Pregenerated sensors for SERGEF (Mus musculus)
Ensembl gene IDs: ENSMUSG00000030839Ensembl transcript IDs: ENSMUST00000033127.12, ENSMUST00000135035.2, ENSMUST00000216505.2
Found 118 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CAGGTGACCTTGAGATCCTGGCATGGCACAGGGTGTGCTGGCAGCTaGCATACGGCCAAGGAGTGGCCAGCCCCACAGCCCACGAGGAGG | + |
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Preference number: 1 (lower is better) Translates to: QVTLRSWHGTGCAGS*HTAKEWPAPQPTRR Trigger: CCTCCTCGTGGGCTGTGGGGCTGGCCACTCCTTGGCCGTATGTCAGCTGCCAGCACACCCTGTGCCATGCCAGGATCTCAAGGTCACCTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216505.2 |
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| 3UTR GCA 90 bp | TGGGAGAGGGCAGGTGACCTTGAGATCCTGGCATGGCACAGGGTGTaGTGGCAGCTGACATACGGCCAAGGAGTGGCCAGCCCCACAGCC | + |
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Preference number: 1 (lower is better) Translates to: WERAGDLEILAWHRV*WQLTYGQGVASPTA Trigger: GGCTGTGGGGCTGGCCACTCCTTGGCCGTATGTCAGCTGCCAGCACACCCTGTGCCATGCCAGGATCTCAAGGTCACCTGCCCTCTCCCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216505.2 |
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| 3UTR CCA 90 bp | GAGAGGGCAGGTGACCTTGAGATCCTGGCATGGCACAGGGTGTGCTaGCAGCTGACATACGGCCAAGGAGTGGCCAGCCCCACAGCCCAC | + |
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Preference number: 1 (lower is better) Translates to: ERAGDLEILAWHRVC*QLTYGQGVASPTAH Trigger: GTGGGCTGTGGGGCTGGCCACTCCTTGGCCGTATGTCAGCTGCCAGCACACCCTGTGCCATGCCAGGATCTCAAGGTCACCTGCCCTCTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216505.2 |
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| 3UTR GCA 90 bp | TGCTCTAGCTCTTTCTCTGGCTCCAGCTCTTCTGGTCCCCACTGCTaGCGGCAGCTTCTCTTCCCTGCCGTCCTTGGTTCTCACCCCTGC | + |
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Preference number: 1 (lower is better) Translates to: CSSSFSGSSSSGPHC*RQLLFPAVLGSHPC Trigger: GCAGGGGTGAGAACCAAGGACGGCAGGGAAGAGAAGCTGCCGGCAGCAGTGGGGACCAGAAGAGCTGGAGCCAGAGAAAGAGCTAGAGCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216505.2 |
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| 3UTR CCA 90 bp | CTCTGTGTCATCTGGGAGAGGGCAGGTGACCTTGAGATCCTGGCATaGCACAGGGTGTGCTGGCAGCTGACATACGGCCAAGGAGTGGCC | + |
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Preference number: 1 (lower is better) Translates to: LCVIWERAGDLEILA*HRVCWQLTYGQGVA Trigger: GGCCACTCCTTGGCCGTATGTCAGCTGCCAGCACACCCTGTGCCATGCCAGGATCTCAAGGTCACCTGCCCTCTCCCAGATGACACAGAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216505.2 |
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| 3UTR GCA 90 bp | GTGGCAGAGCCTGCACTGGAGTTGGAGTCCAGACATTGGACTCAGTaGCATCCCCACACATGCCGTGTTCGTTCCAACCCCAGGAGCAGC | + |
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Preference number: 1 (lower is better) Translates to: VAEPALELESRHWTQ*HPHTCRVRSNPRSS Trigger: GCTGCTCCTGGGGTTGGAACGAACACGGCATGTGTGGGGATGGCACTGAGTCCAATGTCTGGACTCCAACTCCAGTGCAGGCTCTGCCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216505.2 |
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| 3UTR GCA 90 bp | CCACAGCCCACGAGGAGGAGTCTTGATGGTGATGGTGGCAGAGCCTaGACTGGAGTTGGAGTCCAGACATTGGACTCAGTGCCATCCCCA | + |
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Preference number: 1 (lower is better) Translates to: PQPTRRSLDGDGGRA*TGVGVQTLDSVPSP Trigger: TGGGGATGGCACTGAGTCCAATGTCTGGACTCCAACTCCAGTGCAGGCTCTGCCACCATCACCATCAAGACTCCTCCTCGTGGGCTGTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216505.2 |
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| 3UTR CCA 90 bp | ATGGTGATGGTGGCAGAGCCTGCACTGGAGTTGGAGTCCAGACATTaGACTCAGTGCCATCCCCACACATGCCGTGTTCGTTCCAACCCC | + |
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Preference number: 1 (lower is better) Translates to: MVMVAEPALELESRH*TQCHPHTCRVRSNP Trigger: GGGGTTGGAACGAACACGGCATGTGTGGGGATGGCACTGAGTCCAATGTCTGGACTCCAACTCCAGTGCAGGCTCTGCCACCATCACCAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216505.2 |
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| 3UTR CCA 90 bp | GTCTCTGTCCACGGCACCCTGAGATTCAGTGTTCTCTGTGTCATCTaGGAGAGGGCAGGTGACCTTGAGATCCTGGCATGGCACAGGGTG | + |
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Preference number: 1 (lower is better) Translates to: VSVHGTLRFSVLCVI*ERAGDLEILAWHRV Trigger: CACCCTGTGCCATGCCAGGATCTCAAGGTCACCTGCCCTCTCCCAGATGACACAGAGAACACTGAATCTCAGGGTGCCGTGGACAGAGAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216505.2 |
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| 3UTR TCA 90 bp | ATGGATGAGGAGGGAAATGGGGTTCTGGCAGAAATGGGGCTGGTTTaGATGGGTCTGCCGGCGACTCTTCTCTTTCCAGGTCCCAGGCTG | + |
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Preference number: 1 (lower is better) Translates to: MDEEGNGVLAEMGLV*MGLPATLLFPGPRL Trigger: CAGCCTGGGACCTGGAAAGAGAAGAGTCGCCGGCAGACCCATTCAAACCAGCCCCATTTCTGCCAGAACCCCATTTCCCTCCTCATCCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216505.2 |
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| 3UTR TCA 90 bp | GCTGGTCAGCTTCCAGCTCTGGTTGCTTGGGCCCTCTCTTGTGGCTaGGTTGTGTGCTTCTTGTATTGTTGGGAGCCGCCCTCACATTTG | + |
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Preference number: 1 (lower is better) Translates to: AGQLPALVAWALSCG*VVCFLYCWEPPSHL Trigger: CAAATGTGAGGGCGGCTCCCAACAATACAAGAAGCACACAACTCAGCCACAAGAGAGGGCCCAAGCAACCAGAGCTGGAAGCTGACCAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216505.2 |
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| 3UTR CCA 90 bp | ATTGTATGGATGAGGAGGGAAATGGGGTTCTGGCAGAAATGGGGCTaGTTTGAATGGGTCTGCCGGCGACTCTTCTCTTTCCAGGTCCCA | + |
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Preference number: 1 (lower is better) Translates to: IVWMRREMGFWQKWG*FEWVCRRLFSFQVP Trigger: TGGGACCTGGAAAGAGAAGAGTCGCCGGCAGACCCATTCAAACCAGCCCCATTTCTGCCAGAACCCCATTTCCCTCCTCATCCATACAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216505.2 |
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| 3UTR CAA 90 bp | ATACGGCCAAGGAGTGGCCAGCCCCACAGCCCACGAGGAGGAGTCTaGATGGTGATGGTGGCAGAGCCTGCACTGGAGTTGGAGTCCAGA | + |
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Preference number: 2 (lower is better) Translates to: IRPRSGQPHSPRGGV*MVMVAEPALELESR Trigger: TCTGGACTCCAACTCCAGTGCAGGCTCTGCCACCATCACCATCAAGACTCCTCCTCGTGGGCTGTGGGGCTGGCCACTCCTTGGCCGTAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216505.2 |
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| 3UTR-3UTR GCA 90 bp | GACCTTGAGATCCTGGCATGGCACAGGGTGTGCTGGCAGCTGACATACGGCCAAGATGGTGGCAGAGCCTaGACTGGAGTTGGAGTCCAG | + |
