCCCTGCAGAGATGAGCTGTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049488.9 |
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| 3UTR-3UTR GCA 90 bp | TTTAAAAGCAAGGTAACATTGCTGTTGTTATCTCAAAACAATGGCACACTTTCCAGCAGAGTTCCTCTCTaGCTCTCTCTCAGCACCTCC | + |
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Preference number: 2 (lower is better) Translates to: FKSKVTLLLLSQNNGTLSSRVPL*LSLSTS Trigger: GGAGGTGCTGAGAGAGAGGCAGAGAGGAACTCTGCT...GGAAAGTGTGCCATTGTTTTGAGATAACAACAGCAATGTTACCTTGCTTTTAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049488.9 |
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| 3UTR-3UTR GCA 90 bp | GTCAATTGGGCAAATGCATTCCAGTTCTGCCCTTGCCCAACTAAAACAAAATCAACATTGGCACTAAAATaGACACTTGTGAGCACTGCT | + |
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Preference number: 2 (lower is better) Translates to: VNWANAFQFCPCPTKTKSTLALK*TLVSTA Trigger: AGCAGTGCTCACAAGTGTGCATTTTAGTGCCAATGT...TGATTTTGTTTTAGTTGGGCAAGGGCAGAACTGGAATGCATTTGCCCAATTGAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000049488.9 |
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| 3UTR-3UTR CCA 90 bp | GACAGCTCATCTCTGCAGGGAATAAAATGTTTACTAGTCTCAGTCACAGAAGAATTGCACCTACCAGCTTaGCTAAAGATTTCAATTCCT | + |
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Preference number: 2 (lower is better) Translates to: DSSSLQGIKCLLVSVTEELHLPA*LKISIP Trigger: AGGAATTGAAATCTTTAGCCAAGCTGGTAGGTGCAA...TTCTTCTGTGACTGAGACTAGTAAACATTTTATTCCCTGCAGAGATGAGCTGTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049488.9 |
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| 3UTR-3UTR CCA 90 bp | TTTAAAAGCAAGGTAACATTGCTGTTGTTATCTCAAAACAATGGCACACTTTCCCAACCCTCCACTACTTaGGCAAAGACAACAACATGC | + |
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Preference number: 2 (lower is better) Translates to: FKSKVTLLLLSQNNGTLSQPSTT*AKTTTC Trigger: GCATGTTGTTGTCTTTGCCCAAGTAGTGGAGGGTTG...GGAAAGTGTGCCATTGTTTTGAGATAACAACAGCAATGTTACCTTGCTTTTAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049488.9 |
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| 3UTR-3UTR CCA 90 bp | GACAGCTCATCTCTGCAGGGAATAAAATGTTTACTAGTCTCAGTCACAGAAGAACTGGTAGTTTCCTTTTaGATTTTACAACTAGAAGCT | + |
|
Preference number: 2 (lower is better) Translates to: DSSSLQGIKCLLVSVTEELVVSF*ILQLEA Trigger: AGCTTCTAGTTGTAAAATCCAAAAGGAAACTACCAG...TTCTTCTGTGACTGAGACTAGTAAACATTTTATTCCCTGCAGAGATGAGCTGTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000049488.9 |
||
| 3UTR GCA 72 bp | CTTTCTTCAGCACAGCAGGGGCTGCTGCAACGAAGCTaGTGCCTTACACAGGCCCCAGATGATGAGGCTCCC | + |
|
Preference number: 3 (lower is better) Translates to: LSSAQQGLLQRS*CLTQAPDDEAP Trigger: GGGAGCCTCATCATCTGGGGCCTGTGTAAGGCAGCAGCTTCGTTGCAGCAGCCCCTGCTGTGCTGAAGAAAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049488.9 |
||
| 3UTR GCA 72 bp | TCTCTCAGCACCTCCTTTCTTCAGCACAGCAGGGGCTaGTGCAACGAAGCTGCTGCCTTACACAGGCCCCAG | + |
|
Preference number: 3 (lower is better) Translates to: SLSTSFLQHSRG*CNEAAALHRPQ Trigger: CTGGGGCCTGTGTAAGGCAGCAGCTTCGTTGCAGCAGCCCCTGCTGTGCTGAAGAAAGGAGGTGCTGAGAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049488.9 |
||
| 3UTR CCA 72 bp | ACAGCTTGTCTGGCCGATCTGTGTGGCCAGCTCTGTTaGAAGCTGCTTGGGAACCTTACCCCAGCCCTCCTC | + |
|
Preference number: 3 (lower is better) Translates to: TACLADLCGQLC*KLLGNLTPALL Trigger: GAGGAGGGCTGGGGTAAGGTTCCCAAGCAGCTTCCAACAGAGCTGGCCACACAGATCGGCCAGACAAGCTGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049488.9 |
||
| 3UTR CCA 72 bp | GGGCTTGGTTCAGAGGGAAGCCACCGGGGCAGCCACTaGTACTGTCTGGGTTTCCCTGAGCTGCTTTCCATA | + |
|
Preference number: 3 (lower is better) Translates to: GLGSEGSHRGSH*YCLGFPELLSI Trigger: TATGGAAAGCAGCTCAGGGAAACCCAGACAGTACCAGTGGCTGCCCCGGTGGCTTCCCTCTGAACCAAGCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049488.9 |
||
| 3UTR GCA 72 bp | TCTTCAGCACAGCAGGGGCTGCTGCAACGAAGCTGCTaGCTTACACAGGCCCCAGATGATGAGGCTCCCATT | + |
|
Preference number: 3 (lower is better) Translates to: SSAQQGLLQRSC*LTQAPDDEAPI Trigger: AATGGGAGCCTCATCATCTGGGGCCTGTGTAAGGCAGCAGCTTCGTTGCAGCAGCCCCTGCTGTGCTGAAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049488.9 |
||
| 3UTR CCA 72 bp | GGCCGATCTGTGTGGCCAGCTCTGTTGGAAGCTGCTTaGGAACCTTACCCCAGCCCTCCTCTACTTCAAGGA | + |
|
Preference number: 3 (lower is better) Translates to: GRSVWPALLEAA*EPYPSPPLLQG Trigger: TCCTTGAAGTAGAGGAGGGCTGGGGTAAGGTTCCCAAGCAGCTTCCAACAGAGCTGGCCACACAGATCGGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049488.9 |
||
| 3UTR GCA 72 bp | TTTTCACAGGGCACCAGTTGCTGCTTAAACCCCTGGTaGACACGTTCAAAGGGCAGCCCTCCACAGTGGGCA | + |
|
Preference number: 3 (lower is better) Translates to: FSQGTSCCLNPW*TRSKGSPPQWA Trigger: TGCCCACTGTGGAGGGCTGCCCTTTGAACGTGTGCACCAGGGGTTTAAGCAGCAACTGGTGCCCTGTGAAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049488.9 |
||
| 3UTR CCA 72 bp | AGCTTTTCACAGGGCACCAGTTGCTGCTTAAACCCCTaGTGCACACGTTCAAAGGGCAGCCCTCCACAGTGG | + |
|
Preference number: 3 (lower is better) Translates to: SFSQGTSCCLNP*CTRSKGSPPQW Trigger: CCACTGTGGAGGGCTGCCCTTTGAACGTGTGCACCAGGGGTTTAAGCAGCAACTGGTGCCCTGTGAAAAGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049488.9 |
