Pregenerated sensors for SERF2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000074884Ensembl transcript IDs: ENSMUST00000110615.8, ENSMUST00000139253.8, ENSMUST00000148575.2, ENSMUST00000154418.8
Found 106 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AGCCGCCTGCTCTACATCCTCCTCCACGTGGGAGCCTCAGCAATCTaGTGCCTCCTGTTTGGCAGCTCGGACTGCCCAGTTCTCAGTGGC | + |
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Preference number: 1 (lower is better) Translates to: SRLLYILLHVGASAI*CLLFGSSDCPVLSG Trigger: GCCACTGAGAACTGGGCAGTCCGAGCTGCCAAACAGGAGGCAGCAGATTGCTGAGGCTCCCACGTGGAGGAGGATGTAGAGCAGGCGGCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154418.8 |
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| 3UTR GCA 90 bp | GCTGGGCCTGTGTCCTCCTCTATCTGGGGCTGCTCCTGGCACCACTaGTGGCTCCCCACTCAGAATCACCACCACCCTAGTATATTCAGG | + |
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Preference number: 1 (lower is better) Translates to: AGPVSSSIWGCSWHH*WLPTQNHHHPSIFR Trigger: CCTGAATATACTAGGGTGGTGGTGATTCTGAGTGGGGAGCCAGCAGTGGTGCCAGGAGCAGCCCCAGATAGAGGAGGACACAGGCCCAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000139253.8 |
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| 3UTR GCA 90 bp | GCAGGGCCAGGTCAGCTGACCAAGAGACCCCTCCAGCTGCTCAGGTaGAGAGCCAGCATCTTTCCTACAGCTACTCTGGCTTCCACTTCG | + |
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Preference number: 1 (lower is better) Translates to: AGPGQLTKRPLQLLR*RASIFPTATLASTS Trigger: CGAAGTGGAAGCCAGAGTAGCTGTAGGAAAGATGCTGGCTCTGCACCTGAGCAGCTGGAGGGGTCTCTTGGTCAGCTGACCTGGCCCTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139253.8 |
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| 3UTR CCA 90 bp | CTGCCTCCTGTTTGGCAGCTCGGACTGCCCAGTTCTCAGTGGCTCTaGCGCTGTGTATCGAGTGTGTGCAGGAACTGCCACCTTCCACCT | + |
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Preference number: 1 (lower is better) Translates to: LPPVWQLGLPSSQWL*RCVSSVCRNCHLPP Trigger: AGGTGGAAGGTGGCAGTTCCTGCACACACTCGATACACAGCGCCAGAGCCACTGAGAACTGGGCAGTCCGAGCTGCCAAACAGGAGGCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154418.8 |
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| 3UTR GCA 90 bp | TTAAAGTTGCCTCATGCTGGGCCTGTGTCCTCCTCTATCTGGGGCTaGTCCTGGCACCACTGCTGGCTCCCCACTCAGAATCACCACCAC | + |
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Preference number: 1 (lower is better) Translates to: LKLPHAGPVSSSIWG*SWHHCWLPTQNHHH Trigger: GTGGTGGTGATTCTGAGTGGGGAGCCAGCAGTGGTGCCAGGAGCAGCCCCAGATAGAGGAGGACACAGGCCCAGCATGAGGCAACTTTAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000139253.8 |
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| 3UTR GCA 90 bp | AGTTCTCAGTGGCTCTGGCGCTGTGTATCGAGTGTGTGCAGGAACTaGCACCTTCCACCTGCTGCAGGCTGTGCTGCTAGTTCGCCTCCA | + |
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Preference number: 1 (lower is better) Translates to: SSQWLWRCVSSVCRN*HLPPAAGCAASSPP Trigger: TGGAGGCGAACTAGCAGCACAGCCTGCAGCAGGTGGAAGGTGGCAGTTCCTGCACACACTCGATACACAGCGCCAGAGCCACTGAGAACT 59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154418.8 |
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| 3UTR CCA 90 bp | GGGCCTGTGTCCTCCTCTATCTGGGGCTGCTCCTGGCACCACTGCTaGCTCCCCACTCAGAATCACCACCACCCTAGTATATTCAGGCAA | + |
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Preference number: 1 (lower is better) Translates to: GPVSSSIWGCSWHHC*LPTQNHHHPSIFRQ Trigger: TTGCCTGAATATACTAGGGTGGTGGTGATTCTGAGTGGGGAGCCAGCAGTGGTGCCAGGAGCAGCCCCAGATAGAGGAGGACACAGGCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000139253.8 |
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| 3UTR TCA 90 bp | CATCCTGCTGTGGACCTGTTTCTTGGACCAGTGGCTGCCACTCTCTaGCAGAGTCTAGGTGTAGCCGCCTGCTCTACATCCTCCTCCACG | + |
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Preference number: 1 (lower is better) Translates to: HPAVDLFLGPVAATL*QSLGVAACSTSSST Trigger: CGTGGAGGAGGATGTAGAGCAGGCGGCTACACCTAGACTCTGTCAGAGAGTGGCAGCCACTGGTCCAAGAAACAGGTCCACAGCAGGATG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154418.8 |
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| 3UTR GCA 90 bp | TTCACTAAGGGTAGCTGGGCTACCTTCTGGGTTAAAGTTGCCTCATaGTGGGCCTGTGTCCTCCTCTATCTGGGGCTGCTCCTGGCACCA | + |
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Preference number: 1 (lower is better) Translates to: FTKGSWATFWVKVAS*WACVLLYLGLLLAP Trigger: TGGTGCCAGGAGCAGCCCCAGATAGAGGAGGACACAGGCCCAGCATGAGGCAACTTTAACCCAGAAGGTAGCCCAGCTACCCTTAGTGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139253.8 |
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| 3UTR GCA 90 bp | TATCCCCAGGCATCCTGCTGTGGACCTGTTTCTTGGACCAGTGGCTaGCACTCTCTGACAGAGTCTAGGTGTAGCCGCCTGCTCTACATC | + |
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Preference number: 1 (lower is better) Translates to: YPQASCCGPVSWTSG*HSLTESRCSRLLYI Trigger: GATGTAGAGCAGGCGGCTACACCTAGACTCTGTCAGAGAGTGGCAGCCACTGGTCCAAGAAACAGGTCCACAGCAGGATGCCTGGGGATA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154418.8 |
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| 3UTR CCA 90 bp | GCAGAACTGGAGAAGACCTTCACTAAGGGTAGCTGGGCTACCTTCTaGGTTAAAGTTGCCTCATGCTGGGCCTGTGTCCTCCTCTATCTG | + |
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Preference number: 1 (lower is better) Translates to: AELEKTFTKGSWATF*VKVASCWACVLLYL Trigger: CAGATAGAGGAGGACACAGGCCCAGCATGAGGCAACTTTAACCCAGAAGGTAGCCCAGCTACCCTTAGTGAAGGTCTTCTCCAGTTCTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139253.8 |
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| 3UTR CCA 90 bp | AGCTATGAGGAAGCAGAACTGGAGAAGACCTTCACTAAGGGTAGCTaGGCTACCTTCTGGGTTAAAGTTGCCTCATGCTGGGCCTGTGTC | + |
