Pregenerated sensors for SERINC3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000017707Ensembl transcript IDs: ENSMUST00000017851.4
Found 87 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | AAGGGACCACCTCCATCCCAACCAGGATCCCAAGCAGAACCTATGTACACAGATGAAGTGGAGATAGGATaGTCTGCATTCCAAGCAAGT | + |
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Preference number: 2 (lower is better) Translates to: KGPPPSQPGSQAEPMYTDEVEIG*SAFQAS Trigger: ACTTGCTTGGAATGCAGATCATCCTATCTCCACTTC...ATCTGTGTACATAGGTTCTGCTTGGGATCCTGGTTGGGATGGAGGTGGTCCCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017851.4 |
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| 3UTR-3UTR CCA 90 bp | CCTATTCATCATATGAAGGGACCACCTCCATCCCAACCAGGATCCCAAGCAGAACAGAAAAGGAGACTCTaGTCAGCTTTATCAGTGTCC | + |
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Preference number: 2 (lower is better) Translates to: PIHHMKGPPPSQPGSQAEQKRRL*SALSVS Trigger: GGACACTGATAAAGCTGACCAGAGTCTCCTTTTCTG...TTCTGCTTGGGATCCTGGTTGGGATGGAGGTGGTCCCTTCATATGATGAATAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017851.4 |
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| 3UTR-3UTR CCA 90 bp | TCCCAAACCTATTCATCATATGAAGGGACCACCTCCATCCCAACCAGGATCCCAAACTGCCCTGATACCTaGTGTGAACCTACGTTACAA | + |
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Preference number: 2 (lower is better) Translates to: SQTYSSYEGTTSIPTRIPNCPDT*CEPTLQ Trigger: TTGTAACGTAGGTTCACACCAGGTATCAGGGCAGTT...TGGGATCCTGGTTGGGATGGAGGTGGTCCCTTCATATGATGAATAGGTTTGGGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017851.4 |
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| 3UTR-3UTR TCA 90 bp | GCTGGTCCGCTCATTTTCCTTAGATGGAAGAATGTCTGTCTTGTCTTCACCCCAAGGACACTACACCTCTaGAGAAGGGAAATGTGGATT | + |
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Preference number: 2 (lower is better) Translates to: AGPLIFLRWKNVCLVFTPRTLHL*RREMWI Trigger: AATCCACATTTCCCTTCTTCAGAGGTGTAGTGTCCT...TGGGGTGAAGACAAGACAGACATTCTTCCATCTAAGGAAAATGAGCGGACCAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017851.4 |
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| 3UTR-3UTR TCA 90 bp | ACCACCTCCATCCCAACCAGGATCCCAAGCAGAACCTATGTACACAGATTAAACAGTTCAAATCTCAGATaGACTGCCCTGATACCTGGT | + |
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Preference number: 2 (lower is better) Translates to: TTSIPTRIPSRTYVHRLNSSNLR*TALIPG Trigger: ACCAGGTATCAGGGCAGTTCATCTGAGATTTGAACT...GTTTAATCTGTGTACATAGGTTCTGCTTGGGATCCTGGTTGGGATGGAGGTGGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017851.4 |
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| 3UTR-3UTR TCA 90 bp | GCATTCCAAGCAAGTCTGGGTTATGTGGAAAAGACCCTTTCTAAACAAATACACCTTCTCTCAGCTGTATaGGCAGCTGCATTTCTGGGG | + |
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Preference number: 2 (lower is better) Translates to: AFQASLGYVEKTLSKQIHLLSAV*AAAFLG Trigger: CCCCAGAAATGCAGCTGCTCATACAGCTGAGAGAAG...GTGTATTTGTTTAGAAAGGGTCTTTTCCACATAACCCAGACTTGCTTGGAATGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017851.4 |
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| 3UTR-3UTR TCA 90 bp | GCTGGTCCGCTCATTTTCCTTAGATGGAAGAATGTCTGTCTTGTCTTCACCCCATGCATTTCTGGGGACTaGCCTAAATACATAATTCCT | + |
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Preference number: 2 (lower is better) Translates to: AGPLIFLRWKNVCLVFTPCISGD*PKYIIP Trigger: AGGAATTATGTATTTAGGTCAGTCCCCAGAAATGCA...TGGGGTGAAGACAAGACAGACATTCTTCCATCTAAGGAAAATGAGCGGACCAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000017851.4 |
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| 3UTR-3UTR GCA 90 bp | GCTGGTCCGCTCATTTTCCTTAGATGGAAGAATGTCTGTCTTGTCTTCACCCCAAAATACATAATTCCTTaGCAAGAGCCAGGACACTAC | + |
|
Preference number: 2 (lower is better) Translates to: AGPLIFLRWKNVCLVFTPKYIIP*QEPGHY Trigger: GTAGTGTCCTGGCTCTTGGCAAGGAATTATGTATTT...TGGGGTGAAGACAAGACAGACATTCTTCCATCTAAGGAAAATGAGCGGACCAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000017851.4 |
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| 3UTR-3UTR GCA 90 bp | CCTATTCATCATATGAAGGGACCACCTCCATCCCAACCAGGATCCCAAGCAGAAAGAAGAGGAGCATTTTaGCTGAAATGTCAGATTGAT | + |
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Preference number: 2 (lower is better) Translates to: PIHHMKGPPPSQPGSQAERRGAF*LKCQID Trigger: ATCAATCTGACATTTCAGGCAAAATGCTCCTCTTCT...TTCTGCTTGGGATCCTGGTTGGGATGGAGGTGGTCCCTTCATATGATGAATAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017851.4 |
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| 3UTR-3UTR CCA 90 bp | ACCACCTCCATCCCAACCAGGATCCCAAGCAGAACCTATGTACACAGATTAAACCAAGTCTGGGTTATGTaGAAAAGACCCTTTCTAAAC | + |
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Preference number: 2 (lower is better) Translates to: TTSIPTRIPSRTYVHRLNQVWVM*KRPFLN Trigger: GTTTAGAAAGGGTCTTTTCCACATAACCCAGACTTG...GTTTAATCTGTGTACATAGGTTCTGCTTGGGATCCTGGTTGGGATGGAGGTGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017851.4 |