||
| 3UTR CCA 72 bp | GGGGCAATTAACACTGGCGTGAAGTCACCGTGGAACTaGAGACATGGCACTATGTCTCCCACTGGCCACTCC | + |
|
Preference number: 3 (lower is better) Translates to: GAINTGVKSPWN*RHGTMSPTGHS Trigger: GGAGTGGCCAGTGGGAGACATAGTGCCATGTCTCCAGTTCCACGGTGACTTCACGCCAGTGTTAATTGCCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049488.9 |
||
| 3UTR TCA 72 bp | GAAGCCCAGGGTCCTCCCTGGTGCCCATCTTCCTTATaGAGCCCTTTCACTTCTTGGCAGTATGTGGGATGT | + |
|
Preference number: 3 (lower is better) Translates to: EAQGPPWCPSSL*SPFTSWQYVGC Trigger: ACATCCCACATACTGCCAAGAAGTGAAAGGGCTTCATAAGGAAGATGGGCACCAGGGAGGACCCTGGGCTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049488.9 |
||
| 3UTR CCA 72 bp | CAGCCTGGCTGTGACCAGTTCAAAAGTCACCACGCCTaGCTTCCAGTCTCAGCAGAGACAAACCTTGGCAAA | + |
|
Preference number: 3 (lower is better) Translates to: QPGCDQFKSHHA*LPVSAETNLGK Trigger: TTTGCCAAGGTTTGTCTCTGCTGAGACTGGAAGCCAGGCGTGGTGACTTTTGAACTGGTCACAGCCAGGCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049488.9 |
||
| 3UTR TCA 72 bp | ACTAGTCTCAGTCACAGAAGAAACCTTCAGAGCATATaGCCAGGTGGCAAGCTCATGTCCGAGGAGGAAGCC | + |
|
Preference number: 3 (lower is better) Translates to: TSLSHRRNLQSI*PGGKLMSEEEA Trigger: GGCTTCCTCCTCGGACATGAGCTTGCCACCTGGTCATATGCTCTGAAGGTTTCTTCTGTGACTGAGACTAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049488.9 |
||
| 3UTR CCA 72 bp | AGACATGGCACTATGTCTCCCACTGGCCACTCCCTATaGGATTCGGAACCAGAAGTCTCAATACTCCATGTC | + |
|
Preference number: 3 (lower is better) Translates to: RHGTMSPTGHSL*DSEPEVSILHV Trigger: GACATGGAGTATTGAGACTTCTGGTTCCGAATCCCATAGGGAGTGGCCAGTGGGAGACATAGTGCCATGTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049488.9 |
||
| 3UTR CCA 72 bp | GCCCTTTCACTTCTTGGCAGTATGTGGGATGTGCACTaGTTTATGTTTCCGCACACGAAAAAGAGCCACTGG | + |
|
Preference number: 3 (lower is better) Translates to: ALSLLGSMWDVH*FMFPHTKKSHW Trigger: CCAGTGGCTCTTTTTCGTGTGCGGAAACATAAACCAGTGCACATCCCACATACTGCCAAGAAGTGAAAGGGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049488.9 |
||
| 3UTR-3UTR CAA 90 bp | TTTCTAAACTCTGCCTCCAGGGCTGCCATGGCTAAGGTCAGATGGGCAGCTTCAATTGCACCTACCAGCTaGGCTAAAGATTTCAATTCC | + |
|
Preference number: 3 (lower is better) Translates to: FLNSASRAAMAKVRWAASIAPTS*AKDFNS Trigger: GGAATTGAAATCTTTAGCCAAGCTGGTAGGTGCAAT...TGAAGCTGCCCATCTGACCTTAGCCATGGCAGCCCTGGAGGCAGAGTTTAGAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049488.9 |
||
| 3UTR-3UTR CAA 90 bp | TCATGTCCGAGGAGGAAGCCCAGGGTCCTCCCTGGTGCCCATCTTCCTTATGAACAAGTGTTTTTGTTGTaGCTTCTTTATGCCAAGGAT | + |
|
Preference number: 3 (lower is better) Translates to: SCPRRKPRVLPGAHLPYEQVFLL*LLYAKD Trigger: ATCCTTGGCATAAAGAAGCAACAACAAAAACACTTG...TTCATAAGGAAGATGGGCACCAGGGAGGACCCTGGGCTTCCTCCTCGGACATGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049488.9 |
||
| 3UTR-3UTR CAA 90 bp | TCATGTCCGAGGAGGAAGCCCAGGGTCCTCCCTGGTGCCCATCTTCCTTATGAAACTCAAGTGTTTTTGTaGTTGCTTCTTTATGCCAAG | + |
|
Preference number: 3 (lower is better) Translates to: SCPRRKPRVLPGAHLPYETQVFL*LLLYAK Trigger: CTTGGCATAAAGAAGCAACAACAAAAACACTTGAGT...TTCATAAGGAAGATGGGCACCAGGGAGGACCCTGGGCTTCCTCCTCGGACATGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049488.9 |
||
| 3UTR TCA 72 bp | AAACTTCCCCAAACCCCTGCAGAACAATTCATCTGCTaGCTTCCCAAGAAACCCAGATCAGCTATCCAGCAC | + |
|
Preference number: 3 (lower is better) Translates to: KLPQTPAEQFIC*LPKKPRSAIQH Trigger: GTGCTGGATAGCTGATCTGGGTTTCTTGGGAAGTCAGCAGATGAATTGTTCTGCAGGGGTTTGGGGAAGTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049488.9 |
||
| 3UTR CCA 72 bp | GGGTCCCAATTCTGTCTGATTTGTTCAGATAGGCACTaGGGAAATCCTCTCCCTCACTATGAACATTGGCAC | + |
|
Preference number: 3 (lower is better) Translates to: GSQFCLICSDRH*GNPLPHYEHWH Trigger: GTGCCAATGTTCATAGTGAGGGAGAGGATTTCCCCAGTGCCTATCTGAACAAATCAGACAGAATTGGGACCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049488.9 |
||
| 3UTR-3UTR CAA 90 bp | GCACTATGTCTCCCACTGGCCACTCCCTATGGGATTCGGAACCAGAAGTCTCAAACTGGTAGTTTCCTTTaGGATTTTACAACTAGAAGC | + |
|
Preference number: 3 (lower is better) Translates to: ALCLPLATPYGIRNQKSQTGSFL*DFTTRS Trigger: GCTTCTAGTTGTAAAATCCAAAAGGAAACTACCAGT...TTGAGACTTCTGGTTCCGAATCCCATAGGGAGTGGCCAGTGGGAGACATAGTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049488.9 |
||
| 3UTR-3UTR CAA 90 bp | TGTTTAGAGCTAGTATACAGCTATGCTTTGTGTGATTCTCCTCTCTTTGAACTGCCACACTTGCACAGCTaGTCTGGCCGATCTGTGTGG | + |
|
Preference number: 3 (lower is better) Translates to: CLELVYSYALCDSPLFELPHLHS*SGRSVW Trigger: CCACACAGATCGGCCAGACAAGCTGTGCAAGTGTGG...CAGTTCAAAGAGAGGAGAATCACACAAAGCATAGCTGTATACTAGCTCTAAACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049488.9 |
||
| 3UTR TCA 72 bp | GACGGCATGAGAACATTATTGGATAAAGACAGAGGGTaGCAATTTGGGAAGGGGGCAATTAACACTGGCGTG | + |
|
Preference number: 3 (lower is better) Translates to: DGMRTLLDKDRG*QFGKGAINTGV Trigger: CACGCCAGTGTTAATTGCCCCCTTCCCAAATTGTCACCCTCTGTCTTTATCCAATAATGTTCTCATGCCGTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049488.9 |
||
| 3UTR TCA 72 bp | CCGCACACGAAAAAGAGCCACTGGTTAGAAAGGCATTaGAGCAGAGATGCCCAGAAGTTTAAATGCAAGCTC | + |
|