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Preference number: 1 (lower is better) Translates to: SYEEAELEKTFTKGS*ATFWVKVASCWACV Trigger: GACACAGGCCCAGCATGAGGCAACTTTAACCCAGAAGGTAGCCCAGCTACCCTTAGTGAAGGTCTTCTCCAGTTCTGCTTCCTCATAGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139253.8 |
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| 3UTR CCA 90 bp | TTGTTTTACAGAAGCCCTCAGTCTGTTTCTGCTGCCCCCAAACAGTaGAGCCAGAGGATGGTGAGTCACATGCGCAATCTAGCCAAGCTG | + |
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Preference number: 1 (lower is better) Translates to: LFYRSPQSVSAAPKQ*SQRMVSHMRNLAKL Trigger: CAGCTTGGCTAGATTGCGCATGTGACTCACCATCCTCTGGCTCCACTGTTTGGGGGCAGCAGAAACAGACTGAGGGCTTCTGTAAAACAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000139253.8 |
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| 3UTR TCA 90 bp | TTCCAAAAGTTCTTGGGAGAGACACACAAGGATCTGCCCTGGTTATaGGGAAGTAGGGAGGTTCAAAAGCTAAGGCCCTGCATCATCTCT | + |
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Preference number: 1 (lower is better) Translates to: FQKFLGETHKDLPWL*GSREVQKLRPCIIS Trigger: AGAGATGATGCAGGGCCTTAGCTTTTGAACCTCCCTACTTCCTCATAACCAGGGCAGATCCTTGTGTGTCTCTCCCAAGAACTTTTGGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000139253.8 |
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| 3UTR CCA 90 bp | CACAGCAACGAGGCTTCCTACCTGGCCGAGTTATTTGGACCCTTGTaGATTATCAAGGTTTACAAGTATGAGTTCCAGGTGAGCATCAAG | + |
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Preference number: 1 (lower is better) Translates to: HSNEASYLAELFGPL*IIKVYKYEFQVSIK Trigger: CTTGATGCTCACCTGGAACTCATACTTGTAAACCTTGATAATCCACAAGGGTCCAAATAACTCGGCCAGGTAGGAAGCCTCGTTGCTGTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139253.8 |
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| 3UTR TCA 90 bp | GGCCGAGTTATTTGGACCCTTGTGGATTATCAAGGTTTACAAGTATaGGTTCCAGGTGAGCATCAAGAGCTCAAAACCCCAACAACCCTC | + |
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Preference number: 1 (lower is better) Translates to: GRVIWTLVDYQGLQV*VPGEHQELKTPTTL Trigger: GAGGGTTGTTGGGGTTTTGAGCTCTTGATGCTCACCTGGAACTCATACTTGTAAACCTTGATAATCCACAAGGGTCCAAATAACTCGGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000139253.8 |
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| 3UTR CCA 90 bp | GCTCATAACCAGACAGAAGGATGGAGGGTTTGGGAATTTGACCATTaGTTAACCCCACACCCTTTGAAAAACTCTGCATTGCTTCTATCC | + |
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Preference number: 1 (lower is better) Translates to: AHNQTEGWRVWEFDH*LTPHPLKNSALLLS Trigger: GGATAGAAGCAATGCAGAGTTTTTCAAAGGGTGTGGGGTTAACCAATGGTCAAATTCCCAAACCCTCCATCCTTCTGTCTGGTTATGAGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000154418.8 |
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| 3UTR GCA 90 bp | TCCCCCAAACACAGAGACACACATCCTACCAACTTCTACCCAGAATaGTCAGATTCTAGCTGCTGTTTCCTTTTATTGAGTACCCACAAT | + |
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Preference number: 1 (lower is better) Translates to: SPKHRDTHPTNFYPE*SDSSCCFLLLSTHN Trigger: ATTGTGGGTACTCAATAAAAGGAAACAGCAGCTAGAATCTGAGCATTCTGGGTAGAAGTTGGTAGGATGTGTGTCTCTGTGTTTGGGGGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000139253.8 |
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| 3UTR GCA 90 bp | AATGGAGGAATTGAGGCACAAAAGATTAAACATCTCACCAAAGTTTaGATAGCCAGTTATATGCTGGAGCAAGAATTTGAACCCAGGTGT | + |
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Preference number: 1 (lower is better) Translates to: NGGIEAQKIKHLTKV*IASYMLEQEFEPRC Trigger: ACACCTGGGTTCAAATTCTTGCTCCAGCATATAACTGGCTATGCAAACTTTGGTGAGATGTTTAATCTTTTGTGCCTCAATTCCTCCATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139253.8 |
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| 3UTR CCA 90 bp | ACATTGTTCCTAAGAGCAATCCTTTCACACATAGAGACACACACATaGAATTCTGTCCAATCAAGGTGGCTAATCCTAAACCAATTAAAA | + |
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Preference number: 1 (lower is better) Translates to: TLFLRAILSHIETHT*NSVQSRWLILNQLK Trigger: TTTTAATTGGTTTAGGATTAGCCACCTTGATTGGACAGAATTCCATGTGTGTGTCTCTATGTGTGAAAGGATTGCTCTTAGGAACAATGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154418.8 |
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| 3UTR-3UTR CCA 90 bp | GCAATCTGCTGCCTCCTGTTTGGCAGCTCGGACTGCCCAGTTCTCAGTGGCTCTGCCGCTCCGGGCCGCTaGTCTCGGTCTCTAACTCCA | + |
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Preference number: 2 (lower is better) Translates to: AICCLLFGSSDCPVLSGSAAPGR*SRSLTP Trigger: TGGAGTTAGAGACCGAGACCAGCGGCCCGGAGCGGC...AGAGCCACTGAGAACTGGGCAGTCCGAGCTGCCAAACAGGAGGCAGCAGATTGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154418.8 |
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| 3UTR-3UTR CCA 90 bp | CATTGCTCCCCATCGGCACTTCTCTCTCTAGGGCAAAGGAGCAGGGCCAGGTCAAGCCCTAAGCAGTGGTaGAAGAAGCCCAGACCACAG | + |
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Preference number: 2 (lower is better) Translates to: HCSPSALLSLGQRSRARSSPKQW*KKPRPQ Trigger: CTGTGGTCTGGGCTTCTTCCACCACTGCTTAGGGCT...TGACCTGGCCCTGCTCCTTTGCCCTAGAGAGAGAAGTGCCGATGGGGAGCAATG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139253.8 |
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| 3UTR-3UTR CCA 90 bp | ATCCCCAGGCATCCTGCTGTGGACCTGTTTCTTGGACCAGTGGCTGCCACTCTCACATCCTCCTCCACGTaGGAGCCTCAGCAATCTGCT | + |
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Preference number: 2 (lower is better) Translates to: IPRHPAVDLFLGPVAATLTSSST*EPQQSA Trigger: AGCAGATTGCTGAGGCTCCCACGTGGAGGAGGATGT...GAGAGTGGCAGCCACTGGTCCAAGAAACAGGTCCACAGCAGGATGCCTGGGGAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154418.8 |
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| 3UTR-3UTR CCA 90 bp | GACCGTCTGTCTCCAATGACGGACATAGCCGTTTCAAGATTCGAACTCTGGATCGCCGCTCCGGGCCGCTaGTCTCGGTCTCTAACTCCA | + |