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| 3UTR-3UTR TCA 90 bp | GCTGGTCCGCTCATTTTCCTTAGATGGAAGAATGTCTGTCTTGTCTTCACCCCAGCAAATGTAATAAACTaGCATGCCTTTGACTTTCAC | + |
|
Preference number: 2 (lower is better) Translates to: AGPLIFLRWKNVCLVFTPANVIN*HAFDFH Trigger: GTGAAAGTCAAAGGCATGTCAGTTTATTACATTTGC...TGGGGTGAAGACAAGACAGACATTCTTCCATCTAAGGAAAATGAGCGGACCAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017851.4 |
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| 3UTR-3UTR TCA 90 bp | ACCACCTCCATCCCAACCAGGATCCCAAGCAGAACCTATGTACACAGATTAAACGTTTCTTACCTACTTTaGTCTTCCCCAGAGAAAATA | + |
|
Preference number: 2 (lower is better) Translates to: TTSIPTRIPSRTYVHRLNVSYLL*SSPEKI Trigger: TATTTTCTCTGGGGAAGATCAAAGTAGGTAAGAAAC...GTTTAATCTGTGTACATAGGTTCTGCTTGGGATCCTGGTTGGGATGGAGGTGGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017851.4 |
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| 3UTR-3UTR GCA 90 bp | GCTGGTCCGCTCATTTTCCTTAGATGGAAGAATGTCTGTCTTGTCTTCACCCCATTATCATACCTCCTTTaGACACTGCTTTTCAGGAAT | + |
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Preference number: 2 (lower is better) Translates to: AGPLIFLRWKNVCLVFTPLSYLL*TLLFRN Trigger: ATTCCTGAAAAGCAGTGTGCAAAGGAGGTATGATAA...TGGGGTGAAGACAAGACAGACATTCTTCCATCTAAGGAAAATGAGCGGACCAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000017851.4 |
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| 3UTR-3UTR TCA 90 bp | AGTGCAGAACCGATACTAGTTTCTCTTGAAAAGCCTGTTTTATCATACCTCCTTAAACTGACATGCCTTTaGCTTTCACACACTCACAAC | + |
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Preference number: 2 (lower is better) Translates to: SAEPILVSLEKPVLSYLLKLTCL*LSHTHN Trigger: GTTGTGAGTGTGTGAAAGTCAAAGGCATGTCAGTTT...AAGGAGGTATGATAAAACAGGCTTTTCAAGAGAAACTAGTATCGGTTCTGCACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017851.4 |
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| 3UTR-3UTR TCA 90 bp | AGTGCAGAACCGATACTAGTTTCTCTTGAAAAGCCTGTTTTATCATACCTCCTTGAGGAGCATTTTGCCTaGAATGTCAGATTGATTTGG | + |
|
Preference number: 2 (lower is better) Translates to: SAEPILVSLEKPVLSYLLEEHFA*NVRLIW Trigger: CCAAATCAATCTGACATTTCAGGCAAAATGCTCCTC...AAGGAGGTATGATAAAACAGGCTTTTCAAGAGAAACTAGTATCGGTTCTGCACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000017851.4 |
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| 3UTR CAA 90 bp | ATCCGCTTTGAAATTTATGGTTCCCCTACTGTTAAAAACAGGTATTaGTCTCACACAGTTAAGCTTAAGGGCCACAATTATCTGCTTCAC | + |
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Preference number: 2 (lower is better) Translates to: IRFEIYGSPTVKNRY*SHTVKLKGHNYLLH Trigger: GTGAAGCAGATAATTGTGGCCCTTAAGCTTAACTGTGTGAGACAAATACCTGTTTTTAACAGTAGGGGAACCATAAATTTCAAAGCGGAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000017851.4 |
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| 3UTR-3UTR CAA 90 bp | TGCATGAGGCCCAGGCAGAGTGCTCAAGGTCACAAGCACAGCATGTACTCAGTGGGAAGAATGTCTGTCTaGTCTTCACCCCAACAGGGC | + |
|
Preference number: 3 (lower is better) Translates to: CMRPRQSAQGHKHSMYSVGRMSV*SSPQQG Trigger: GCCCTGTTGGGGTGAAGACAAGACAGACATTCTTCC...CACTGAGTACATGCTGTGCTTGTGACCTTGAGCACTCTGCCTGGGCCTCATGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017851.4 |
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| 3UTR TCA 72 bp | TCTCTCAGCTGTATGAGCAGCTGCATTTCTGGGGACTaGCCTAAATACATAATTCCTTGCCAAGAGCCAGGA | + |
|
Preference number: 3 (lower is better) Translates to: SLSCMSSCISGD*PKYIIPCQEPG Trigger: TCCTGGCTCTTGGCAAGGAATTATGTATTTAGGTCAGTCCCCAGAAATGCAGCTGCTCATACAGCTGAGAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017851.4 |
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| 3UTR CCA 72 bp | CTAATTTACCAGGCTGGTCCGCTCATTTTCCTTAGATaGAAGAATGTCTGTCTTGTCTTCACCCCAACAGGG | + |
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Preference number: 3 (lower is better) Translates to: LIYQAGPLIFLR*KNVCLVFTPTG Trigger: CCCTGTTGGGGTGAAGACAAGACAGACATTCTTCCATCTAAGGAAAATGAGCGGACCAGCCTGGTAAATTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017851.4 |
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| 3UTR-3UTR CAA 90 bp | TCCCAAACCTATTCATCATATGAAGGGACCACCTCCATCCCAACCAGGATCCCATTTATCATACCTCCTTaGCACACTGCTTTTCAGGAA | + |
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Preference number: 3 (lower is better) Translates to: SQTYSSYEGTTSIPTRIPFIIPP*HTAFQE Trigger: TTCCTGAAAAGCAGTGTGCAAAGGAGGTATGATAAA...TGGGATCCTGGTTGGGATGGAGGTGGTCCCTTCATATGATGAATAGGTTTGGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017851.4 |
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| 3UTR TCA 72 bp | AAACCTCCTCCTCAGTACTTGGAAGTGGAGATAGGATaGTCTGCATTCCAAGCAAGTCTGGGTTATGTGGAA | + |
|