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Preference number: 2 (lower is better) Translates to: DLEILAWHRVCWQLTYGQDGGRA*TGVGVQ Trigger: CTGGACTCCAACTCCAGTGCAGGCTCTGCCACCATC...TTGGCCGTATGTCAGCTGCCAGCACACCCTGTGCCATGCCAGGATCTCAAGGTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216505.2 |
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| 3UTR CAA 90 bp | GATGGTGATGGTGGCAGAGCCTGCACTGGAGTTGGAGTCCAGACATaGGACTCAGTGCCATCCCCACACATGCCGTGTTCGTTCCAACCC | + |
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Preference number: 2 (lower is better) Translates to: DGDGGRACTGVGVQT*DSVPSPHMPCSFQP Trigger: GGGTTGGAACGAACACGGCATGTGTGGGGATGGCACTGAGTCCAATGTCTGGACTCCAACTCCAGTGCAGGCTCTGCCACCATCACCATC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216505.2 |
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| 3UTR CAA 90 bp | CGAGGAGGAGTCTTGATGGTGATGGTGGCAGAGCCTGCACTGGAGTaGGAGTCCAGACATTGGACTCAGTGCCATCCCCACACATGCCGT | + |
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Preference number: 2 (lower is better) Translates to: RGGVLMVMVAEPALE*ESRHWTQCHPHTCR Trigger: ACGGCATGTGTGGGGATGGCACTGAGTCCAATGTCTGGACTCCAACTCCAGTGCAGGCTCTGCCACCATCACCATCAAGACTCCTCCTCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216505.2 |
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| 3UTR-3UTR TCA 90 bp | GTCCACGGCACCCTGAGATTCAGTGTTCTCTGTGTCATCTGGGAGAGGGCAGGTGAAATGGGGCTGGTTTaGATGGGTCTGCCGGCGACT | + |
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Preference number: 2 (lower is better) Translates to: VHGTLRFSVLCVIWERAGEMGLV*MGLPAT Trigger: AGTCGCCGGCAGACCCATTCAAACCAGCCCCATTTC...ACCTGCCCTCTCCCAGATGACACAGAGAACACTGAATCTCAGGGTGCCGTGGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216505.2 |
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| 3UTR-3UTR GCA 90 bp | TGTGTCATCTGGGAGAGGGCAGGTGACCTTGAGATCCTGGCATGGCACAGGGTGAATACGAGCTCCTGCTaGAAAGCAGGCAGCTTTGCC | + |
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Preference number: 2 (lower is better) Translates to: CVIWERAGDLEILAWHRVNTSSC*KAGSFA Trigger: GGCAAAGCTGCCTGCTTTGCAGCAGGAGCTCGTATT...CACCCTGTGCCATGCCAGGATCTCAAGGTCACCTGCCCTCTCCCAGATGACACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216505.2 |
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| 3UTR-3UTR GCA 90 bp | AGAAATGGGGCTGGTTTGAATGGGTCTGCCGGCGACTCTTCTCTTTCCAGGTCCGCTTCCAGCTCTGGTTaGTTGGGCCCTCTCTTGTGG | + |
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Preference number: 2 (lower is better) Translates to: RNGAGLNGSAGDSSLSRSASSSG*LGPLLW Trigger: CCACAAGAGAGGGCCCAAGCAACCAGAGCTGGAAGC...GGACCTGGAAAGAGAAGAGTCGCCGGCAGACCCATTCAAACCAGCCCCATTTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216505.2 |
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| 3UTR-3UTR TCA 90 bp | CCACAGCAGTTCCTGTGTAAAATACGAGCTCCTGCTGCAAAGCAGGCAGCTTTGTCACCCCTGCGCACATaGCACTGGGGCCAGCAAACA | + |
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Preference number: 2 (lower is better) Translates to: PQQFLCKIRAPAAKQAALSPLRT*HWGQQT Trigger: TGTTTGCTGGCCCCAGTGTCATGTGCGCAGGGGTGA...CAAAGCTGCCTGCTTTGCAGCAGGAGCTCGTATTTTACACAGGAACTGCTGTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000216505.2 |
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| 3UTR CAA 90 bp | GTCAGCTTCCAGCTCTGGTTGCTTGGGCCCTCTCTTGTGGCTGAGTaGTGTGCTTCTTGTATTGTTGGGAGCCGCCCTCACATTTGCCAT | + |
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Preference number: 2 (lower is better) Translates to: VSFQLWLLGPSLVAE*CASCIVGSRPHICH Trigger: ATGGCAAATGTGAGGGCGGCTCCCAACAATACAAGAAGCACACAACTCAGCCACAAGAGAGGGCCCAAGCAACCAGAGCTGGAAGCTGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216505.2 |
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| 3UTR-3UTR GCA 90 bp | GTCCACGGCACCCTGAGATTCAGTGTTCTCTGTGTCATCTGGGAGAGGGCAGGTTCTCTCTTGCGCTCTTaGGCTCTGGCTCCTAAAGAT | + |
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Preference number: 2 (lower is better) Translates to: VHGTLRFSVLCVIWERAGSLLRS*ALAPKD Trigger: ATCTTTAGGAGCCAGAGCGCAAGAGCGCAAGAGAGA...ACCTGCCCTCTCCCAGATGACACAGAGAACACTGAATCTCAGGGTGCCGTGGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216505.2 |
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| 3UTR-3UTR GCA 90 bp | GTCCACGGCACCCTGAGATTCAGTGTTCTCTGTGTCATCTGGGAGAGGGCAGGTTCTTTTTCTCTCTCTTaGGCTCTTGCGCTCTGGCTC | + |
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Preference number: 2 (lower is better) Translates to: VHGTLRFSVLCVIWERAGSFSLS*ALALWL Trigger: GAGCCAGAGCGCAAGAGCGCAAGAGAGAGAAAAAGA...ACCTGCCCTCTCCCAGATGACACAGAGAACACTGAATCTCAGGGTGCCGTGGAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000216505.2 |
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| 3UTR-3UTR CCA 90 bp | GTCCACGGCACCCTGAGATTCAGTGTTCTCTGTGTCATCTGGGAGAGGGCAGGTCCTTCCATCCAGCAATaGCAGCTGCAACAGATTCTC | + |
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Preference number: 2 (lower is better) Translates to: VHGTLRFSVLCVIWERAGPSIQQ*QLQQIL Trigger: GAGAATCTGTTGCAGCTGCCATTGCTGGATGGAAGG...ACCTGCCCTCTCCCAGATGACACAGAGAACACTGAATCTCAGGGTGCCGTGGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216505.2 |
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| 3UTR-3UTR CCA 90 bp | TCCAACCCCAGGAGCAGCACTTGTCCCCTAATGTGCACAATGGTCCCGTGTTTAGTCAGCTTCCAGCTCTaGTTGCTTGGGCCCTCTCTT | + |
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Preference number: 2 (lower is better) Translates to: SNPRSSTCPLMCTMVPCLVSFQL*LLGPSL Trigger: AAGAGAGGGCCCAAGCAACCAGAGCTGGAAGCTGAC...TAAACACGGGACCATTGTGCACATTAGGGGACAAGTGCTGCTCCTGGGGTTGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216505.2 |
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| 3UTR-3UTR CCA 90 bp | ATTGGACTCAGTGCCATCCCCACACATGCCGTGTTCGTTCCAACCCCAGGAGCAAGGGAAATGGGGTTCTaGCAGAAATGGGGCTGGTTT | + |
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Preference number: 2 (lower is better) Translates to: IGLSAIPTHAVFVPTPGAREMGF*QKWGWF Trigger: AAACCAGCCCCATTTCTGCCAGAACCCCATTTCCCT...TGCTCCTGGGGTTGGAACGAACACGGCATGTGTGGGGATGGCACTGAGTCCAAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000216505.2 |
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| 3UTR-3UTR GCA 90 bp | GTCTTGATGGTGATGGTGGCAGAGCCTGCACTGGAGTTGGAGTCCAGACATTGGGAGCTCTTGCTCTCTTaGACTCTGGCTCCTGAAGAT | + |
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Preference number: 2 (lower is better) Translates to: VLMVMVAEPALELESRHWELLLS*TLAPED Trigger: ATCTTCAGGAGCCAGAGTGCAAGAGAGCAAGAGCTC...CCAATGTCTGGACTCCAACTCCAGTGCAGGCTCTGCCACCATCACCATCAAGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216505.2 |