Preference number: 3 (lower is better) Translates to: PHTKKSHWLERH*SRDAQKFKCKL Trigger: GAGCTTGCATTTAAACTTCTGGGCATCTCTGCTTCAATGCCTTTCTAACCAGTGGCTCTTTTTCGTGTGCGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049488.9 |
||
| 3UTR CCA 72 bp | CTTCCTTATGAAGCCCTTTCACTTCTTGGCAGTATGTaGGATGTGCACTGGTTTATGTTTCCGCACACGAAA | + |
|
Preference number: 3 (lower is better) Translates to: LPYEALSLLGSM*DVHWFMFPHTK Trigger: TTTCGTGTGCGGAAACATAAACCAGTGCACATCCCACATACTGCCAAGAAGTGAAAGGGCTTCATAAGGAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049488.9 |
||
| 3UTR-3UTR CAA 90 bp | TATGTTTCCGCACACGAAAAAGAGCCACTGGTTAGAAAGGCATTGAAGCAGAGAGAAGATTCTGACATTTaGGCTTGTGGGAATCAGGCT | + |
|
Preference number: 3 (lower is better) Translates to: YVSAHEKEPLVRKALKQREDSDI*ACGNQA Trigger: AGCCTGATTCCCACAAGCCAAAATGTCAGAATCTTC...TCTCTGCTTCAATGCCTTTCTAACCAGTGGCTCTTTTTCGTGTGCGGAAACATA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049488.9 |
||
| 3UTR TCA 72 bp | CATTTTACTCATAAAACACTAGAGGGAGAGAACACATaGTTTCTAAACTCTGCCTCCAGGGCTGCCATGGCT | + |
|
Preference number: 3 (lower is better) Translates to: HFTHKTLEGENT*FLNSASRAAMA Trigger: AGCCATGGCAGCCCTGGAGGCAGAGTTTAGAAATCATGTGTTCTCTCCCTCTAGTGTTTTATGAGTAAAATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049488.9 |
||
| 3UTR GCA 72 bp | CTGCAACCCTCCACTACTTGGGCAAAGACAACAACATaGATCTTGTTTTACAGTCACATGAACACTGCCATA | + |
|
Preference number: 3 (lower is better) Translates to: LQPSTTWAKTTT*ILFYSHMNTAI Trigger: TATGGCAGTGTTCATGTGACTGTAAAACAAGATGCATGTTGTTGTCTTTGCCCAAGTAGTGGAGGGTTGCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049488.9 |
||
| 3UTR-3UTR CAA 90 bp | GACAGCTCATCTCTGCAGGGAATAAAATGTTTACTAGTCTCAGTCACAGAAGAACTGGTTAGAAAGGCATaGAAGCAGAGATGCCCAGAA | + |
|
Preference number: 3 (lower is better) Translates to: DSSSLQGIKCLLVSVTEELVRKA*KQRCPE Trigger: TTCTGGGCATCTCTGCTTCAATGCCTTTCTAACCAG...TTCTTCTGTGACTGAGACTAGTAAACATTTTATTCCCTGCAGAGATGAGCTGTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049488.9 |
||
| 3UTR TCA 72 bp | TTTTCACATTATTACAAACACTACCTTAGACAAGAATaGAGGACCTCTGCCAAGGGCAGAGAGGACAAGAAG | + |
|
Preference number: 3 (lower is better) Translates to: FSHYYKHYLRQE*RTSAKGREDKK Trigger: CTTCTTGTCCTCTCTGCCCTTGGCAGAGGTCCTTCATTCTTGTCTAAGGTAGTGTTTGTAATAATGTGAAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049488.9 |
||
| 3UTR GCA 72 bp | CTTCTTGAAGTCAATTGGGCAAATGCATTCCAGTTCTaGCCTTGCCCAACTAAAACAAAATCAGATACACCT | + |
|
Preference number: 3 (lower is better) Translates to: LLEVNWANAFQF*PCPTKTKSDTP Trigger: AGGTGTATCTGATTTTGTTTTAGTTGGGCAAGGGCAGAACTGGAATGCATTTGCCCAATTGACTTCAAGAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049488.9 |
||
| 3UTR-3UTR CAA 90 bp | GTCAATTGGGCAAATGCATTCCAGTTCTGCCCTTGCCCAACTAAAACAAAATCATGTTTCCTGAAAGCTTaGTCAGACCTACTTAAGCTA | + |
|
Preference number: 3 (lower is better) Translates to: VNWANAFQFCPCPTKTKSCFLKA*SDLLKL Trigger: TAGCTTAAGTAGGTCTGACAAAGCTTTCAGGAAACA...TGATTTTGTTTTAGTTGGGCAAGGGCAGAACTGGAATGCATTTGCCCAATTGAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049488.9 |
||
| 3UTR-3UTR CAA 90 bp | GACAGCTCATCTCTGCAGGGAATAAAATGTTTACTAGTCTCAGTCACAGAAGAAAGGACTCAAGTGTTTTaGTTGTTGCTTCTTTATGCC | + |
|
Preference number: 3 (lower is better) Translates to: DSSSLQGIKCLLVSVTEERTQVF*LLLLYA Trigger: GGCATAAAGAAGCAACAACAAAAACACTTGAGTCCT...TTCTTCTGTGACTGAGACTAGTAAACATTTTATTCCCTGCAGAGATGAGCTGTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049488.9 |
||
| 3UTR-3UTR CAA 90 bp | TTTAAAAGCAAGGTAACATTGCTGTTGTTATCTCAAAACAATGGCACACTTTCCTCCAACCACCGACTTTaGCATCTCAGCCTAATTCCA | + |
|
Preference number: 3 (lower is better) Translates to: FKSKVTLLLLSQNNGTLSSNHRL*HLSLIP Trigger: TGGAATTAGGCTGAGATGCAAAAGTCGGTGGTTGGA...GGAAAGTGTGCCATTGTTTTGAGATAACAACAGCAATGTTACCTTGCTTTTAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049488.9 |
||
| 3UTR GCA 72 bp | AAAGCATTACTGTTAATGACACTCACAAGTAAGAACTaGAACCCTCCACTACTTGGGCAAAGACAACAACAT | + |
|
Preference number: 3 (lower is better) Translates to: KALLLMTLTSKN*NPPLLGQRQQH Trigger: ATGTTGTTGTCTTTGCCCAAGTAGTGGAGGGTTGCAGTTCTTACTTGTGAGTGTCATTAACAGTAATGCTTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049488.9 |
||
| 3UTR-3UTR CAA 90 bp | ACTATGAACATTGGCACTAAAATGCACACTTGTGAGCACTGCTTTCCAAAAGCAACAACAACATGCATCTaGTTTTACAGTCACATGAAC | + |
|
Preference number: 3 (lower is better) Translates to: TMNIGTKMHTCEHCFPKATTTCI*FYSHMN Trigger: GTTCATGTGACTGTAAAACAAGATGCATGTTGTTGT...TGCTTTTGGAAAGCAGTGCTCACAAGTGTGCATTTTAGTGCCAATGTTCATAGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000049488.9 |
||
| 3UTR GCA 72 bp | ATGAACATTGGCACTAAAATGCACACTTGTGAGCACTaGTTTCCAAAAGCATATCTAGGAATTTGTATGGAT | + |
|
Preference number: 3 (lower is better) Translates to: MNIGTKMHTCEH*FPKAYLGICMD Trigger: ATCCATACAAATTCCTAGATATGCTTTTGGAAAGCAGTGCTCACAAGTGTGCATTTTAGTGCCAATGTTCAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049488.9 |
||
| 3UTR CCA 72 bp | AAGCAAGGTAACATTGCTGTTGTTATCTCAAAACAATaGCACACTTTCCAGTTTTCTCCAGTTTCACAAACA | + |
|
Preference number: 3 (lower is better) Translates to: KQGNIAVVISKQ*HTFQFSPVSQT Trigger: TGTTTGTGAAACTGGAGAAAACTGGAAAGTGTGCCATTGTTTTGAGATAACAACAGCAATGTTACCTTGCTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049488.9 |
