Pregenerated sensors for SERAC1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000015659Ensembl transcript IDs: ENSMUST00000024570.6, ENSMUST00000097432.10
Found 157 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GCTGGGACAGTCTCAGGTGGTCGGGCCCTCTGGCCACAGCAGCTCTaGTCCCTACCCCAAGGCCCAGCACAAGGAGTTTCTCAATGTAAG | + |
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Preference number: 1 (lower is better) Translates to: AGTVSGGRALWPQQL*SLPQGPAQGVSQCK Trigger: CTTACATTGAGAAACTCCTTGTGCTGGGCCTTGGGGTAGGGAGCAGAGCTGCTGTGGCCAGAGGGCCCGACCACCTGAGACTGTCCCAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097432.10 |
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| 3UTR CCA 90 bp | TGTTCACTAGGCAATCTCGCAGAGAGGGAAAGCAATAGTGTTTCCTaGGGTTGGGGTCGGAGGAGGGGACTGCCTGCTGGTGAGAGAGCT | + |
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Preference number: 1 (lower is better) Translates to: CSLGNLAERESNSVS*GWGRRRGLPAGERA Trigger: AGCTCTCTCACCAGCAGGCAGTCCCCTCCTCCGACCCCAACCCCAGGAAACACTATTGCTTTCCCTCTCTGCGAGATTGCCTAGTGAACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097432.10 |
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| 3UTR CCA 90 bp | GGTTTCAGTCAGTCATCACCGGTCCCATGGCGAGACAGGGCATCATaGGAGAATGGGCAAAACTGCTCACTGCAAGGCAGGGAGGAAGCA | + |
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Preference number: 1 (lower is better) Translates to: GFSQSSPVPWRDRAS*ENGQNCSLQGREEA Trigger: TGCTTCCTCCCTGCCTTGCAGTGAGCAGTTTTGCCCATTCTCCCATGATGCCCTGTCTCGCCATGGGACCGGTGATGACTGACTGAAACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097432.10 |
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| 3UTR TCA 90 bp | GTCGGAGGAGGGGACTGCCTGCTGGTGAGAGAGCTGCTTTGGGGATaGCACAATCCACTGAAATTGGACAGTGGTGATAGTAACTTTGAA | + |
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Preference number: 1 (lower is better) Translates to: VGGGDCLLVRELLWG*HNPLKLDSGDSNFE Trigger: TTCAAAGTTACTATCACCACTGTCCAATTTCAGTGGATTGTGTCATCCCCAAAGCAGCTCTCTCACCAGCAGGCAGTCCCCTCCTCCGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097432.10 |
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| 3UTR TCA 90 bp | ACAACGATCATCAGCACACGTTCCCACCCTCCCTCTAAGGGGGCATaGAGGGAAGCTGTACTTTACATAGCCAGAAAATTGGAGAGGCTT | + |
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Preference number: 1 (lower is better) Translates to: TTIISTRSHPPSKGA*REAVLYIARKLERL Trigger: AAGCCTCTCCAATTTTCTGGCTATGTAAAGTACAGCTTCCCTTCATGCCCCCTTAGAGGGAGGGTGGGAACGTGTGCTGATGATCGTTGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000097432.10 |
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| 3UTR GCA 90 bp | GGGTCCTTCTGCAGCTACCGTGTGTCTGTGCCGTCTTTAAGGCGCTaGTGTTTTGCAGTTATCTTGTGCTCATTGGTTTCAATGATGTCT | + |
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Preference number: 1 (lower is better) Translates to: GSFCSYRVSVPSLRR*CFAVILCSLVSMMS Trigger: AGACATCATTGAAACCAATGAGCACAAGATAACTGCAAAACAGCAGCGCCTTAAAGACGGCACAGACACACGGTAGCTGCAGAAGGACCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097432.10 |
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| 3UTR-3UTR GCA 90 bp | CTCAGGTGGTCGGGCCCTCTGGCCACAGCAGCTCTGCTCCCTACCCCAAGGCCCCTGCGCTCTGCTGCCTaGACCCCACACGCAGTGAGT | + |
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Preference number: 2 (lower is better) Translates to: LRWSGPLATAALLPTPRPLRSAA*TPHAVS Trigger: ACTCACTGCGTGTGGGGTGCAGGCAGCAGAGCGCAG...GGGCCTTGGGGTAGGGAGCAGAGCTGCTGTGGCCAGAGGGCCCGACCACCTGAG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000097432.10 |
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| 3UTR-3UTR TCA 90 bp | AACCCAATCGTTCTCAGCACTGTGAGAAACCCAGAAGCAGAGCCTGGCCCGCACGCACCCCACACGCAGTaGGTGCACAGGACTGCGGAG | + |
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Preference number: 2 (lower is better) Translates to: NPIVLSTVRNPEAEPGPHAPHTQ*VHRTAE Trigger: CTCCGCAGTCCTGTGCACTCACTGCGTGTGGGGTGC...GTGCGGGCCAGGCTCTGCTTCTGGGTTTCTCACAGTGCTGAGAACGATTGGGTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097432.10 |
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| 3UTR-3UTR CCA 90 bp | CTTGCCTGTCAGGACTCTTGGGTGAGCTGGGACAGTCTCAGGTGGTCGGGCCCTGTAAGCCTTCCTCTGTaGCCTCCAGGTGTACTCGGG | + |
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Preference number: 2 (lower is better) Translates to: LACQDSWVSWDSLRWSGPVSLPL*PPGVLG Trigger: CCCGAGTACACCTGGAGGCCACAGAGGAAGGCTTAC...AGGGCCCGACCACCTGAGACTGTCCCAGCTCACCCAAGAGTCCTGACAGGCAAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097432.10 |
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| 3UTR-3UTR CCA 90 bp | CATGTTCACCTCGATGACAAACACCTGGGCAGCAGAGGTCAAGGAGAAAAGATGGGTGGTCGGGCCCTCTaGCCACAGCAGCTCTGCTCC | + |
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Preference number: 2 (lower is better) Translates to: HVHLDDKHLGSRGQGEKMGGRAL*PQQLCS Trigger: GGAGCAGAGCTGCTGTGGCCAGAGGGCCCGACCACC...CATCTTTTCTCCTTGACCTCTGCTGCCCAGGTGTTTGTCATCGAGGTGAACATG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097432.10 |
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| 3UTR-3UTR GCA 90 bp | CATGTTCACCTCGATGACAAACACCTGGGCAGCAGAGGTCAAGGAGAAAAGATGGCTTGCGTGAAGAGCTaGGCTCTGCTGCCTGCACCC | + |
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Preference number: 2 (lower is better) Translates to: HVHLDDKHLGSRGQGEKMACVKS*ALLPAP Trigger: GGGTGCAGGCAGCAGAGCGCAGCTCTTCACGCAAGC...CATCTTTTCTCCTTGACCTCTGCTGCCCAGGTGTTTGTCATCGAGGTGAACATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097432.10 |
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| 3UTR-3UTR TCA 90 bp | ATTACTAAAACTCAACAACGATCATCAGCACACGTTCCCACCCTCCCTCTAAGGCTCCCAGTGCTTGCGTaGAGAGCTGCGCTCTGCTGC | + |
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Preference number: 2 (lower is better) Translates to: ITKTQQRSSAHVPTLPLRLPVLA*RAALCC Trigger: GCAGCAGAGCGCAGCTCTTCACGCAAGCACTGGGAG...CCTTAGAGGGAGGGTGGGAACGTGTGCTGATGATCGTTGTTGAGTTTTAGTAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097432.10 |
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| 3UTR-3UTR GCA 90 bp | ATTACTAAAACTCAACAACGATCATCAGCACACGTTCCCACCCTCCCTCTAAGGTGGCCACAGCAGCTCTaGTCCCTACCCCAAGGCCCA | + |
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Preference number: 2 (lower is better) Translates to: ITKTQQRSSAHVPTLPLRWPQQL*SLPQGP Trigger: TGGGCCTTGGGGTAGGGAGCAGAGCTGCTGTGGCCA...CCTTAGAGGGAGGGTGGGAACGTGTGCTGATGATCGTTGTTGAGTTTTAGTAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097432.10 |
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| 3UTR-3UTR GCA 90 bp | CCCTGTAAAAGTGTCAACTGTGCACCTGGCATATTGACATTAAAAGCTGGCAGTTCGGGCATCTCCCAGTaGTTGCGTGAAGAGCTGCGC | + |
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Preference number: 2 (lower is better) Translates to: PCKSVNCAPGILTLKAGSSGISQ*LREELR Trigger: GCGCAGCTCTTCACGCAAGCACTGGGAGATGCCCGA...ACTGCCAGCTTTTAATGTCAATATGCCAGGTGCACAGTTGACACTTTTACAGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097432.10 |
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| 3UTR-3UTR GCA 90 bp | TTTGTTCAGGATGATTCCGCCAGTGTTGGATTTGTTCCATCTTGCTCTATTATCGTCGGAGGAGGGGACTaGCTGCTGGTGAGAGAGCTG | + |
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Preference number: 2 (lower is better) Translates to: FVQDDSASVGFVPSCSIIVGGGD*LLVREL Trigger: CAGCTCTCTCACCAGCAGGCAGTCCCCTCCTCCGAC...GATAATAGAGCAAGATGGAACAAATCCAACACTGGCGGAATCATCCTGAACAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097432.10 |
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| 3UTR-3UTR CCA 90 bp | TTTGTTCAGGATGATTCCGCCAGTGTTGGATTTGTTCCATCTTGCTCTATTATCTGGGACAGTCTCAGGTaGTCGGGCCCTCTGGCCACA | + |
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Preference number: 2 (lower is better) Translates to: FVQDDSASVGFVPSCSIIWDSLR*SGPLAT Trigger: TGTGGCCAGAGGGCCCGACCACCTGAGACTGTCCCA...GATAATAGAGCAAGATGGAACAAATCCAACACTGGCGGAATCATCCTGAACAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097432.10 |
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| 3UTR-3UTR TCA 90 bp | TCTTTAAGGCGCTGCTGTTTTGCAGTTATCTTGTGCTCATTGGTTTCAATGATGGGGACTGCCTGCTGGTaGGAGAGCTGCTTTGGGGAT | + |
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Preference number: 2 (lower is better) Translates to: SLRRCCFAVILCSLVSMMGTACW*ESCFGD Trigger: ATCCCCAAAGCAGCTCTCTCACCAGCAGGCAGTCCC...CATCATTGAAACCAATGAGCACAAGATAACTGCAAAACAGCAGCGCCTTAAAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000097432.10 |