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| 3UTR-3UTR GCA 90 bp | GACCTTGAGATCCTGGCATGGCACAGGGTGTGCTGGCAGCTGACATACGGCCAAAAAGGGACGGGGTTTTaGCATTCTCTCTCTTGCTTT | + |
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Preference number: 2 (lower is better) Translates to: DLEILAWHRVCWQLTYGQKGTGF*HSLSCF Trigger: AAAGCAAGAGAGAGAATGGCAAAACCCCGTCCCTTT...TTGGCCGTATGTCAGCTGCCAGCACACCCTGTGCCATGCCAGGATCTCAAGGTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000216505.2 |
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| 3UTR CAA 90 bp | CAGTTCCTGTGTAAAATACGAGCTCCTGCTGCAAAGCAGGCAGCTTaGCCGATACCTGCTCTAGCTCTTTCTCTGGCTCCAGCTCTTCTG | + |
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Preference number: 2 (lower is better) Translates to: QFLCKIRAPAAKQAA*PIPALALSLAPALL Trigger: CAGAAGAGCTGGAGCCAGAGAAAGAGCTAGAGCAGGTATCGGCAAAGCTGCCTGCTTTGCAGCAGGAGCTCGTATTTTACACAGGAACTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216505.2 |
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| 3UTR-3UTR GCA 90 bp | GCTCCTGAAGATGTAAGCAATAAAGCTTTGCCGCAGAAGATTCCGGTTTGCTGCGCAGCTTCTCTTCCCTaGCGTCCTTGGTTCTCACCC | + |
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Preference number: 2 (lower is better) Translates to: APEDVSNKALPQKIPVCCAASLP*RPWFSP Trigger: GGGTGAGAACCAAGGACGGCAGGGAAGAGAAGCTGC...GCAGCAAACCGGAATCTTCTGCGGCAAAGCTTTATTGCTTACATCTTCAGGAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216505.2 |
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| 3UTR-3UTR CCA 90 bp | AGAAATGGGGCTGGTTTGAATGGGTCTGCCGGCGACTCTTCTCTTTCCAGGTCCTGCTTCTTGTATTGTTaGGAGCCGCCCTCACATTTG | + |
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Preference number: 2 (lower is better) Translates to: RNGAGLNGSAGDSSLSRSCFLYC*EPPSHL Trigger: CAAATGTGAGGGCGGCTCCCAACAATACAAGAAGCA...GGACCTGGAAAGAGAAGAGTCGCCGGCAGACCCATTCAAACCAGCCCCATTTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216505.2 |
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| 3UTR GCA 72 bp | GCAGGTGACCTTGAGATCCTGGCATGGCACAGGGTGTaGTGGCAGCTGACATACGGCCAAGGAGTGGCCAGC | + |
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Preference number: 3 (lower is better) Translates to: AGDLEILAWHRV*WQLTYGQGVAS Trigger: GCTGGCCACTCCTTGGCCGTATGTCAGCTGCCAGCACACCCTGTGCCATGCCAGGATCTCAAGGTCACCTGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216505.2 |
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| 3UTR GCA 72 bp | GTCTGCCGGCGACTCTTCTCTTTCCAGGTCCCAGGCTaGCTCTGCTGGTCAGCTTCCAGCTCTGGTTGCTTG | + |
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Preference number: 3 (lower is better) Translates to: VCRRLFSFQVPG*LCWSASSSGCL Trigger: CAAGCAACCAGAGCTGGAAGCTGACCAGCAGAGGCAGCCTGGGACCTGGAAAGAGAAGAGTCGCCGGCAGAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216505.2 |
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| 3UTR CCA 72 bp | ATCTGGGAGAGGGCAGGTGACCTTGAGATCCTGGCATaGCACAGGGTGTGCTGGCAGCTGACATACGGCCAA | + |
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Preference number: 3 (lower is better) Translates to: IWERAGDLEILA*HRVCWQLTYGQ Trigger: TTGGCCGTATGTCAGCTGCCAGCACACCCTGTGCCATGCCAGGATCTCAAGGTCACCTGCCCTCTCCCAGAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216505.2 |
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| 3UTR-3UTR CAA 90 bp | GTCCACGGCACCCTGAGATTCAGTGTTCTCTGTGTCATCTGGGAGAGGGCAGGTAGAAATGGGGCTGGTTaGAATGGGTCTGCCGGCGAC | + |
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Preference number: 3 (lower is better) Translates to: VHGTLRFSVLCVIWERAGRNGAG*NGSAGD Trigger: GTCGCCGGCAGACCCATTCAAACCAGCCCCATTTCT...ACCTGCCCTCTCCCAGATGACACAGAGAACACTGAATCTCAGGGTGCCGTGGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216505.2 |
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| 3UTR CCA 72 bp | GTGGCAGAGCCTGCACTGGAGTTGGAGTCCAGACATTaGACTCAGTGCCATCCCCACACATGCCGTGTTCGT | + |
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Preference number: 3 (lower is better) Translates to: VAEPALELESRH*TQCHPHTCRVR Trigger: ACGAACACGGCATGTGTGGGGATGGCACTGAGTCCAATGTCTGGACTCCAACTCCAGTGCAGGCTCTGCCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216505.2 |
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| 3UTR TCA 72 bp | CTTCCAGCTCTGGTTGCTTGGGCCCTCTCTTGTGGCTaGGTTGTGTGCTTCTTGTATTGTTGGGAGCCGCCC | + |
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Preference number: 3 (lower is better) Translates to: LPALVAWALSCG*VVCFLYCWEPP Trigger: GGGCGGCTCCCAACAATACAAGAAGCACACAACTCAGCCACAAGAGAGGGCCCAAGCAACCAGAGCTGGAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216505.2 |
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| 3UTR GCA 72 bp | GAGTCCAGACATTGGACTCAGTGCCATCCCCACACATaGCGTGTTCGTTCCAACCCCAGGAGCAGCACTTGT | + |
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Preference number: 3 (lower is better) Translates to: ESRHWTQCHPHT*RVRSNPRSSTC Trigger: ACAAGTGCTGCTCCTGGGGTTGGAACGAACACGGCATGTGTGGGGATGGCACTGAGTCCAATGTCTGGACTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216505.2 |
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| 3UTR CCA 72 bp | GAAATGGGGTTCTGGCAGAAATGGGGCTGGTTTGAATaGGTCTGCCGGCGACTCTTCTCTTTCCAGGTCCCA | + |
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Preference number: 3 (lower is better) Translates to: EMGFWQKWGWFE*VCRRLFSFQVP Trigger: TGGGACCTGGAAAGAGAAGAGTCGCCGGCAGACCCATTCAAACCAGCCCCATTTCTGCCAGAACCCCATTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216505.2 |
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| 3UTR-3UTR CAA 90 bp | CACACATGCCGTGTTCGTTCCAACCCCAGGAGCAGCACTTGTCCCCTAATGTGCTTGCCATTCTCTCTCTaGCTTTCTTGTTCTTGTTCT | + |
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Preference number: 3 (lower is better) Translates to: HTCRVRSNPRSSTCPLMCLPFSL*LSCSCS Trigger: AGAACAAGAACAAGAAAGCAAGAGAGAGAATGGCAA...GCACATTAGGGGACAAGTGCTGCTCCTGGGGTTGGAACGAACACGGCATGTGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216505.2 |
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| CDS-3UTR GCA 90 bp | TGCTGGTCAGCTTCCAGCTCTGGTTGCTTGGGCCCTCTCTTGTGGCTGAGTTGTGCGCGGGAGGCCAGCTaGCCATGCTTGTTACGGCCC | + |
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Preference number: 4 (lower is better) Translates to: CWSASSSGCLGPLLWLSCAREAS*PCLLRP Trigger: GGGCCGTAACAAGCATGGGCAGCTGGCCTCCCGCGC...ACAACTCAGCCACAAGAGAGGGCCCAAGCAACCAGAGCTGGAAGCTGACCAGCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216505.2 |
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| CDS-3UTR GCA 90 bp | TTCTCTGGCTCCAGCTCTTCTGGTCCCCACTGCTGCCGGCAGCTTCTCTTCCCTGAGGGAGGCACAGAGTaGTTCCCTTCCAGAAGCCAG | + |
