Pregenerated sensors for SEPTIN2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000026276Ensembl transcript IDs: ENSMUST00000027495.15, ENSMUST00000112912.8, ENSMUST00000129211.8, ENSMUST00000131175.9, ENSMUST00000136182.8, ENSMUST00000142401.8, ENSMUST00000149532.8, ENSMUST00000150931.2, ENSMUST00000153826.8, ENSMUST00000157021.2, ENSMUST00000168776.8, ENSMUST00000172165.8, ENSMUST00000179353.8
Found 175 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TTTGTTCAAGAGCACCACCCAATCACAAGCCTGGGGTTGGATCCATaGCAGCCAAGGACTATGATTTCCACTGCTATGACCTTTTGCACC | + |
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Preference number: 1 (lower is better) Translates to: FVQEHHPITSLGLDP*QPRTMISTAMTFCT Trigger: GGTGCAAAAGGTCATAGCAGTGGAAATCATAGTCCTTGGCTGGCATGGATCCAACCCCAGGCTTGTGATTGGGTGGTGCTCTTGAACAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000027495.15 ENSMUST00000168776.8 ENSMUST00000172165.8 ENSMUST00000179353.8 |
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| 3UTR TCA 90 bp | TTACTAGACAGTAGGTGGCAGCAGAGACTAGTTTCTGCTTTTCAATaGAAGGTTACTAACACAGCTAACAGCAGCGGACTTGAGAGAGAG | + |
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Preference number: 1 (lower is better) Translates to: LLDSRWQQRLVSAFQ*KVTNTANSSGLERE Trigger: CTCTCTCTCAAGTCCGCTGCTGTTAGCTGTGTTAGTAACCTTTCATTGAAAAGCAGAAACTAGTCTCTGCTGCCACCTACTGTCTAGTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000157021.2 |
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| 3UTR GCA 90 bp | AAGCCTGGGGTTGGATCCATGCCAGCCAAGGACTATGATTTCCACTaGTATGACCTTTTGCACCTAGTTATAGAAAGTACATTAAAGTGC | + |
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Preference number: 1 (lower is better) Translates to: KPGVGSMPAKDYDFH*YDLLHLVIESTLKC Trigger: GCACTTTAATGTACTTTCTATAACTAGGTGCAAAAGGTCATAGCAGTGGAAATCATAGTCCTTGGCTGGCATGGATCCAACCCCAGGCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000027495.15 ENSMUST00000168776.8 ENSMUST00000172165.8 ENSMUST00000179353.8 |
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| 3UTR GCA 90 bp | CAATGTGACTTCAATTCTAGTAAGCAAATAATTTGCCACCAAGTATaGACAACCACTTCTGTCACAGGTACATCAATGTCCACCACACAG | + |
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Preference number: 1 (lower is better) Translates to: QCDFNSSKQIICHQV*TTTSVTGTSMSTTQ Trigger: CTGTGTGGTGGACATTGATGTACCTGTGACAGAAGTGGTTGTGCATACTTGGTGGCAAATTATTTGCTTACTAGAATTGAAGTCACATTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000027495.15 ENSMUST00000168776.8 ENSMUST00000172165.8 ENSMUST00000179353.8 |
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| 3UTR-3UTR CCA 90 bp | AGAGCACCACCCAATCACAAGCCTGGGGTTGGATCCATGCCAGCCAAGGACTATGTGCTTCATTGTGGATaGGTGCCCTTCCTTCCACAG | + |
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Preference number: 2 (lower is better) Translates to: RAPPNHKPGVGSMPAKDYVLHCG*VPFLPQ Trigger: CTGTGGAAGGAAGGGCACCCATCCACAATGAAGCAC...ATAGTCCTTGGCTGGCATGGATCCAACCCCAGGCTTGTGATTGGGTGGTGCTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000027495.15 ENSMUST00000168776.8 ENSMUST00000172165.8 ENSMUST00000179353.8 |
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| 3UTR-3UTR CCA 90 bp | CCTGGCAGGCATCTGGGCTTCAAGTGGCCTTTTGTTCAAGAGCACCACCCAATCACAGGTGCTTCATTGTaGATGGGTGCCCTTCCTTCC | + |
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Preference number: 2 (lower is better) Translates to: PGRHLGFKWPFVQEHHPITGASL*MGALPS Trigger: GGAAGGAAGGGCACCCATCCACAATGAAGCACCTGT...GATTGGGTGGTGCTCTTGAACAAAAGGCCACTTGAAGCCCAGATGCCTGCCAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000027495.15 ENSMUST00000168776.8 ENSMUST00000172165.8 ENSMUST00000179353.8 |