||
| CDS-3UTR CCA 90 bp | CCTGGTGCACACGTTCAAAGGGCAGCCCTCCACAGTGGGCACAGGCCTGCTGAGGGACGCAGGGTGAGATaGCTACCAGAGAGATTAGCA | + |
|
Preference number: 4 (lower is better) Translates to: PGAHVQRAALHSGHRPAEGRRVR*LPERLA Trigger: TGCTAATCTCTCTGGTAGCCATCTCACCCTGCGTCC...CTCAGCAGGCCTGTGCCCACTGTGGAGGGCTGCCCTTTGAACGTGTGCACCAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049488.9 |
||
| 3UTR CAA 72 bp | CACAGCTTGTCTGGCCGATCTGTGTGGCCAGCTCTGTaGGAAGCTGCTTGGGAACCTTACCCCAGCCCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: HSLSGRSVWPAL*EAAWEPYPSPP Trigger: AGGAGGGCTGGGGTAAGGTTCCCAAGCAGCTTCCAACAGAGCTGGCCACACAGATCGGCCAGACAAGCTGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049488.9 |
||
| CDS-3UTR GCA 90 bp | TGTGGCCAGCTCTGTTGGAAGCTGCTTGGGAACCTTACCCCAGCCCTCCTCTACACGCATAGGCCACCGTaGACTCCCAGGAGAATCTTG | + |
|
Preference number: 4 (lower is better) Translates to: CGQLCWKLLGNLTPALLYTHRPP*TPRRIL Trigger: CAAGATTCTCCTGGGAGTGCACGGTGGCCTATGCGT...GTAGAGGAGGGCTGGGGTAAGGTTCCCAAGCAGCTTCCAACAGAGCTGGCCACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049488.9 |
||
| CDS-3UTR TCA 90 bp | GGCACTATGTCTCCCACTGGCCACTCCCTATGGGATTCGGAACCAGAAGTCTCAACAGCTTATGAGCCCTaGCTGCAGCAGCCCAGAGTG | + |
|
Preference number: 4 (lower is better) Translates to: GTMSPTGHSLWDSEPEVSTAYEP*LQQPRV Trigger: CACTCTGGGCTGCTGCAGTCAGGGCTCATAAGCTGT...TGAGACTTCTGGTTCCGAATCCCATAGGGAGTGGCCAGTGGGAGACATAGTGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049488.9 |
||
| CDS-3UTR GCA 90 bp | CCTGGTGCACACGTTCAAAGGGCAGCCCTCCACAGTGGGCACAGGCCTGCTGAGTTCTTGACGTTCTGCTaGTCTTCAGTGTCTTCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: PGAHVQRAALHSGHRPAEFLTFC*SSVSSP Trigger: TGGAGAAGACACTGAAGAGCAGCAGAACGTCAAGAA...CTCAGCAGGCCTGTGCCCACTGTGGAGGGCTGCCCTTTGAACGTGTGCACCAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049488.9 |
||
| 3UTR CAA 72 bp | CAACCAAGACTTAGGCAGCTAGAAAGTGAATGGGGCTaGGTTCAGAGGGAAGCCACCGGGGCAGCCACTGGT | + |
|
Preference number: 4 (lower is better) Translates to: QPRLRQLESEWG*VQREATGAATG Trigger: ACCAGTGGCTGCCCCGGTGGCTTCCCTCTGAACCAAGCCCCATTCACTTTCTAGCTGCCTAAGTCTTGGTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049488.9 |
||
| CDS-3UTR TCA 90 bp | GGCACTATGTCTCCCACTGGCCACTCCCTATGGGATTCGGAACCAGAAGTCTCACTTGCTGGTCAGTGCTaGGAAGGTGAGGTAGGTGAC | + |
|
Preference number: 4 (lower is better) Translates to: GTMSPTGHSLWDSEPEVSLAGQC*EGEVGD Trigger: GTCACCTACCTCACCTTCTCAGCACTGACCAGCAAG...TGAGACTTCTGGTTCCGAATCCCATAGGGAGTGGCCAGTGGGAGACATAGTGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049488.9 |
||
| CDS-3UTR GCA 90 bp | TGTGGCCAGCTCTGTTGGAAGCTGCTTGGGAACCTTACCCCAGCCCTCCTCTACATTACGGACGGTGCCTaGAGTCCAGTTCTTGTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: CGQLCWKLLGNLTPALLYITDGA*SPVLVP Trigger: TGGAACAAGAACTGGACTGCAGGCACCGTCCGTAAT...GTAGAGGAGGGCTGGGGTAAGGTTCCCAAGCAGCTTCCAACAGAGCTGGCCACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049488.9 |
||
| CDS-3UTR CCA 90 bp | GGCACTATGTCTCCCACTGGCCACTCCCTATGGGATTCGGAACCAGAAGTCTCATGTGGCTGTCGATTCTaGACGCAGGGTGAGATGGCT | + |
|
Preference number: 4 (lower is better) Translates to: GTMSPTGHSLWDSEPEVSCGCRF*TQGEMA Trigger: AGCCATCTCACCCTGCGTCCAGAATCGACAGCCACA...TGAGACTTCTGGTTCCGAATCCCATAGGGAGTGGCCAGTGGGAGACATAGTGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049488.9 |
||
| CDS-3UTR TCA 90 bp | GGCACTATGTCTCCCACTGGCCACTCCCTATGGGATTCGGAACCAGAAGTCTCAATTCTGGACGCAGGGTaGGATGGCTACCAGAGAGAT | + |
|
Preference number: 4 (lower is better) Translates to: GTMSPTGHSLWDSEPEVSILDAG*DGYQRD Trigger: ATCTCTCTGGTAGCCATCTCACCCTGCGTCCAGAAT...TGAGACTTCTGGTTCCGAATCCCATAGGGAGTGGCCAGTGGGAGACATAGTGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049488.9 |
||
| CDS-3UTR CCA 90 bp | AGTTCAAAAGTCACCACGCCTGGCTTCCAGTCTCAGCAGAGACAAACCTTGGCACAGCAGCCCAGAGTGTaGCTGTCGATTCTGGACGCA | + |
|
Preference number: 4 (lower is better) Translates to: SSKVTTPGFQSQQRQTLAQQPRV*LSILDA Trigger: TGCGTCCAGAATCGACAGCCACACTCTGGGCTGCTG...TGCCAAGGTTTGTCTCTGCTGAGACTGGAAGCCAGGCGTGGTGACTTTTGAACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049488.9 |
||
| CDS-3UTR TCA 90 bp | TGTGGCCAGCTCTGTTGGAAGCTGCTTGGGAACCTTACCCCAGCCCTCCTCTACAACTTTTGCTGTTGTTaGCTTTTAAGGTCAGCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: CGQLCWKLLGNLTPALLYNFCCC*LLRSAG Trigger: GCCTGCTGACCTTAAAAGTCAACAACAGCAAAAGTT...GTAGAGGAGGGCTGGGGTAAGGTTCCCAAGCAGCTTCCAACAGAGCTGGCCACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000049488.9 |
||
| CDS-3UTR TCA 90 bp | TATGTTTCCGCACACGAAAAAGAGCCACTGGTTAGAAAGGCATTGAAGCAGAGAAGCAGGAGGCCATCTTaGCCCAGAAGACGGACCAGC | + |
|
Preference number: 4 (lower is better) Translates to: YVSAHEKEPLVRKALKQRSRRPS*PRRRTS Trigger: GCTGGTCCGTCTTCTGGGTCAAGATGGCCTCCTGCT...TCTCTGCTTCAATGCCTTTCTAACCAGTGGCTCTTTTTCGTGTGCGGAAACATA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049488.9 |
||
| 3UTR CAA 72 bp | CTTTTGCATCTCAGCCTAATTCCACACTTGCACAGCTaGTCTGGCCGATCTGTGTGGCCAGCTCTGTTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: LLHLSLIPHLHS*SGRSVWPALLE Trigger: TTCCAACAGAGCTGGCCACACAGATCGGCCAGACAAGCTGTGCAAGTGTGGAATTAGGCTGAGATGCAAAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049488.9 |