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Preference number: 4 (lower is better) Translates to: FSGSSSSGPHCCRQLLFPEGGTE*FPSRSQ Trigger: CTGGCTTCTGGAAGGGAAGCACTCTGTGCCTCCCTC...AGGGAAGAGAAGCTGCCGGCAGCAGTGGGGACCAGAAGAGCTGGAGCCAGAGAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216505.2 |
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| 3UTR CAA 72 bp | GGTGGCAGAGCCTGCACTGGAGTTGGAGTCCAGACATaGGACTCAGTGCCATCCCCACACATGCCGTGTTCG | + |
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Preference number: 4 (lower is better) Translates to: GGRACTGVGVQT*DSVPSPHMPCS Trigger: CGAACACGGCATGTGTGGGGATGGCACTGAGTCCAATGTCTGGACTCCAACTCCAGTGCAGGCTCTGCCACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216505.2 |
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| CDS-3UTR GCA 90 bp | TGTGTCATCTGGGAGAGGGCAGGTGACCTTGAGATCCTGGCATGGCACAGGGTGTTGCCCATAGCTGTTTaGACCCCAGGCGAAGAGCAC | + |
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Preference number: 4 (lower is better) Translates to: CVIWERAGDLEILAWHRVLPIAV*TPGEEH Trigger: GTGCTCTTCGCCTGGGGTGCAAACAGCTATGGGCAA...CACCCTGTGCCATGCCAGGATCTCAAGGTCACCTGCCCTCTCCCAGATGACACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216505.2 |
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| CDS-3UTR GCA 90 bp | TGGCAGAAATGGGGCTGGTTTGAATGGGTCTGCCGGCGACTCTTCTCTTTCCAGAACAGTGGGAGATTCTaGCCAGGGCACAGGCGTCGA | + |
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Preference number: 4 (lower is better) Translates to: WQKWGWFEWVCRRLFSFQNSGRF*PGHRRR Trigger: TCGACGCCTGTGCCCTGGGCAGAATCTCCCACTGTT...CTGGAAAGAGAAGAGTCGCCGGCAGACCCATTCAAACCAGCCCCATTTCTGCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216505.2 |
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| 3UTR CAA 72 bp | CAGCTCTGGTTGCTTGGGCCCTCTCTTGTGGCTGAGTaGTGTGCTTCTTGTATTGTTGGGAGCCGCCCTCAC | + |
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Preference number: 4 (lower is better) Translates to: QLWLLGPSLVAE*CASCIVGSRPH Trigger: GTGAGGGCGGCTCCCAACAATACAAGAAGCACACAACTCAGCCACAAGAGAGGGCCCAAGCAACCAGAGCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216505.2 |
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| CDS-3UTR TCA 90 bp | GTCTTGATGGTGATGGTGGCAGAGCCTGCACTGGAGTTGGAGTCCAGACATTGGAGAACTTCCTCTGTGTaGCCAAGCCCCAACTGCCCA | + |
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Preference number: 4 (lower is better) Translates to: VLMVMVAEPALELESRHWRTSSV*PSPNCP Trigger: TGGGCAGTTGGGGCTTGGTCACACAGAGGAAGTTCT...CCAATGTCTGGACTCCAACTCCAGTGCAGGCTCTGCCACCATCACCATCAAGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216505.2 |
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| CDS-3UTR GCA 90 bp | CCACAGCAGTTCCTGTGTAAAATACGAGCTCCTGCTGCAAAGCAGGCAGCTTTGGCGTCGACCAGAAGATaGCAAGCCAGTCCCCCACTG | + |
|
Preference number: 4 (lower is better) Translates to: PQQFLCKIRAPAAKQAALASTRR*QASPPL Trigger: CAGTGGGGGACTGGCTTGGCATCTTCTGGTCGACGC...CAAAGCTGCCTGCTTTGCAGCAGGAGCTCGTATTTTACACAGGAACTGCTGTGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000216505.2 |
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| CDS-3UTR GCA 90 bp | AAATGGGGTTCTGGCAGAAATGGGGCTGGTTTGAATGGGTCTGCCGGCGACTCTCCAGGCCTGTCACTCTaGTGGGTTCCTTTGCTGTCA | + |
|
Preference number: 4 (lower is better) Translates to: KWGSGRNGAGLNGSAGDSPGLSL*WVPLLS Trigger: TGACAGCAAAGGAACCCAGCAGAGTGACAGGCCTGG...AGAGTCGCCGGCAGACCCATTCAAACCAGCCCCATTTCTGCCAGAACCCCATTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216505.2 |
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| CDS-3UTR CCA 90 bp | CTGGACCACAGCAGTTCCTGTGTAAAATACGAGCTCCTGCTGCAAAGCAGGCAGAAGCCAGTCCCCCACTaGAACACACTGCCAGTCGCT | + |
|
Preference number: 4 (lower is better) Translates to: LDHSSSCVKYELLLQSRQKPVPH*NTLPVA Trigger: AGCGACTGGCAGTGTGTTCCAGTGGGGGACTGGCTT...CTGCCTGCTTTGCAGCAGGAGCTCGTATTTTACACAGGAACTGCTGTGGTCCAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000216505.2 |
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| CDS-3UTR CCA 90 bp | CTCTTTCTCTGGCTCCAGCTCTTCTGGTCCCCACTGCTGCCGGCAGCTTCTCTTTGCTGTCAAAAACAGTaGGAGATTCTGCCCAGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: LFLWLQLFWSPLLPAASLCCQKQ*EILPRA Trigger: TGCCCTGGGCAGAATCTCCCACTGTTTTTGACAGCA...AAGAGAAGCTGCCGGCAGCAGTGGGGACCAGAAGAGCTGGAGCCAGAGAAAGAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000216505.2 |
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| 3UTR CAA 72 bp | CACATGCCGTGTTCGTTCCAACCCCAGGAGCAGCACTaGTCCCCTAATGTGCACAATGGTCCCGTGTTTAGG | + |
|
Preference number: 4 (lower is better) Translates to: HMPCSFQPQEQH*SPNVHNGPVFR Trigger: CCTAAACACGGGACCATTGTGCACATTAGGGGACAAGTGCTGCTCCTGGGGTTGGAACGAACACGGCATGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216505.2 |
||
| CDS-3UTR TCA 90 bp | CTGGTCTCAGGGGTAACTACCTCCTTCCATCCAGCAATGGCAGCTGCAACAGATCAGGCAATGCAGAGGTaGAGGCACACTGTTCTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: LVSGVTTSFHPAMAAATDQAMQR*RHTVLW Trigger: CCACAGAACAGTGTGCCTTCACCTCTGCATTGCCTG...ATCTGTTGCAGCTGCCATTGCTGGATGGAAGGAGGTAGTTACCCCTGAGACCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216505.2 |
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| CDS-3UTR GCA 90 bp | AGAAATGGGGCTGGTTTGAATGGGTCTGCCGGCGACTCTTCTCTTTCCAGGTCCGTGACAACTGCAGAATaGCCTCCTCCTCCTGTGACA | + |
|
Preference number: 4 (lower is better) Translates to: RNGAGLNGSAGDSSLSRSVTTAE*PPPPVT Trigger: TGTCACAGGAGGAGGAGGGCATTCTGCAGTTGTCAC...GGACCTGGAAAGAGAAGAGTCGCCGGCAGACCCATTCAAACCAGCCCCATTTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216505.2 |
||
| CDS-3UTR TCA 90 bp | GTGTTCTCTGTGTCATCTGGGAGAGGGCAGGTGACCTTGAGATCCTGGCATGGCTTGATACACCCAGCTTaGCAGAAGTCACTCAGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: VFSVSSGRGQVTLRSWHGLIHPA*QKSLSC Trigger: GCAACTGAGTGACTTCTGTCAAGCTGGGTGTATCAA...GCCATGCCAGGATCTCAAGGTCACCTGCCCTCTCCCAGATGACACAGAGAACAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216505.2 |
||
| CDS-3UTR TCA 90 bp | AGAAATGGGGCTGGTTTGAATGGGTCTGCCGGCGACTCTTCTCTTTCCAGGTCCTGCTTAAGGCTCTGCTaGGAGTCAGGTGCTATCCAT | + |
|
Preference number: 4 (lower is better) Translates to: RNGAGLNGSAGDSSLSRSCLRLC*ESGAIH Trigger: ATGGATAGCACCTGACTCTCAGCAGAGCCTTAAGCA...GGACCTGGAAAGAGAAGAGTCGCCGGCAGACCCATTCAAACCAGCCCCATTTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216505.2 |
||
| CDS-3UTR GCA 90 bp | TGCTGGTCAGCTTCCAGCTCTGGTTGCTTGGGCCCTCTCTTGTGGCTGAGTTGTTCTGCTGGGTTCCTTTaGTGTCAAAAACAGTGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: CWSASSSGCLGPLLWLSCSAGFL*CQKQWE Trigger: CTCCCACTGTTTTTGACAGCAAAGGAACCCAGCAGA...ACAACTCAGCCACAAGAGAGGGCCCAAGCAACCAGAGCTGGAAGCTGACCAGCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000216505.2 |