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Preference number: 2 (lower is better) Translates to: DRLSPMTDIAVSRFELWIAAPGR*SRSLTP Trigger: TGGAGTTAGAGACCGAGACCAGCGGCCCGGAGCGGC...GATCCAGAGTTCGAATCTTGAAACGGCTATGTCCGTCATTGGAGACAGACGGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000148575.2 ENSMUST00000154418.8 |
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| 3UTR CAA 90 bp | AGAAGACCTTCACTAAGGGTAGCTGGGCTACCTTCTGGGTTAAAGTaGCCTCATGCTGGGCCTGTGTCCTCCTCTATCTGGGGCTGCTCC | + |
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Preference number: 2 (lower is better) Translates to: RRPSLRVAGLPSGLK*PHAGPVSSSIWGCS Trigger: GGAGCAGCCCCAGATAGAGGAGGACACAGGCCCAGCATGAGGCAACTTTAACCCAGAAGGTAGCCCAGCTACCCTTAGTGAAGGTCTTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139253.8 |
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| 3UTR-3UTR CCA 90 bp | CATTGCTCCCCATCGGCACTTCTCTCTCTAGGGCAAAGGAGCAGGGCCAGGTCAAGCTGGGCTACCTTCTaGGTTAAAGTTGCCTCATGC | + |
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Preference number: 2 (lower is better) Translates to: HCSPSALLSLGQRSRARSSWATF*VKVASC Trigger: GCATGAGGCAACTTTAACCCAGAAGGTAGCCCAGCT...TGACCTGGCCCTGCTCCTTTGCCCTAGAGAGAGAAGTGCCGATGGGGAGCAATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139253.8 |
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| 3UTR-3UTR GCA 90 bp | CGTGGACCACACCTTTGTGCCTGTCTTGAGAAGCTTCAGCTAGCAAAGAGGTTCCTAGGTGTAGCCGCCTaGTCTACATCCTCCTCCACG | + |
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Preference number: 2 (lower is better) Translates to: RGPHLCACLEKLQLAKRFLGVAA*STSSST Trigger: CGTGGAGGAGGATGTAGAGCAGGCGGCTACACCTAG...GAACCTCTTTGCTAGCTGAAGCTTCTCAAGACAGGCACAAAGGTGTGGTCCACG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154418.8 |
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| 3UTR-3UTR CCA 90 bp | ATGGTGAGTCACATGCGCAATCTAGCCAAGCTGAACCCTGTGAAGGGCCAGAGCTGTGAGCATCCAGAGTaGCTGACCACCAGAAGTTGG | + |
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Preference number: 2 (lower is better) Translates to: MVSHMRNLAKLNPVKGQSCEHPE*LTTRSW Trigger: CCAACTTCTGGTGGTCAGCCACTCTGGATGCTCACA...GCTCTGGCCCTTCACAGGGTTCAGCTTGGCTAGATTGCGCATGTGACTCACCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139253.8 |
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| 3UTR-3UTR CCA 90 bp | TCGCCAGTTCCTTCTCCCGCTCTTGTTTGGCCTTTTGTTCCCTGGACCGTCTGTAGTTCTCAGTGGCTCTaGCGCTGTGTATCGAGTGTG | + |
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Preference number: 2 (lower is better) Translates to: SPVPSPALVWPFVPWTVCSSQWL*RCVSSV Trigger: CACACTCGATACACAGCGCCAGAGCCACTGAGAACT...ACAGACGGTCCAGGGAACAAAAGGCCAAACAAGAGCGGGAGAAGGAACTGGCGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154418.8 |
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| 3UTR-3UTR GCA 90 bp | CTTTCTTTCACAGCAACGAGGCTTCCTACCTGGCCGAGTTATTTGGACCCTTGTTGCTCCTGGCACCACTaGTGGCTCCCCACTCAGAAT | + |
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Preference number: 2 (lower is better) Translates to: LSFTATRLPTWPSYLDPCCSWHH*WLPTQN Trigger: ATTCTGAGTGGGGAGCCAGCAGTGGTGCCAGGAGCA...ACAAGGGTCCAAATAACTCGGCCAGGTAGGAAGCCTCGTTGCTGTGAAAGAAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139253.8 |
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| 3UTR-3UTR CCA 90 bp | CTTTCTTTCACAGCAACGAGGCTTCCTACCTGGCCGAGTTATTTGGACCCTTGTTCCTGGCACCACTGCTaGCTCCCCACTCAGAATCAC | + |
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Preference number: 2 (lower is better) Translates to: LSFTATRLPTWPSYLDPCSWHHC*LPTQNH Trigger: GTGATTCTGAGTGGGGAGCCAGCAGTGGTGCCAGGA...ACAAGGGTCCAAATAACTCGGCCAGGTAGGAAGCCTCGTTGCTGTGAAAGAAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139253.8 |
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| 3UTR-3UTR CCA 90 bp | ATATGCTGGAGCAAGAATTTGAACCCAGGTGTGCCTCCACTTCTTACACCAGGTGTGTCCTCCTCTATCTaGGGCTGCTCCTGGCACCAC | + |
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Preference number: 2 (lower is better) Translates to: ICWSKNLNPGVPPLLTPGVSSSI*GCSWHH Trigger: GTGGTGCCAGGAGCAGCCCCAGATAGAGGAGGACAC...ACCTGGTGTAAGAAGTGGAGGCACACCTGGGTTCAAATTCTTGCTCCAGCATAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139253.8 |
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| 3UTR-3UTR GCA 90 bp | ACAGAGACACACATCCTACCAACTTCTACCCAGAATGCTCAGATTCTAGCTGCTTCCTCTATCTGGGGCTaGTCCTGGCACCACTGCTGG | + |
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Preference number: 2 (lower is better) Translates to: TETHILPTSTQNAQILAASSIWG*SWHHCW Trigger: CCAGCAGTGGTGCCAGGAGCAGCCCCAGATAGAGGA...AGCAGCTAGAATCTGAGCATTCTGGGTAGAAGTTGGTAGGATGTGTGTCTCTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139253.8 |
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| 3UTR-3UTR GCA 90 bp | ATATGCTGGAGCAAGAATTTGAACCCAGGTGTGCCTCCACTTCTTACACCAGGTCCCTCAGTCTGTTTCTaGTGCCCCCAAACAGTGGAG | + |
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Preference number: 2 (lower is better) Translates to: ICWSKNLNPGVPPLLTPGPSVCF*CPQTVE Trigger: CTCCACTGTTTGGGGGCAGCAGAAACAGACTGAGGG...ACCTGGTGTAAGAAGTGGAGGCACACCTGGGTTCAAATTCTTGCTCCAGCATAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000139253.8 |
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| 3UTR-3UTR GCA 90 bp | GACCGTCTGTCTCCAATGACGGACATAGCCGTTTCAAGATTCGAACTCTGGATCTGTGTATCGAGTGTGTaGAGGAACTGCCACCTTCCA | + |
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Preference number: 2 (lower is better) Translates to: DRLSPMTDIAVSRFELWICVSSV*RNCHLP Trigger: TGGAAGGTGGCAGTTCCTGCACACACTCGATACACA...GATCCAGAGTTCGAATCTTGAAACGGCTATGTCCGTCATTGGAGACAGACGGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154418.8 |