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| 3UTR-3UTR TCA 90 bp | TCTTTAAGGCGCTGCTGTTTTGCAGTTATCTTGTGCTCATTGGTTTCAATGATGGTCAGGACTCTTGGGTaGGCTGGGACAGTCTCAGGT | + |
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Preference number: 2 (lower is better) Translates to: SLRRCCFAVILCSLVSMMVRTLG*AGTVSG Trigger: ACCTGAGACTGTCCCAGCTCACCCAAGAGTCCTGAC...CATCATTGAAACCAATGAGCACAAGATAACTGCAAAACAGCAGCGCCTTAAAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097432.10 |
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| 3UTR-3UTR CCA 90 bp | GAGAGAGGCAGAAAGAGTGATGCAAGAAAGAACCATTGTGCTAAGAGCACCACGGACCTTAACAACAGATaGAGAATGCCACGTTTCTCG | + |
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Preference number: 2 (lower is better) Translates to: ERGRKSDARKNHCAKSTTDLNNR*RMPRFS Trigger: CGAGAAACGTGGCATTCTCCATCTGTTGTTAAGGTC...CGTGGTGCTCTTAGCACAATGGTTCTTTCTTGCATCACTCTTTCTGCCTCTCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097432.10 |
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| 3UTR-3UTR TCA 90 bp | TCTTTAAGGCGCTGCTGTTTTGCAGTTATCTTGTGCTCATTGGTTTCAATGATGTCGTTCTCAGCACTGTaGGAAACCCAGAAGCAGAGC | + |
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Preference number: 2 (lower is better) Translates to: SLRRCCFAVILCSLVSMMSFSAL*ETQKQS Trigger: GCTCTGCTTCTGGGTTTCTCACAGTGCTGAGAACGA...CATCATTGAAACCAATGAGCACAAGATAACTGCAAAACAGCAGCGCCTTAAAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097432.10 |
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| 3UTR-3UTR CCA 90 bp | ATTACTAAAACTCAACAACGATCATCAGCACACGTTCCCACCCTCCCTCTAAGGCAAGTTTCATTCTCATaGTGTGCTAGCTTGCCTGTC | + |
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Preference number: 2 (lower is better) Translates to: ITKTQQRSSAHVPTLPLRQVSFS*CASLPV Trigger: GACAGGCAAGCTAGCACACCATGAGAATGAAACTTG...CCTTAGAGGGAGGGTGGGAACGTGTGCTGATGATCGTTGTTGAGTTTTAGTAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097432.10 |
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| 3UTR-3UTR CCA 90 bp | TTTGTTCAGGATGATTCCGCCAGTGTTGGATTTGTTCCATCTTGCTCTATTATCTCGATGACAAACACCTaGGCAGCAGAGGTCAAGGAG | + |
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Preference number: 2 (lower is better) Translates to: FVQDDSASVGFVPSCSIISMTNT*AAEVKE Trigger: CTCCTTGACCTCTGCTGCCCAGGTGTTTGTCATCGA...GATAATAGAGCAAGATGGAACAAATCCAACACTGGCGGAATCATCCTGAACAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097432.10 |
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| 3UTR-3UTR CCA 90 bp | TTTGTTCAGGATGATTCCGCCAGTGTTGGATTTGTTCCATCTTGCTCTATTATCGGCAGTAAAACATCATaGCACATGGTACCCAGATCA | + |
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Preference number: 2 (lower is better) Translates to: FVQDDSASVGFVPSCSIIGSKTS*HMVPRS Trigger: TGATCTGGGTACCATGTGCCATGATGTTTTACTGCC...GATAATAGAGCAAGATGGAACAAATCCAACACTGGCGGAATCATCCTGAACAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097432.10 |
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| 3UTR-3UTR CCA 90 bp | TTTGTTCAGGATGATTCCGCCAGTGTTGGATTTGTTCCATCTTGCTCTATTATCAGCCTTTGTGATAAATaGAGAGTGGCCTTTCCATCA | + |
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Preference number: 2 (lower is better) Translates to: FVQDDSASVGFVPSCSIISLCDK*RVAFPS Trigger: TGATGGAAAGGCCACTCTCCATTTATCACAAAGGCT...GATAATAGAGCAAGATGGAACAAATCCAACACTGGCGGAATCATCCTGAACAAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097432.10 |
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| 3UTR CAA 90 bp | AGGAACGTAAGGGCCTCTCTTCACCAAAATATTTTTAGTTGTGGATaGTTTGTAGATCCTCCAAATGTACCCATAAATTATCATCAGCAT | + |
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Preference number: 2 (lower is better) Translates to: RNVRASLHQNIFSCG*FVDPPNVPINYHQH Trigger: ATGCTGATGATAATTTATGGGTACATTTGGAGGATCTACAAACAATCCACAACTAAAAATATTTTGGTGAAGAGAGGCCCTTACGTTCCT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000097432.10 |
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| 3UTR TCA 72 bp | CCTCCAGGTGTACTCGGGCATCTCCCAGTGCTTGCGTaGAGAGCTGCGCTCTGCTGCCTGCACCCCACACGC | + |
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Preference number: 3 (lower is better) Translates to: PPGVLGHLPVLA*RAALCCLHPTR Trigger: GCGTGTGGGGTGCAGGCAGCAGAGCGCAGCTCTTCACGCAAGCACTGGGAGATGCCCGAGTACACCTGGAGG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097432.10 |
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| 3UTR GCA 72 bp | GTGGCCTCCAGGTGTACTCGGGCATCTCCCAGTGCTTaGGTGAAGAGCTGCGCTCTGCTGCCTGCACCCCAC | + |
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Preference number: 3 (lower is better) Translates to: VASRCTRASPSA*VKSCALLPAPH Trigger: GTGGGGTGCAGGCAGCAGAGCGCAGCTCTTCACGCAAGCACTGGGAGATGCCCGAGTACACCTGGAGGCCAC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097432.10 |
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| 3UTR GCA 72 bp | TCCCAGTGCTTGCGTGAAGAGCTGCGCTCTGCTGCCTaGACCCCACACGCAGTGAGTGCACAGGACTGCGGA | + |
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Preference number: 3 (lower is better) Translates to: SQCLREELRSAA*TPHAVSAQDCG Trigger: TCCGCAGTCCTGTGCACTCACTGCGTGTGGGGTGCAGGCAGCAGAGCGCAGCTCTTCACGCAAGCACTGGGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097432.10 |
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| 3UTR GCA 72 bp | CTCTGTGGCCTCCAGGTGTACTCGGGCATCTCCCAGTaGTTGCGTGAAGAGCTGCGCTCTGCTGCCTGCACC | + |
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Preference number: 3 (lower is better) Translates to: LCGLQVYSGISQ*LREELRSAACT Trigger: GGTGCAGGCAGCAGAGCGCAGCTCTTCACGCAAGCACTGGGAGATGCCCGAGTACACCTGGAGGCCACAGAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097432.10 |
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| 3UTR CCA 72 bp | TGTCAGGACTCTTGGGTGAGCTGGGACAGTCTCAGGTaGTCGGGCCCTCTGGCCACAGCAGCTCTGCTCCCT | + |
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Preference number: 3 (lower is better) Translates to: CQDSWVSWDSLR*SGPLATAALLP Trigger: AGGGAGCAGAGCTGCTGTGGCCAGAGGGCCCGACCACCTGAGACTGTCCCAGCTCACCCAAGAGTCCTGACA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097432.10 |
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| 3UTR-3UTR CAA 90 bp | CTTGCCTGTCAGGACTCTTGGGTGAGCTGGGACAGTCTCAGGTGGTCGGGCCCTGGCATCTCCCAGTGCTaGCGTGAAGAGCTGCGCTCT | + |
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Preference number: 3 (lower is better) Translates to: LACQDSWVSWDSLRWSGPGISQC*REELRS Trigger: AGAGCGCAGCTCTTCACGCAAGCACTGGGAGATGCC...AGGGCCCGACCACCTGAGACTGTCCCAGCTCACCCAAGAGTCCTGACAGGCAAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097432.10 |
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| 3UTR CCA 72 bp | CGTTCTCAGCACTGTGAGAAACCCAGAAGCAGAGCCTaGCCCGCACATACAAGCAGGCACAGGAGCCCCTGT | + |
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Preference number: 3 (lower is better) Translates to: RSQHCEKPRSRA*PAHTSRHRSPC Trigger: ACAGGGGCTCCTGTGCCTGCTTGTATGTGCGGGCCAGGCTCTGCTTCTGGGTTTCTCACAGTGCTGAGAACG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097432.10 |
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| 3UTR CCA 72 bp | CTCGCAGAGAGGGAAAGCAATAGTGTTTCCTGGGGTTaGGGTCGGAGGAGGGGACTGCCTGCTGGTGAGAGA | + |
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Preference number: 3 (lower is better) Translates to: LAERESNSVSWG*GRRRGLPAGER Trigger: TCTCTCACCAGCAGGCAGTCCCCTCCTCCGACCCCAACCCCAGGAAACACTATTGCTTTCCCTCTCTGCGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097432.10 |
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| 3UTR CCA 72 bp | GGCAATCTCGCAGAGAGGGAAAGCAATAGTGTTTCCTaGGGTTGGGGTCGGAGGAGGGGACTGCCTGCTGGT | + |
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Preference number: 3 (lower is better) Translates to: GNLAERESNSVS*GWGRRRGLPAG Trigger: ACCAGCAGGCAGTCCCCTCCTCCGACCCCAACCCCAGGAAACACTATTGCTTTCCCTCTCTGCGAGATTGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097432.10 |
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| 3UTR TCA 72 bp | AAGAGCTGCGCTCTGCTGCCTGCACCCCACACGCAGTaGGTGCACAGGACTGCGGAGACCTTAACAACAGAT | + |
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Preference number: 3 (lower is better) Translates to: KSCALLPAPHTQ*VHRTAETLTTD Trigger: ATCTGTTGTTAAGGTCTCCGCAGTCCTGTGCACTCACTGCGTGTGGGGTGCAGGCAGCAGAGCGCAGCTCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097432.10 |