||
| CDS-3UTR GCA 90 bp | TACCTCCTTCCATCCAGCAATGGCAGCTGCAACAGATTCTCTAAAGGGCAGCCTGCTCCTGTCAGGCAATaGAGAGGTGAAGGCACACTG | + |
|
Preference number: 4 (lower is better) Translates to: YLLPSSNGSCNRFSKGQPAPVRQ*RGEGTL Trigger: CAGTGTGCCTTCACCTCTGCATTGCCTGACAGGAGC...AGGCTGCCCTTTAGAGAATCTGTTGCAGCTGCCATTGCTGGATGGAAGGAGGTA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216505.2 |
||
| CDS-3UTR GCA 90 bp | CTCTTTCTCTGGCTCCAGCTCTTCTGGTCCCCACTGCTGCCGGCAGCTTCTCTTACAAGAAATCTCTGTTaGTCCTGTCAGGCAATGCAG | + |
|
Preference number: 4 (lower is better) Translates to: LFLWLQLFWSPLLPAASLTRNLC*SCQAMQ Trigger: CTGCATTGCCTGACAGGAGCAACAGAGATTTCTTGT...AAGAGAAGCTGCCGGCAGCAGTGGGGACCAGAAGAGCTGGAGCCAGAGAAAGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216505.2 |
||
| CDS-3UTR TCA 90 bp | AGCTCTGGTTGCTTGGGCCCTCTCTTGTGGCTGAGTTGTGTGCTTCTTGTATTGGATCTCCTCCATCTGTaGCAACTGCAGAATGCCCTC | + |
|
Preference number: 4 (lower is better) Translates to: SSGCLGPLLWLSCVLLVLDLLHL*QLQNAL Trigger: GAGGGCATTCTGCAGTTGTCACAGATGGAGGAGATC...CAATACAAGAAGCACACAACTCAGCCACAAGAGAGGGCCCAAGCAACCAGAGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216505.2 |
||
| CDS-3UTR TCA 90 bp | TTGCGCTCTTGCGCTCTGGCTCCTAAAGATGTAAGCAATAGAGCTCTTGCTCTCCTATCCATGGTGCTGTaGCTAGGCAGGAAAGGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: LRSCALAPKDVSNRALALLSMVL*LGRKGE Trigger: CTCCCCTTTCCTGCCTAGTCACAGCACCATGGATAG...GAGAGCAAGAGCTCTATTGCTTACATCTTTAGGAGCCAGAGCGCAAGAGCGCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216505.2 |
||
| CDS-3UTR GCA 90 bp | CTGGACCACAGCAGTTCCTGTGTAAAATACGAGCTCCTGCTGCAAAGCAGGCAGTGCAACAGCACACACTaGTGTAGAATTCTCCAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: LDHSSSCVKYELLLQSRQCNSTH*CRILQA Trigger: GGCCTGGAGAATTCTACAGCAGTGTGTGCTGTTGCA...CTGCCTGCTTTGCAGCAGGAGCTCGTATTTTACACAGGAACTGCTGTGGTCCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216505.2 |
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| CDS-3UTR GCA 90 bp | TACCTCCTTCCATCCAGCAATGGCAGCTGCAACAGATTCTCTAAAGGGCAGCCTCTGCTGAGAGTCAGGTaGTATCCATGGTGCTGTGAC | + |
|
Preference number: 4 (lower is better) Translates to: YLLPSSNGSCNRFSKGQPLLRVR*YPWCCD Trigger: GTCACAGCACCATGGATAGCACCTGACTCTCAGCAG...AGGCTGCCCTTTAGAGAATCTGTTGCAGCTGCCATTGCTGGATGGAAGGAGGTA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216505.2 |
||
| CDS-3UTR CCA 90 bp | CTGGTCTCAGGGGTAACTACCTCCTTCCATCCAGCAATGGCAGCTGCAACAGATGGCCTGTCACTCTGCTaGGTTCCTTTGCTGTCAAAA | + |
|
Preference number: 4 (lower is better) Translates to: LVSGVTTSFHPAMAAATDGLSLC*VPLLSK Trigger: TTTTGACAGCAAAGGAACCCAGCAGAGTGACAGGCC...ATCTGTTGCAGCTGCCATTGCTGGATGGAAGGAGGTAGTTACCCCTGAGACCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216505.2 |
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| CDS-3UTR GCA 90 bp | TCCAACCCCAGGAGCAGCACTTGTCCCCTAATGTGCACAATGGTCCCGTGTTTACAGAAGTCACTCAGTTaGTGGGGCAGAAACACATCT | + |
|
Preference number: 4 (lower is better) Translates to: SNPRSSTCPLMCTMVPCLQKSLS*WGRNTS Trigger: AGATGTGTTTCTGCCCCAGCAACTGAGTGACTTCTG...TAAACACGGGACCATTGTGCACATTAGGGGACAAGTGCTGCTCCTGGGGTTGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000216505.2 |
||
| CDS-3UTR GCA 90 bp | TTGCGCTCTTGCGCTCTGGCTCCTAAAGATGTAAGCAATAGAGCTCTTGCTCTCCGAGTGGTCAGATCCTaGAACAGCACACACTGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: LRSCALAPKDVSNRALALRVVRS*NSTHCC Trigger: ACAGCAGTGTGTGCTGTTGCAGGATCTGACCACTCG...GAGAGCAAGAGCTCTATTGCTTACATCTTTAGGAGCCAGAGCGCAAGAGCGCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216505.2 |
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| CDS-3UTR GCA 90 bp | TCTCGTCCTGTCTGGGTTGAGGTCACTGATCGTCTCTCCTTCCAGTCTGTCTCTAGTCAGACTAATTACTaGCAAGTTGTGCTCCGAGCC | + |
|
Preference number: 4 (lower is better) Translates to: SRPVWVEVTDRLSFQSVSSQTNY*QVVLRA Trigger: GGCTCGGAGCACAACTTGGCAGTAATTAGTCTGACT...AGAGACAGACTGGAAGGAGAGACGATCAGTGACCTCAACCCAGACAGGACGAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216505.2 |
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| CDS-3UTR CCA 90 bp | TCCAACCCCAGGAGCAGCACTTGTCCCCTAATGTGCACAATGGTCCCGTGTTTAAAGTCACTCAGTTGCTaGGGCAGAAACACATCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: SNPRSSTCPLMCTMVPCLKSLSC*GRNTSS Trigger: GGAAGATGTGTTTCTGCCCCAGCAACTGAGTGACTT...TAAACACGGGACCATTGTGCACATTAGGGGACAAGTGCTGCTCCTGGGGTTGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216505.2 |
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| CDS-3UTR CCA 90 bp | TCTCGTCCTGTCTGGGTTGAGGTCACTGATCGTCTCTCCTTCCAGTCTGTCTCTACTGGCCAAAGGCATTaGATCCACAGGACAGAACTT | + |
|
Preference number: 4 (lower is better) Translates to: SRPVWVEVTDRLSFQSVSTGQRH*IHRTEL Trigger: AAGTTCTGTCCTGTGGATCCAATGCCTTTGGCCAGT...AGAGACAGACTGGAAGGAGAGACGATCAGTGACCTCAACCCAGACAGGACGAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216505.2 |
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| 3UTR CAA 72 bp | TGTAAAATACGAGCTCCTGCTGCAAAGCAGGCAGCTTaGCCGATACCTGCTCTAGCTCTTTCTCTGGCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: CKIRAPAAKQAA*PIPALALSLAP Trigger: TGGAGCCAGAGAAAGAGCTAGAGCAGGTATCGGCAAAGCTGCCTGCTTTGCAGCAGGAGCTCGTATTTTACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216505.2 |
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| CDS-3UTR TCA 90 bp | CTGGTCTCAGGGGTAACTACCTCCTTCCATCCAGCAATGGCAGCTGCAACAGATCCACAGGACAGAACTTaGCCTTTTTCTGTAAGCATG | + |
|
Preference number: 4 (lower is better) Translates to: LVSGVTTSFHPAMAAATDPQDRT*PFSVSM Trigger: CATGCTTACAGAAAAAGGTCAAGTTCTGTCCTGTGG...ATCTGTTGCAGCTGCCATTGCTGGATGGAAGGAGGTAGTTACCCCTGAGACCAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000216505.2 |
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| CDS-3UTR TCA 90 bp | TACCTCCTTCCATCCAGCAATGGCAGCTGCAACAGATTCTCTAAAGGGCAGCCTCACTCCAGACAGCAGTaGCCTTTTCATCCTGAAAGT | + |
|
Preference number: 4 (lower is better) Translates to: YLLPSSNGSCNRFSKGQPHSRQQ*PFHPES Trigger: ACTTTCAGGATGAAAAGGTCACTGCTGTCTGGAGTG...AGGCTGCCCTTTAGAGAATCTGTTGCAGCTGCCATTGCTGGATGGAAGGAGGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216505.2 |
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| 3UTR CAA 72 bp | TGCACTCTGGCTCCTGAAGATGTAAGCAATAAAGCTTaGCCGCAGAAGATTCCGGTTTGCTGCGTCTTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: CTLAPEDVSNKA*PQKIPVCCVFP Trigger: AGGAAAGACGCAGCAAACCGGAATCTTCTGCGGCAAAGCTTTATTGCTTACATCTTCAGGAGCCAGAGTGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216505.2 |