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| 3UTR-3UTR GCA 90 bp | AGCCTGGGGTTGGATCCATGCCAGCCAAGGACTATGATTTCCACTGCTATGACCTTCATTGTGGATGGGTaGCCTTCCTTCCACAGGGCT | + |
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Preference number: 2 (lower is better) Translates to: SLGLDPCQPRTMISTAMTFIVDG*PSFHRA Trigger: AGCCCTGTGGAAGGAAGGGCACCCATCCACAATGAA...GGTCATAGCAGTGGAAATCATAGTCCTTGGCTGGCATGGATCCAACCCCAGGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000027495.15 ENSMUST00000168776.8 ENSMUST00000172165.8 ENSMUST00000179353.8 |
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| 3UTR CAA 90 bp | GAGTTAGACGAAAACCTGGCAGGCATCTGGGCTTCAAGTGGCCTTTaGTTCAAGAGCACCACCCAATCACAAGCCTGGGGTTGGATCCAT | + |
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Preference number: 2 (lower is better) Translates to: ELDENLAGIWASSGL*FKSTTQSQAWGWIH Trigger: ATGGATCCAACCCCAGGCTTGTGATTGGGTGGTGCTCTTGAACAAAAGGCCACTTGAAGCCCAGATGCCTGCCAGGTTTTCGTCTAACTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000027495.15 ENSMUST00000168776.8 ENSMUST00000172165.8 ENSMUST00000179353.8 |
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| 3UTR-3UTR TCA 90 bp | CTGCTTTTCAATGAAAGGTTACTAACACAGCTAACAGCAGCGGACTTGAGAGAGAGTCACAGTCATGGCTaGGCTGGCAGTGAGCCCGCC | + |
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Preference number: 2 (lower is better) Translates to: LLFNERLLTQLTAADLRESHSHG*AGSEPA Trigger: GGCGGGCTCACTGCCAGCTCAGCCATGACTGTGACT...CTCTCTCAAGTCCGCTGCTGTTAGCTGTGTTAGTAACCTTTCATTGAAAAGCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000157021.2 |
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| 3UTR-3UTR CCA 90 bp | AGAGCACCACCCAATCACAAGCCTGGGGTTGGATCCATGCCAGCCAAGGACTATTCATACCAAAGGAGTTaGGGGGTTGAGGGCAGAAAA | + |
|
Preference number: 2 (lower is better) Translates to: RAPPNHKPGVGSMPAKDYSYQRS*GVEGRK Trigger: TTTTCTGCCCTCAACCCCCCAACTCCTTTGGTATGA...ATAGTCCTTGGCTGGCATGGATCCAACCCCAGGCTTGTGATTGGGTGGTGCTCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000027495.15 ENSMUST00000168776.8 ENSMUST00000172165.8 ENSMUST00000179353.8 |
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| 3UTR-3UTR CCA 90 bp | AGCCTGGGGTTGGATCCATGCCAGCCAAGGACTATGATTTCCACTGCTATGACCTCATACCAAAGGAGTTaGGGGGTTGAGGGCAGAAAA | + |
|
Preference number: 2 (lower is better) Translates to: SLGLDPCQPRTMISTAMTSYQRS*GVEGRK Trigger: TTTTCTGCCCTCAACCCCCCAACTCCTTTGGTATGA...GGTCATAGCAGTGGAAATCATAGTCCTTGGCTGGCATGGATCCAACCCCAGGCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000027495.15 ENSMUST00000168776.8 ENSMUST00000172165.8 ENSMUST00000179353.8 |
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| 3UTR-3UTR GCA 90 bp | TTGGATCCATGCCAGCCAAGGACTATGATTTCCACTGCTATGACCTTTTGCACCTTCATTGTGGATGGGTaGCCTTCCTTCCACAGGGCT | + |
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Preference number: 2 (lower is better) Translates to: LDPCQPRTMISTAMTFCTFIVDG*PSFHRA Trigger: AGCCCTGTGGAAGGAAGGGCACCCATCCACAATGAA...GGTGCAAAAGGTCATAGCAGTGGAAATCATAGTCCTTGGCTGGCATGGATCCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000027495.15 ENSMUST00000168776.8 ENSMUST00000172165.8 ENSMUST00000179353.8 |
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| 3UTR-3UTR CCA 90 bp | TTGGATCCATGCCAGCCAAGGACTATGATTTCCACTGCTATGACCTTTTGCACCACAGGTGCTTCATTGTaGATGGGTGCCCTTCCTTCC | + |