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| 3UTR GCA 72 bp | GCTGCCTGCACCCCACACGCAGTGAGTGCACAGGACTaGGGAGACCTTAACAACAGATGGAGAATGCCACGT | + |
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Preference number: 3 (lower is better) Translates to: AACTPHAVSAQD*GDLNNRWRMPR Trigger: ACGTGGCATTCTCCATCTGTTGTTAAGGTCTCCGCAGTCCTGTGCACTCACTGCGTGTGGGGTGCAGGCAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097432.10 |
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| 3UTR CCA 72 bp | CAGTCATCACCGGTCCCATGGCGAGACAGGGCATCATaGGAGAATGGGCAAAACTGCTCACTGCAAGGCAGG | + |
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Preference number: 3 (lower is better) Translates to: QSSPVPWRDRAS*ENGQNCSLQGR Trigger: CCTGCCTTGCAGTGAGCAGTTTTGCCCATTCTCCCATGATGCCCTGTCTCGCCATGGGACCGGTGATGACTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097432.10 |
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| 3UTR TCA 72 bp | GGGGCTGAGGACATAGCATGCACAAGGTTTCCAGTTTaGTCCCTAGCACCACACACATGCACGTGCGCGCAC | + |
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Preference number: 3 (lower is better) Translates to: GAEDIACTRFPV*SLAPHTCTCAH Trigger: GTGCGCGCACGTGCATGTGTGTGGTGCTAGGGATCAAACTGGAAACCTTGTGCATGCTATGTCCTCAGCCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097432.10 |
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| 3UTR CCA 72 bp | CAGCACAAGGAGTTTCTCAATGTAAGCCTTCCTCTGTaGCCTCCAGGTGTACTCGGGCATCTCCCAGTGCTT | + |
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Preference number: 3 (lower is better) Translates to: QHKEFLNVSLPL*PPGVLGHLPVL Trigger: AAGCACTGGGAGATGCCCGAGTACACCTGGAGGCCACAGAGGAAGGCTTACATTGAGAAACTCCTTGTGCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097432.10 |
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| 3UTR TCA 72 bp | GGGGACTGCCTGCTGGTGAGAGAGCTGCTTTGGGGATaGCACAATCCACTGAAATTGGACAGTGGTGATAGT | + |
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Preference number: 3 (lower is better) Translates to: GDCLLVRELLWG*HNPLKLDSGDS Trigger: ACTATCACCACTGTCCAATTTCAGTGGATTGTGTCATCCCCAAAGCAGCTCTCTCACCAGCAGGCAGTCCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097432.10 |
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| 3UTR TCA 72 bp | ACTCAGGCAGAGCAAATGTCAGGCTTCGCCAACGCTTaGGTTCCTGCCCCTGACCACATCTGTTCATTATGC | + |
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Preference number: 3 (lower is better) Translates to: TQAEQMSGFANA*VPAPDHICSLC Trigger: GCATAATGAACAGATGTGGTCAGGGGCAGGAACTCAAGCGTTGGCGAAGCCTGACATTTGCTCTGCCTGAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097432.10 |
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| 3UTR GCA 72 bp | GATCTCCCCAAGTTTCATTCTCATGGTGTGCTAGCTTaGCTGTCAGGACTCTTGGGTGAGCTGGGACAGTCT | + |
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Preference number: 3 (lower is better) Translates to: DLPKFHSHGVLA*LSGLLGELGQS Trigger: AGACTGTCCCAGCTCACCCAAGAGTCCTGACAGGCAAGCTAGCACACCATGAGAATGAAACTTGGGGAGATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097432.10 |
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| 3UTR TCA 72 bp | ATCAGCACACGTTCCCACCCTCCCTCTAAGGGGGCATaGAGGGAAGCTGTACTTTACATAGCCAGAAAATTG | + |
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Preference number: 3 (lower is better) Translates to: ISTRSHPPSKGA*REAVLYIARKL Trigger: CAATTTTCTGGCTATGTAAAGTACAGCTTCCCTTCATGCCCCCTTAGAGGGAGGGTGGGAACGTGTGCTGAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000097432.10 |
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| 3UTR GCA 72 bp | TGCAGCTACCGTGTGTCTGTGCCGTCTTTAAGGCGCTaGTGTTTTGCAGTTATCTTGTGCTCATTGGTTTCA | + |
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Preference number: 3 (lower is better) Translates to: CSYRVSVPSLRR*CFAVILCSLVS Trigger: TGAAACCAATGAGCACAAGATAACTGCAAAACAGCAGCGCCTTAAAGACGGCACAGACACACGGTAGCTGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097432.10 |
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| 3UTR-3UTR CAA 90 bp | CATGTTCACCTCGATGACAAACACCTGGGCAGCAGAGGTCAAGGAGAAAAGATGTGTGCACCTGGCATATaGACATTAAAAGCTGGCAGT | + |
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Preference number: 3 (lower is better) Translates to: HVHLDDKHLGSRGQGEKMCAPGI*TLKAGS Trigger: ACTGCCAGCTTTTAATGTCAATATGCCAGGTGCACA...CATCTTTTCTCCTTGACCTCTGCTGCCCAGGTGTTTGTCATCGAGGTGAACATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097432.10 |
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| 3UTR CCA 72 bp | TCTACGCCTCACCAAGCCTTTGTGATAAATGGAGAGTaGCCTTTCCATCATATAGACAGAGCAGAAATGCCG | + |
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Preference number: 3 (lower is better) Translates to: STPHQAFVINGE*PFHHIDRAEMP Trigger: CGGCATTTCTGCTCTGTCTATATGATGGAAAGGCCACTCTCCATTTATCACAAAGGCTTGGTGAGGCGTAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097432.10 |
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| 3UTR-3UTR CAA 90 bp | GAGAGAGGCAGAAAGAGTGATGCAAGAAAGAACCATTGTGCTAAGAGCACCACGCACAATCCACTGAAATaGGACAGTGGTGATAGTAAC | + |
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Preference number: 3 (lower is better) Translates to: ERGRKSDARKNHCAKSTTHNPLK*DSGDSN Trigger: GTTACTATCACCACTGTCCAATTTCAGTGGATTGTG...CGTGGTGCTCTTAGCACAATGGTTCTTTCTTGCATCACTCTTTCTGCCTCTCTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097432.10 |
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| 3UTR-3UTR CAA 90 bp | GAGAGAGGCAGAAAGAGTGATGCAAGAAAGAACCATTGTGCTAAGAGCACCACGTACATAGCCAGAAAATaGGAGAGGCTTAATACTGAG | + |
|
Preference number: 3 (lower is better) Translates to: ERGRKSDARKNHCAKSTTYIARK*ERLNTE Trigger: CTCAGTATTAAGCCTCTCCAATTTTCTGGCTATGTA...CGTGGTGCTCTTAGCACAATGGTTCTTTCTTGCATCACTCTTTCTGCCTCTCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097432.10 |
||
| 3UTR TCA 72 bp | TTTTCAGATCGCAGTTTTAAAGCATGTTCACCTCGATaGCAAACACCTGGGCAGCAGAGGTCAAGGAGAAAA | + |
|
Preference number: 3 (lower is better) Translates to: FSDRSFKACSPR*QTPGQQRSRRK Trigger: TTTTCTCCTTGACCTCTGCTGCCCAGGTGTTTGTCATCGAGGTGAACATGCTTTAAAACTGCGATCTGAAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097432.10 |
||
| 3UTR GCA 72 bp | CAGGATGATTCCGCCAGTGTTGGATTTGTTCCATCTTaGTCTATTATCCACCTTGGTGTACGTTATCATCTA | + |
|
Preference number: 3 (lower is better) Translates to: QDDSASVGFVPS*SIIHLGVRYHL Trigger: TAGATGATAACGTACACCAAGGTGGATAATAGAGCAAGATGGAACAAATCCAACACTGGCGGAATCATCCTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097432.10 |
||
| 3UTR GCA 72 bp | CCGTCTTTAAGGCGCTGCTGTTTTGCAGTTATCTTGTaGTCATTGGTTTCAATGATGTCTTTGTTCAGGATG | + |
|
Preference number: 3 (lower is better) Translates to: PSLRRCCFAVIL*SLVSMMSLFRM Trigger: CATCCTGAACAAAGACATCATTGAAACCAATGAGCACAAGATAACTGCAAAACAGCAGCGCCTTAAAGACGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097432.10 |
||
| 3UTR CCA 72 bp | TGTTGGATTTGTTCCATCTTGCTCTATTATCCACCTTaGTGTACGTTATCATCTACGCCTCACCAAGCCTTT | + |
|
Preference number: 3 (lower is better) Translates to: CWICSILLYYPP*CTLSSTPHQAF Trigger: AAAGGCTTGGTGAGGCGTAGATGATAACGTACACCAAGGTGGATAATAGAGCAAGATGGAACAAATCCAACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097432.10 |
||
| 3UTR CAA 72 bp | TGTGGCCTCCAGGTGTACTCGGGCATCTCCCAGTGCTaGCGTGAAGAGCTGCGCTCTGCTGCCTGCACCCCA | + |
|
Preference number: 4 (lower is better) Translates to: CGLQVYSGISQC*REELRSAACTP Trigger: TGGGGTGCAGGCAGCAGAGCGCAGCTCTTCACGCAAGCACTGGGAGATGCCCGAGTACACCTGGAGGCCACA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097432.10 |
||
| CDS-3UTR GCA 90 bp | CTCTGGCCACAGCAGCTCTGCTCCCTACCCCAAGGCCCAGCACAAGGAGTTTCTCAGTCCTCCCTTCTGTaGAGCCAGGCTCTGGCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: LWPQQLCSLPQGPAQGVSQSSLL*SQALAA Trigger: AGCAGCCAGAGCCTGGCTGCACAGAAGGGAGGACTG...AGAAACTCCTTGTGCTGGGCCTTGGGGTAGGGAGCAGAGCTGCTGTGGCCAGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097432.10 |
||
| CDS-3UTR TCA 90 bp | CTCTGGCCACAGCAGCTCTGCTCCCTACCCCAAGGCCCAGCACAAGGAGTTTCTTCCTCCTGCAACAGATaGCACAGTAGGCAGCCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: LWPQQLCSLPQGPAQGVSSSCNR*HSRQPG Trigger: CCCTGGCTGCCTACTGTGTCATCTGTTGCAGGAGGA...AGAAACTCCTTGTGCTGGGCCTTGGGGTAGGGAGCAGAGCTGCTGTGGCCAGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097432.10 |
||