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| 3UTR CAA 72 bp | CCTCTCTTGTGGCTGAGTTGTGTGCTTCTTGTATTGTaGGGAGCCGCCCTCACATTTGCCATTATAAGATGG | + |
|
Preference number: 4 (lower is better) Translates to: PLLWLSCVLLVL*GAALTFAIIRW Trigger: CCATCTTATAATGGCAAATGTGAGGGCGGCTCCCAACAATACAAGAAGCACACAACTCAGCCACAAGAGAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216505.2 |
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| CDS-3UTR GCA 90 bp | GAAGATGTAAGCAATAAAGCTTTGCCGCAGAAGATTCCGGTTTGCTGCGTCTTTTCCATCTGTGACAACTaGAGAATGCCCTCCTCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: EDVSNKALPQKIPVCCVFSICDN*RMPSSS Trigger: GGAGGAGGAGGGCATTCTGCAGTTGTCACAGATGGA...AAAGACGCAGCAAACCGGAATCTTCTGCGGCAAAGCTTTATTGCTTACATCTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216505.2 |
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| CDS CCA 90 bp | CCAGGGCACAGGCGTCGACCAGAAGATGCCAAGCCAGTCCCCCACTaGAACACACTGCCAGTCGCTGTAGTGGCTAAGGCATGCCTCAGT | + |
|
Preference number: 5 (lower is better) Translates to: PGHRRRPEDAKPVPH*NTLPVAVVAKACLS Trigger: ACTGAGGCATGCCTTAGCCACTACAGCGACTGGCAGTGTGTTCCAGTGGGGGACTGGCTTGGCATCTTCTGGTCGACGCCTGTGCCCTGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033127.12 ENSMUST00000216505.2 |
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| CDS TCA 90 bp | CGCTGGAAAGAAGCCTTCCATCCTCCAAGCAAAAGGCAGGTTCGATaGCACAGGTGGCCCCAGGAGCTCTGGGACCGAGATCTCTCTGCC | + |
|
Preference number: 5 (lower is better) Translates to: RWKEAFHPPSKRQVR*HRWPQELWDRDLSA Trigger: GGCAGAGAGATCTCGGTCCCAGAGCTCCTGGGGCCACCTGTGTCATCGAACCTGCCTTTTGCTTGGAGGATGGAAGGCTTCTTTCCAGCG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000135035.2 |
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| CDS GCA 90 bp | CAACCTTCTCTCTCAGGCACTCAATGGCCTGGGGGACCACGCATTTaGGAGGGCCGTGAGGCACACCTAACTGGCCAAAGGCATTGGATC | + |
|
Preference number: 5 (lower is better) Translates to: QPSLSGTQWPGGPRI*EGREAHLTGQRHWI Trigger: GATCCAATGCCTTTGGCCAGTTAGGTGTGCCTCACGGCCCTCGCAAATGCGTGGTCCCCCAGGCCATTGAGTGCCTGAGAGAGAAGGTTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033127.12 ENSMUST00000216505.2 |
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| CDS GCA 90 bp | CTCTGGGGCAGAGGAAGGAACACAGCGCGGGAGGCCAGCTGCCCATaGTTGTTACGGCCCCAGACGTACAGCTCTCCTGTATCTGTTAAT | + |
|
Preference number: 5 (lower is better) Translates to: LWGRGRNTAREASCP*LLRPQTYSSPVSVN Trigger: ATTAACAGATACAGGAGAGCTGTACGTCTGGGGCCGTAACAAGCATGGGCAGCTGGCCTCCCGCGCTGTGTTCCTTCCTCTGCCCCAGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033127.12 ENSMUST00000216505.2 |
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| CDS GCA 90 bp | TCTATTCTCTGGGGCAGAGGAAGGAACACAGCGCGGGAGGCCAGCTaGCCATGCTTGTTACGGCCCCAGACGTACAGCTCTCCTGTATCT | + |
|
Preference number: 5 (lower is better) Translates to: SILWGRGRNTAREAS*PCLLRPQTYSSPVS Trigger: AGATACAGGAGAGCTGTACGTCTGGGGCCGTAACAAGCATGGGCAGCTGGCCTCCCGCGCTGTGTTCCTTCCTCTGCCCCAGAGAATAGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033127.12 ENSMUST00000216505.2 |
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| CDS CCA 90 bp | TCAGTCCAGCAGCGACACAAACAACCTTCTCTCTCAGGCACTCAATaGCCTGGGGGACCACGCATTTGCGAGGGCCGTGAGGCACACCTA | + |
|
Preference number: 5 (lower is better) Translates to: SVQQRHKQPSLSGTQ*PGGPRICEGREAHL Trigger: TAGGTGTGCCTCACGGCCCTCGCAAATGCGTGGTCCCCCAGGCCATTGAGTGCCTGAGAGAGAAGGTTGTTTGTGTCGCTGCTGGACTGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033127.12 ENSMUST00000216505.2 |
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| CDS GCA 90 bp | GTCACTCTGCTGGGTTCCTTTGCTGTCAAAAACAGTGGGAGATTCTaGCCAGGGCACAGGCGTCGACCAGAAGATGCCAAGCCAGTCCCC | + |
|
Preference number: 5 (lower is better) Translates to: VTLLGSFAVKNSGRF*PGHRRRPEDAKPVP Trigger: GGGGACTGGCTTGGCATCTTCTGGTCGACGCCTGTGCCCTGGGCAGAATCTCCCACTGTTTTTGACAGCAAAGGAACCCAGCAGAGTGAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033127.12 ENSMUST00000216505.2 |
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| CDS-3UTR CAA 90 bp | GTCCACGGCACCCTGAGATTCAGTGTTCTCTGTGTCATCTGGGAGAGGGCAGGTATGGCCAAGGCCAAGTaGCCCATAGCTGTTTGCACC | + |
|
Preference number: 5 (lower is better) Translates to: VHGTLRFSVLCVIWERAGMAKAK*PIAVCT Trigger: GGTGCAAACAGCTATGGGCAACTTGGCCTTGGCCAT...ACCTGCCCTCTCCCAGATGACACAGAGAACACTGAATCTCAGGGTGCCGTGGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216505.2 |
||
| CDS GCA 90 bp | CCAGCCACTCCAGACAGCAGTGACCTTTTCATCCTGAAAGTAATGTaGTTCTATTCTCTGGGGCAGAGGAAGGAACACAGCGCGGGAGGC | + |
|
Preference number: 5 (lower is better) Translates to: PATPDSSDLFILKVM*FYSLGQRKEHSAGG Trigger: GCCTCCCGCGCTGTGTTCCTTCCTCTGCCCCAGAGAATAGAAGCACATTACTTTCAGGATGAAAAGGTCACTGCTGTCTGGAGTGGCTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033127.12 ENSMUST00000216505.2 |
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| CDS-3UTR CAA 90 bp | TTGCGCTCTTGCGCTCTGGCTCCTAAAGATGTAAGCAATAGAGCTCTTGCTCTCGTTGCCCATAGCTGTTaGCACCCCAGGCGAAGAGCA | + |
|
Preference number: 5 (lower is better) Translates to: LRSCALAPKDVSNRALALVAHSC*HPRRRA Trigger: TGCTCTTCGCCTGGGGTGCAAACAGCTATGGGCAAC...GAGAGCAAGAGCTCTATTGCTTACATCTTTAGGAGCCAGAGCGCAAGAGCGCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216505.2 |
||
| CDS-3UTR CAA 90 bp | AGAAATGGGGCTGGTTTGAATGGGTCTGCCGGCGACTCTTCTCTTTCCAGGTCCCCCCAGGTAAACACCTaGCCAGTTTCTGTCTTAGCA | + |
|
Preference number: 5 (lower is better) Translates to: RNGAGLNGSAGDSSLSRSPQVNT*PVSVLA Trigger: TGCTAAGACAGAAACTGGCAAGGTGTTTACCTGGGG...GGACCTGGAAAGAGAAGAGTCGCCGGCAGACCCATTCAAACCAGCCCCATTTCT 53% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000216505.2 |
||
| CDS TCA 90 bp | GCAGAATGCCCTCCTCCTCCTGTGACACTCTTGATACACCCAGCTTaGCAGAAGTCACTCAGTTGCTGGGGCAGAAACACATCTTCCTTA | + |
|
Preference number: 5 (lower is better) Translates to: AECPPPPVTLLIHPA*QKSLSCWGRNTSSL Trigger: TAAGGAAGATGTGTTTCTGCCCCAGCAACTGAGTGACTTCTGTCAAGCTGGGTGTATCAAGAGTGTCACAGGAGGAGGAGGGCATTCTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033127.12 ENSMUST00000135035.2 ENSMUST00000216505.2 |
||
| CDS GCA 90 bp | GCACAGAGTGCTTCCCTTCCAGAAGCCAGGAGTCAGACTAATTACTaGCAAGTTGTGCTCCGAGCCACAAGAAATCTCTGTTGCTCCTGT | + |
|
Preference number: 5 (lower is better) Translates to: AQSASLPEARSQTNY*QVVLRATRNLCCSC Trigger: ACAGGAGCAACAGAGATTTCTTGTGGCTCGGAGCACAACTTGGCAGTAATTAGTCTGACTCCTGGCTTCTGGAAGGGAAGCACTCTGTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216505.2 |
||
| CDS-3UTR CAA 90 bp | CTGGTCTCAGGGGTAACTACCTCCTTCCATCCAGCAATGGCAGCTGCAACAGATCACAAGAAATCTCTGTaGCTCCTGTCAGGCAATGCA | + |
|