||
| 3UTR CAA 72 bp | CCCCACCTTAGGCTGAGGACTCAAGTGTTTTTGTTGTaGCTTCTTTATGCCAAGGATGAGAGTGACAGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: PHLRLRTQVFLL*LLYAKDESDRP Trigger: TGGCCTGTCACTCTCATCCTTGGCATAAAGAAGCAACAACAAAAACACTTGAGTCCTCAGCCTAAGGTGGGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049488.9 |
||
| 3UTR CAA 72 bp | GCCAAGCCCCACCTTAGGCTGAGGACTCAAGTGTTTTaGTTGTTGCTTCTTTATGCCAAGGATGAGAGTGAC | + |
|
Preference number: 4 (lower is better) Translates to: AKPHLRLRTQVF*LLLLYAKDESD Trigger: GTCACTCTCATCCTTGGCATAAAGAAGCAACAACAAAAACACTTGAGTCCTCAGCCTAAGGTGGGGCTTGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049488.9 |
||
| CDS-3UTR GCA 90 bp | ACTATGAACATTGGCACTAAAATGCACACTTGTGAGCACTGCTTTCCAAAAGCACTTATGAGCCCTGACTaGAGCAGCCCAGAGTGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: TMNIGTKMHTCEHCFPKALMSPD*SSPECG Trigger: GCCACACTCTGGGCTGCTGCAGTCAGGGCTCATAAG...TGCTTTTGGAAAGCAGTGCTCACAAGTGTGCATTTTAGTGCCAATGTTCATAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049488.9 |
||
| CDS-3UTR TCA 90 bp | TATGTTTCCGCACACGAAAAAGAGCCACTGGTTAGAAAGGCATTGAAGCAGAGAGCGTCACCACCGGCTTaGGTCTTTTTACAGAACTCT | + |
|
Preference number: 4 (lower is better) Translates to: YVSAHEKEPLVRKALKQRASPPA*VFLQNS Trigger: AGAGTTCTGTAAAAAGACTCAAGCCGGTGGTGACGC...TCTCTGCTTCAATGCCTTTCTAACCAGTGGCTCTTTTTCGTGTGCGGAAACATA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000049488.9 |
||
| CDS-3UTR TCA 90 bp | ACTATGAACATTGGCACTAAAATGCACACTTGTGAGCACTGCTTTCCAAAAGCAGGAGCTGGATACAAATaGAGAGGAAGCTGCCCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: TMNIGTKMHTCEHCFPKAGAGYK*RGSCPQ Trigger: CTGGGGGCAGCTTCCTCTTCATTTGTATCCAGCTCC...TGCTTTTGGAAAGCAGTGCTCACAAGTGTGCATTTTAGTGCCAATGTTCATAGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000049488.9 |
||
| CDS-3UTR GCA 90 bp | AGTTCAAAAGTCACCACGCCTGGCTTCCAGTCTCAGCAGAGACAAACCTTGGCAAGTAGCTGTACACGGTaGCTTTCTTCTCATCATAAA | + |
|
Preference number: 4 (lower is better) Translates to: SSKVTTPGFQSQQRQTLASSCTR*LSSHHK Trigger: TTTATGATGAGAAGAAAGGCACCGTGTACAGCTACT...TGCCAAGGTTTGTCTCTGCTGAGACTGGAAGCCAGGCGTGGTGACTTTTGAACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049488.9 |
||
| 3UTR CAA 72 bp | AAGCCCCACCTTAGGCTGAGGACTCAAGTGTTTTTGTaGTTGCTTCTTTATGCCAAGGATGAGAGTGACAGG | + |
|
Preference number: 4 (lower is better) Translates to: KPHLRLRTQVFL*LLLYAKDESDR Trigger: CCTGTCACTCTCATCCTTGGCATAAAGAAGCAACAACAAAAACACTTGAGTCCTCAGCCTAAGGTGGGGCTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049488.9 |
||
| CDS-3UTR TCA 90 bp | GACAGCTCATCTCTGCAGGGAATAAAATGTTTACTAGTCTCAGTCACAGAAGAATCTCCTGATCCGGAATaGAGAACGCTCCTGAGCACA | + |
|
Preference number: 4 (lower is better) Translates to: DSSSLQGIKCLLVSVTEESPDPE*RTLLST Trigger: TGTGCTCAGGAGCGTTCTTCATTCCGGATCAGGAGA...TTCTTCTGTGACTGAGACTAGTAAACATTTTATTCCCTGCAGAGATGAGCTGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049488.9 |
||
| CDS-3UTR CCA 90 bp | ACTATGAACATTGGCACTAAAATGCACACTTGTGAGCACTGCTTTCCAAAAGCAACGCTCCTGAGCACATaGCCCCTAACAGCAGCAATT | + |
|
Preference number: 4 (lower is better) Translates to: TMNIGTKMHTCEHCFPKATLLST*PLTAAI Trigger: AATTGCTGCTGTTAGGGGCCATGTGCTCAGGAGCGT...TGCTTTTGGAAAGCAGTGCTCACAAGTGTGCATTTTAGTGCCAATGTTCATAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000049488.9 |
||
| CDS-3UTR TCA 90 bp | ACTATGAACATTGGCACTAAAATGCACACTTGTGAGCACTGCTTTCCAAAAGCAGAAGACGGACCAGCCTaGGAAGAAGGTCTTAATGGT | + |
|
Preference number: 4 (lower is better) Translates to: TMNIGTKMHTCEHCFPKAEDGPA*EEGLNG Trigger: ACCATTAAGACCTTCTTCTCAGGCTGGTCCGTCTTC...TGCTTTTGGAAAGCAGTGCTCACAAGTGTGCATTTTAGTGCCAATGTTCATAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049488.9 |
||
| CDS-3UTR GCA 90 bp | GTCAATTGGGCAAATGCATTCCAGTTCTGCCCTTGCCCAACTAAAACAAAATCACAATTAGAAGAAGGGTaGCCAGCCAAGTCACCATGT | + |
|
Preference number: 4 (lower is better) Translates to: VNWANAFQFCPCPTKTKSQLEEG*PAKSPC Trigger: ACATGGTGACTTGGCTGGGCACCCTTCTTCTAATTG...TGATTTTGTTTTAGTTGGGCAAGGGCAGAACTGGAATGCATTTGCCCAATTGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049488.9 |
||
| CDS-3UTR CCA 90 bp | TATGTTTCCGCACACGAAAAAGAGCCACTGGTTAGAAAGGCATTGAAGCAGAGAACAATCAGGAGGAGCTaGATACAAATGAAGAGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: YVSAHEKEPLVRKALKQRTIRRS*IQMKRK Trigger: CTTCCTCTTCATTTGTATCCAGCTCCTCCTGATTGT...TCTCTGCTTCAATGCCTTTCTAACCAGTGGCTCTTTTTCGTGTGCGGAAACATA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049488.9 |
||
| 3UTR CAA 72 bp | GGTACAGTAGTGAGTAGAAATGAAGATTCTGACATTTaGGCTTGTGGGAATCAGGCTTATGTGGGTCCCAAT | + |
|
Preference number: 4 (lower is better) Translates to: GTVVSRNEDSDI*ACGNQAYVGPN Trigger: ATTGGGACCCACATAAGCCTGATTCCCACAAGCCAAAATGTCAGAATCTTCATTTCTACTCACTACTGTACC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049488.9 |
||
| CDS-3UTR TCA 90 bp | GACAGCTCATCTCTGCAGGGAATAAAATGTTTACTAGTCTCAGTCACAGAAGAAAGTAGAATAAATACATaGAGCGGGTGGTCCGAGACT | + |
|
Preference number: 4 (lower is better) Translates to: DSSSLQGIKCLLVSVTEESRINT*SGWSET Trigger: AGTCTCGGACCACCCGCTTCATGTATTTATTCTACT...TTCTTCTGTGACTGAGACTAGTAAACATTTTATTCCCTGCAGAGATGAGCTGTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049488.9 |