| CDS-3UTR CCA 90 bp | CTCAGGTGGTCGGGCCCTCTGGCCACAGCAGCTCTGCTCCCTACCCCAAGGCCCAGAACATTTCCACTGTaGCTGAGGGAACCTTTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: LRWSGPLATAALLPTPRPRTFPL*LREPFQ Trigger: TTGGAAAGGTTCCCTCAGCCACAGTGGAAATGTTCT...GGGCCTTGGGGTAGGGAGCAGAGCTGCTGTGGCCAGAGGGCCCGACCACCTGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097432.10 |
||
| 3UTR CAA 72 bp | CATTCTCATGGTGTGCTAGCTTGCCTGTCAGGACTCTaGGGTGAGCTGGGACAGTCTCAGGTGGTCGGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: HSHGVLACLSGL*GELGQSQVVGP Trigger: GGGCCCGACCACCTGAGACTGTCCCAGCTCACCCAAGAGTCCTGACAGGCAAGCTAGCACACCATGAGAATG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097432.10 |
||
| CDS-3UTR TCA 90 bp | AACCCAATCGTTCTCAGCACTGTGAGAAACCCAGAAGCAGAGCCTGGCCCGCACAGGCCAGCAGATGCCTaGGTTCCTCTTCAGTGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: NPIVLSTVRNPEAEPGPHRPADA*VPLQWR Trigger: CCTCCACTGAAGAGGAACTCAGGCATCTGCTGGCCT...GTGCGGGCCAGGCTCTGCTTCTGGGTTTCTCACAGTGCTGAGAACGATTGGGTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097432.10 |
||
| CDS-3UTR GCA 90 bp | CTTGCCTGTCAGGACTCTTGGGTGAGCTGGGACAGTCTCAGGTGGTCGGGCCCTTCCACGGGCACTACATaGAGTTTAATCATGCTGCCG | + |
|
Preference number: 4 (lower is better) Translates to: LACQDSWVSWDSLRWSGPSTGTT*SLIMLP Trigger: CGGCAGCATGATTAAACTGCATGTAGTGCCCGTGGA...AGGGCCCGACCACCTGAGACTGTCCCAGCTCACCCAAGAGTCCTGACAGGCAAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097432.10 |
||
| CDS-3UTR TCA 90 bp | CTTGCCTGTCAGGACTCTTGGGTGAGCTGGGACAGTCTCAGGTGGTCGGGCCCTCACACTGCACAGTCATaGTCTTCTATGTCAACTGTG | + |
|
Preference number: 4 (lower is better) Translates to: LACQDSWVSWDSLRWSGPHTAQS*SSMSTV Trigger: CACAGTTGACATAGAAGATCATGACTGTGCAGTGTG...AGGGCCCGACCACCTGAGACTGTCCCAGCTCACCCAAGAGTCCTGACAGGCAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097432.10 |
||
| CDS-3UTR CCA 90 bp | CTCTGGCCACAGCAGCTCTGCTCCCTACCCCAAGGCCCAGCACAAGGAGTTTCTCGTTTCTCTGTACTTTaGGGCAGTCCTTGTGAAGCT | + |
|
Preference number: 4 (lower is better) Translates to: LWPQQLCSLPQGPAQGVSRFSVL*GSPCEA Trigger: AGCTTCACAAGGACTGCCCCAAAGTACAGAGAAACG...AGAAACTCCTTGTGCTGGGCCTTGGGGTAGGGAGCAGAGCTGCTGTGGCCAGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097432.10 |
||
| CDS-3UTR TCA 90 bp | CATGTTCACCTCGATGACAAACACCTGGGCAGCAGAGGTCAAGGAGAAAAGATGTTGCCCTCCAGTCGCTaGGACTCGTGTCGTACTCCA | + |
|
Preference number: 4 (lower is better) Translates to: HVHLDDKHLGSRGQGEKMLPSSR*DSCRTP Trigger: TGGAGTACGACACGAGTCTCAGCGACTGGAGGGCAA...CATCTTTTCTCCTTGACCTCTGCTGCCCAGGTGTTTGTCATCGAGGTGAACATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097432.10 |
||
| CDS-3UTR TCA 90 bp | CTCTGGCCACAGCAGCTCTGCTCCCTACCCCAAGGCCCAGCACAAGGAGTTTCTTTTCTTACTGCTCTGTaGAGTTCTTTTCTTGCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: LWPQQLCSLPQGPAQGVSFLTAL*SSFLAC Trigger: GCAGGCAAGAAAAGAACTTCACAGAGCAGTAAGAAA...AGAAACTCCTTGTGCTGGGCCTTGGGGTAGGGAGCAGAGCTGCTGTGGCCAGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000097432.10 |
||
| CDS-3UTR GCA 90 bp | CATGTTCACCTCGATGACAAACACCTGGGCAGCAGAGGTCAAGGAGAAAAGATGCTCCATAGGGCACCTTaGCCTCCAGTCGCTGAGACT | + |
|
Preference number: 4 (lower is better) Translates to: HVHLDDKHLGSRGQGEKMLHRAP*PPVAET Trigger: AGTCTCAGCGACTGGAGGGCAAGGTGCCCTATGGAG...CATCTTTTCTCCTTGACCTCTGCTGCCCAGGTGTTTGTCATCGAGGTGAACATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097432.10 |
||
| CDS-3UTR TCA 90 bp | CATGTTCACCTCGATGACAAACACCTGGGCAGCAGAGGTCAAGGAGAAAAGATGTCATCAAGCTCTGTCTaGGGCAGAGAGGCCAGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: HVHLDDKHLGSRGQGEKMSSSSV*GREASR Trigger: TCTGCTGGCCTCTCTGCCTCAGACAGAGCTTGATGA...CATCTTTTCTCCTTGACCTCTGCTGCCCAGGTGTTTGTCATCGAGGTGAACATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097432.10 |
||
| CDS-3UTR GCA 90 bp | AACCCAATCGTTCTCAGCACTGTGAGAAACCCAGAAGCAGAGCCTGGCCCGCACGTGAAGTTCTTTTCTTaGCTGCCAAACAATCCCACG | + |
|
Preference number: 4 (lower is better) Translates to: NPIVLSTVRNPEAEPGPHVKFFS*LPNNPT Trigger: CGTGGGATTGTTTGGCAGGCAAGAAAAGAACTTCAC...GTGCGGGCCAGGCTCTGCTTCTGGGTTTCTCACAGTGCTGAGAACGATTGGGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097432.10 |
||
| CDS-3UTR CCA 90 bp | ATTACTAAAACTCAACAACGATCATCAGCACACGTTCCCACCCTCCCTCTAAGGGGCTCCGCAGTACCTTaGCTGCTGCCGCCAACAGTT | + |
|
Preference number: 4 (lower is better) Translates to: ITKTQQRSSAHVPTLPLRGSAVP*LLPPTV Trigger: AACTGTTGGCGGCAGCAGCCAAGGTACTGCGGAGCC...CCTTAGAGGGAGGGTGGGAACGTGTGCTGATGATCGTTGTTGAGTTTTAGTAAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097432.10 |
||
| CDS-3UTR TCA 90 bp | GAGAGAGGCAGAAAGAGTGATGCAAGAAAGAACCATTGTGCTAAGAGCACCACGGTATTCAGCCAAACGTaGCCCATGGTGAGGGACACT | + |
|
Preference number: 4 (lower is better) Translates to: ERGRKSDARKNHCAKSTTVFSQT*PMVRDT Trigger: AGTGTCCCTCACCATGGGTCACGTTTGGCTGAATAC...CGTGGTGCTCTTAGCACAATGGTTCTTTCTTGCATCACTCTTTCTGCCTCTCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097432.10 |
||
| CDS-3UTR GCA 90 bp | CATGTTCACCTCGATGACAAACACCTGGGCAGCAGAGGTCAAGGAGAAAAGATGCAGTACCTTGGCTGCTaGCGCCAACAGTTTTCTTAC | + |
|
Preference number: 4 (lower is better) Translates to: HVHLDDKHLGSRGQGEKMQYLGC*RQQFSY Trigger: GTAAGAAAACTGTTGGCGGCAGCAGCCAAGGTACTG...CATCTTTTCTCCTTGACCTCTGCTGCCCAGGTGTTTGTCATCGAGGTGAACATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097432.10 |
||
| CDS-3UTR CCA 90 bp | ATTACTAAAACTCAACAACGATCATCAGCACACGTTCCCACCCTCCCTCTAAGGTGTGCAGCCAGGCTCTaGCTGCTTTCACTAAGAGCC | + |
|
Preference number: 4 (lower is better) Translates to: ITKTQQRSSAHVPTLPLRCAARL*LLSLRA Trigger: GGCTCTTAGTGAAAGCAGCCAGAGCCTGGCTGCACA...CCTTAGAGGGAGGGTGGGAACGTGTGCTGATGATCGTTGTTGAGTTTTAGTAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097432.10 |
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| CDS-3UTR GCA 90 bp | TTTGTTCAGGATGATTCCGCCAGTGTTGGATTTGTTCCATCTTGCTCTATTATCGTCCGACACTGGGGATaGAGCACGTACACTCCGTCC | + |
|
Preference number: 4 (lower is better) Translates to: FVQDDSASVGFVPSCSIIVRHWG*STYTPS Trigger: GGACGGAGTGTACGTGCTGCATCCCCAGTGTCGGAC...GATAATAGAGCAAGATGGAACAAATCCAACACTGGCGGAATCATCCTGAACAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097432.10 |
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| CDS-3UTR CCA 90 bp | AACCCAATCGTTCTCAGCACTGTGAGAAACCCAGAAGCAGAGCCTGGCCCGCACAACTGTAGAGTACGTTaGTACAAAAACGCATCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: NPIVLSTVRNPEAEPGPHNCRVR*YKNASF Trigger: AAAGGATGCGTTTTTGTACCAACGTACTCTACAGTT...GTGCGGGCCAGGCTCTGCTTCTGGGTTTCTCACAGTGCTGAGAACGATTGGGTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000097432.10 |
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| CDS-3UTR GCA 90 bp | TCTTTAAGGCGCTGCTGTTTTGCAGTTATCTTGTGCTCATTGGTTTCAATGATGAGCCTCTGCAGGAGTTaGAAGCCACCGCCTGCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: SLRRCCFAVILCSLVSMMSLCRS*KPPPAS Trigger: TGAAGCAGGCGGTGGCTTGCAACTCCTGCAGAGGCT...CATCATTGAAACCAATGAGCACAAGATAACTGCAAAACAGCAGCGCCTTAAAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097432.10 |
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| CDS-3UTR CCA 90 bp | TCTTTAAGGCGCTGCTGTTTTGCAGTTATCTTGTGCTCATTGGTTTCAATGATGAGGGTTCTGGCAGCGTaGGAAGCCTCCATAATGTGG | + |
|
Preference number: 4 (lower is better) Translates to: SLRRCCFAVILCSLVSMMRVLAA*EASIMW Trigger: CCACATTATGGAGGCTTCCCACGCTGCCAGAACCCT...CATCATTGAAACCAATGAGCACAAGATAACTGCAAAACAGCAGCGCCTTAAAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097432.10 |
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| CDS-3UTR TCA 90 bp | TTTGTTCAGGATGATTCCGCCAGTGTTGGATTTGTTCCATCTTGCTCTATTATCCTCGGGTCACAGGCTTaGGCAATTATCCTGTACTGG | + |
|
Preference number: 4 (lower is better) Translates to: FVQDDSASVGFVPSCSIILGSQA*AIILYW Trigger: CCAGTACAGGATAATTGCTCAAGCCTGTGACCCGAG...GATAATAGAGCAAGATGGAACAAATCCAACACTGGCGGAATCATCCTGAACAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097432.10 |
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| CDS-3UTR TCA 90 bp | CATGTTCACCTCGATGACAAACACCTGGGCAGCAGAGGTCAAGGAGAAAAGATGAAATGTTCAAGTGGTTaGCGTCCACAGGAATTAGAT | + |
|
Preference number: 4 (lower is better) Translates to: HVHLDDKHLGSRGQGEKMKCSSG*RPQELD Trigger: ATCTAATTCCTGTGGACGTCAACCACTTGAACATTT...CATCTTTTCTCCTTGACCTCTGCTGCCCAGGTGTTTGTCATCGAGGTGAACATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097432.10 |
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| CDS-3UTR GCA 90 bp | CCCTGTAAAAGTGTCAACTGTGCACCTGGCATATTGACATTAAAAGCTGGCAGTCAGGAGCAGCCACACTaGACAGTCATGATCTTCTAT | + |
|