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| 3UTR-3UTR CCA 90 bp | GGCCCAAGGTTTAAAAACCTCTTTCTTTCACAGCAACGAGGCTTCCTACCTGGCAGCCTTCACAATAGTTaGGGGAAGGGAGTGTCAGCA | + |
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Preference number: 2 (lower is better) Translates to: GPRFKNLFLSQQRGFLPGSLHNS*GKGVSA Trigger: TGCTGACACTCCCTTCCCCCAACTATTGTGAAGGCT...GCCAGGTAGGAAGCCTCGTTGCTGTGAAAGAAAGAGGTTTTTAAACCTTGGGCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000139253.8 |
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| 3UTR-3UTR TCA 90 bp | CCCAACAACCCTCCCCCAAACACAGAGACACACATCCTACCAACTTCTACCCAGAAGACCTACAGAGATTaGAGATTTGGGTCTGCTCTT | + |
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Preference number: 2 (lower is better) Translates to: PNNPPPNTETHILPTSTQKTYRD*RFGSAL Trigger: AAGAGCAGACCCAAATCTTCAATCTCTGTAGGTCTT...CTGGGTAGAAGTTGGTAGGATGTGTGTCTCTGTGTTTGGGGGAGGGTTGTTGGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000139253.8 |
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| 3UTR-3UTR GCA 90 bp | GAGGTTCAAAAGCTAAGGCCCTGCATCATCTCTAATCAGCCTTTGGTTTCACAGGTTAAAGTTGCCTCATaGTGGGCCTGTGTCCTCCTC | + |
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Preference number: 2 (lower is better) Translates to: EVQKLRPCIISNQPLVSQVKVAS*WACVLL Trigger: GAGGAGGACACAGGCCCAGCATGAGGCAACTTTAAC...CTGTGAAACCAAAGGCTGATTAGAGATGATGCAGGGCCTTAGCTTTTGAACCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139253.8 |
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| 3UTR-3UTR GCA 90 bp | ACAGAGACACACATCCTACCAACTTCTACCCAGAATGCTCAGATTCTAGCTGCTTCAGTCTGTTTCTGCTaGCCCCAAACAGTGGAGCCA | + |
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Preference number: 2 (lower is better) Translates to: TETHILPTSTQNAQILAASVCFC*PQTVEP Trigger: TGGCTCCACTGTTTGGGGGCAGCAGAAACAGACTGA...AGCAGCTAGAATCTGAGCATTCTGGGTAGAAGTTGGTAGGATGTGTGTCTCTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139253.8 |
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| 3UTR-3UTR TCA 90 bp | GGCCCAAGGTTTAAAAACCTCTTTCTTTCACAGCAACGAGGCTTCCTACCTGGCACCACCTTCATTCCATaGGGATTGACAGAACAGAAG | + |
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Preference number: 2 (lower is better) Translates to: GPRFKNLFLSQQRGFLPGTTFIP*GLTEQK Trigger: CTTCTGTTCTGTCAATCCTCATGGAATGAAGGTGGT...GCCAGGTAGGAAGCCTCGTTGCTGTGAAAGAAAGAGGTTTTTAAACCTTGGGCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000139253.8 |
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| 3UTR-3UTR TCA 90 bp | GGCTTCCTACCTGGCCGAGTTATTTGGACCCTTGTGGATTATCAAGGTTTACAAGATCTGCCCTGGTTATaGGGAAGTAGGGAGGTTCAA | + |
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Preference number: 2 (lower is better) Translates to: GFLPGRVIWTLVDYQGLQDLPWL*GSREVQ Trigger: TTGAACCTCCCTACTTCCTCATAACCAGGGCAGATC...TTGTAAACCTTGATAATCCACAAGGGTCCAAATAACTCGGCCAGGTAGGAAGCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139253.8 |
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| 3UTR-3UTR TCA 90 bp | GGCCCAAGGTTTAAAAACCTCTTTCTTTCACAGCAACGAGGCTTCCTACCTGGCCTCACAACAACCCTGTaGGGTAGGTATTTTCTCCAT | + |
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Preference number: 2 (lower is better) Translates to: GPRFKNLFLSQQRGFLPGLTTTL*GRYFLH Trigger: ATGGAGAAAATACCTACCTCACAGGGTTGTTGTGAG...GCCAGGTAGGAAGCCTCGTTGCTGTGAAAGAAAGAGGTTTTTAAACCTTGGGCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000139253.8 |
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| 3UTR-3UTR TCA 90 bp | AAAATCCCGAGAAGCTGCTGTTTCTCGTCAGTTTTTCCAATACTGGATCTACATGTGGCTGCCACTCTCTaGCAGAGTCTAGGTGTAGCC | + |
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Preference number: 2 (lower is better) Translates to: KIPRSCCFSSVFPILDLHVAATL*QSLGVA Trigger: GGCTACACCTAGACTCTGTCAGAGAGTGGCAGCCAC...ATGTAGATCCAGTATTGGAAAAACTGACGAGAAACAGCAGCTTCTCGGGATTTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000154418.8 |
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| 3UTR-3UTR GCA 90 bp | CTTTCTTTCACAGCAACGAGGCTTCCTACCTGGCCGAGTTATTTGGACCCTTGTCAAAAGCTAAGGCCCTaGATCATCTCTAATCAGCCT | + |
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Preference number: 2 (lower is better) Translates to: LSFTATRLPTWPSYLDPCQKLRP*IISNQP Trigger: AGGCTGATTAGAGATGATGCAGGGCCTTAGCTTTTG...ACAAGGGTCCAAATAACTCGGCCAGGTAGGAAGCCTCGTTGCTGTGAAAGAAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139253.8 |
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| 3UTR-3UTR GCA 90 bp | CTTTCTTTCACAGCAACGAGGCTTCCTACCTGGCCGAGTTATTTGGACCCTTGTCTTCGCCTTCTTCCTTaGTTCACTCTATGTCATGGT | + |
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Preference number: 2 (lower is better) Translates to: LSFTATRLPTWPSYLDPCLRLLP*FTLCHG Trigger: ACCATGACATAGAGTGAAGCAAGGAAGAAGGCGAAG...ACAAGGGTCCAAATAACTCGGCCAGGTAGGAAGCCTCGTTGCTGTGAAAGAAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139253.8 |
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| 3UTR-3UTR GCA 90 bp | GACCTTCGCCAGTTCCTTCTCCCGCTCTTGTTTGGCCTTTTGTTCCCTGGACCGTTTATGACATGTCTATaGTGCCTTAAGACGAATGAT | + |
|
Preference number: 2 (lower is better) Translates to: DLRQFLLPLLFGLLFPGPFMTCL*CLKTND Trigger: ATCATTCGTCTTAAGGCAGCATAGACATGTCATAAA...CGGTCCAGGGAACAAAAGGCCAAACAAGAGCGGGAGAAGGAACTGGCGAAGGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154418.8 |
||
| 3UTR-3UTR CCA 90 bp | CCCAACAACCCTCCCCCAAACACAGAGACACACATCCTACCAACTTCTACCCAGTCTCTAATCAGCCTTTaGTTTCACAGCTATGAGGAA | + |
|
Preference number: 2 (lower is better) Translates to: PNNPPPNTETHILPTSTQSLISL*FHSYEE Trigger: TTCCTCATAGCTGTGAAACCAAAGGCTGATTAGAGA...CTGGGTAGAAGTTGGTAGGATGTGTGTCTCTGTGTTTGGGGGAGGGTTGTTGGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000139253.8 |
||