Preference number: 3 (lower is better) Translates to: KPPPQYLEVEIG*SAFQASLGYVE Trigger: TTCCACATAACCCAGACTTGCTTGGAATGCAGATCATCCTATCTCCACTTCCAAGTACTGAGGAGGAGGTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017851.4 |
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| 3UTR GCA 72 bp | TCCTCCTCAGTACTTGGAAGTGGAGATAGGATGATCTaGATTCCAAGCAAGTCTGGGTTATGTGGAAAAGAC | + |
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Preference number: 3 (lower is better) Translates to: SSSVLGSGDRMI*IPSKSGLCGKD Trigger: GTCTTTTCCACATAACCCAGACTTGCTTGGAATGCAGATCATCCTATCTCCACTTCCAAGTACTGAGGAGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017851.4 |
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| 3UTR-3UTR CAA 90 bp | CCTATTCATCATATGAAGGGACCACCTCCATCCCAACCAGGATCCCAAGCAGAACTACAAAGCATTTACTaGGGTGACATATCTGACAAA | + |
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Preference number: 3 (lower is better) Translates to: PIHHMKGPPPSQPGSQAELQSIY*GDISDK Trigger: TTTGTCAGATATGTCACCCAAGTAAATGCTTTGTAG...TTCTGCTTGGGATCCTGGTTGGGATGGAGGTGGTCCCTTCATATGATGAATAGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017851.4 |
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| 3UTR TCA 72 bp | GTAAAGGAACTCAATAATAGCCTTCTCTCAGCTGTATaGGCAGCTGCATTTCTGGGGACTGACCTAAATACA | + |
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Preference number: 3 (lower is better) Translates to: VKELNNSLLSAV*AAAFLGTDLNT Trigger: TGTATTTAGGTCAGTCCCCAGAAATGCAGCTGCTCATACAGCTGAGAGAAGGCTATTATTGAGTTCCTTTAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017851.4 |
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| 3UTR TCA 72 bp | CAATTATCTGCTTCACAAATCCTTTGTAGTTTGCTTTaGCACATGATCCTAAAGGACAGTAGTTCCAACAAC | + |
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Preference number: 3 (lower is better) Translates to: QLSASQILCSLL*HMILKDSSSNN Trigger: GTTGTTGGAACTACTGTCCTTTAGGATCATGTGTCAAAGCAAACTACAAAGGATTTGTGAAGCAGATAATTG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017851.4 |
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| 3UTR GCA 72 bp | ACTAGTCAAATCTTAAGTGTTAGAAGAGGAGCATTTTaGCTGAAATGTCAGATTGATTTGGGACTCTCTAAA | + |
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Preference number: 3 (lower is better) Translates to: TSQILSVRRGAF*LKCQIDLGLSK Trigger: TTTAGAGAGTCCCAAATCAATCTGACATTTCAGGCAAAATGCTCCTCTTCTAACACTTAAGATTTGACTAGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017851.4 |
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| CDS-3UTR CCA 90 bp | GCTGGTCCGCTCATTTTCCTTAGATGGAAGAATGTCTGTCTTGTCTTCACCCCAGGCACGGGACCCAGCTaGCGAGGGAGAAGACGCCGA | + |
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Preference number: 4 (lower is better) Translates to: AGPLIFLRWKNVCLVFTPGTGPS*RGRRRR Trigger: TCGGCGTCTTCTCCCTCGCCAGCTGGGTCCCGTGCC...TGGGGTGAAGACAAGACAGACATTCTTCCATCTAAGGAAAATGAGCGGACCAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017851.4 |
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| CDS-3UTR TCA 90 bp | CCTATTCATCATATGAAGGGACCACCTCCATCCCAACCAGGATCCCAAGCAGAAAAAGTGCCCACTCTGTaGCGGCGGAGCATAGGCAGG | + |
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Preference number: 4 (lower is better) Translates to: PIHHMKGPPPSQPGSQAEKVPTL*RRSIGR Trigger: CCTGCCTATGCTCCGCCGTCACAGAGTGGGCACTTT...TTCTGCTTGGGATCCTGGTTGGGATGGAGGTGGTCCCTTCATATGATGAATAGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000017851.4 |
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| CDS-3UTR GCA 90 bp | TGCATGAGGCCCAGGCAGAGTGCTCAAGGTCACAAGCACAGCATGTACTCAGTGAGACCTTGTTTTCTGTaGAGTCGTCAGGCTTGGTGT | + |
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Preference number: 4 (lower is better) Translates to: CMRPRQSAQGHKHSMYSVRPCFL*SRQAWC Trigger: ACACCAAGCCTGACGACTGCACAGAAAACAAGGTCT...CACTGAGTACATGCTGTGCTTGTGACCTTGAGCACTCTGCCTGGGCCTCATGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017851.4 |
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| CDS-3UTR CCA 90 bp | TCCCAAACCTATTCATCATATGAAGGGACCACCTCCATCCCAACCAGGATCCCAGTCTACAGCCCTCCGTaGCTGTCCATCCTCTTCATC | + |
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Preference number: 4 (lower is better) Translates to: SQTYSSYEGTTSIPTRIPVYSPP*LSILFI Trigger: GATGAAGAGGATGGACAGCCACGGAGGGCTGTAGAC...TGGGATCCTGGTTGGGATGGAGGTGGTCCCTTCATATGATGAATAGGTTTGGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017851.4 |
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| CDS-3UTR TCA 90 bp | CCTATTCATCATATGAAGGGACCACCTCCATCCCAACCAGGATCCCAAGCAGAAAGCTGGAGCCCATTTTaGACCACACAGCTAGCCACT | + |
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Preference number: 4 (lower is better) Translates to: PIHHMKGPPPSQPGSQAESWSPF*TTQLAT Trigger: AGTGGCTAGCTGTGTGGTTCAAAATGGGCTCCAGCT...TTCTGCTTGGGATCCTGGTTGGGATGGAGGTGGTCCCTTCATATGATGAATAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017851.4 |