Preference number: 4 (lower is better) Translates to: PCKSVNCAPGILTLKAGSQEQPH*TVMIFY Trigger: ATAGAAGATCATGACTGTGCAGTGTGGCTGCTCCTG...ACTGCCAGCTTTTAATGTCAATATGCCAGGTGCACAGTTGACACTTTTACAGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097432.10 |
||
| CDS-3UTR GCA 90 bp | CATGTTCACCTCGATGACAAACACCTGGGCAGCAGAGGTCAAGGAGAAAAGATGTTCGTTGCTTCTGAATaGAATCGACTTTCTCTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: HVHLDDKHLGSRGQGEKMFVASE*NRLSLH Trigger: ATGGAGAGAAAGTCGATTGCATTCAGAAGCAACGAA...CATCTTTTCTCCTTGACCTCTGCTGCCCAGGTGTTTGTCATCGAGGTGAACATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097432.10 |
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| CDS-3UTR GCA 90 bp | GAGAGAGGCAGAAAGAGTGATGCAAGAAAGAACCATTGTGCTAAGAGCACCACGGAATTAGATCCCCAATaGCTAAATCTGCTGACTCCA | + |
|
Preference number: 4 (lower is better) Translates to: ERGRKSDARKNHCAKSTTELDPQ*LNLLTP Trigger: TGGAGTCAGCAGATTTAGGCATTGGGGATCTAATTC...CGTGGTGCTCTTAGCACAATGGTTCTTTCTTGCATCACTCTTTCTGCCTCTCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097432.10 |
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| CDS-3UTR TCA 90 bp | TTTGTTCAGGATGATTCCGCCAGTGTTGGATTTGTTCCATCTTGCTCTATTATCCATTTCCACTGTGGCTaGGGGAACCTTTCCAAAGCT | + |
|
Preference number: 4 (lower is better) Translates to: FVQDDSASVGFVPSCSIIHFHCG*GNLSKA Trigger: AGCTTTGGAAAGGTTCCCTCAGCCACAGTGGAAATG...GATAATAGAGCAAGATGGAACAAATCCAACACTGGCGGAATCATCCTGAACAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097432.10 |
||
| CDS-3UTR TCA 90 bp | TTTGTTCAGGATGATTCCGCCAGTGTTGGATTTGTTCCATCTTGCTCTATTATCTGGACTATAGCAGGGTaGAGATGCTCGTTCAAAGCC | + |
|
Preference number: 4 (lower is better) Translates to: FVQDDSASVGFVPSCSIIWTIAG*RCSFKA Trigger: GGCTTTGAACGAGCATCTTCACCCTGCTATAGTCCA...GATAATAGAGCAAGATGGAACAAATCCAACACTGGCGGAATCATCCTGAACAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097432.10 |
||
| CDS-3UTR TCA 90 bp | ATTACTAAAACTCAACAACGATCATCAGCACACGTTCCCACCCTCCCTCTAAGGGAAGTTCGTTGCTTCTaGATGCAATCGACTTTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: ITKTQQRSSAHVPTLPLREVRCF*MQSTFS Trigger: AGAGAAAGTCGATTGCATTCAGAAGCAACGAACTTC...CCTTAGAGGGAGGGTGGGAACGTGTGCTGATGATCGTTGTTGAGTTTTAGTAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097432.10 |
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| CDS-3UTR GCA 90 bp | ATTACTAAAACTCAACAACGATCATCAGCACACGTTCCCACCCTCCCTCTAAGGACTTTCTTTGCTTCGTaGCAAACCAATAAGGGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: ITKTQQRSSAHVPTLPLRTFFAS*QTNKGP Trigger: AGGACCCTTATTGGTTTGGCACGAAGCAAAGAAAGT...CCTTAGAGGGAGGGTGGGAACGTGTGCTGATGATCGTTGTTGAGTTTTAGTAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097432.10 |
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| 3UTR CAA 72 bp | GTGTTGGATTTGTTCCATCTTGCTCTATTATCCACCTaGGTGTACGTTATCATCTACGCCTCACCAAGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: VLDLFHLALLST*VYVIIYASPSL Trigger: AAGGCTTGGTGAGGCGTAGATGATAACGTACACCAAGGTGGATAATAGAGCAAGATGGAACAAATCCAACAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097432.10 |
||
| CDS-3UTR TCA 90 bp | TTTGTTCAGGATGATTCCGCCAGTGTTGGATTTGTTCCATCTTGCTCTATTATCCTATGTCAACTGTGCTaGAAGAGTCAGCAAATGGGC | + |
|
Preference number: 4 (lower is better) Translates to: FVQDDSASVGFVPSCSIILCQLC*KSQQMG Trigger: GCCCATTTGCTGACTCTTTCAGCACAGTTGACATAG...GATAATAGAGCAAGATGGAACAAATCCAACACTGGCGGAATCATCCTGAACAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097432.10 |
||
| CDS-3UTR GCA 90 bp | TTTGTTCAGGATGATTCCGCCAGTGTTGGATTTGTTCCATCTTGCTCTATTATCCTTTCCAAAGCTTTCTaGGTAAGGCAGTCCGTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: FVQDDSASVGFVPSCSIILSKAF*VRQSVS Trigger: GGAAACGGACTGCCTTACGCAGAAAGCTTTGGAAAG...GATAATAGAGCAAGATGGAACAAATCCAACACTGGCGGAATCATCCTGAACAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097432.10 |
||
| CDS-3UTR CCA 90 bp | CATGTTCACCTCGATGACAAACACCTGGGCAGCAGAGGTCAAGGAGAAAAGATGCCGAATGCTTTACTATaGCTTCTAAACAGAACATTT | + |
|
Preference number: 4 (lower is better) Translates to: HVHLDDKHLGSRGQGEKMPNALL*LLNRTF Trigger: AAATGTTCTGTTTAGAAGCCATAGTAAAGCATTCGG...CATCTTTTCTCCTTGACCTCTGCTGCCCAGGTGTTTGTCATCGAGGTGAACATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097432.10 |
||
| CDS-3UTR CCA 90 bp | TCTTTAAGGCGCTGCTGTTTTGCAGTTATCTTGTGCTCATTGGTTTCAATGATGGAAGCCTCCATAATGTaGCTGGACTTCAAGGCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: SLRRCCFAVILCSLVSMMEASIM*LDFKAS Trigger: AGAAGCCTTGAAGTCCAGCCACATTATGGAGGCTTC...CATCATTGAAACCAATGAGCACAAGATAACTGCAAAACAGCAGCGCCTTAAAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097432.10 |
||
| 3UTR CAA 72 bp | GCAGTTATCTTGTGCTCATTGGTTTCAATGATGTCTTaGTTCAGGATGATTCCGCCAGTGTTGGATTTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: AVILCSLVSMMS*FRMIPPVLDLF Trigger: GAACAAATCCAACACTGGCGGAATCATCCTGAACAAAGACATCATTGAAACCAATGAGCACAAGATAACTGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097432.10 |
||
| CDS-3UTR TCA 90 bp | TCTTTAAGGCGCTGCTGTTTTGCAGTTATCTTGTGCTCATTGGTTTCAATGATGTTCTTTGACTTCCAGTaGGGGAAAGAGAAGATATCG | + |
|
Preference number: 4 (lower is better) Translates to: SLRRCCFAVILCSLVSMMFFDFQ*GKEKIS Trigger: CGATATCTTCTCTTTCCCTCACTGGAAGTCAAAGAA...CATCATTGAAACCAATGAGCACAAGATAACTGCAAAACAGCAGCGCCTTAAAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097432.10 |
||
| CDS-3UTR GCA 90 bp | CCCTGTAAAAGTGTCAACTGTGCACCTGGCATATTGACATTAAAAGCTGGCAGTCAACAGTTTTCTTACTaGTCTGTGAAGTTCTTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: PCKSVNCAPGILTLKAGSQQFSY*SVKFFS Trigger: AGAAAAGAACTTCACAGAGCAGTAAGAAAACTGTTG...ACTGCCAGCTTTTAATGTCAATATGCCAGGTGCACAGTTGACACTTTTACAGGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000097432.10 |
||
| CDS CCA 90 bp | TCACCCACAGTTTCTCGGTCCAGGTTAGCCAGGGTTCTGGCAGCGTaGGAAGCCTCCATAATGTGGCTGGACTTCAAGGCTTCTGCCATG | + |
|
Preference number: 5 (lower is better) Translates to: SPTVSRSRLARVLAA*EASIMWLDFKASAM Trigger: CATGGCAGAAGCCTTGAAGTCCAGCCACATTATGGAGGCTTCCCACGCTGCCAGAACCCTGGCTAACCTGGACCGAGAAACTGTGGGTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024570.6 ENSMUST00000097432.10 |
||
| CDS CCA 90 bp | GTGTACCTGTCTTCATCCACCACAGCACTTTCAGTCAGAGCCCGCTaGCTGTCGTGCTGCCGCCAGGTTTTAAATGCTGCTCCCATTAGG | + |
|
Preference number: 5 (lower is better) Translates to: VYLSSSTTALSVRAR*LSCCRQVLNAAPIR Trigger: CCTAATGGGAGCAGCATTTAAAACCTGGCGGCAGCACGACAGCCAGCGGGCTCTGACTGAAAGTGCTGTGGTGGATGAAGACAGGTACAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024570.6 ENSMUST00000097432.10 |
||
| CDS TCA 90 bp | GGAGCAGCCACACTGCACAGTCATGATCTTCTATGTCAACTGTGCTaGAAGAGTCAGCAAATGGGCTCCGCAGTACCTTGGCTGCTGCCG | + |
|
Preference number: 5 (lower is better) Translates to: GAATLHSHDLLCQLC*KSQQMGSAVPWLLP Trigger: CGGCAGCAGCCAAGGTACTGCGGAGCCCATTTGCTGACTCTTTCAGCACAGTTGACATAGAAGATCATGACTGTGCAGTGTGGCTGCTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097432.10 |
||
| CDS-3UTR CAA 90 bp | CTTGCCTGTCAGGACTCTTGGGTGAGCTGGGACAGTCTCAGGTGGTCGGGCCCTGCCGATAAATGTCGGTaGTGTTTCTACAAAGTTCAG | + |
|
Preference number: 5 (lower is better) Translates to: LACQDSWVSWDSLRWSGPADKCR*CFYKVQ Trigger: CTGAACTTTGTAGAAACACAACCGACATTTATCGGC...AGGGCCCGACCACCTGAGACTGTCCCAGCTCACCCAAGAGTCCTGACAGGCAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097432.10 |
||
| CDS TCA 90 bp | TCGTCCTCCCGGCTCTTCCTCAGGAGCAGCCACACTGCACAGTCATaGTCTTCTATGTCAACTGTGCTGAAAGAGTCAGCAAATGGGCTC | + |
|
Preference number: 5 (lower is better) Translates to: SSSRLFLRSSHTAQS*SSMSTVLKESANGL Trigger: GAGCCCATTTGCTGACTCTTTCAGCACAGTTGACATAGAAGATCATGACTGTGCAGTGTGGCTGCTCCTGAGGAAGAGCCGGGAGGACGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097432.10 |
||
| CDS TCA 90 bp | TCGTCCTCCCGGCTCTTCCTCAGGAGCAGCCACACTGCACAGTCATaGTCTTCTATGTCAACTGTGCTGAAAGAGTCACGGTTGTCTAAC | + |
|
Preference number: 5 (lower is better) Translates to: SSSRLFLRSSHTAQS*SSMSTVLKESRLSN Trigger: GTTAGACAACCGTGACTCTTTCAGCACAGTTGACATAGAAGATCATGACTGTGCAGTGTGGCTGCTCCTGAGGAAGAGCCGGGAGGACGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024570.6 |
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| CDS TCA 90 bp | AGAGCCAAGGATGTAAAGTACTGGAGACACTCATCAAGCTCTGTCTaGGGCAGAGAGGCCAGCAGATGCCTGAGTTCCTCTTCAGTGGAG | + |
|
Preference number: 5 (lower is better) Translates to: RAKDVKYWRHSSSSV*GREASRCLSSSSVE Trigger: CTCCACTGAAGAGGAACTCAGGCATCTGCTGGCCTCTCTGCCTCAGACAGAGCTTGATGAGTGTCTCCAGTACTTTACATCCTTGGCTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024570.6 ENSMUST00000097432.10 |