| 3UTR CAA 90 bp | TTTCACAGCAACGAGGCTTCCTACCTGGCCGAGTTATTTGGACCCTaGTGGATTATCAAGGTTTACAAGTATGAGTTCCAGGTGAGCATC | + |
|
Preference number: 2 (lower is better) Translates to: FHSNEASYLAELFGP*WIIKVYKYEFQVSI Trigger: GATGCTCACCTGGAACTCATACTTGTAAACCTTGATAATCCACAAGGGTCCAAATAACTCGGCCAGGTAGGAAGCCTCGTTGCTGTGAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139253.8 |
||
| 3UTR CAA 90 bp | CCTCTTTCTTTCACAGCAACGAGGCTTCCTACCTGGCCGAGTTATTaGGACCCTTGTGGATTATCAAGGTTTACAAGTATGAGTTCCAGG | + |
|
Preference number: 2 (lower is better) Translates to: PLSFTATRLPTWPSY*DPCGLSRFTSMSSR Trigger: CCTGGAACTCATACTTGTAAACCTTGATAATCCACAAGGGTCCAAATAACTCGGCCAGGTAGGAAGCCTCGTTGCTGTGAAAGAAAGAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139253.8 |
||
| 3UTR-3UTR GCA 90 bp | CCCAACAACCCTCCCCCAAACACAGAGACACACATCCTACCAACTTCTACCCAGTGCTCAGATTCTAGCTaGTGTTTCCTTTTATTGAGT | + |
|
Preference number: 2 (lower is better) Translates to: PNNPPPNTETHILPTSTQCSDSS*CFLLLS Trigger: ACTCAATAAAAGGAAACAGCAGCTAGAATCTGAGCA...CTGGGTAGAAGTTGGTAGGATGTGTGTCTCTGTGTTTGGGGGAGGGTTGTTGGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000139253.8 |
||
| 3UTR-3UTR GCA 90 bp | GCATCTATCTACCACTTCCTGGTAACCTGTATTCATTTTATGACATGTCTATGCGCCTCAGCAATCTGCTaGCTCCTGTTTGGCAGCTCG | + |
|
Preference number: 2 (lower is better) Translates to: ASIYHFLVTCIHFMTCLCASAIC*LLFGSS Trigger: CGAGCTGCCAAACAGGAGGCAGCAGATTGCTGAGGC...GCATAGACATGTCATAAAATGAATACAGGTTACCAGGAAGTGGTAGATAGATGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154418.8 |
||
| 3UTR-3UTR GCA 90 bp | GTTCCTAAGAGCAATCCTTTCACACATAGAGACACACACATGGAATTCTGTCCATATCCCCAGGCATCCTaGTGTGGACCTGTTTCTTGG | + |
|
Preference number: 2 (lower is better) Translates to: VPKSNPFTHRDTHMEFCPYPQAS*CGPVSW Trigger: CCAAGAAACAGGTCCACAGCAGGATGCCTGGGGATA...TGGACAGAATTCCATGTGTGTGTCTCTATGTGTGAAAGGATTGCTCTTAGGAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154418.8 |
||
| 3UTR-3UTR TCA 90 bp | ATAGTTCTTAGAGGACTCCTCTGCCATATAACTGGAGTGCTTTTCCGGTTGCAAACAAGATGCAGGGGATaGAGGGTACAGAGGATAAGA | + |
|
Preference number: 2 (lower is better) Translates to: IVLRGLLCHITGVLFRLQTRCRG*RVQRIR Trigger: TCTTATCCTCTGTACCCTTCATCCCCTGCATCTTGT...TTGCAACCGGAAAAGCACTCCAGTTATATGGCAGAGGAGTCCTCTAAGAACTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110615.8 |
||
| 3UTR-3UTR CCA 90 bp | CGTGGACCACACCTTTGTGCCTGTCTTGAGAAGCTTCAGCTAGCAAAGAGGTTCTCTGTCCAATCAAGGTaGCTAATCCTAAACCAATTA | + |
|
Preference number: 2 (lower is better) Translates to: RGPHLCACLEKLQLAKRFSVQSR*LILNQL Trigger: TAATTGGTTTAGGATTAGCCACCTTGATTGGACAGA...GAACCTCTTTGCTAGCTGAAGCTTCTCAAGACAGGCACAAAGGTGTGGTCCACG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154418.8 |
||
| 3UTR-3UTR TCA 90 bp | GTTCCTAAGAGCAATCCTTTCACACATAGAGACACACACATGGAATTCTGTCCACCCCCTTCAATCAGGTaGGACATTTGGGAAGAGATA | + |
|
Preference number: 2 (lower is better) Translates to: VPKSNPFTHRDTHMEFCPPPSIR*DIWEEI Trigger: TATCTCTTCCCAAATGTCTCACCTGATTGAAGGGGG...TGGACAGAATTCCATGTGTGTGTCTCTATGTGTGAAAGGATTGCTCTTAGGAAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000154418.8 |
||
| 3UTR-3UTR GCA 90 bp | GTTCCTAAGAGCAATCCTTTCACACATAGAGACACACACATGGAATTCTGTCCACCCTTTGAAAAACTCTaGATTGCTTCTATCCCCAGG | + |
|
Preference number: 2 (lower is better) Translates to: VPKSNPFTHRDTHMEFCPPFEKL*IASIPR Trigger: CCTGGGGATAGAAGCAATGCAGAGTTTTTCAAAGGG...TGGACAGAATTCCATGTGTGTGTCTCTATGTGTGAAAGGATTGCTCTTAGGAAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000154418.8 |
||
| 3UTR-3UTR CCA 90 bp | GTCAGGGAAAGACCTACAGAGATTGAAGATTTGGGTCTGCTCTTAGCAATCAAATGTCCAAGGTCGGTGTaGGGGATAAAAATCACAGAA | + |
|
Preference number: 2 (lower is better) Translates to: VRERPTEIEDLGLLLAIKCPRSV*GIKITE Trigger: TTCTGTGATTTTTATCCCCCACACCGACCTTGGACA...TTTGATTGCTAAGAGCAGACCCAAATCTTCAATCTCTGTAGGTCTTTCCCTGAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000139253.8 |
||
| 3UTR-3UTR CCA 90 bp | GAGGTTCAAAAGCTAAGGCCCTGCATCATCTCTAATCAGCCTTTGGTTTCACAGTCTGTAGTAACAAACTaGGAGACAGACCCTTTAGAT | + |
|
Preference number: 2 (lower is better) Translates to: EVQKLRPCIISNQPLVSQSVVTN*ETDPLD Trigger: ATCTAAAGGGTCTGTCTCCCAGTTTGTTACTACAGA...CTGTGAAACCAAAGGCTGATTAGAGATGATGCAGGGCCTTAGCTTTTGAACCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139253.8 |
||
| 3UTR-3UTR CCA 90 bp | GCATCTATCTACCACTTCCTGGTAACCTGTATTCATTTTATGACATGTCTATGCTGGGAATTTGACCATTaGTTAACCCCACACCCTTTG | + |
|
Preference number: 2 (lower is better) Translates to: ASIYHFLVTCIHFMTCLCWEFDH*LTPHPL Trigger: CAAAGGGTGTGGGGTTAACCAATGGTCAAATTCCCA...GCATAGACATGTCATAAAATGAATACAGGTTACCAGGAAGTGGTAGATAGATGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000154418.8 |
||
| 3UTR GCA 72 bp | GTCGCCATTTCGATCTCACCGCGCCGCCGCATAGGCTaGCGCTTCACAACTTCCGGCAACCCTCACAGCTTC | + |
|
Preference number: 3 (lower is better) Translates to: VAISISPRRRIG*RFTTSGNPHSF Trigger: GAAGCTGTGAGGGTTGCCGGAAGTTGTGAAGCGGCAGCCTATGCGGCGGCGCGGTGAGATCGAAATGGCGAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154418.8 |
||
| 3UTR-3UTR CAA 90 bp | GACCTTCGCCAGTTCCTTCTCCCGCTCTTGTTTGGCCTTTTGTTCCCTGGACCGTCTGCTGCCTCCTGTTaGGCAGCTCGGACTGCCCAG | + |
|
Preference number: 3 (lower is better) Translates to: DLRQFLLPLLFGLLFPGPSAASC*AARTAQ Trigger: CTGGGCAGTCCGAGCTGCCAAACAGGAGGCAGCAGA...CGGTCCAGGGAACAAAAGGCCAAACAAGAGCGGGAGAAGGAACTGGCGAAGGTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154418.8 |
||
| 3UTR GCA 72 bp | TGGCTCTGGCGCTGTGTATCGAGTGTGTGCAGGAACTaGCACCTTCCACCTGCTGCAGGCTGTGCTGCTAGT | + |
|
Preference number: 3 (lower is better) Translates to: WLWRCVSSVCRN*HLPPAAGCAAS Trigger: ACTAGCAGCACAGCCTGCAGCAGGTGGAAGGTGGCAGTTCCTGCACACACTCGATACACAGCGCCAGAGCCA 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154418.8 |
||
| 3UTR GCA 72 bp | CTCTACATCCTCCTCCACGTGGGAGCCTCAGCAATCTaGTGCCTCCTGTTTGGCAGCTCGGACTGCCCAGTT | + |
|