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Preference number: 2 (lower is better) Translates to: LDPCQPRTMISTAMTFCTTGASL*MGALPS Trigger: GGAAGGAAGGGCACCCATCCACAATGAAGCACCTGT...GGTGCAAAAGGTCATAGCAGTGGAAATCATAGTCCTTGGCTGGCATGGATCCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000027495.15 ENSMUST00000168776.8 ENSMUST00000172165.8 ENSMUST00000179353.8 |
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| 3UTR-3UTR CCA 90 bp | CTGCCTGACATTAGAAGACAGGGTAGAAGAGGGAAGTGCCAGAATATAAACCAGTCACAAGCCTGGGGTTaGATCCATGCCAGCCAAGGA | + |
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Preference number: 2 (lower is better) Translates to: LPDIRRQGRRGKCQNINQSQAWG*IHASQG Trigger: TCCTTGGCTGGCATGGATCCAACCCCAGGCTTGTGA...CTGGTTTATATTCTGGCACTTCCCTCTTCTACCCTGTCTTCTAATGTCAGGCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000027495.15 ENSMUST00000168776.8 ENSMUST00000172165.8 ENSMUST00000179353.8 |
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| 3UTR-3UTR GCA 90 bp | AGCCTGGGGTTGGATCCATGCCAGCCAAGGACTATGATTTCCACTGCTATGACCATTTGCCACCAAGTATaGACAACCACTTCTGTCACA | + |
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Preference number: 2 (lower is better) Translates to: SLGLDPCQPRTMISTAMTICHQV*TTTSVT Trigger: TGTGACAGAAGTGGTTGTGCATACTTGGTGGCAAAT...GGTCATAGCAGTGGAAATCATAGTCCTTGGCTGGCATGGATCCAACCCCAGGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000027495.15 ENSMUST00000168776.8 ENSMUST00000172165.8 ENSMUST00000179353.8 |
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| 3UTR-3UTR CCA 90 bp | CTGCCTGACATTAGAAGACAGGGTAGAAGAGGGAAGTGCCAGAATATAAACCAGGTGCTTCATTGTGGATaGGTGCCCTTCCTTCCACAG | + |
|
Preference number: 2 (lower is better) Translates to: LPDIRRQGRRGKCQNINQVLHCG*VPFLPQ Trigger: CTGTGGAAGGAAGGGCACCCATCCACAATGAAGCAC...CTGGTTTATATTCTGGCACTTCCCTCTTCTACCCTGTCTTCTAATGTCAGGCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000027495.15 ENSMUST00000168776.8 ENSMUST00000172165.8 ENSMUST00000179353.8 |
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| 3UTR-3UTR GCA 90 bp | AGAGCACCACCCAATCACAAGCCTGGGGTTGGATCCATGCCAGCCAAGGACTATAGTAAGCAAATAATTTaGCACCAAGTATGCACAACC | + |
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Preference number: 2 (lower is better) Translates to: RAPPNHKPGVGSMPAKDYSKQII*HQVCTT Trigger: GGTTGTGCATACTTGGTGGCAAATTATTTGCTTACT...ATAGTCCTTGGCTGGCATGGATCCAACCCCAGGCTTGTGATTGGGTGGTGCTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000027495.15 ENSMUST00000168776.8 ENSMUST00000172165.8 ENSMUST00000179353.8 |
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| 3UTR-3UTR GCA 90 bp | CATCTTATTAGTACTACTGAGTTTTGGACTGAATTAAACGTAAATCCCTGCCTCAACCAGGCAGGACTCTaGTTGCCTGCTTGGGGCACA | + |
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Preference number: 2 (lower is better) Translates to: HLISTTEFWTELNVNPCLNQAGL*LPAWGT Trigger: TGTGCCCCAAGCAGGCAAGCAGAGTCCTGCCTGGTT...GAGGCAGGGATTTACGTTTAATTCAGTCCAAAACTCAGTAGTACTAATAAGATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000027495.15 ENSMUST00000168776.8 ENSMUST00000172165.8 ENSMUST00000179353.8 |
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| 3UTR-3UTR TCA 90 bp | ATTTCTTTTGGAGTATCTGGGTTATCTCTGATGAAAATATACGCAGCACGCCTGCTTGGGGCACAGATCTaGAAAGCCTTTCGTTCATGG | + |
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Preference number: 2 (lower is better) Translates to: ISFGVSGLSLMKIYAARLLGAQI*KAFRSW Trigger: CCATGAACGAAAGGCTTTTCAGATCTGTGCCCCAAG...CAGGCGTGCTGCGTATATTTTCATCAGAGATAACCCAGATACTCCAAAAGAAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000027495.15 |