||
| 3UTR CAA 72 bp | TGGGTAAGGCATAAAGAGATAATTGCACCTACCAGCTaGGCTAAAGATTTCAATTCCTGTCGATCTAACTGG | + |
|
Preference number: 4 (lower is better) Translates to: WVRHKEIIAPTS*AKDFNSCRSNW Trigger: CCAGTTAGATCGACAGGAATTGAAATCTTTAGCCAAGCTGGTAGGTGCAATTATCTCTTTATGCCTTACCCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049488.9 |
||
| CDS-3UTR TCA 90 bp | TTTAAAAGCAAGGTAACATTGCTGTTGTTATCTCAAAACAATGGCACACTTTCCTCTCTATGCAGGTCTTaGCCAAAGTCAGGCGCACAT | + |
|
Preference number: 4 (lower is better) Translates to: FKSKVTLLLLSQNNGTLSSLCRS*PKSGAH Trigger: ATGTGCGCCTGACTTTGGTCAAGACCTGCATAGAGA...GGAAAGTGTGCCATTGTTTTGAGATAACAACAGCAATGTTACCTTGCTTTTAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049488.9 |
||
| CDS-3UTR GCA 90 bp | GACAGCTCATCTCTGCAGGGAATAAAATGTTTACTAGTCTCAGTCACAGAAGAACTTGTTCCACTTATGTaGAAACTGCACAATCAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: DSSSLQGIKCLLVSVTEELVPLM*KLHNQE Trigger: CTCCTGATTGTGCAGTTTGCACATAAGTGGAACAAG...TTCTTCTGTGACTGAGACTAGTAAACATTTTATTCCCTGCAGAGATGAGCTGTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049488.9 |
||
| 3UTR CAA 72 bp | AAGCAAAGGCCTGTTATCTTTAAAAGCAAGGTAACATaGCTGTTGTTATCTCAAAACAATGGCACACTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: KQRPVIFKSKVT*LLLSQNNGTLS Trigger: GGAAAGTGTGCCATTGTTTTGAGATAACAACAGCAATGTTACCTTGCTTTTAAAGATAACAGGCCTTTGCTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049488.9 |
||
| 3UTR CAA 72 bp | AGGCCTGTTATCTTTAAAAGCAAGGTAACATTGCTGTaGTTATCTCAAAACAATGGCACACTTTCCAGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: RPVIFKSKVTLL*LSQNNGTLSSF Trigger: AAAACTGGAAAGTGTGCCATTGTTTTGAGATAACAACAGCAATGTTACCTTGCTTTTAAAGATAACAGGCCT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049488.9 |
||
| CDS-3UTR GCA 90 bp | TTTAAAAGCAAGGTAACATTGCTGTTGTTATCTCAAAACAATGGCACACTTTCCAACATGAATATGAGATaGACACAATTAGAAGAAGGG | + |
|
Preference number: 4 (lower is better) Translates to: FKSKVTLLLLSQNNGTLSNMNMR*TQLEEG Trigger: CCCTTCTTCTAATTGTGTGCATCTCATATTCATGTT...GGAAAGTGTGCCATTGTTTTGAGATAACAACAGCAATGTTACCTTGCTTTTAAA 34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049488.9 |
||
| CDS CCA 90 bp | GCAGCAGCCCAGAGTGTGGCTGTCGATTCTGGACGCAGGGTGAGATaGCTACCAGAGAGATTAGCACGCATAGGCCACCGTGCACTCCCA | + |
|
Preference number: 5 (lower is better) Translates to: AAAQSVAVDSGRRVR*LPERLARIGHRALP Trigger: TGGGAGTGCACGGTGGCCTATGCGTGCTAATCTCTCTGGTAGCCATCTCACCCTGCGTCCAGAATCGACAGCCACACTCTGGGCTGCTGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049488.9 |
||
| CDS CCA 90 bp | TCCATCTGGACCAAAGCAGAAACAGCACCGGGCCACTTCCAGCTCTaGCGCTCCGTATCGACTCTGCAGAGCATCCGAGCTCGACCTTGT | + |
|
Preference number: 5 (lower is better) Translates to: SIWTKAETAPGHFQL*RSVSTLQSIRARPC Trigger: ACAAGGTCGAGCTCGGATGCTCTGCAGAGTCGATACGGAGCGCCAGAGCTGGAAGTGGCCCGGTGCTGTTTCTGCTTTGGTCCAGATGGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049488.9 |
||
| CDS-3UTR CAA 90 bp | GGCACTATGTCTCCCACTGGCCACTCCCTATGGGATTCGGAACCAGAAGTCTCACAGCAGGAGGCCATCTaGACCCAGAAGACGGACCAG | + |
|
Preference number: 5 (lower is better) Translates to: GTMSPTGHSLWDSEPEVSQQEAI*TQKTDQ Trigger: CTGGTCCGTCTTCTGGGTCAAGATGGCCTCCTGCTG...TGAGACTTCTGGTTCCGAATCCCATAGGGAGTGGCCAGTGGGAGACATAGTGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049488.9 |
||
| CDS GCA 90 bp | CAGGGTGAGATGGCTACCAGAGAGATTAGCACGCATAGGCCACCGTaGACTCCCAGGAGAATCTTGTTGTCCATGCAGTCGTCCCACTGT | + |
|
Preference number: 5 (lower is better) Translates to: QGEMATREISTHRPP*TPRRILLSMQSSHC Trigger: ACAGTGGGACGACTGCATGGACAACAAGATTCTCCTGGGAGTGCACGGTGGCCTATGCGTGCTAATCTCTCTGGTAGCCATCTCACCCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049488.9 |
||
| CDS GCA 90 bp | GCACGCATAGGCCACCGTGCACTCCCAGGAGAATCTTGTTGTCCATaGAGTCGTCCCACTGTGTGTAAAACACTGCCATCAAAGCCAAGC | + |
|
Preference number: 5 (lower is better) Translates to: ARIGHRALPGESCCP*SRPTVCKTLPSKPS Trigger: GCTTGGCTTTGATGGCAGTGTTTTACACACAGTGGGACGACTGCATGGACAACAAGATTCTCCTGGGAGTGCACGGTGGCCTATGCGTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049488.9 |
||
| CDS TCA 90 bp | TCCACTTATGTGCAAACTGCACAATCAGGAGGAGCTGGATACAAATaGAGAGGAAGCTGCCCCCAGCTCCCACATAGCGCCAGACTTTCA | + |
|
Preference number: 5 (lower is better) Translates to: STYVQTAQSGGAGYK*RGSCPQLPHSARLS Trigger: TGAAAGTCTGGCGCTATGTGGGAGCTGGGGGCAGCTTCCTCTTCATTTGTATCCAGCTCCTCCTGATTGTGCAGTTTGCACATAAGTGGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049488.9 |
||
| CDS-3UTR CAA 90 bp | GCACTATGTCTCCCACTGGCCACTCCCTATGGGATTCGGAACCAGAAGTCTCAACCTGCAGTCCAGTTCTaGTTCCACTTATGTGCAAAC | + |
|
Preference number: 5 (lower is better) Translates to: ALCLPLATPYGIRNQKSQPAVQF*FHLCAN Trigger: GTTTGCACATAAGTGGAACAAGAACTGGACTGCAGG...TTGAGACTTCTGGTTCCGAATCCCATAGGGAGTGGCCAGTGGGAGACATAGTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049488.9 |
||
| CDS TCA 90 bp | AGGGTGCCCAGCCAAGTCACCATGTTTTCATCTCTATGCAGGTCTTaGCCAAAGTCAGGCGCACATATGGTAACATTCTTCCCATGTTCA | + |
|