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| CDS-3UTR CCA 90 bp | TGCATGAGGCCCAGGCAGAGTGCTCAAGGTCACAAGCACAGCATGTACTCAGTGACCAAGAGCACCAGCTaGATGATAATGAAGAAAGAG | + |
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Preference number: 4 (lower is better) Translates to: CMRPRQSAQGHKHSMYSVTKSTS*MIMKKE Trigger: CTCTTTCTTCATTATCATCCAGCTGGTGCTCTTGGT...CACTGAGTACATGCTGTGCTTGTGACCTTGAGCACTCTGCCTGGGCCTCATGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017851.4 |
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| 3UTR CAA 72 bp | GTCCGCTCATTTTCCTTAGATGGAAGAATGTCTGTCTaGTCTTCACCCCAACAGGGCCTAGTGCAGAACCGA | + |
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Preference number: 4 (lower is better) Translates to: VRSFSLDGRMSV*SSPQQGLVQNR Trigger: TCGGTTCTGCACTAGGCCCTGTTGGGGTGAAGACAAGACAGACATTCTTCCATCTAAGGAAAATGAGCGGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017851.4 |
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| CDS-3UTR TCA 90 bp | TCCCAAACCTATTCATCATATGAAGGGACCACCTCCATCCCAACCAGGATCCCACAGTGGAATTCTTACTaGTGGGACAGCAACTGCACA | + |
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Preference number: 4 (lower is better) Translates to: SQTYSSYEGTTSIPTRIPQWNSY*WDSNCT Trigger: TGTGCAGTTGCTGTCCCATCAGTAAGAATTCCACTG...TGGGATCCTGGTTGGGATGGAGGTGGTCCCTTCATATGATGAATAGGTTTGGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017851.4 |
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| CDS-3UTR TCA 90 bp | AAGGGACCACCTCCATCCCAACCAGGATCCCAAGCAGAACCTATGTACACAGATAGGAGCAAGAGTAGTTaGATTTGCAGGAGACACAGT | + |
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Preference number: 4 (lower is better) Translates to: KGPPPSQPGSQAEPMYTDRSKSS*ICRRHS Trigger: ACTGTGTCTCCTGCAAATTCAACTACTCTTGCTCCT...ATCTGTGTACATAGGTTCTGCTTGGGATCCTGGTTGGGATGGAGGTGGTCCCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017851.4 |
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| CDS-3UTR TCA 90 bp | TCCCAAACCTATTCATCATATGAAGGGACCACCTCCATCCCAACCAGGATCCCATGGTTATGGTCATCATaGTGTACAAGGAGGCACAGC | + |
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Preference number: 4 (lower is better) Translates to: SQTYSSYEGTTSIPTRIPWLWSS*CTRRHS Trigger: GCTGTGCCTCCTTGTACATCATGATGACCATAACCA...TGGGATCCTGGTTGGGATGGAGGTGGTCCCTTCATATGATGAATAGGTTTGGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017851.4 |
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| CDS-3UTR GCA 90 bp | CCTATTCATCATATGAAGGGACCACCTCCATCCCAACCAGGATCCCAAGCAGAATCCAAATTCATAAAGTaGCCACTCTGTGACGGCGGA | + |
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Preference number: 4 (lower is better) Translates to: PIHHMKGPPPSQPGSQAESKFIK*PLCDGG Trigger: TCCGCCGTCACAGAGTGGGCACTTTATGAATTTGGA...TTCTGCTTGGGATCCTGGTTGGGATGGAGGTGGTCCCTTCATATGATGAATAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017851.4 |
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| CDS-3UTR CCA 90 bp | ACCACCTCCATCCCAACCAGGATCCCAAGCAGAACCTATGTACACAGATTAAACGCGCAGCAAAGACGATaGAGAGGATGTAAAAGAGGC | + |
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Preference number: 4 (lower is better) Translates to: TTSIPTRIPSRTYVHRLNAQQRR*RGCKRG Trigger: GCCTCTTTTACATCCTCTCCATCGTCTTTGCTGCGC...GTTTAATCTGTGTACATAGGTTCTGCTTGGGATCCTGGTTGGGATGGAGGTGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017851.4 |
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| CDS-3UTR TCA 90 bp | TCCCAAACCTATTCATCATATGAAGGGACCACCTCCATCCCAACCAGGATCCCAAATTCATTCCAAGAGTaGGCCATGTCTACCAAGAGC | + |
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Preference number: 4 (lower is better) Translates to: SQTYSSYEGTTSIPTRIPNSFQE*AMSTKS Trigger: GCTCTTGGTAGACATGGCTCACTCTTGGAATGAATT...TGGGATCCTGGTTGGGATGGAGGTGGTCCCTTCATATGATGAATAGGTTTGGGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017851.4 |
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| CDS-3UTR TCA 90 bp | GCTGGTCCGCTCATTTTCCTTAGATGGAAGAATGTCTGTCTTGTCTTCACCCCAGGAATCTTCTTCAGTTaGGTTTGTATGCCTTCTGTC | + |
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Preference number: 4 (lower is better) Translates to: AGPLIFLRWKNVCLVFTPGIFFS*VCMPSV Trigger: GACAGAAGGCATACAAACTCAACTGAAGAAGATTCC...TGGGGTGAAGACAAGACAGACATTCTTCCATCTAAGGAAAATGAGCGGACCAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017851.4 |
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| CDS-3UTR TCA 90 bp | TCTGACTCCCAAACCTATTCATCATATGAAGGGACCACCTCCATCCCAACCAGGTCAACCATCTTGATTTaGAATCCTCCTTCACAGAAT | + |
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Preference number: 4 (lower is better) Translates to: SDSQTYSSYEGTTSIPTRSTILI*NPPSQN Trigger: ATTCTGTGAAGGAGGATTTCAAATCAAGATGGTTGA...CCTGGTTGGGATGGAGGTGGTCCCTTCATATGATGAATAGGTTTGGGAGTCAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017851.4 |