Preference number: 3 (lower is better) Translates to: LYILLHVGASAI*CLLFGSSDCPV Trigger: AACTGGGCAGTCCGAGCTGCCAAACAGGAGGCAGCAGATTGCTGAGGCTCCCACGTGGAGGAGGATGTAGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154418.8 |
||
| 3UTR CCA 72 bp | GTTTGGCAGCTCGGACTGCCCAGTTCTCAGTGGCTCTaGCGCTGTGTATCGAGTGTGTGCAGGAACTGCCAC | + |
|
Preference number: 3 (lower is better) Translates to: VWQLGLPSSQWL*RCVSSVCRNCH Trigger: GTGGCAGTTCCTGCACACACTCGATACACAGCGCCAGAGCCACTGAGAACTGGGCAGTCCGAGCTGCCAAAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154418.8 |
||
| 3UTR GCA 72 bp | TCAGCAATCTGCTGCCTCCTGTTTGGCAGCTCGGACTaGCCAGTTCTCAGTGGCTCTGGCGCTGTGTATCGA | + |
|
Preference number: 3 (lower is better) Translates to: SAICCLLFGSSD*PVLSGSGAVYR Trigger: TCGATACACAGCGCCAGAGCCACTGAGAACTGGGCAGTCCGAGCTGCCAAACAGGAGGCAGCAGATTGCTGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154418.8 |
||
| 3UTR GCA 72 bp | GCATCCTGCTGTGGACCTGTTTCTTGGACCAGTGGCTaGCACTCTCTGACAGAGTCTAGGTGTAGCCGCCTG | + |
|
Preference number: 3 (lower is better) Translates to: ASCCGPVSWTSG*HSLTESRCSRL Trigger: CAGGCGGCTACACCTAGACTCTGTCAGAGAGTGGCAGCCACTGGTCCAAGAAACAGGTCCACAGCAGGATGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154418.8 |
||
| 3UTR CCA 72 bp | AGCTGGGCTACCTTCTGGGTTAAAGTTGCCTCATGCTaGGCCTGTGTCCTCCTCTATCTGGGGCTGCTCCTG | + |
|
Preference number: 3 (lower is better) Translates to: SWATFWVKVASC*ACVLLYLGLLL Trigger: CAGGAGCAGCCCCAGATAGAGGAGGACACAGGCCCAGCATGAGGCAACTTTAACCCAGAAGGTAGCCCAGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139253.8 |
||
| 3UTR-3UTR CAA 90 bp | TTCGCCAGTTCCTTCTCCCGCTCTTGTTTGGCCTTTTGTTCCCTGGACCGTCTGTTCCTTCTCCCGCTCTaGTTTGGCCTTTTGTTCCCT | + |
|
Preference number: 3 (lower is better) Translates to: FASSFSRSCLAFCSLDRLFLLPL*FGLLFP Trigger: AGGGAACAAAAGGCCAAACAAGAGCGGGAGAAGGAA...CAGACGGTCCAGGGAACAAAAGGCCAAACAAGAGCGGGAGAAGGAACTGGCGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000148575.2 ENSMUST00000154418.8 |
||
| 3UTR GCA 72 bp | TGCCTTGTTTTACAGAAGCCCTCAGTCTGTTTCTGCTaGCCCCAAACAGTGGAGCCAGAGGATGGTGAGTCA | + |
|
Preference number: 3 (lower is better) Translates to: CLVLQKPSVCFC*PQTVEPEDGES Trigger: TGACTCACCATCCTCTGGCTCCACTGTTTGGGGGCAGCAGAAACAGACTGAGGGCTTCTGTAAAACAAGGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000139253.8 |
||
| 3UTR GCA 72 bp | TGTTGCCTTGTTTTACAGAAGCCCTCAGTCTGTTTCTaGTGCCCCCAAACAGTGGAGCCAGAGGATGGTGAG | + |
|
Preference number: 3 (lower is better) Translates to: CCLVLQKPSVCF*CPQTVEPEDGE Trigger: CTCACCATCCTCTGGCTCCACTGTTTGGGGGCAGCAGAAACAGACTGAGGGCTTCTGTAAAACAAGGCAACA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000139253.8 |
||
| 3UTR TCA 72 bp | TTCTTGGGAGAGACACACAAGGATCTGCCCTGGTTATaGGGAAGTAGGGAGGTTCAAAAGCTAAGGCCCTGC | + |
|
Preference number: 3 (lower is better) Translates to: FLGETHKDLPWL*GSREVQKLRPC Trigger: GCAGGGCCTTAGCTTTTGAACCTCCCTACTTCCTCATAACCAGGGCAGATCCTTGTGTGTCTCTCCCAAGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139253.8 |
||
| 3UTR CCA 72 bp | TCAGCCTTTGGTTTCACAGCTATGAGGAAGCAGAACTaGAGAAGACCTTCACTAAGGGTAGCTGGGCTACCT | + |
|
Preference number: 3 (lower is better) Translates to: SAFGFTAMRKQN*RRPSLRVAGLP Trigger: AGGTAGCCCAGCTACCCTTAGTGAAGGTCTTCTCCAGTTCTGCTTCCTCATAGCTGTGAAACCAAAGGCTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139253.8 |
||
| 3UTR-3UTR CAA 90 bp | TTCGCCAGTTCCTTCTCCCGCTCTTGTTTGGCCTTTTGTTCCCTGGACCGTCTGTCTTCACAAGACTATTaGCATCTATCTACCACTTCC | + |
|
Preference number: 3 (lower is better) Translates to: FASSFSRSCLAFCSLDRLSSQDY*HLSTTS Trigger: GGAAGTGGTAGATAGATGCAAATAGTCTTGTGAAGA...CAGACGGTCCAGGGAACAAAAGGCCAAACAAGAGCGGGAGAAGGAACTGGCGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154418.8 |
||
| 3UTR-3UTR CAA 90 bp | ACAGAGACACACATCCTACCAACTTCTACCCAGAATGCTCAGATTCTAGCTGCTGCTGACCACCAGAAGTaGGTGAGCAGCAGGATTTTT | + |
|
Preference number: 3 (lower is better) Translates to: TETHILPTSTQNAQILAAADHQK*VSSRIF Trigger: AAAAATCCTGCTGCTCACCAACTTCTGGTGGTCAGC...AGCAGCTAGAATCTGAGCATTCTGGGTAGAAGTTGGTAGGATGTGTGTCTCTGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139253.8 |
||
| 3UTR-3UTR CAA 90 bp | TACCTGGCCGAGTTATTTGGACCCTTGTGGATTATCAAGGTTTACAAGTATGAGCCTTCTGGGTTAAAGTaGCCTCATGCTGGGCCTGTG | + |
|
Preference number: 3 (lower is better) Translates to: YLAELFGPLWIIKVYKYEPSGLK*PHAGPV Trigger: CACAGGCCCAGCATGAGGCAACTTTAACCCAGAAGG...CTCATACTTGTAAACCTTGATAATCCACAAGGGTCCAAATAACTCGGCCAGGTA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139253.8 |
||
| 3UTR GCA 72 bp | CATTCCAAAAGTTCTTGGGAGAGACACACAAGGATCTaGCCTGGTTATGAGGAAGTAGGGAGGTTCAAAAGC | + |
|
Preference number: 3 (lower is better) Translates to: HSKSSWERHTRI*PGYEEVGRFKS Trigger: GCTTTTGAACCTCCCTACTTCCTCATAACCAGGGCAGATCCTTGTGTGTCTCTCCCAAGAACTTTTGGAATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000139253.8 |
||
| 3UTR CCA 72 bp | GAGGCTTCCTACCTGGCCGAGTTATTTGGACCCTTGTaGATTATCAAGGTTTACAAGTATGAGTTCCAGGTG | + |
|
Preference number: 3 (lower is better) Translates to: EASYLAELFGPL*IIKVYKYEFQV Trigger: CACCTGGAACTCATACTTGTAAACCTTGATAATCCACAAGGGTCCAAATAACTCGGCCAGGTAGGAAGCCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139253.8 |
||
| 3UTR CCA 72 bp | AAACCTCTTTCTTTCACAGCAACGAGGCTTCCTACCTaGCCGAGTTATTTGGACCCTTGTGGATTATCAAGG | + |
|
Preference number: 3 (lower is better) Translates to: KPLSFTATRLPT*PSYLDPCGLSR Trigger: CCTTGATAATCCACAAGGGTCCAAATAACTCGGCCAGGTAGGAAGCCTCGTTGCTGTGAAAGAAAGAGGTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139253.8 |
||
| 3UTR-3UTR CAA 90 bp | ATATGCTGGAGCAAGAATTTGAACCCAGGTGTGCCTCCACTTCTTACACCAGGTAAAGACCTACAGAGATaGAAGATTTGGGTCTGCTCT | + |
|
Preference number: 3 (lower is better) Translates to: ICWSKNLNPGVPPLLTPGKDLQR*KIWVCS Trigger: AGAGCAGACCCAAATCTTCAATCTCTGTAGGTCTTT...ACCTGGTGTAAGAAGTGGAGGCACACCTGGGTTCAAATTCTTGCTCCAGCATAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139253.8 |