Preference number: 5 (lower is better) Translates to: LVSGVTTSFHPAMAAATDHKKSL*LLSGNA Trigger: TGCATTGCCTGACAGGAGCAACAGAGATTTCTTGTG...ATCTGTTGCAGCTGCCATTGCTGGATGGAAGGAGGTAGTTACCCCTGAGACCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216505.2 |
||
| CDS-3UTR CAA 90 bp | AGCTCTGGTTGCTTGGGCCCTCTCTTGTGGCTGAGTTGTGTGCTTCTTGTATTGCTTGATACACCCAGCTaGACAGAAGTCACTCAGTTG | + |
|
Preference number: 5 (lower is better) Translates to: SSGCLGPLLWLSCVLLVLLDTPS*TEVTQL Trigger: CAACTGAGTGACTTCTGTCAAGCTGGGTGTATCAAG...CAATACAAGAAGCACACAACTCAGCCACAAGAGAGGGCCCAAGCAACCAGAGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216505.2 |
||
| CDS-3UTR CAA 90 bp | GAAGATGTAAGCAATAAAGCTTTGCCGCAGAAGATTCCGGTTTGCTGCGTCTTTCTAATTACTGCCAAGTaGTGCTCCGAGCCACAAGAA | + |
|
Preference number: 5 (lower is better) Translates to: EDVSNKALPQKIPVCCVFLITAK*CSEPQE Trigger: TTCTTGTGGCTCGGAGCACAACTTGGCAGTAATTAG...AAAGACGCAGCAAACCGGAATCTTCTGCGGCAAAGCTTTATTGCTTACATCTTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216505.2 |
||
| CDS GCA 72 bp | CTCTCAGGCACTCAATGGCCTGGGGGACCACGCATTTaGGAGGGCCGTGAGGCACACCTAACTGGCCAAAGG | + |
|
Preference number: 6 (lower is better) Translates to: LSGTQWPGGPRI*EGREAHLTGQR Trigger: CCTTTGGCCAGTTAGGTGTGCCTCACGGCCCTCGCAAATGCGTGGTCCCCCAGGCCATTGAGTGCCTGAGAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033127.12 ENSMUST00000216505.2 |
||
| CDS CAA 72 bp | GGAAGGAACACAGCGCGGGAGGCCAGCTGCCCATGCTaGTTACGGCCCCAGACGTACAGCTCTCCTGTATCT | + |
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Preference number: 6 (lower is better) Translates to: GRNTAREASCPC*LRPQTYSSPVS Trigger: AGATACAGGAGAGCTGTACGTCTGGGGCCGTAACAAGCATGGGCAGCTGGCCTCCCGCGCTGTGTTCCTTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033127.12 ENSMUST00000216505.2 |
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| CDS TCA 72 bp | TCAATGGCCTGGGGGACCACGCATTTGCGAGGGCCGTaGGGCACACCTAACTGGCCAAAGGCATTGGATCCA | + |
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Preference number: 6 (lower is better) Translates to: SMAWGTTHLRGP*GTPNWPKALDP Trigger: TGGATCCAATGCCTTTGGCCAGTTAGGTGTGCCTCACGGCCCTCGCAAATGCGTGGTCCCCCAGGCCATTGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033127.12 ENSMUST00000216505.2 |
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| CDS GCA 72 bp | CCGAGCGCTTTCCCAGAATGGATGCTTTGCTCTGGATaGAGGGTCCTCCCGAAGTGCTTCAGTCCCTCGGGT | + |
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Preference number: 6 (lower is better) Translates to: PSAFPEWMLCSG*RVLPKCFSPSG Trigger: ACCCGAGGGACTGAAGCACTTCGGGAGGACCCTGCATCCAGAGCAAAGCATCCATTCTGGGAAAGCGCTCGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135035.2 |
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| CDS CCA 72 bp | AGGCGTCGACCAGAAGATGCCAAGCCAGTCCCCCACTaGAACACACTGCCAGTCGCTGTAGTGGCTAAGGCA | + |
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Preference number: 6 (lower is better) Translates to: RRRPEDAKPVPH*NTLPVAVVAKA Trigger: TGCCTTAGCCACTACAGCGACTGGCAGTGTGTTCCAGTGGGGGACTGGCTTGGCATCTTCTGGTCGACGCCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033127.12 ENSMUST00000216505.2 |
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| CDS CAA 72 bp | AGTCTGGCGGCCGAGCGCTTTCCCAGAATGGATGCTTaGCTCTGGATGCAGGGTCCTCCCGAAGTGCTTCAG | + |
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Preference number: 6 (lower is better) Translates to: SLAAERFPRMDA*LWMQGPPEVLQ Trigger: CTGAAGCACTTCGGGAGGACCCTGCATCCAGAGCAAAGCATCCATTCTGGGAAAGCGCTCGGCCGCCAGACT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135035.2 |
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| CDS CAA 90 bp | CAGTTGCTGGGGCAGAAACACATCTTCCTTATGGCCAAGGCCAAGTaGCCCATAGCTGTTTGCACCCCAGGCGAAGAGCACAGCAGCGGC | + |
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Preference number: 6 (lower is better) Translates to: QLLGQKHIFLMAKAK*PIAVCTPGEEHSSG Trigger: GCCGCTGCTGTGCTCTTCGCCTGGGGTGCAAACAGCTATGGGCAACTTGGCCTTGGCCATAAGGAAGATGTGTTTCTGCCCCAGCAACTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033127.12 ENSMUST00000216505.2 |
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| CDS TCA 72 bp | GAAGCCTTCCATCCTCCAAGCAAAAGGCAGGTTCGATaGCACAGGTGGCCCCAGGAGCTCTGGGACCGAGAT | + |
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Preference number: 6 (lower is better) Translates to: EAFHPPSKRQVR*HRWPQELWDRD Trigger: ATCTCGGTCCCAGAGCTCCTGGGGCCACCTGTGTCATCGAACCTGCCTTTTGCTTGGAGGATGGAAGGCTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000135035.2 |
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| CDS GCA 72 bp | TTCCTTATGGCCAAGGCCAAGTTGCCCATAGCTGTTTaGACCCCAGGCGAAGAGCACAGCAGCGGCAGAGAC | + |
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Preference number: 6 (lower is better) Translates to: FLMAKAKLPIAV*TPGEEHSSGRD Trigger: GTCTCTGCCGCTGCTGTGCTCTTCGCCTGGGGTGCAAACAGCTATGGGCAACTTGGCCTTGGCCATAAGGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033127.12 ENSMUST00000216505.2 |
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| CDS GCA 72 bp | TTCCTTATGGCCAAGGCCAAGTTGCCCATAGCTGTTTaGACCATCCACAGGACGCTCCCCAGGGTGATGGCG | + |
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Preference number: 6 (lower is better) Translates to: FLMAKAKLPIAV*TIHRTLPRVMA Trigger: CGCCATCACCCTGGGGAGCGTCCTGTGGATGGTGCAAACAGCTATGGGCAACTTGGCCTTGGCCATAAGGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135035.2 |
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| CDS CAA 72 bp | CTTCCTTATGGCCAAGGCCAAGTTGCCCATAGCTGTTaGCACCATCCACAGGACGCTCCCCAGGGTGATGGC | + |
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Preference number: 6 (lower is better) Translates to: LPYGQGQVAHSC*HHPQDAPQGDG Trigger: GCCATCACCCTGGGGAGCGTCCTGTGGATGGTGCAAACAGCTATGGGCAACTTGGCCTTGGCCATAAGGAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135035.2 |
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| CDS CAA 90 bp | CAGTTGCTGGGGCAGAAACACATCTTCCTTATGGCCAAGGCCAAGTaGCCCATAGCTGTTTGCACCATCCACAGGACGCTCCCCAGGGTG | + |
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Preference number: 6 (lower is better) Translates to: QLLGQKHIFLMAKAK*PIAVCTIHRTLPRV Trigger: CACCCTGGGGAGCGTCCTGTGGATGGTGCAAACAGCTATGGGCAACTTGGCCTTGGCCATAAGGAAGATGTGTTTCTGCCCCAGCAACTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000135035.2 |
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| CDS TCA 72 bp | AGAAATCTCTGTTGCTCCTGTCAGGCAATGCAGAGGTaGAGGCACACTGTTCTGTGGCCCCTGGAAGGCGAG | + |
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Preference number: 6 (lower is better) Translates to: RNLCCSCQAMQR*RHTVLWPLEGE Trigger: CTCGCCTTCCAGGGGCCACAGAACAGTGTGCCTTCACCTCTGCATTGCCTGACAGGAGCAACAGAGATTTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033127.12 ENSMUST00000216505.2 |