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| CDS-3UTR CCA 90 bp | GCATTCCAAGCAAGTCTGGGTTATGTGGAAAAGACCCTTTCTAAACAAATACACTGCAGTCGTCAGGCTTaGTGTAGAAGACGTAGAGCA | + |
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Preference number: 4 (lower is better) Translates to: AFQASLGYVEKTLSKQIHCSRQA*CRRRRA Trigger: TGCTCTACGTCTTCTACACCAAGCCTGACGACTGCA...GTGTATTTGTTTAGAAAGGGTCTTTTCCACATAACCCAGACTTGCTTGGAATGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017851.4 |
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| CDS-3UTR CCA 90 bp | AGTGCAGAACCGATACTAGTTTCTCTTGAAAAGCCTGTTTTATCATACCTCCTTAGCATACCAGAGCCTTaGGTTTCCTTCCTCCATTCG | + |
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Preference number: 4 (lower is better) Translates to: SAEPILVSLEKPVLSYLLSIPEP*VSFLHS Trigger: CGAATGGAGGAAGGAAACCCAAGGCTCTGGTATGCT...AAGGAGGTATGATAAAACAGGCTTTTCAAGAGAAACTAGTATCGGTTCTGCACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017851.4 |
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| CDS-3UTR CCA 90 bp | AGTGCAGAACCGATACTAGTTTCTCTTGAAAAGCCTGTTTTATCATACCTCCTTTTGCTGGATACCTTCTaGAATTTGGCATCAGGGCTG | + |
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Preference number: 4 (lower is better) Translates to: SAEPILVSLEKPVLSYLLLLDTF*NLASGL Trigger: CAGCCCTGATGCCAAATTCCAGAAGGTATCCAGCAA...AAGGAGGTATGATAAAACAGGCTTTTCAAGAGAAACTAGTATCGGTTCTGCACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000017851.4 |
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| CDS-3UTR CCA 90 bp | AGTGCAGAACCGATACTAGTTTCTCTTGAAAAGCCTGTTTTATCATACCTCCTTCAGCTAGCCACTTGCTaGATACCTTCTGGAATTTGG | + |
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Preference number: 4 (lower is better) Translates to: SAEPILVSLEKPVLSYLLQLATC*IPSGIW Trigger: CCAAATTCCAGAAGGTATCCAGCAAGTGGCTAGCTG...AAGGAGGTATGATAAAACAGGCTTTTCAAGAGAAACTAGTATCGGTTCTGCACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017851.4 |
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| CDS-3UTR GCA 90 bp | GCATTCCAAGCAAGTCTGGGTTATGTGGAAAAGACCCTTTCTAAACAAATACACGTCACAATCTTTCTCTaGCTTTGTATCAACCATCTT | + |
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Preference number: 4 (lower is better) Translates to: AFQASLGYVEKTLSKQIHVTIFL*LCINHL Trigger: AAGATGGTTGATACAAAGGCAGAGAAAGATTGTGAC...GTGTATTTGTTTAGAAAGGGTCTTTTCCACATAACCCAGACTTGCTTGGAATGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017851.4 |
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| 3UTR CAA 72 bp | GAAATTTATGGTTCCCCTACTGTTAAAAACAGGTATTaGTCTCACACAGTTAAGCTTAAGGGCCACAATTAT | + |
|
Preference number: 4 (lower is better) Translates to: EIYGSPTVKNRY*SHTVKLKGHNY Trigger: ATAATTGTGGCCCTTAAGCTTAACTGTGTGAGACAAATACCTGTTTTTAACAGTAGGGGAACCATAAATTTC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000017851.4 |
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| CDS-3UTR CAA 90 bp | TGCATGAGGCCCAGGCAGAGTGCTCAAGGTCACAAGCACAGCATGTACTCAGTGGACCGCTCAGGTTCATaGGTCATGGCTGACCACGTG | + |
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Preference number: 5 (lower is better) Translates to: CMRPRQSAQGHKHSMYSVDRSGS*VMADHV Trigger: CACGTGGTCAGCCATGACCAATGAACCTGAGCGGTC...CACTGAGTACATGCTGTGCTTGTGACCTTGAGCACTCTGCCTGGGCCTCATGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017851.4 |
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| CDS TCA 90 bp | TACAGTGGAATTCTTACTGATGGGACAGCAACTGCACAGCAGACATaGTGCACCACTACAGAGGCACGGGACCCAGCTGGCGAGGGAGAA | + |
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Preference number: 5 (lower is better) Translates to: YSGILTDGTATAQQT*CTTTEARDPAGEGE Trigger: TTCTCCCTCGCCAGCTGGGTCCCGTGCCTCTGTAGTGGTGCATCATGTCTGCTGTGCAGTTGCTGTCCCATCAGTAAGAATTCCACTGTA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017851.4 |
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| CDS TCA 90 bp | CATAAGGGAGGGATTGCAGGACCGCTCAGGTTCATTGGTCATGGCTaGCCACGTGAGGTAAAGGGTGTACAGAGTGATGATGGAGGACTG | + |
|
Preference number: 5 (lower is better) Translates to: HKGGIAGPLRFIGHG*PREVKGVQSDDGGL Trigger: CAGTCCTCCATCATCACTCTGTACACCCTTTACCTCACGTGGTCAGCCATGACCAATGAACCTGAGCGGTCCTGCAATCCCTCCCTTATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017851.4 |
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| CDS CCA 90 bp | GTAGCTATACTGCACCCCCTCCTTCTCATTGTCTACAGCCCTCCGTaGCTGTCCATCCTCTTCATCATTGGCTCCATTGGTGGTATCACC | + |
|
Preference number: 5 (lower is better) Translates to: VAILHPLLLIVYSPP*LSILFIIGSIGGIT Trigger: GGTGATACCACCAATGGAGCCAATGATGAAGAGGATGGACAGCCACGGAGGGCTGTAGACAATGAGAAGGAGGGGGTGCAGTATAGCTAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000017851.4 |
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| CDS-3UTR CAA 90 bp | CCTATTCATCATATGAAGGGACCACCTCCATCCCAACCAGGATCCCAAGCAGAACTCATAAGGGAGGGATaGCAGGACCGCTCAGGTTCA | + |