||
| 3UTR-3UTR CAA 90 bp | GGCTTCCTACCTGGCCGAGTTATTTGGACCCTTGTGGATTATCAAGGTTTACAATCAAAACGTGTTGCCTaGTTTTACAGAAGCCCTCAG | + |
|
Preference number: 3 (lower is better) Translates to: GFLPGRVIWTLVDYQGLQSKRVA*FYRSPQ Trigger: CTGAGGGCTTCTGTAAAACAAGGCAACACGTTTTGA...TTGTAAACCTTGATAATCCACAAGGGTCCAAATAACTCGGCCAGGTAGGAAGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000139253.8 |
||
| 3UTR-3UTR CAA 90 bp | GGCCCAAGGTTTAAAAACCTCTTTCTTTCACAGCAACGAGGCTTCCTACCTGGCGAGTTATTTGGACCCTaGTGGATTATCAAGGTTTAC | + |
|
Preference number: 3 (lower is better) Translates to: GPRFKNLFLSQQRGFLPGELFGP*WIIKVY Trigger: GTAAACCTTGATAATCCACAAGGGTCCAAATAACTC...GCCAGGTAGGAAGCCTCGTTGCTGTGAAAGAAAGAGGTTTTTAAACCTTGGGCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000139253.8 |
||
| 3UTR GCA 72 bp | AAAGCGACTGTCCAATGGGCGAAAATCCCGAGAAGCTaGTGTTTCTCGTCAGTTTTTCCAATACTGGATCTA | + |
|
Preference number: 3 (lower is better) Translates to: KATVQWAKIPRS*CFSSVFPILDL Trigger: TAGATCCAGTATTGGAAAAACTGACGAGAAACAGCAGCTTCTCGGGATTTTCGCCCATTGGACAGTCGCTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000154418.8 |
||
| 3UTR CCA 72 bp | CAGACAGAAGGATGGAGGGTTTGGGAATTTGACCATTaGTTAACCCCACACCCTTTGAAAAACTCTGCATTG | + |
|
Preference number: 3 (lower is better) Translates to: QTEGWRVWEFDH*LTPHPLKNSAL Trigger: CAATGCAGAGTTTTTCAAAGGGTGTGGGGTTAACCAATGGTCAAATTCCCAAACCCTCCATCCTTCTGTCTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000154418.8 |
||
| 3UTR-3UTR CAA 90 bp | CTTTCTTTCACAGCAACGAGGCTTCCTACCTGGCCGAGTTATTTGGACCCTTGTCATAAAAACTGGCTCTaGATCTGTAGTAACAAACTG | + |
|
Preference number: 3 (lower is better) Translates to: LSFTATRLPTWPSYLDPCHKNWL*ICSNKL Trigger: CAGTTTGTTACTACAGATCAAGAGCCAGTTTTTATG...ACAAGGGTCCAAATAACTCGGCCAGGTAGGAAGCCTCGTTGCTGTGAAAGAAAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000139253.8 |
||
| 3UTR CCA 72 bp | AACACTGCCATGGCATCAGTACTGCCACATAAAAACTaGCTCTTGATCTGTAGTAACAAACTGGGAGACAGA | + |
|
Preference number: 3 (lower is better) Translates to: NTAMASVLPHKN*LLICSNKLGDR Trigger: TCTGTCTCCCAGTTTGTTACTACAGATCAAGAGCCAGTTTTTATGTGGCAGTACTGATGCCATGGCAGTGTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000139253.8 |
||
| 3UTR-3UTR CAA 90 bp | ACAGAGACACACATCCTACCAACTTCTACCCAGAATGCTCAGATTCTAGCTGCTACATCTCACCAAAGTTaGCATAGCCAGTTATATGCT | + |
|
Preference number: 3 (lower is better) Translates to: TETHILPTSTQNAQILAATSHQS*HSQLYA Trigger: AGCATATAACTGGCTATGCAAACTTTGGTGAGATGT...AGCAGCTAGAATCTGAGCATTCTGGGTAGAAGTTGGTAGGATGTGTGTCTCTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139253.8 |
||
| 3UTR TCA 72 bp | ATTTGGACCCTTGTGGATTATCAAGGTTTACAAGTATaGGTTCCAGGTGAGCATCAAGAGCTCAAAACCCCA | + |
|
Preference number: 3 (lower is better) Translates to: IWTLVDYQGLQV*VPGEHQELKTP Trigger: TGGGGTTTTGAGCTCTTGATGCTCACCTGGAACTCATACTTGTAAACCTTGATAATCCACAAGGGTCCAAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000139253.8 |
||
| 3UTR TCA 72 bp | AAAGAATGTTTAAAATGCACAGACTTTAGGGGCCTCTaGGTGCACAATACCCTCCAGAAGGATGTTGACAGT | + |
|
Preference number: 3 (lower is better) Translates to: KECLKCTDFRGL*VHNTLQKDVDS Trigger: ACTGTCAACATCCTTCTGGAGGGTATTGTGCACTCAGAGGCCCCTAAAGTCTGTGCATTTTAAACATTCTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000139253.8 |
||
| 3UTR GCA 72 bp | CACAGAGACACACATCCTACCAACTTCTACCCAGAATaGTCAGATTCTAGCTGCTGTTTCCTTTTATTGAGT | + |
|
Preference number: 3 (lower is better) Translates to: HRDTHPTNFYPE*SDSSCCFLLLS Trigger: ACTCAATAAAAGGAAACAGCAGCTAGAATCTGAGCATTCTGGGTAGAAGTTGGTAGGATGTGTGTCTCTGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139253.8 |
||
| 3UTR-3UTR CAA 90 bp | AAAAACAGCAAAACAGAACACTTTATTTCAGTCAGTCAGTCAGTCCAGAATGTCTTCCTTCTCCCGCTCTaGTTTGGCCTTTTGTTCCCT | + |
|
Preference number: 3 (lower is better) Translates to: KNSKTEHFISVSQSVQNVFLLPL*FGLLFP Trigger: AGGGAACAAAAGGCCAAACAAGAGCGGGAGAAGGAA...GACATTCTGGACTGACTGACTGACTGAAATAAAGTGTTCTGTTTTGCTGTTTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000148575.2 |
||
| 3UTR-3UTR CAA 90 bp | GTCAGGGAAAGACCTACAGAGATTGAAGATTTGGGTCTGCTCTTAGCAATCAAAGTTTTAATCCTGGTCTaGAGGTCAAAGGAAATGGAA | + |
|
Preference number: 3 (lower is better) Translates to: VRERPTEIEDLGLLLAIKVLILV*RSKEME Trigger: TTCCATTTCCTTTGACCTCAAGACCAGGATTAAAAC...TTTGATTGCTAAGAGCAGACCCAAATCTTCAATCTCTGTAGGTCTTTCCCTGAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139253.8 |
||
| 3UTR-3UTR CAA 90 bp | GTTCCTAAGAGCAATCCTTTCACACATAGAGACACACACATGGAATTCTGTCCATTTGTGTTTAATTTTTaGGATGGGGATGGGATAGAG | + |
|
Preference number: 3 (lower is better) Translates to: VPKSNPFTHRDTHMEFCPFVFNF*DGDGIE Trigger: CTCTATCCCATCCCCATCCAAAAAATTAAACACAAA...TGGACAGAATTCCATGTGTGTGTCTCTATGTGTGAAAGGATTGCTCTTAGGAAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000154418.8 |
||
| CDS-3UTR GCA 90 bp | CCTGGACCGTCTGTCTCCAATGACGGACATAGCCGTTTCAAGATTCGAACTCTGGAAGAAAGAACACTCTaGTTGCGGGCGGCAGCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: PGPSVSNDGHSRFKIRTLEERTL*LRAAAE Trigger: TTCTGCTGCCGCCCGCAAGCAGAGTGTTCTTTCTTC...CAGAGTTCGAATCTTGAAACGGCTATGTCCGTCATTGGAGACAGACGGTCCAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154418.8 |
||
| CDS-3UTR GCA 90 bp | CCCAACAACCCTCCCCCAAACACAGAGACACACATCCTACCAACTTCTACCCAGTTAACCGAGTCGCTCTaGTTCTTCATGTTCTTCTGG | + |
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Preference number: 4 (lower is better) Translates to: PNNPPPNTETHILPTSTQLTESL*FFMFFW Trigger: CCAGAAGAACATGAAGAAGCAGAGCGACTCGGTTAA...CTGGGTAGAAGTTGGTAGGATGTGTGTCTCTGTGTTTGGGGGAGGGTTGTTGGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000139253.8 |
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| CDS-3UTR GCA 90 bp | ATAGTTCTTAGAGGACTCCTCTGCCATATAACTGGAGTGCTTTTCCGGTTGCAATATATTCCCACCCTCTaGTTGCGGGCGGCAGCAGAA | + |