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| CDS GCA 90 bp | TGGGCTCCGCAGTACCTTGGCTGCTGCCGCCAACAGTTTTCTTACTaGTCTGTGAAGTTCTTTTCTTGCCTGCCAAACAATCCCACGGTT | + |
|
Preference number: 5 (lower is better) Translates to: WAPQYLGCCRQQFSY*SVKFFSCLPNNPTV Trigger: AACCGTGGGATTGTTTGGCAGGCAAGAAAAGAACTTCACAGAGCAGTAAGAAAACTGTTGGCGGCAGCAGCCAAGGTACTGCGGAGCCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097432.10 |
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| CDS CCA 90 bp | TTTCCTCCAAAACACCACAGTCCTCCCTTCTGTGCAGCCAGGCTCTaGCTGCTTTCACTAAGAGCCAAGGATGTAAAGTACTGGAGACAC | + |
|
Preference number: 5 (lower is better) Translates to: FPPKHHSPPFCAARL*LLSLRAKDVKYWRH Trigger: GTGTCTCCAGTACTTTACATCCTTGGCTCTTAGTGAAAGCAGCCAGAGCCTGGCTGCACAGAAGGGAGGACTGTGGTGTTTTGGAGGAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024570.6 ENSMUST00000097432.10 |
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| CDS-3UTR CAA 90 bp | AACCCAATCGTTCTCAGCACTGTGAGAAACCCAGAAGCAGAGCCTGGCCCGCACCAAATGTTCAAGTGGTaGACGTCCACAGGAATTAGA | + |
|
Preference number: 5 (lower is better) Translates to: NPIVLSTVRNPEAEPGPHQMFKW*TSTGIR Trigger: TCTAATTCCTGTGGACGTCAACCACTTGAACATTTG...GTGCGGGCCAGGCTCTGCTTCTGGGTTTCTCACAGTGCTGAGAACGATTGGGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097432.10 |
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| CDS TCA 90 bp | GCTTCTGCCATGAGAGATACCCATCCTGAGTGGACTATAGCAGGGTaGAGATGCTCGTTCAAAGCCATGTTTCCGATGATCCTCATGACG | + |
|
Preference number: 5 (lower is better) Translates to: ASAMRDTHPEWTIAG*RCSFKAMFPMILMT Trigger: CGTCATGAGGATCATCGGAAACATGGCTTTGAACGAGCATCTTCACCCTGCTATAGTCCACTCAGGATGGGTATCTCTCATGGCAGAAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024570.6 ENSMUST00000097432.10 |
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| CDS TCA 90 bp | CGCAGTACCTTGGCTGCTGCCGCCAACAGTTTTCTTACTGCTCTGTaGAGTTCTTTTCTTGCCTGCCAAACAATCCCACGGTTGTCTAAC | + |
|
Preference number: 5 (lower is better) Translates to: RSTLAAAANSFLTAL*SSFLACQTIPRLSN Trigger: GTTAGACAACCGTGGGATTGTTTGGCAGGCAAGAAAAGAACTTCACAGAGCAGTAAGAAAACTGTTGGCGGCAGCAGCCAAGGTACTGCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097432.10 |
||
| CDS GCA 90 bp | TGTGCTGAAAGAGTCAGCAAATGGGCTCCGCAGTACCTTGGCTGCTaGCGCCAACAGTTTTCTTACTGCTCTGTGAAGTTCTTTTCTTGC | + |
|
Preference number: 5 (lower is better) Translates to: CAERVSKWAPQYLGC*RQQFSYCSVKFFSC Trigger: GCAAGAAAAGAACTTCACAGAGCAGTAAGAAAACTGTTGGCGGCAGCAGCCAAGGTACTGCGGAGCCCATTTGCTGACTCTTTCAGCACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097432.10 |
||
| CDS-3UTR CAA 90 bp | GAGAGAGGCAGAAAGAGTGATGCAAGAAAGAACCATTGTGCTAAGAGCACCACGCCTCGGGTCACAGGCTaGAGCAATTATCCTGTACTG | + |
|
Preference number: 5 (lower is better) Translates to: ERGRKSDARKNHCAKSTTPRVTG*SNYPVL Trigger: CAGTACAGGATAATTGCTCAAGCCTGTGACCCGAGG...CGTGGTGCTCTTAGCACAATGGTTCTTTCTTGCATCACTCTTTCTGCCTCTCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097432.10 |
||
| CDS-3UTR CAA 90 bp | ATTACTAAAACTCAACAACGATCATCAGCACACGTTCCCACCCTCCCTCTAAGGCCAGCAGCCCTGAGCTaGCTGAGAAGTTCGTTGCTT | + |
|
Preference number: 5 (lower is better) Translates to: ITKTQQRSSAHVPTLPLRPAALS*LRSSLL Trigger: AAGCAACGAACTTCTCAGCAAGCTCAGGGCTGCTGG...CCTTAGAGGGAGGGTGGGAACGTGTGCTGATGATCGTTGTTGAGTTTTAGTAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097432.10 |
||
| CDS TCA 90 bp | GGAGCAGCCACACTGCACAGTCATGATCTTCTATGTCAACTGTGCTaGAAGAGTCACGGTTGTCTAACCTGTCTACAGGAGCTTTGTGCA | + |
|
Preference number: 5 (lower is better) Translates to: GAATLHSHDLLCQLC*KSHGCLTCLQELCA Trigger: TGCACAAAGCTCCTGTAGACAGGTTAGACAACCGTGACTCTTTCAGCACAGTTGACATAGAAGATCATGACTGTGCAGTGTGGCTGCTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024570.6 |
||
| CDS GCA 90 bp | CCACCGCCTGCTTCAATGTGGTCACAGTGTGAGGGTATCTCCGAATaGTTTACTATGGCTTCTAAACAGAACATTTCCACTGTGGCTGAG | + |
|
Preference number: 5 (lower is better) Translates to: PPPASMWSQCEGISE*FTMASKQNISTVAE Trigger: CTCAGCCACAGTGGAAATGTTCTGTTTAGAAGCCATAGTAAAGCATTCGGAGATACCCTCACACTGTGACCACATTGAAGCAGGCGGTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024570.6 ENSMUST00000097432.10 |
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| CDS GCA 90 bp | AACTGTGCTGAAAGAGTCAGCAAATGGGCTCCGCAGTACCTTGGCTaGTGCCGCCAACAGTTTTCTTACTGCTCTGTGAAGTTCTTTTCT | + |
|
Preference number: 5 (lower is better) Translates to: NCAERVSKWAPQYLG*CRQQFSYCSVKFFS Trigger: AGAAAAGAACTTCACAGAGCAGTAAGAAAACTGTTGGCGGCAGCAGCCAAGGTACTGCGGAGCCCATTTGCTGACTCTTTCAGCACAGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097432.10 |
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| CDS CCA 90 bp | ACAGTCATGATCTTCTATGTCAACTGTGCTGAAAGAGTCAGCAAATaGGCTCCGCAGTACCTTGGCTGCTGCCGCCAACAGTTTTCTTAC | + |
|
Preference number: 5 (lower is better) Translates to: TVMIFYVNCAERVSK*APQYLGCCRQQFSY Trigger: GTAAGAAAACTGTTGGCGGCAGCAGCCAAGGTACTGCGGAGCCCATTTGCTGACTCTTTCAGCACAGTTGACATAGAAGATCATGACTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097432.10 |
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| CDS-3UTR CAA 90 bp | CATGTTCACCTCGATGACAAACACCTGGGCAGCAGAGGTCAAGGAGAAAAGATGTTGCTGAGAAGTTCGTaGCTTCTGAATGCAATCGAC | + |
|
Preference number: 5 (lower is better) Translates to: HVHLDDKHLGSRGQGEKMLLRSS*LLNAID Trigger: GTCGATTGCATTCAGAAGCAACGAACTTCTCAGCAA...CATCTTTTCTCCTTGACCTCTGCTGCCCAGGTGTTTGTCATCGAGGTGAACATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097432.10 |
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| CDS-3UTR CAA 90 bp | ATTACTAAAACTCAACAACGATCATCAGCACACGTTCCCACCCTCCCTCTAAGGGTGAGATCCAAATCATaGGCCTATCCCCAACACCAG | + |
|
Preference number: 5 (lower is better) Translates to: ITKTQQRSSAHVPTLPLRVRSKS*AYPQHQ Trigger: CTGGTGTTGGGGATAGGCCAATGATTTGGATCTCAC...CCTTAGAGGGAGGGTGGGAACGTGTGCTGATGATCGTTGTTGAGTTTTAGTAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097432.10 |
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| CDS CCA 90 bp | TCTCCGAATGCTTTACTATGGCTTCTAAACAGAACATTTCCACTGTaGCTGAGGGAACCTTTCCAAAGCTTTCTGCGTAAGGCAGTCCGT | + |
|
Preference number: 5 (lower is better) Translates to: SPNALLWLLNRTFPL*LREPFQSFLRKAVR Trigger: ACGGACTGCCTTACGCAGAAAGCTTTGGAAAGGTTCCCTCAGCCACAGTGGAAATGTTCTGTTTAGAAGCCATAGTAAAGCATTCGGAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024570.6 ENSMUST00000097432.10 |
||
| CDS-3UTR CAA 90 bp | ATTACTAAAACTCAACAACGATCATCAGCACACGTTCCCACCCTCCCTCTAAGGAGTGCAGGAGAGTCTTaGCTGAGTTCTTTGACTTCC | + |
|
Preference number: 5 (lower is better) Translates to: ITKTQQRSSAHVPTLPLRSAGES*LSSLTS Trigger: GGAAGTCAAAGAACTCAGCAAAGACTCTCCTGCACT...CCTTAGAGGGAGGGTGGGAACGTGTGCTGATGATCGTTGTTGAGTTTTAGTAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097432.10 |
||
| CDS CCA 90 bp | CTTCAATGTGGTCACAGTGTGAGGGTATCTCCGAATGCTTTACTATaGCTTCTAAACAGAACATTTCCACTGTGGCTGAGGGAACCTTTC | + |
|
Preference number: 5 (lower is better) Translates to: LQCGHSVRVSPNALL*LLNRTFPLWLREPF Trigger: GAAAGGTTCCCTCAGCCACAGTGGAAATGTTCTGTTTAGAAGCCATAGTAAAGCATTCGGAGATACCCTCACACTGTGACCACATTGAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024570.6 ENSMUST00000097432.10 |
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| CDS CCA 90 bp | ATGCTGCCGATAAATGTCGGTTGTGTTTCTACAAAGTTCAGCACCTaGAAGTTTTTGTCTTTCGCGAACTCCAGAAAGTCGTCCTGTAGC | + |
|
Preference number: 5 (lower is better) Translates to: MLPINVGCVSTKFST*KFLSFANSRKSSCS Trigger: GCTACAGGACGACTTTCTGGAGTTCGCGAAAGACAAAAACTTCCAGGTGCTGAACTTTGTAGAAACACAACCGACATTTATCGGCAGCAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000024570.6 ENSMUST00000097432.10 |
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| CDS-3UTR CAA 90 bp | CCCTGTAAAAGTGTCAACTGTGCACCTGGCATATTGACATTAAAAGCTGGCAGTAGCACCTGGAAGTTTTaGTCTTTCGCGAACTCCAGA | + |
|
Preference number: 5 (lower is better) Translates to: PCKSVNCAPGILTLKAGSSTWKF*SFANSR Trigger: TCTGGAGTTCGCGAAAGACAAAAACTTCCAGGTGCT...ACTGCCAGCTTTTAATGTCAATATGCCAGGTGCACAGTTGACACTTTTACAGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000097432.10 |
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| CDS TCA 90 bp | ACAAAAACGCATCCTTTGTCTTCGGCTTGCAAATGTTCAAGTGGTTaGCGTCCACAGGAATTAGATCCCCAATGCCTAAATCTGCTGACT | + |
|
Preference number: 5 (lower is better) Translates to: TKTHPLSSACKCSSG*RPQELDPQCLNLLT Trigger: AGTCAGCAGATTTAGGCATTGGGGATCTAATTCCTGTGGACGTCAACCACTTGAACATTTGCAAGCCGAAGACAAAGGATGCGTTTTTGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000024570.6 ENSMUST00000097432.10 |