|
Preference number: 5 (lower is better) Translates to: PIHHMKGPPPSQPGSQAELIREG*QDRSGS Trigger: TGAACCTGAGCGGTCCTGCAATCCCTCCCTTATGAG...TTCTGCTTGGGATCCTGGTTGGGATGGAGGTGGTCCCTTCATATGATGAATAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017851.4 |
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| CDS-3UTR CAA 90 bp | CCTATTCATCATATGAAGGGACCACCTCCATCCCAACCAGGATCCCAAGCAGAACAGCTGGAGCCCATTTaGAACCACACAGCTAGCCAC | + |
|
Preference number: 5 (lower is better) Translates to: PIHHMKGPPPSQPGSQAEQLEPI*NHTASH Trigger: GTGGCTAGCTGTGTGGTTCAAAATGGGCTCCAGCTG...TTCTGCTTGGGATCCTGGTTGGGATGGAGGTGGTCCCTTCATATGATGAATAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017851.4 |
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| CDS-3UTR CAA 90 bp | TCTGACTCCCAAACCTATTCATCATATGAAGGGACCACCTCCATCCCAACCAGGCAGCATACCAGAGCCTaGGGTTTCCTTCCTCCATTC | + |
|
Preference number: 5 (lower is better) Translates to: SDSQTYSSYEGTTSIPTRQHTRA*GFLPPF Trigger: GAATGGAGGAAGGAAACCCAAGGCTCTGGTATGCTG...CCTGGTTGGGATGGAGGTGGTCCCTTCATATGATGAATAGGTTTGGGAGTCAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017851.4 |
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| CDS-3UTR CAA 90 bp | TCTGACTCCCAAACCTATTCATCATATGAAGGGACCACCTCCATCCCAACCAGGCCAGAGAGGGTCAGCTaGTTAACTTGGCTGTTGCTC | + |
|
Preference number: 5 (lower is better) Translates to: SDSQTYSSYEGTTSIPTRPERVS*LTWLLL Trigger: GAGCAACAGCCAAGTTAACAAGCTGACCCTCTCTGG...CCTGGTTGGGATGGAGGTGGTCCCTTCATATGATGAATAGGTTTGGGAGTCAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017851.4 |
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| CDS-3UTR CAA 90 bp | TCCCAAACCTATTCATCATATGAAGGGACCACCTCCATCCCAACCAGGATCCCAGATACCTTCTGGAATTaGGCATCAGGGCTGTACCAG | + |
|
Preference number: 5 (lower is better) Translates to: SQTYSSYEGTTSIPTRIPDTFWN*ASGLYQ Trigger: CTGGTACAGCCCTGATGCCAAATTCCAGAAGGTATC...TGGGATCCTGGTTGGGATGGAGGTGGTCCCTTCATATGATGAATAGGTTTGGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017851.4 |
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| CDS-3UTR CAA 90 bp | TCCCAAACCTATTCATCATATGAAGGGACCACCTCCATCCCAACCAGGATCCCAAGGCTGATGAAGACCTaGTTTTCTGTGCAGTCGTCA | + |
|
Preference number: 5 (lower is better) Translates to: SQTYSSYEGTTSIPTRIPRLMKT*FSVQSS Trigger: TGACGACTGCACAGAAAACAAGGTCTTCATCAGCCT...TGGGATCCTGGTTGGGATGGAGGTGGTCCCTTCATATGATGAATAGGTTTGGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017851.4 |
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| CDS-3UTR CAA 90 bp | ACCACCTCCATCCCAACCAGGATCCCAAGCAGAACCTATGTACACAGATTAAACCACACAGCTAGCCACTaGCTGGATACCTTCTGGAAT | + |
|
Preference number: 5 (lower is better) Translates to: TTSIPTRIPSRTYVHRLNHTASH*LDTFWN Trigger: ATTCCAGAAGGTATCCAGCAAGTGGCTAGCTGTGTG...GTTTAATCTGTGTACATAGGTTCTGCTTGGGATCCTGGTTGGGATGGAGGTGGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017851.4 |
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| CDS-3UTR CAA 90 bp | TCTGACTCCCAAACCTATTCATCATATGAAGGGACCACCTCCATCCCAACCAGGATAATGGCAGCGATTTaGAAGAACCAAAACCCGTTG | + |
|
Preference number: 5 (lower is better) Translates to: SDSQTYSSYEGTTSIPTRIMAAI*KNQNPL Trigger: CAACGGGTTTTGGTTCTTCAAAATCGCTGCCATTAT...CCTGGTTGGGATGGAGGTGGTCCCTTCATATGATGAATAGGTTTGGGAGTCAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017851.4 |
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| CDS CCA 90 bp | CCAAGGATAACACTGTCACTCCCAGAGAGGGTCAGCTTGTTAACTTaGCTGTTGCTCGAAGTACGGAAGCTAGAATATATAAGGCAGAAA | + |
|
Preference number: 5 (lower is better) Translates to: PRITLSLPERVSLLT*LLLEVRKLEYIRQK Trigger: TTTCTGCCTTATATATTCTAGCTTCCGTACTTCGAGCAACAGCCAAGTTAACAAGCTGACCCTCTCTGGGAGTGACAGTGTTATCCTTGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017851.4 |
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| CDS TCA 72 bp | ATTCTTACTGATGGGACAGCAACTGCACAGCAGACATaGTGCACCACTACAGAGGCACGGGACCCAGCTGGC | + |
|
Preference number: 6 (lower is better) Translates to: ILTDGTATAQQT*CTTTEARDPAG Trigger: GCCAGCTGGGTCCCGTGCCTCTGTAGTGGTGCATCATGTCTGCTGTGCAGTTGCTGTCCCATCAGTAAGAAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017851.4 |
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| CDS CCA 72 bp | CTGCACCCCCTCCTTCTCATTGTCTACAGCCCTCCGTaGCTGTCCATCCTCTTCATCATTGGCTCCATTGGT | + |
|
Preference number: 6 (lower is better) Translates to: LHPLLLIVYSPP*LSILFIIGSIG Trigger: ACCAATGGAGCCAATGATGAAGAGGATGGACAGCCACGGAGGGCTGTAGACAATGAGAAGGAGGGGGTGCAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000017851.4 |
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| CDS CAA 90 bp | AGGCACAACCAGCTGGAGCCCATTTTGAACCACACAGCTAGCCACTaGCTGGATACCTTCTGGAATTTGGCATCAGGGCTGTACCAGCTG | + |
|