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| 3UTR-3UTR GCA 90 bp | CATCTTATTAGTACTACTGAGTTTTGGACTGAATTAAACGTAAATCCCTGCCTCACTGCCTCCTTCACCTaGCCCTTCCCTTCTAAGGTC | + |
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Preference number: 2 (lower is better) Translates to: HLISTTEFWTELNVNPCLTASFT*PFPSKV Trigger: GACCTTAGAAGGGAAGGGGCAGGTGAAGGAGGCAGT...GAGGCAGGGATTTACGTTTAATTCAGTCCAAAACTCAGTAGTACTAATAAGATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000027495.15 ENSMUST00000168776.8 ENSMUST00000172165.8 ENSMUST00000179353.8 |
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| 3UTR-3UTR CCA 90 bp | CATCTTATTAGTACTACTGAGTTTTGGACTGAATTAAACGTAAATCCCTGCCTCTCACAAGCCTGGGGTTaGATCCATGCCAGCCAAGGA | + |
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Preference number: 2 (lower is better) Translates to: HLISTTEFWTELNVNPCLSQAWG*IHASQG Trigger: TCCTTGGCTGGCATGGATCCAACCCCAGGCTTGTGA...GAGGCAGGGATTTACGTTTAATTCAGTCCAAAACTCAGTAGTACTAATAAGATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000027495.15 ENSMUST00000168776.8 ENSMUST00000172165.8 ENSMUST00000179353.8 |
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| 3UTR-3UTR CCA 90 bp | CTGCCTGACATTAGAAGACAGGGTAGAAGAGGGAAGTGCCAGAATATAAACCAGGAAAATGACAGTGCCTaGAAACAGATGAGACAGTCT | + |
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Preference number: 2 (lower is better) Translates to: LPDIRRQGRRGKCQNINQENDSA*KQMRQS Trigger: AGACTGTCTCATCTGTTTCCAGGCACTGTCATTTTC...CTGGTTTATATTCTGGCACTTCCCTCTTCTACCCTGTCTTCTAATGTCAGGCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000027495.15 ENSMUST00000168776.8 ENSMUST00000172165.8 ENSMUST00000179353.8 |
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| 3UTR-3UTR GCA 90 bp | TCCAACAAACTTAATGTCAAAATAAGCCAAACAAAGGACTGCATGGGTACTCTATTCATTGTGGATGGGTaGCCTTCCTTCCACAGGGCT | + |
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Preference number: 2 (lower is better) Translates to: SNKLNVKISQTKDCMGTLFIVDG*PSFHRA Trigger: AGCCCTGTGGAAGGAAGGGCACCCATCCACAATGAA...TAGAGTACCCATGCAGTCCTTTGTTTGGCTTATTTTGACATTAAGTTTGTTGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000027495.15 ENSMUST00000168776.8 ENSMUST00000172165.8 ENSMUST00000179353.8 |
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| 3UTR-3UTR GCA 90 bp | TTGGATCCATGCCAGCCAAGGACTATGATTTCCACTGCTATGACCTTTTGCACCAGTAAGCAAATAATTTaGCACCAAGTATGCACAACC | + |
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Preference number: 2 (lower is better) Translates to: LDPCQPRTMISTAMTFCTSKQII*HQVCTT Trigger: GGTTGTGCATACTTGGTGGCAAATTATTTGCTTACT...GGTGCAAAAGGTCATAGCAGTGGAAATCATAGTCCTTGGCTGGCATGGATCCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000027495.15 ENSMUST00000168776.8 ENSMUST00000172165.8 ENSMUST00000179353.8 |
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| 3UTR-3UTR GCA 90 bp | CATCTTATTAGTACTACTGAGTTTTGGACTGAATTAAACGTAAATCCCTGCCTCAGGACTCTGCTTGCCTaGTTGGGGCACAGATCTGAA | + |
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Preference number: 2 (lower is better) Translates to: HLISTTEFWTELNVNPCLRTLLA*LGHRSE Trigger: TTCAGATCTGTGCCCCAAGCAGGCAAGCAGAGTCCT...GAGGCAGGGATTTACGTTTAATTCAGTCCAAAACTCAGTAGTACTAATAAGATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000027495.15 ENSMUST00000168776.8 ENSMUST00000172165.8 ENSMUST00000179353.8 |
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| 3UTR-3UTR CCA 90 bp | ACAAGTACAAGTTACTTCTTAGTGAAAGAGCAAGTATCTGTTAGCAAAAGCAGTTCACAAGCCTGGGGTTaGATCCATGCCAGCCAAGGA | + |