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Preference number: 4 (lower is better) Translates to: IVLRGLLCHITGVLFRLQYIPTL*LRAAAE Trigger: TTCTGCTGCCGCCCGCAAGCAGAGGGTGGGAATATA...TTGCAACCGGAAAAGCACTCCAGTTATATGGCAGAGGAGTCCTCTAAGAACTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110615.8 |
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| CDS-3UTR GCA 90 bp | CGTCTGTCTCCAATGACGGACATAGCCGTTTCAAGATTCGAACTCTGGATCTCCTTAACCGAGTCGCTCTaGTTCTTCATGTTCTTCTGG | + |
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Preference number: 4 (lower is better) Translates to: RLSPMTDIAVSRFELWISLTESL*FFMFFW Trigger: CCAGAAGAACATGAAGAAGCAGAGCGACTCGGTTAA...GGAGATCCAGAGTTCGAATCTTGAAACGGCTATGTCCGTCATTGGAGACAGACG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000148575.2 ENSMUST00000154418.8 |
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| CDS-3UTR GCA 90 bp | GACCGTCTGTCTCCAATGACGGACATAGCCGTTTCAAGATTCGAACTCTGGATCTTAACCGAGTCGCTCTaGTTCTTCATGTTCTTCTGG | + |
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Preference number: 4 (lower is better) Translates to: DRLSPMTDIAVSRFELWILTESL*FFMFFW Trigger: CCAGAAGAACATGAAGAAGCAGAGCGACTCGGTTAA...GATCCAGAGTTCGAATCTTGAAACGGCTATGTCCGTCATTGGAGACAGACGGTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000148575.2 ENSMUST00000154418.8 |
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| CDS-3UTR GCA 90 bp | GTTCCTAAGAGCAATCCTTTCACACATAGAGACACACACATGGAATTCTGTCCAAAAGAACACTCTGCTTaGGGGCGGCAGCAGAAAGCC | + |
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Preference number: 4 (lower is better) Translates to: VPKSNPFTHRDTHMEFCPKEHSA*GRQQKA Trigger: GGCTTTCTGCTGCCGCCCGCAAGCAGAGTGTTCTTT...TGGACAGAATTCCATGTGTGTGTCTCTATGTGTGAAAGGATTGCTCTTAGGAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000154418.8 |
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| CDS-3UTR TCA 90 bp | GACCGTCTGTCTCCAATGACGGACATAGCCGTTTCAAGATTCGAACTCTGGATCAAAGAAACTCCAGGATaGAGAAAGAACACTCTGCTT | + |
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Preference number: 4 (lower is better) Translates to: DRLSPMTDIAVSRFELWIKETPG*RKNTLL Trigger: AAGCAGAGTGTTCTTTCTTCATCCTGGAGTTTCTTT...GATCCAGAGTTCGAATCTTGAAACGGCTATGTCCGTCATTGGAGACAGACGGTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154418.8 |
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| 3UTR CAA 72 bp | AACGAGGCTTCCTACCTGGCCGAGTTATTTGGACCCTaGTGGATTATCAAGGTTTACAAGTATGAGTTCCAG | + |
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Preference number: 4 (lower is better) Translates to: NEASYLAELFGP*WIIKVYKYEFQ Trigger: CTGGAACTCATACTTGTAAACCTTGATAATCCACAAGGGTCCAAATAACTCGGCCAGGTAGGAAGCCTCGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139253.8 |
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| 3UTR CAA 72 bp | TTCACAGCAACGAGGCTTCCTACCTGGCCGAGTTATTaGGACCCTTGTGGATTATCAAGGTTTACAAGTATG | + |
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Preference number: 4 (lower is better) Translates to: FTATRLPTWPSY*DPCGLSRFTSM Trigger: CATACTTGTAAACCTTGATAATCCACAAGGGTCCAAATAACTCGGCCAGGTAGGAAGCCTCGTTGCTGTGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139253.8 |
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| CDS-3UTR GCA 90 bp | ATAGTTCTTAGAGGACTCCTCTGCCATATAACTGGAGTGCTTTTCCGGTTGCAATTAACCGAGTCGCTCTaGTTCTTCATGTTCTTCTGG | + |
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Preference number: 4 (lower is better) Translates to: IVLRGLLCHITGVLFRLQLTESL*FFMFFW Trigger: CCAGAAGAACATGAAGAAGCAGAGCGACTCGGTTAA...TTGCAACCGGAAAAGCACTCCAGTTATATGGCAGAGGAGTCCTCTAAGAACTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110615.8 ENSMUST00000139253.8 |
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| CDS-3UTR GCA 90 bp | CAGCAAAACAGAACACTTTATTTCAGTCAGTCAGTCAGTCCAGAATGTCTAAAATGTCTTGAGAAGCTCTaGTTGCGGGCGGCAGCAGAA | + |
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Preference number: 4 (lower is better) Translates to: QQNRTLYFSQSVSPECLKCLEKL*LRAAAE Trigger: TTCTGCTGCCGCCCGCAAGCAGAGCTTCTCAAGACA...TTTTAGACATTCTGGACTGACTGACTGACTGAAATAAAGTGTTCTGTTTTGCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000148575.2 |
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| 3UTR CAA 72 bp | TCACACTGTCTTAAAGCCATTTCAAAACGTGTTGCCTaGTTTTACAGAAGCCCTCAGTCTGTTTCTGCTGCC | + |
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Preference number: 4 (lower is better) Translates to: SHCLKAISKRVA*FYRSPQSVSAA Trigger: GGCAGCAGAAACAGACTGAGGGCTTCTGTAAAACAAGGCAACACGTTTTGAAATGGCTTTAAGACAGTGTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000139253.8 |
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| CDS-3UTR CAA 90 bp | CCGTCTGTCTCCAATGACGGACATAGCCGTTTCAAGATTCGAACTCTGGATCTCGAAAGAACACTCTGCTaGCGGGCGGCAGCAGAAAGC | + |
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Preference number: 5 (lower is better) Translates to: PSVSNDGHSRFKIRTLDLERTLC*RAAAES Trigger: GCTTTCTGCTGCCGCCCGCAAGCAGAGTGTTCTTTC...GAGATCCAGAGTTCGAATCTTGAAACGGCTATGTCCGTCATTGGAGACAGACGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154418.8 |
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| CDS-3UTR CAA 90 bp | CAGCAAAACAGAACACTTTATTTCAGTCAGTCAGTCAGTCCAGAATGTCTAAAACTTGAGAAGCTCTGCTaGCGGGCGGCAGCAGAAAGC | + |
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Preference number: 5 (lower is better) Translates to: QQNRTLYFSQSVSPECLKLEKLC*RAAAES Trigger: GCTTTCTGCTGCCGCCCGCAAGCAGAGCTTCTCAAG...TTTTAGACATTCTGGACTGACTGACTGACTGAAATAAAGTGTTCTGTTTTGCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000148575.2 |
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