Preference number: 6 (lower is better) Translates to: RHNQLEPILNHTASH*LDTFWNLASGLYQL Trigger: CAGCTGGTACAGCCCTGATGCCAAATTCCAGAAGGTATCCAGCAAGTGGCTAGCTGTGTGGTTCAAAATGGGCTCCAGCTGGTTGTGCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017851.4 |
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| CDS TCA 72 bp | GGGATTGCAGGACCGCTCAGGTTCATTGGTCATGGCTaGCCACGTGAGGTAAAGGGTGTACAGAGTGATGAT | + |
|
Preference number: 6 (lower is better) Translates to: GIAGPLRFIGHG*PREVKGVQSDD Trigger: ATCATCACTCTGTACACCCTTTACCTCACGTGGTCAGCCATGACCAATGAACCTGAGCGGTCCTGCAATCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017851.4 |
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| CDS CAA 72 bp | CAGCTGGAGCCCATTTTGAACCACACAGCTAGCCACTaGCTGGATACCTTCTGGAATTTGGCATCAGGGCTG | + |
|
Preference number: 6 (lower is better) Translates to: QLEPILNHTASH*LDTFWNLASGL Trigger: CAGCCCTGATGCCAAATTCCAGAAGGTATCCAGCAAGTGGCTAGCTGTGTGGTTCAAAATGGGCTCCAGCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017851.4 |
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| CDS CAA 90 bp | ACAGTTGGTGAAGTTAAGTGTGTGATGATGCTCATAAGGGAGGGATaGCAGGACCGCTCAGGTTCATTGGTCATGGCTGACCACGTGAGG | + |
|
Preference number: 6 (lower is better) Translates to: TVGEVKCVMMLIREG*QDRSGSLVMADHVR Trigger: CCTCACGTGGTCAGCCATGACCAATGAACCTGAGCGGTCCTGCAATCCCTCCCTTATGAGCATCATCACACACTTAACTTCACCAACTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017851.4 |
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| CDS TCA 72 bp | TGGCATCAGGGCTGTACCAGCTGGTTATGGTCATCATaGTGTACAAGGAGGCACAGCAGAGCATCAAGTGGA | + |
|
Preference number: 6 (lower is better) Translates to: WHQGCTSWLWSS*CTRRHSRASSG Trigger: TCCACTTGATGCTCTGCTGTGCCTCCTTGTACATCATGATGACCATAACCAGCTGGTACAGCCCTGATGCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017851.4 |
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| CDS CAA 72 bp | CTCCGTGGCTGTCCATCCTCTTCATCATTGGCTCCATaGGTGGTATCACCAAGGATAACACTGTCACTCCCA | + |
|
Preference number: 6 (lower is better) Translates to: LRGCPSSSSLAP*VVSPRITLSLP Trigger: TGGGAGTGACAGTGTTATCCTTGGTGATACCACCAATGGAGCCAATGATGAAGAGGATGGACAGCCACGGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017851.4 |
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| CDS CAA 72 bp | TCTACAGCCCTCCGTGGCTGTCCATCCTCTTCATCATaGGCTCCATTGGTGGTATCACCAAGGATAACACTG | + |
|
Preference number: 6 (lower is better) Translates to: STALRGCPSSSS*APLVVSPRITL Trigger: CAGTGTTATCCTTGGTGATACCACCAATGGAGCCAATGATGAAGAGGATGGACAGCCACGGAGGGCTGTAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017851.4 |
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| CDS CAA 72 bp | CACACAGCTAGCCACTTGCTGGATACCTTCTGGAATTaGGCATCAGGGCTGTACCAGCTGGTTATGGTCATC | + |
|
Preference number: 6 (lower is better) Translates to: HTASHLLDTFWN*ASGLYQLVMVI Trigger: GATGACCATAACCAGCTGGTACAGCCCTGATGCCAAATTCCAGAAGGTATCCAGCAAGTGGCTAGCTGTGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017851.4 |
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| CDS CAA 90 bp | TTCTCATTGTCTACAGCCCTCCGTGGCTGTCCATCCTCTTCATCATaGGCTCCATTGGTGGTATCACCAAGGATAACACTGTCACTCCCA | + |
|
Preference number: 6 (lower is better) Translates to: FSLSTALRGCPSSSS*APLVVSPRITLSLP Trigger: TGGGAGTGACAGTGTTATCCTTGGTGATACCACCAATGGAGCCAATGATGAAGAGGATGGACAGCCACGGAGGGCTGTAGACAATGAGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017851.4 |
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| CDS CCA 72 bp | ACACAGCTAGCCACTTGCTGGATACCTTCTGGAATTTaGCATCAGGGCTGTACCAGCTGGTTATGGTCATCA | + |
|
Preference number: 6 (lower is better) Translates to: TQLATCWIPSGI*HQGCTSWLWSS Trigger: TGATGACCATAACCAGCTGGTACAGCCCTGATGCCAAATTCCAGAAGGTATCCAGCAAGTGGCTAGCTGTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017851.4 |
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| CDS CCA 72 bp | TTGAACCACACAGCTAGCCACTTGCTGGATACCTTCTaGAATTTGGCATCAGGGCTGTACCAGCTGGTTATG | + |
|
Preference number: 6 (lower is better) Translates to: LNHTASHLLDTF*NLASGLYQLVM Trigger: CATAACCAGCTGGTACAGCCCTGATGCCAAATTCCAGAAGGTATCCAGCAAGTGGCTAGCTGTGTGGTTCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017851.4 |
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| CDS CAA 72 bp | GAAGTTAAGTGTGTGATGATGCTCATAAGGGAGGGATaGCAGGACCGCTCAGGTTCATTGGTCATGGCTGAC | + |
|
Preference number: 6 (lower is better) Translates to: EVKCVMMLIREG*QDRSGSLVMAD Trigger: GTCAGCCATGACCAATGAACCTGAGCGGTCCTGCAATCCCTCCCTTATGAGCATCATCACACACTTAACTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017851.4 |
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| CDS CAA 72 bp | CCAAGGATAACACTGTCACTCCCAGAGAGGGTCAGCTaGTTAACTTGGCTGTTGCTCGAAGTACGGAAGCTA | + |
|
Preference number: 6 (lower is better) Translates to: PRITLSLPERVS*LTWLLLEVRKL Trigger: TAGCTTCCGTACTTCGAGCAACAGCCAAGTTAACAAGCTGACCCTCTCTGGGAGTGACAGTGTTATCCTTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017851.4 |