Preference number: 5 (lower is better) Translates to: RVPSQVTMFSSLCRS*PKSGAHMVTFFPCS Trigger: TGAACATGGGAAGAATGTTACCATATGTGCGCCTGACTTTGGTCAAGACCTGCATAGAGATGAAAACATGGTGACTTGGCTGGGCACCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049488.9 |
||
| CDS GCA 90 bp | GAGAATCTTGTTGTCCATGCAGTCGTCCCACTGTGTGTAAAACACTaGCATCAAAGCCAAGCCTCCAACAGCAACGGAATACATGATGAG | + |
|
Preference number: 5 (lower is better) Translates to: ENLVVHAVVPLCVKH*HQSQASNSNGIHDE Trigger: CTCATCATGTATTCCGTTGCTGTTGGAGGCTTGGCTTTGATGGCAGTGTTTTACACACAGTGGGACGACTGCATGGACAACAAGATTCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049488.9 |
||
| CDS GCA 90 bp | CTTATTACGGACGGTGCCTGCAGTCCAGTTCTTGTTCCACTTATGTaGAAACTGCACAATCAGGAGGAGCTGGATACAAATGAAGAGGAA | + |
|
Preference number: 5 (lower is better) Translates to: LITDGACSPVLVPLM*KLHNQEELDTNEEE Trigger: TTCCTCTTCATTTGTATCCAGCTCCTCCTGATTGTGCAGTTTGCACATAAGTGGAACAAGAACTGGACTGCAGGCACCGTCCGTAATAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049488.9 |
||
| CDS GCA 90 bp | CATCCGAGCTCGACCTTGTTGTCGATGTCAAACATGAATATGAGATaGACACAATTAGAAGAAGGGTGCCCAGCCAAGTCACCATGTTTT | + |
|
Preference number: 5 (lower is better) Translates to: HPSSTLLSMSNMNMR*TQLEEGCPAKSPCF Trigger: AAAACATGGTGACTTGGCTGGGCACCCTTCTTCTAATTGTGTGCATCTCATATTCATGTTTGACATCGACAACAAGGTCGAGCTCGGATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049488.9 |
||
| CDS-3UTR CAA 90 bp | TGTTTAGAGCTAGTATACAGCTATGCTTTGTGTGATTCTCCTCTCTTTGAACTGCCCAGGAGAATCTTGTaGTCCATGCAGTCGTCCCAC | + |
|
Preference number: 5 (lower is better) Translates to: CLELVYSYALCDSPLFELPRRIL*SMQSSH Trigger: GTGGGACGACTGCATGGACAACAAGATTCTCCTGGG...CAGTTCAAAGAGAGGAGAATCACACAAAGCATAGCTGTATACTAGCTCTAAACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049488.9 |
||
| CDS-3UTR CAA 90 bp | TATGTTTCCGCACACGAAAAAGAGCCACTGGTTAGAAAGGCATTGAAGCAGAGACGGCAACTTTTGCTGTaGTTGACTTTTAAGGTCAGC | + |
|
Preference number: 5 (lower is better) Translates to: YVSAHEKEPLVRKALKQRRQLLL*LTFKVS Trigger: GCTGACCTTAAAAGTCAACAACAGCAAAAGTTGCCG...TCTCTGCTTCAATGCCTTTCTAACCAGTGGCTCTTTTTCGTGTGCGGAAACATA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000049488.9 |
||
| CDS-3UTR CAA 90 bp | ACTATGAACATTGGCACTAAAATGCACACTTGTGAGCACTGCTTTCCAAAAGCAATCTCTATGCAGGTCTaGACCAAAGTCAGGCGCACA | + |
|
Preference number: 5 (lower is better) Translates to: TMNIGTKMHTCEHCFPKAISMQV*TKVRRT Trigger: TGTGCGCCTGACTTTGGTCAAGACCTGCATAGAGAT...TGCTTTTGGAAAGCAGTGCTCACAAGTGTGCATTTTAGTGCCAATGTTCATAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049488.9 |
||
| CDS GCA 72 bp | TGCCTGGAGGGACAGCAGAGAGGGGCCACCAAGGTCTaGAGGTACAGCAGCACACACATCCAGCAGGAGGCC | + |
|
Preference number: 6 (lower is better) Translates to: CLEGQQRGATKV*RYSSTHIQQEA Trigger: GGCCTCCTGCTGGATGTGTGTGCTGCTGTACCTGCAGACCTTGGTGGCCCCTCTCTGCTGTCCCTCCAGGCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049488.9 |
||
| CDS CCA 72 bp | ACCAAAGCAGAAACAGCACCGGGCCACTTCCAGCTCTaGCGCTCCGTATCGACTCTGCAGAGCATCCGAGCT | + |
|
Preference number: 6 (lower is better) Translates to: TKAETAPGHFQL*RSVSTLQSIRA Trigger: AGCTCGGATGCTCTGCAGAGTCGATACGGAGCGCCAGAGCTGGAAGTGGCCCGGTGCTGTTTCTGCTTTGGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049488.9 |
||
| CDS CCA 72 bp | CAGAGTGTGGCTGTCGATTCTGGACGCAGGGTGAGATaGCTACCAGAGAGATTAGCACGCATAGGCCACCGT | + |
|
Preference number: 6 (lower is better) Translates to: QSVAVDSGRRVR*LPERLARIGHR Trigger: ACGGTGGCCTATGCGTGCTAATCTCTCTGGTAGCCATCTCACCCTGCGTCCAGAATCGACAGCCACACTCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049488.9 |
||
| CDS CAA 72 bp | AGGTACAGCAGCACACACATCCAGCAGGAGGCCATCTaGACCCAGAAGACGGACCAGCCTGAGAAGAAGGTC | + |
|
Preference number: 6 (lower is better) Translates to: RYSSTHIQQEAI*TQKTDQPEKKV Trigger: GACCTTCTTCTCAGGCTGGTCCGTCTTCTGGGTCAAGATGGCCTCCTGCTGGATGTGTGTGCTGCTGTACCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049488.9 |
||
| CDS TCA 72 bp | GTGCAAACTGCACAATCAGGAGGAGCTGGATACAAATaGAGAGGAAGCTGCCCCCAGCTCCCACATAGCGCC | + |
|
Preference number: 6 (lower is better) Translates to: VQTAQSGGAGYK*RGSCPQLPHSA Trigger: GGCGCTATGTGGGAGCTGGGGGCAGCTTCCTCTTCATTTGTATCCAGCTCCTCCTGATTGTGCAGTTTGCAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049488.9 |
||
| CDS CAA 90 bp | AAGGTCTGCAGGTACAGCAGCACACACATCCAGCAGGAGGCCATCTaGACCCAGAAGACGGACCAGCCTGAGAAGAAGGTCTTAATGGTG | + |
|
Preference number: 6 (lower is better) Translates to: KVCRYSSTHIQQEAI*TQKTDQPEKKVLMV Trigger: CACCATTAAGACCTTCTTCTCAGGCTGGTCCGTCTTCTGGGTCAAGATGGCCTCCTGCTGGATGTGTGTGCTGCTGTACCTGCAGACCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049488.9 |
||
| CDS TCA 72 bp | GAAGGTGAGGTAGGTGACATAACAGCTTATGAGCCCTaGCTGCAGCAGCCCAGAGTGTGGCTGTCGATTCTG | + |
|
Preference number: 6 (lower is better) Translates to: EGEVGDITAYEP*LQQPRVWLSIL Trigger: CAGAATCGACAGCCACACTCTGGGCTGCTGCAGTCAGGGCTCATAAGCTGTTATGTCACCTACCTCACCTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049488.9 |
||
| CDS GCA 72 bp | GGCCACCGTGCACTCCCAGGAGAATCTTGTTGTCCATaGAGTCGTCCCACTGTGTGTAAAACACTGCCATCA | + |
|
Preference number: 6 (lower is better) Translates to: GHRALPGESCCP*SRPTVCKTLPS Trigger: TGATGGCAGTGTTTTACACACAGTGGGACGACTGCATGGACAACAAGATTCTCCTGGGAGTGCACGGTGGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049488.9 |