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| CDS GCA 90 bp | ATTAGATCCCCAATGCCTAAATCTGCTGACTCCACGGGCACTACATaGAGTTTAATCATGCTGCCGATAAATGTCGGTTGTGTTTCTACA | + |
|
Preference number: 5 (lower is better) Translates to: IRSPMPKSADSTGTT*SLIMLPINVGCVST Trigger: TGTAGAAACACAACCGACATTTATCGGCAGCATGATTAAACTGCATGTAGTGCCCGTGGAGTCAGCAGATTTAGGCATTGGGGATCTAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024570.6 ENSMUST00000097432.10 |
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| CDS-3UTR CAA 90 bp | CCCTGTAAAAGTGTCAACTGTGCACCTGGCATATTGACATTAAAAGCTGGCAGTTCCTTTGTCTTCGGCTaGCAAATGTTCAAGTGGTTG | + |
|
Preference number: 5 (lower is better) Translates to: PCKSVNCAPGILTLKAGSSFVFG*QMFKWL Trigger: CAACCACTTGAACATTTGCAAGCCGAAGACAAAGGA...ACTGCCAGCTTTTAATGTCAATATGCCAGGTGCACAGTTGACACTTTTACAGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097432.10 |
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| CDS TCA 90 bp | AAATCTTATTATATTTCGGATATTTCTCCAGGGCGTGCGACTTTTTaGTCGGGGAGCAAAGGATCCTATCCTCCTGCAACAGATGACACA | + |
|
Preference number: 5 (lower is better) Translates to: KSYYISDISPGRATF*SGSKGSYPPATDDT Trigger: TGTGTCATCTGTTGCAGGAGGATAGGATCCTTTGCTCCCCGATCAAAAAGTCGCACGCCCTGGAGAAATATCCGAAATATAATAAGATTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000024570.6 ENSMUST00000097432.10 |
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| CDS-3UTR CAA 90 bp | CCCTGTAAAAGTGTCAACTGTGCACCTGGCATATTGACATTAAAAGCTGGCAGTCGAAGATCACTTTCTTaGCTTCGTGCCAAACCAATA | + |
|
Preference number: 5 (lower is better) Translates to: PCKSVNCAPGILTLKAGSRRSLS*LRAKPI Trigger: TATTGGTTTGGCACGAAGCAAAGAAAGTGATCTTCG...ACTGCCAGCTTTTAATGTCAATATGCCAGGTGCACAGTTGACACTTTTACAGGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097432.10 |
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| CDS CCA 90 bp | TCAAGATCTCTGGCTAAAGTTTCGCAGATGAACTGTAGAGTACGTTaGTACAAAAACGCATCCTTTGTCTTCGGCTTGCAAATGTTCAAG | + |
|
Preference number: 5 (lower is better) Translates to: SRSLAKVSQMNCRVR*YKNASFVFGLQMFK Trigger: CTTGAACATTTGCAAGCCGAAGACAAAGGATGCGTTTTTGTACCAACGTACTCTACAGTTCATCTGCGAAACTTTAGCCAGAGATCTTGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000024570.6 ENSMUST00000097432.10 |
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| CDS GCA 72 bp | ACAGCACTTTCAGTCAGAGCCCGCTGGCTGTCGTGCTaGCGCCAGGTTTTAAATGCTGCTCCCATTAGGCCA | + |
|
Preference number: 6 (lower is better) Translates to: TALSVRARWLSC*RQVLNAAPIRP Trigger: TGGCCTAATGGGAGCAGCATTTAAAACCTGGCGGCAGCACGACAGCCAGCGGGCTCTGACTGAAAGTGCTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024570.6 ENSMUST00000097432.10 |
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| CDS GCA 72 bp | ACCACAGCACTTTCAGTCAGAGCCCGCTGGCTGTCGTaGTGCCGCCAGGTTTTAAATGCTGCTCCCATTAGG | + |
|
Preference number: 6 (lower is better) Translates to: TTALSVRARWLS*CRQVLNAAPIR Trigger: CCTAATGGGAGCAGCATTTAAAACCTGGCGGCAGCACGACAGCCAGCGGGCTCTGACTGAAAGTGCTGTGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024570.6 ENSMUST00000097432.10 |
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| CDS CCA 72 bp | GTTTCTCGGTCCAGGTTAGCCAGGGTTCTGGCAGCGTaGGAAGCCTCCATAATGTGGCTGGACTTCAAGGCT | + |
|
Preference number: 6 (lower is better) Translates to: VSRSRLARVLAA*EASIMWLDFKA Trigger: AGCCTTGAAGTCCAGCCACATTATGGAGGCTTCCCACGCTGCCAGAACCCTGGCTAACCTGGACCGAGAAAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024570.6 ENSMUST00000097432.10 |
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| CDS CAA 72 bp | GCAGTCCTTGTGAAGCTGGTAGAGCCTCTGCAGGAGTaGCAAGCCACCGCCTGCTTCAATGTGGTCACAGTG | + |
|
Preference number: 6 (lower is better) Translates to: AVLVKLVEPLQE*QATACFNVVTV Trigger: CACTGTGACCACATTGAAGCAGGCGGTGGCTTGCAACTCCTGCAGAGGCTCTACCAGCTTCACAAGGACTGC 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024570.6 ENSMUST00000097432.10 |
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| CDS CAA 90 bp | GGCCTATCCCCAACACCAGCAGCCCTGAGCTTGCTGAGAAGTTCGTaGCTTCTGAATGCAATCGACTTTCTCTCCATAGGGCACCTTGCC | + |
|
Preference number: 6 (lower is better) Translates to: GLSPTPAALSLLRSS*LLNAIDFLSIGHLA Trigger: GGCAAGGTGCCCTATGGAGAGAAAGTCGATTGCATTCAGAAGCAACGAACTTCTCAGCAAGCTCAGGGCTGCTGGTGTTGGGGATAGGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024570.6 ENSMUST00000097432.10 |
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| CDS GCA 72 bp | TCTGAATGCAATCGACTTTCTCTCCATAGGGCACCTTaGCCTCCAGTCGCTGAGACTCGTGTCGTACTCCAC | + |
|
Preference number: 6 (lower is better) Translates to: SECNRLSLHRAP*PPVAETRVVLH Trigger: GTGGAGTACGACACGAGTCTCAGCGACTGGAGGGCAAGGTGCCCTATGGAGAGAAAGTCGATTGCATTCAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024570.6 ENSMUST00000097432.10 |
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| CDS CAA 72 bp | ATGCGAAGTGAGGGGCAGTCCTTTGCTAGCCATGTCTaGGGCCAGCATGTAGTGTACCTGTCTTCATCCACC | + |
|
Preference number: 6 (lower is better) Translates to: MRSEGQSFASHV*GQHVVYLSSST Trigger: GGTGGATGAAGACAGGTACACTACATGCTGGCCCAAGACATGGCTAGCAAAGGACTGCCCCTCACTTCGCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024570.6 ENSMUST00000097432.10 |
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| CDS CAA 72 bp | GTGCTGAAAGAGTCAGCAAATGGGCTCCGCAGTACCTaGGCTGCTGCCGCCAACAGTTTTCTTACTGCTCTG | + |
|
Preference number: 6 (lower is better) Translates to: VLKESANGLRST*AAAANSFLTAL Trigger: CAGAGCAGTAAGAAAACTGTTGGCGGCAGCAGCCAAGGTACTGCGGAGCCCATTTGCTGACTCTTTCAGCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097432.10 |
||
| CDS TCA 72 bp | CGGCTCTTCCTCAGGAGCAGCCACACTGCACAGTCATaGTCTTCTATGTCAACTGTGCTGAAAGAGTCACGG | + |
|
Preference number: 6 (lower is better) Translates to: RLFLRSSHTAQS*SSMSTVLKESR Trigger: CCGTGACTCTTTCAGCACAGTTGACATAGAAGATCATGACTGTGCAGTGTGGCTGCTCCTGAGGAAGAGCCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024570.6 |
||
| CDS GCA 72 bp | AGAGTCAGCAAATGGGCTCCGCAGTACCTTGGCTGCTaGCGCCAACAGTTTTCTTACTGCTCTGTGAAGTTC | + |
|
Preference number: 6 (lower is better) Translates to: RVSKWAPQYLGC*RQQFSYCSVKF Trigger: GAACTTCACAGAGCAGTAAGAAAACTGTTGGCGGCAGCAGCCAAGGTACTGCGGAGCCCATTTGCTGACTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097432.10 |
||
| CDS GCA 72 bp | GAAAGAGTCAGCAAATGGGCTCCGCAGTACCTTGGCTaGTGCCGCCAACAGTTTTCTTACTGCTCTGTGAAG | + |
|
Preference number: 6 (lower is better) Translates to: ERVSKWAPQYLG*CRQQFSYCSVK Trigger: CTTCACAGAGCAGTAAGAAAACTGTTGGCGGCAGCAGCCAAGGTACTGCGGAGCCCATTTGCTGACTCTTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097432.10 |
||
| CDS CCA 72 bp | ATCTTCTATGTCAACTGTGCTGAAAGAGTCAGCAAATaGGCTCCGCAGTACCTTGGCTGCTGCCGCCAACAG | + |
|
Preference number: 6 (lower is better) Translates to: IFYVNCAERVSK*APQYLGCCRQQ Trigger: CTGTTGGCGGCAGCAGCCAAGGTACTGCGGAGCCCATTTGCTGACTCTTTCAGCACAGTTGACATAGAAGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097432.10 |
||
| CDS CAA 90 bp | TTCTTTGCTTCGTGCCAAACCAATAAGGGTCCTCGGGTCACAGGCTaGAGCAATTATCCTGTACTGGTAGTCATGCCAGTGGTGAGCCTC | + |
|
Preference number: 6 (lower is better) Translates to: FFASCQTNKGPRVTG*SNYPVLVVMPVVSL Trigger: GAGGCTCACCACTGGCATGACTACCAGTACAGGATAATTGCTCAAGCCTGTGACCCGAGGACCCTTATTGGTTTGGCACGAAGCAAAGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024570.6 ENSMUST00000097432.10 |
||
| CDS CAA 90 bp | ACAGATATGATGCGAAGTGAGGGGCAGTCCTTTGCTAGCCATGTCTaGGGCCAGCATGTAGTGTACCTGTCTTCATCCACCACAGCACTT | + |
|
Preference number: 6 (lower is better) Translates to: TDMMRSEGQSFASHV*GQHVVYLSSSTTAL Trigger: AAGTGCTGTGGTGGATGAAGACAGGTACACTACATGCTGGCCCAAGACATGGCTAGCAAAGGACTGCCCCTCACTTCGCATCATATCTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024570.6 ENSMUST00000097432.10 |
||
| CDS TCA 72 bp | CGGCTCTTCCTCAGGAGCAGCCACACTGCACAGTCATaGTCTTCTATGTCAACTGTGCTGAAAGAGTCAGCA | + |
|
Preference number: 6 (lower is better) Translates to: RLFLRSSHTAQS*SSMSTVLKESA Trigger: TGCTGACTCTTTCAGCACAGTTGACATAGAAGATCATGACTGTGCAGTGTGGCTGCTCCTGAGGAAGAGCCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097432.10 |
||
| CDS GCA 72 bp | AGCCCTGAGCTTGCTGAGAAGTTCGTTGCTTCTGAATaGAATCGACTTTCTCTCCATAGGGCACCTTGCCCT | + |
|
Preference number: 6 (lower is better) Translates to: SPELAEKFVASE*NRLSLHRAPCP Trigger: AGGGCAAGGTGCCCTATGGAGAGAAAGTCGATTGCATTCAGAAGCAACGAACTTCTCAGCAAGCTCAGGGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024570.6 ENSMUST00000097432.10 |
||