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| CDS GCA 72 bp | CTGGGTTCCTTTGCTGTCAAAAACAGTGGGAGATTCTaGCCAGGGCACAGGCGTCGACCAGAAGATGCCAAG | + |
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Preference number: 6 (lower is better) Translates to: LGSFAVKNSGRF*PGHRRRPEDAK Trigger: CTTGGCATCTTCTGGTCGACGCCTGTGCCCTGGGCAGAATCTCCCACTGTTTTTGACAGCAAAGGAACCCAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033127.12 ENSMUST00000216505.2 |
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| CDS GCA 72 bp | GAGCCACAAGAAATCTCTGTTGCTCCTGTCAGGCAATaGAGAGGTGAAGGCACACTGTTCTGTGGCCCCTGG | + |
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Preference number: 6 (lower is better) Translates to: EPQEISVAPVRQ*RGEGTLFCGPW Trigger: CCAGGGGCCACAGAACAGTGTGCCTTCACCTCTGCATTGCCTGACAGGAGCAACAGAGATTTCTTGTGGCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033127.12 ENSMUST00000216505.2 |
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| CDS CCA 72 bp | CAATGCAGAGGTGAAGGCACACTGTTCTGTGGCCCCTaGAAGGCGAGCGATGAGTCTTGCTCTACAGGTTTC | + |
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Preference number: 6 (lower is better) Translates to: QCRGEGTLFCGP*KASDESCSTGF Trigger: GAAACCTGTAGAGCAAGACTCATCGCTCGCCTTCCAGGGGCCACAGAACAGTGTGCCTTCACCTCTGCATTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033127.12 ENSMUST00000216505.2 |
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| CDS CAA 72 bp | CACATGCCGTGTTCGTTCCAACCCCAGGAGCAGCACTaGTCCCTAATTACTGCCAAGTTGTGCTCCGAGCCA | + |
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Preference number: 6 (lower is better) Translates to: HMPCSFQPQEQH*SLITAKLCSEP Trigger: TGGCTCGGAGCACAACTTGGCAGTAATTAGGGACAAGTGCTGCTCCTGGGGTTGGAACGAACACGGCATGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033127.12 |
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| CDS CAA 90 bp | CCATCCCCACACATGCCGTGTTCGTTCCAACCCCAGGAGCAGCACTaGTCCCTAATTACTGCCAAGTTGTGCTCCGAGCCACAAGAAATC | + |
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Preference number: 6 (lower is better) Translates to: PSPHMPCSFQPQEQH*SLITAKLCSEPQEI Trigger: GATTTCTTGTGGCTCGGAGCACAACTTGGCAGTAATTAGGGACAAGTGCTGCTCCTGGGGTTGGAACGAACACGGCATGTGTGGGGATGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033127.12 |
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| CDS GCA 72 bp | TGGAACACACTGCCAGTCGCTGTAGTGGCTAAGGCATaGCTCAGTCCAGCAGCGACACAAACAACCTTCTCT | + |
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Preference number: 6 (lower is better) Translates to: WNTLPVAVVAKA*LSPAATQTTFS Trigger: AGAGAAGGTTGTTTGTGTCGCTGCTGGACTGAGGCATGCCTTAGCCACTACAGCGACTGGCAGTGTGTTCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033127.12 ENSMUST00000216505.2 |
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| CDS CAA 72 bp | CTGCCAAGTTGTGCTCCGAGCCACAAGAAATCTCTGTaGCTCCTGTCAGGCAATGCAGAGGTGAAGGCACAC | + |
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Preference number: 6 (lower is better) Translates to: LPSCAPSHKKSL*LLSGNAEVKAH Trigger: GTGTGCCTTCACCTCTGCATTGCCTGACAGGAGCAACAGAGATTTCTTGTGGCTCGGAGCACAACTTGGCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033127.12 ENSMUST00000216505.2 |
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| CDS CAA 72 bp | CCCCAGGAGCAGCACTTGTCCCTAATTACTGCCAAGTaGTGCTCCGAGCCACAAGAAATCTCTGTTGCTCCT | + |
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Preference number: 6 (lower is better) Translates to: PQEQHLSLITAK*CSEPQEISVAP Trigger: AGGAGCAACAGAGATTTCTTGTGGCTCGGAGCACAACTTGGCAGTAATTAGGGACAAGTGCTGCTCCTGGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033127.12 |
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| CDS CAA 90 bp | TGCAGAATGCCCTCCTCCTCCTGTGACACTCTTGATACACCCAGCTaGACAGAAGTCACTCAGTTGCTGGGGCAGAAACACATCTTCCTT | + |
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Preference number: 6 (lower is better) Translates to: CRMPSSSCDTLDTPS*TEVTQLLGQKHIFL Trigger: AAGGAAGATGTGTTTCTGCCCCAGCAACTGAGTGACTTCTGTCAAGCTGGGTGTATCAAGAGTGTCACAGGAGGAGGAGGGCATTCTGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033127.12 ENSMUST00000135035.2 ENSMUST00000216505.2 |
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| CDS CAA 90 bp | GTGCTTCCCTTCCAGAAGCCAGGAGTCAGACTAATTACTGCCAAGTaGTGCTCCGAGCCACAAGAAATCTCTGTTGCTCCTGTCAGGCAA | + |
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Preference number: 6 (lower is better) Translates to: VLPFQKPGVRLITAK*CSEPQEISVAPVRQ Trigger: TTGCCTGACAGGAGCAACAGAGATTTCTTGTGGCTCGGAGCACAACTTGGCAGTAATTAGTCTGACTCCTGGCTTCTGGAAGGGAAGCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216505.2 |
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| CDS GCA 72 bp | GTTCCAACCCCAGGAGCAGCACTTGTCCCTAATTACTaGCAAGTTGTGCTCCGAGCCACAAGAAATCTCTGT | + |
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Preference number: 6 (lower is better) Translates to: VPTPGAALVPNY*QVVLRATRNLC Trigger: ACAGAGATTTCTTGTGGCTCGGAGCACAACTTGGCAGTAATTAGGGACAAGTGCTGCTCCTGGGGTTGGAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033127.12 |
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| CDS CCA 72 bp | ACGTACAGCTCTCCTGTATCTGTTAATGAGGCCGAGTaGTCAGATCCTGCAACAGCACACACTGCTGTAGAA | + |
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Preference number: 6 (lower is better) Translates to: TYSSPVSVNEAE*SDPATAHTAVE Trigger: TTCTACAGCAGTGTGTGCTGTTGCAGGATCTGACCACTCGGCCTCATTAACAGATACAGGAGAGCTGTACGT 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033127.12 ENSMUST00000216505.2 |
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| CDS GCA 72 bp | CCAGACAGCAGTGACCTTTTCATCCTGAAAGTAATGTaGTTCTATTCTCTGGGGCAGAGGAAGGAACACAGC | + |
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Preference number: 6 (lower is better) Translates to: PDSSDLFILKVM*FYSLGQRKEHS Trigger: GCTGTGTTCCTTCCTCTGCCCCAGAGAATAGAAGCACATTACTTTCAGGATGAAAAGGTCACTGCTGTCTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033127.12 ENSMUST00000216505.2 |
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| CDS CAA 72 bp | TTCCAGAAGCCAGGAGTCAGACTAATTACTGCCAAGTaGTGCTCCGAGCCACAAGAAATCTCTGTTGCTCCT | + |
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Preference number: 6 (lower is better) Translates to: FQKPGVRLITAK*CSEPQEISVAP Trigger: AGGAGCAACAGAGATTTCTTGTGGCTCGGAGCACAACTTGGCAGTAATTAGTCTGACTCCTGGCTTCTGGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216505.2 |
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