||
| CDS CCA 72 bp | TTCCACTTATGTGCAAACTGCACAATCAGGAGGAGCTaGATACAAATGAAGAGGAAGCTGCCCCCAGCTCCC | + |
|
Preference number: 6 (lower is better) Translates to: FHLCANCTIRRS*IQMKRKLPPAP Trigger: GGGAGCTGGGGGCAGCTTCCTCTTCATTTGTATCCAGCTCCTCCTGATTGTGCAGTTTGCACATAAGTGGAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049488.9 |
||
| CDS GCA 72 bp | GTTGTCCATGCAGTCGTCCCACTGTGTGTAAAACACTaGCATCAAAGCCAAGCCTCCAACAGCAACGGAATA | + |
|
Preference number: 6 (lower is better) Translates to: VVHAVVPLCVKH*HQSQASNSNGI Trigger: TATTCCGTTGCTGTTGGAGGCTTGGCTTTGATGGCAGTGTTTTACACACAGTGGGACGACTGCATGGACAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049488.9 |
||
| CDS CAA 72 bp | CACAGCTTATTACGGACGGTGCCTGCAGTCCAGTTCTaGTTCCACTTATGTGCAAACTGCACAATCAGGAGG | + |
|
Preference number: 6 (lower is better) Translates to: HSLLRTVPAVQF*FHLCANCTIRR Trigger: CCTCCTGATTGTGCAGTTTGCACATAAGTGGAACAAGAACTGGACTGCAGGCACCGTCCGTAATAAGCTGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049488.9 |
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| CDS CAA 90 bp | GCTCTGGCGCTCCGTATCGACTCTGCAGAGCATCCGAGCTCGACCTaGTTGTCGATGTCAAACATGAATATGAGATGCACACAATTAGAA | + |
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Preference number: 6 (lower is better) Translates to: ALALRIDSAEHPSST*LSMSNMNMRCTQLE Trigger: TTCTAATTGTGTGCATCTCATATTCATGTTTGACATCGACAACAAGGTCGAGCTCGGATGCTCTGCAGAGTCGATACGGAGCGCCAGAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049488.9 |
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| CDS GCA 72 bp | GACGGTGCCTGCAGTCCAGTTCTTGTTCCACTTATGTaGAAACTGCACAATCAGGAGGAGCTGGATACAAAT | + |
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Preference number: 6 (lower is better) Translates to: DGACSPVLVPLM*KLHNQEELDTN Trigger: ATTTGTATCCAGCTCCTCCTGATTGTGCAGTTTGCACATAAGTGGAACAAGAACTGGACTGCAGGCACCGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049488.9 |
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| CDS CAA 90 bp | AAGGGTGCCCAGCCAAGTCACCATGTTTTCATCTCTATGCAGGTCTaGACCAAAGTCAGGCGCACATATGGTAACATTCTTCCCATGTTC | + |
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Preference number: 6 (lower is better) Translates to: KGAQPSHHVFISMQV*TKVRRTYGNILPMF Trigger: GAACATGGGAAGAATGTTACCATATGTGCGCCTGACTTTGGTCAAGACCTGCATAGAGATGAAAACATGGTGACTTGGCTGGGCACCCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049488.9 |
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| CDS CAA 90 bp | CTGGCGCTCCGTATCGACTCTGCAGAGCATCCGAGCTCGACCTTGTaGTCGATGTCAAACATGAATATGAGATGCACACAATTAGAAGAA | + |
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Preference number: 6 (lower is better) Translates to: LALRIDSAEHPSSTL*SMSNMNMRCTQLEE Trigger: TTCTTCTAATTGTGTGCATCTCATATTCATGTTTGACATCGACAACAAGGTCGAGCTCGGATGCTCTGCAGAGTCGATACGGAGCGCCAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049488.9 |
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| CDS GCA 72 bp | AGAAGACGAAGTGGAAATAGGAGTAGCTGTACACGGTaGCTTTCTTCTCATCATAAATCACCCTGGGTCCCT | + |
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Preference number: 6 (lower is better) Translates to: RRRSGNRSSCTR*LSSHHKSPWVP Trigger: AGGGACCCAGGGTGATTTATGATGAGAAGAAAGGCACCGTGTACAGCTACTCCTATTTCCACTTCGTCTTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049488.9 |
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| CDS CAA 72 bp | CGTATCGACTCTGCAGAGCATCCGAGCTCGACCTTGTaGTCGATGTCAAACATGAATATGAGATGCACACAA | + |
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Preference number: 6 (lower is better) Translates to: RIDSAEHPSSTL*SMSNMNMRCTQ Trigger: TTGTGTGCATCTCATATTCATGTTTGACATCGACAACAAGGTCGAGCTCGGATGCTCTGCAGAGTCGATACG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049488.9 |
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| CDS TCA 72 bp | AGCCAAGTCACCATGTTTTCATCTCTATGCAGGTCTTaGCCAAAGTCAGGCGCACATATGGTAACATTCTTC | + |
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Preference number: 6 (lower is better) Translates to: SQVTMFSSLCRS*PKSGAHMVTFF Trigger: GAAGAATGTTACCATATGTGCGCCTGACTTTGGTCAAGACCTGCATAGAGATGAAAACATGGTGACTTGGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049488.9 |
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| CDS GCA 72 bp | TCGACCTTGTTGTCGATGTCAAACATGAATATGAGATaGACACAATTAGAAGAAGGGTGCCCAGCCAAGTCA | + |
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Preference number: 6 (lower is better) Translates to: STLLSMSNMNMR*TQLEEGCPAKS Trigger: TGACTTGGCTGGGCACCCTTCTTCTAATTGTGTGCATCTCATATTCATGTTTGACATCGACAACAAGGTCGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049488.9 |
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| CDS CAA 72 bp | CAGCCAAGTCACCATGTTTTCATCTCTATGCAGGTCTaGACCAAAGTCAGGCGCACATATGGTAACATTCTT | + |
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Preference number: 6 (lower is better) Translates to: QPSHHVFISMQV*TKVRRTYGNIL Trigger: AAGAATGTTACCATATGTGCGCCTGACTTTGGTCAAGACCTGCATAGAGATGAAAACATGGTGACTTGGCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049488.9 |
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