| CDS CAA 72 bp | TCGTGCCAAACCAATAAGGGTCCTCGGGTCACAGGCTaGAGCAATTATCCTGTACTGGTAGTCATGCCAGTG | + |
|
Preference number: 6 (lower is better) Translates to: SCQTNKGPRVTG*SNYPVLVVMPV Trigger: CACTGGCATGACTACCAGTACAGGATAATTGCTCAAGCCTGTGACCCGAGGACCCTTATTGGTTTGGCACGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024570.6 ENSMUST00000097432.10 |
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| CDS CAA 72 bp | CCAACACCAGCAGCCCTGAGCTTGCTGAGAAGTTCGTaGCTTCTGAATGCAATCGACTTTCTCTCCATAGGG | + |
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Preference number: 6 (lower is better) Translates to: PTPAALSLLRSS*LLNAIDFLSIG Trigger: CCCTATGGAGAGAAAGTCGATTGCATTCAGAAGCAACGAACTTCTCAGCAAGCTCAGGGCTGCTGGTGTTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024570.6 ENSMUST00000097432.10 |
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| CDS CAA 72 bp | ATCATTGGCCTATCCCCAACACCAGCAGCCCTGAGCTaGCTGAGAAGTTCGTTGCTTCTGAATGCAATCGAC | + |
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Preference number: 6 (lower is better) Translates to: IIGLSPTPAALS*LRSSLLLNAID Trigger: GTCGATTGCATTCAGAAGCAACGAACTTCTCAGCAAGCTCAGGGCTGCTGGTGTTGGGGATAGGCCAATGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024570.6 ENSMUST00000097432.10 |
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| CDS CAA 90 bp | GAGATCCAAATCATTGGCCTATCCCCAACACCAGCAGCCCTGAGCTaGCTGAGAAGTTCGTTGCTTCTGAATGCAATCGACTTTCTCTCC | + |
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Preference number: 6 (lower is better) Translates to: EIQIIGLSPTPAALS*LRSSLLLNAIDFLS Trigger: GGAGAGAAAGTCGATTGCATTCAGAAGCAACGAACTTCTCAGCAAGCTCAGGGCTGCTGGTGTTGGGGATAGGCCAATGATTTGGATCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024570.6 ENSMUST00000097432.10 |
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| CDS TCA 72 bp | CAGCATCTTCTTCACAAGAAGACCTCCCATGCTGTGTaGGATCCAAATCATTGGCCTATCCCCAACACCAGC | + |
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Preference number: 6 (lower is better) Translates to: QHLLHKKTSHAV*DPNHWPIPNTS Trigger: GCTGGTGTTGGGGATAGGCCAATGATTTGGATCTCACACAGCATGGGAGGTCTTCTTGTGAAGAAGATGCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024570.6 ENSMUST00000097432.10 |
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| CDS TCA 72 bp | ACACTGCACAGTCATGATCTTCTATGTCAACTGTGCTaGAAGAGTCAGCAAATGGGCTCCGCAGTACCTTGG | + |
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Preference number: 6 (lower is better) Translates to: TLHSHDLLCQLC*KSQQMGSAVPW Trigger: CCAAGGTACTGCGGAGCCCATTTGCTGACTCTTTCAGCACAGTTGACATAGAAGATCATGACTGTGCAGTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097432.10 |
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| CDS TCA 72 bp | ATGAGAGATACCCATCCTGAGTGGACTATAGCAGGGTaGAGATGCTCGTTCAAAGCCATGTTTCCGATGATC | + |
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Preference number: 6 (lower is better) Translates to: MRDTHPEWTIAG*RCSFKAMFPMI Trigger: GATCATCGGAAACATGGCTTTGAACGAGCATCTTCACCCTGCTATAGTCCACTCAGGATGGGTATCTCTCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024570.6 ENSMUST00000097432.10 |
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| CDS GCA 72 bp | CCAATGCCTAAATCTGCTGACTCCACGGGCACTACATaGAGTTTAATCATGCTGCCGATAAATGTCGGTTGT | + |
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Preference number: 6 (lower is better) Translates to: PMPKSADSTGTT*SLIMLPINVGC Trigger: ACAACCGACATTTATCGGCAGCATGATTAAACTGCATGTAGTGCCCGTGGAGTCAGCAGATTTAGGCATTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024570.6 ENSMUST00000097432.10 |
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| CDS TCA 72 bp | ACACTGCACAGTCATGATCTTCTATGTCAACTGTGCTaGAAGAGTCACGGTTGTCTAACCTGTCTACAGGAG | + |
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Preference number: 6 (lower is better) Translates to: TLHSHDLLCQLC*KSHGCLTCLQE Trigger: CTCCTGTAGACAGGTTAGACAACCGTGACTCTTTCAGCACAGTTGACATAGAAGATCATGACTGTGCAGTGT 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024570.6 |
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| CDS CAA 72 bp | GGTTGTGTTTCTACAAAGTTCAGCACCTGGAAGTTTTaGTCTTTCGCGAACTCCAGAAAGTCGTCCTGTAGC | + |
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Preference number: 6 (lower is better) Translates to: GCVSTKFSTWKF*SFANSRKSSCS Trigger: GCTACAGGACGACTTTCTGGAGTTCGCGAAAGACAAAAACTTCCAGGTGCTGAACTTTGTAGAAACACAACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024570.6 ENSMUST00000097432.10 |
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| CDS CAA 72 bp | GCATCCTTTGTCTTCGGCTTGCAAATGTTCAAGTGGTaGACGTCCACAGGAATTAGATCCCCAATGCCTAAA | + |
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Preference number: 6 (lower is better) Translates to: ASFVFGLQMFKW*TSTGIRSPMPK Trigger: TTTAGGCATTGGGGATCTAATTCCTGTGGACGTCAACCACTTGAACATTTGCAAGCCGAAGACAAAGGATGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024570.6 ENSMUST00000097432.10 |
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| CDS CAA 90 bp | CACGGGCACTACATGCAGTTTAATCATGCTGCCGATAAATGTCGGTaGTGTTTCTACAAAGTTCAGCACCTGGAAGTTTTTGTCTTTCGC | + |
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Preference number: 6 (lower is better) Translates to: HGHYMQFNHAADKCR*CFYKVQHLEVFVFR Trigger: GCGAAAGACAAAAACTTCCAGGTGCTGAACTTTGTAGAAACACAACCGACATTTATCGGCAGCATGATTAAACTGCATGTAGTGCCCGTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000024570.6 ENSMUST00000097432.10 |
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| CDS CAA 90 bp | TACAAAAACGCATCCTTTGTCTTCGGCTTGCAAATGTTCAAGTGGTaGACGTCCACAGGAATTAGATCCCCAATGCCTAAATCTGCTGAC | + |
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Preference number: 6 (lower is better) Translates to: YKNASFVFGLQMFKW*TSTGIRSPMPKSAD Trigger: GTCAGCAGATTTAGGCATTGGGGATCTAATTCCTGTGGACGTCAACCACTTGAACATTTGCAAGCCGAAGACAAAGGATGCGTTTTTGTA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000024570.6 ENSMUST00000097432.10 |
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| CDS CAA 90 bp | AACTGTAGAGTACGTTGGTACAAAAACGCATCCTTTGTCTTCGGCTaGCAAATGTTCAAGTGGTTGACGTCCACAGGAATTAGATCCCCA | + |
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Preference number: 6 (lower is better) Translates to: NCRVRWYKNASFVFG*QMFKWLTSTGIRSP Trigger: TGGGGATCTAATTCCTGTGGACGTCAACCACTTGAACATTTGCAAGCCGAAGACAAAGGATGCGTTTTTGTACCAACGTACTCTACAGTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000024570.6 ENSMUST00000097432.10 |
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| CDS TCA 72 bp | CATCCTTTGTCTTCGGCTTGCAAATGTTCAAGTGGTTaGCGTCCACAGGAATTAGATCCCCAATGCCTAAAT | + |
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Preference number: 6 (lower is better) Translates to: HPLSSACKCSSG*RPQELDPQCLN Trigger: ATTTAGGCATTGGGGATCTAATTCCTGTGGACGTCAACCACTTGAACATTTGCAAGCCGAAGACAAAGGATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024570.6 ENSMUST00000097432.10 |
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| CDS CAA 90 bp | ATAAATGTCGGTTGTGTTTCTACAAAGTTCAGCACCTGGAAGTTTTaGTCTTTCGCGAACTCCAGAAAGTCGTCCTGTAGCGTCTTCAGT | + |
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Preference number: 6 (lower is better) Translates to: INVGCVSTKFSTWKF*SFANSRKSSCSVFS Trigger: ACTGAAGACGCTACAGGACGACTTTCTGGAGTTCGCGAAAGACAAAAACTTCCAGGTGCTGAACTTTGTAGAAACACAACCGACATTTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024570.6 ENSMUST00000097432.10 |
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| CDS GCA 72 bp | GCTTCAATGTGGTCACAGTGTGAGGGTATCTCCGAATaGTTTACTATGGCTTCTAAACAGAACATTTCCACT | + |
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Preference number: 6 (lower is better) Translates to: ASMWSQCEGISE*FTMASKQNIST Trigger: AGTGGAAATGTTCTGTTTAGAAGCCATAGTAAAGCATTCGGAGATACCCTCACACTGTGACCACATTGAAGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024570.6 ENSMUST00000097432.10 |
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| CDS CAA 72 bp | TACATGCAGTTTAATCATGCTGCCGATAAATGTCGGTaGTGTTTCTACAAAGTTCAGCACCTGGAAGTTTTT | + |
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Preference number: 6 (lower is better) Translates to: YMQFNHAADKCR*CFYKVQHLEVF Trigger: AAAAACTTCCAGGTGCTGAACTTTGTAGAAACACAACCGACATTTATCGGCAGCATGATTAAACTGCATGTA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024570.6 ENSMUST00000097432.10 |
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