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| CDS CAA 72 bp | TCACTCCCAGAGAGGGTCAGCTTGTTAACTTGGCTGTaGCTCGAAGTACGGAAGCTAGAATATATAAGGCAG | + |
|
Preference number: 6 (lower is better) Translates to: SLPERVSLLTWL*LEVRKLEYIRQ Trigger: CTGCCTTATATATTCTAGCTTCCGTACTTCGAGCAACAGCCAAGTTAACAAGCTGACCCTCTCTGGGAGTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017851.4 |
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| CDS CAA 90 bp | ACCAAGGATAACACTGTCACTCCCAGAGAGGGTCAGCTTGTTAACTaGGCTGTTGCTCGAAGTACGGAAGCTAGAATATATAAGGCAGAA | + |
|
Preference number: 6 (lower is better) Translates to: TKDNTVTPREGQLVN*AVARSTEARIYKAE Trigger: TTCTGCCTTATATATTCTAGCTTCCGTACTTCGAGCAACAGCCAAGTTAACAAGCTGACCCTCTCTGGGAGTGACAGTGTTATCCTTGGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017851.4 |
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| CDS CCA 72 bp | ACACTGTCACTCCCAGAGAGGGTCAGCTTGTTAACTTaGCTGTTGCTCGAAGTACGGAAGCTAGAATATATA | + |
|
Preference number: 6 (lower is better) Translates to: TLSLPERVSLLT*LLLEVRKLEYI Trigger: TATATATTCTAGCTTCCGTACTTCGAGCAACAGCCAAGTTAACAAGCTGACCCTCTCTGGGAGTGACAGTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017851.4 |
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| CDS CAA 72 bp | AACACTGTCACTCCCAGAGAGGGTCAGCTTGTTAACTaGGCTGTTGCTCGAAGTACGGAAGCTAGAATATAT | + |
|
Preference number: 6 (lower is better) Translates to: NTVTPREGQLVN*AVARSTEARIY Trigger: ATATATTCTAGCTTCCGTACTTCGAGCAACAGCCAAGTTAACAAGCTGACCCTCTCTGGGAGTGACAGTGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017851.4 |
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| CDS TCA 72 bp | TCCTCCATTCGATTTACCCATAATTCATTCCAAGAGTaGGCCATGTCTACCAAGAGCACCAGCTGGATGATA | + |
|
Preference number: 6 (lower is better) Translates to: SSIRFTHNSFQE*AMSTKSTSWMI Trigger: TATCATCCAGCTGGTGCTCTTGGTAGACATGGCTCACTCTTGGAATGAATTATGGGTAAATCGAATGGAGGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017851.4 |
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| CDS CAA 90 bp | ATAACACTGTCACTCCCAGAGAGGGTCAGCTTGTTAACTTGGCTGTaGCTCGAAGTACGGAAGCTAGAATATATAAGGCAGAAAACAAAG | + |
|
Preference number: 6 (lower is better) Translates to: ITLSLPERVSLLTWL*LEVRKLEYIRQKTK Trigger: CTTTGTTTTCTGCCTTATATATTCTAGCTTCCGTACTTCGAGCAACAGCCAAGTTAACAAGCTGACCCTCTCTGGGAGTGACAGTGTTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017851.4 |
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| CDS CAA 72 bp | AAAGATCCAATCATGATACCAATAATGGCAGCGATTTaGAAGAACCAAAACCCGTTGTGCACTGCTGCTCTG | + |
|
Preference number: 6 (lower is better) Translates to: KDPIMIPIMAAI*KNQNPLCTAAL Trigger: CAGAGCAGCAGTGCACAACGGGTTTTGGTTCTTCAAAATCGCTGCCATTATTGGTATCATGATTGGATCTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017851.4 |
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| CDS TCA 72 bp | AATCCTCCTTCACAGAATCCAGGAATCTTCTTCAGTTaGGTTTGTATGCCTTCTGTCATCATGATGCAAGAC | + |
|
Preference number: 6 (lower is better) Translates to: NPPSQNPGIFFS*VCMPSVIMMQD Trigger: GTCTTGCATCATGATGACAGAAGGCATACAAACTCAACTGAAGAAGATTCCTGGATTCTGTGAAGGAGGATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017851.4 |
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| CDS CAA 90 bp | CAGCACGTCACAATCTTTCTCTGCCTTTGTATCAACCATCTTGATTaGAAATCCTCCTTCACAGAATCCAGGAATCTTCTTCAGTTGAGT | + |
|
Preference number: 6 (lower is better) Translates to: QHVTIFLCLCINHLD*KSSFTESRNLLQLS Trigger: ACTCAACTGAAGAAGATTCCTGGATTCTGTGAAGGAGGATTTCAAATCAAGATGGTTGATACAAAGGCAGAGAAAGATTGTGACGTGCTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017851.4 |
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| CDS CAA 72 bp | TCCTTCACAGAATCCAGGAATCTTCTTCAGTTGAGTTaGTATGCCTTCTGTCATCATGATGCAAGACACAAT | + |
|
Preference number: 6 (lower is better) Translates to: SFTESRNLLQLS*YAFCHHDARHN Trigger: ATTGTGTCTTGCATCATGATGACAGAAGGCATACAAACTCAACTGAAGAAGATTCCTGGATTCTGTGAAGGA 40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017851.4 |
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| CDS CAA 72 bp | AAATCCTCCTTCACAGAATCCAGGAATCTTCTTCAGTaGAGTTTGTATGCCTTCTGTCATCATGATGCAAGA | + |
|
Preference number: 6 (lower is better) Translates to: KSSFTESRNLLQ*SLYAFCHHDAR Trigger: TCTTGCATCATGATGACAGAAGGCATACAAACTCAACTGAAGAAGATTCCTGGATTCTGTGAAGGAGGATTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017851.4 |
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| CDS CAA 90 bp | CTTGATTTGAAATCCTCCTTCACAGAATCCAGGAATCTTCTTCAGTaGAGTTTGTATGCCTTCTGTCATCATGATGCAAGACACAATAGT | + |
|
Preference number: 6 (lower is better) Translates to: LDLKSSFTESRNLLQ*SLYAFCHHDARHNS Trigger: ACTATTGTGTCTTGCATCATGATGACAGAAGGCATACAAACTCAACTGAAGAAGATTCCTGGATTCTGTGAAGGAGGATTTCAAATCAAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017851.4 |
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