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Preference number: 2 (lower is better) Translates to: TSTSYFLVKEQVSVSKSSSQAWG*IHASQG Trigger: TCCTTGGCTGGCATGGATCCAACCCCAGGCTTGTGA...ACTGCTTTTGCTAACAGATACTTGCTCTTTCACTAAGAAGTAACTTGTACTTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000027495.15 ENSMUST00000168776.8 ENSMUST00000172165.8 ENSMUST00000179353.8 |
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| 3UTR-3UTR CCA 90 bp | ACAAGTACAAGTTACTTCTTAGTGAAAGAGCAAGTATCTGTTAGCAAAAGCAGTACCCAATCACAAGCCTaGGGTTGGATCCATGCCAGC | + |
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Preference number: 2 (lower is better) Translates to: TSTSYFLVKEQVSVSKSSTQSQA*GWIHAS Trigger: GCTGGCATGGATCCAACCCCAGGCTTGTGATTGGGT...ACTGCTTTTGCTAACAGATACTTGCTCTTTCACTAAGAAGTAACTTGTACTTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000027495.15 ENSMUST00000168776.8 ENSMUST00000172165.8 ENSMUST00000179353.8 |
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| 3UTR-3UTR CCA 90 bp | AAAGAGTACTTGTCAGTGATTAGTCAGGCCAGCTATATCATAGAAATTCACTATACAGGTGCTTCATTGTaGATGGGTGCCCTTCCTTCC | + |
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Preference number: 2 (lower is better) Translates to: KEYLSVISQASYIIEIHYTGASL*MGALPS Trigger: GGAAGGAAGGGCACCCATCCACAATGAAGCACCTGT...ATAGTGAATTTCTATGATATAGCTGGCCTGACTAATCACTGACAAGTACTCTTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000027495.15 ENSMUST00000168776.8 ENSMUST00000172165.8 ENSMUST00000179353.8 |
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| 3UTR-3UTR TCA 90 bp | ACAAGTACAAGTTACTTCTTAGTGAAAGAGCAAGTATCTGTTAGCAAAAGCAGTCTTGGGGCACAGATCTaGAAAGCCTTTCGTTCATGG | + |
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Preference number: 2 (lower is better) Translates to: TSTSYFLVKEQVSVSKSSLGAQI*KAFRSW Trigger: CCATGAACGAAAGGCTTTTCAGATCTGTGCCCCAAG...ACTGCTTTTGCTAACAGATACTTGCTCTTTCACTAAGAAGTAACTTGTACTTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000027495.15 ENSMUST00000168776.8 ENSMUST00000172165.8 ENSMUST00000179353.8 |
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| 3UTR-3UTR TCA 90 bp | ACAAGTACAAGTTACTTCTTAGTGAAAGAGCAAGTATCTGTTAGCAAAAGCAGTTCCTCCTGCAGCAAATaGAAGCACACAGTTAGCACC | + |
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Preference number: 2 (lower is better) Translates to: TSTSYFLVKEQVSVSKSSSSCSK*KHTVST Trigger: GGTGCTAACTGTGTGCTTTCATTTGCTGCAGGAGGA...ACTGCTTTTGCTAACAGATACTTGCTCTTTCACTAAGAAGTAACTTGTACTTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000027495.15 ENSMUST00000168776.8 ENSMUST00000172165.8 ENSMUST00000179353.8 |
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| 3UTR-3UTR TCA 90 bp | CATCTTATTAGTACTACTGAGTTTTGGACTGAATTAAACGTAAATCCCTGCCTCGTGCCTGGAAACAGATaGGACAGTCTGCACATAAAA | + |
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Preference number: 2 (lower is better) Translates to: HLISTTEFWTELNVNPCLVPGNR*DSLHIK Trigger: TTTTATGTGCAGACTGTCTCATCTGTTTCCAGGCAC...GAGGCAGGGATTTACGTTTAATTCAGTCCAAAACTCAGTAGTACTAATAAGATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000027495.15 ENSMUST00000168776.8 ENSMUST00000172165.8 ENSMUST00000179353.8 |
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| 3UTR-3UTR TCA 90 bp | TCCAACAAACTTAATGTCAAAATAAGCCAAACAAAGGACTGCATGGGTACTCTAGTGCCTGGAAACAGATaGGACAGTCTGCACATAAAA | + |
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Preference number: 2 (lower is better) Translates to: SNKLNVKISQTKDCMGTLVPGNR*DSLHIK Trigger: TTTTATGTGCAGACTGTCTCATCTGTTTCCAGGCAC...TAGAGTACCCATGCAGTCCTTTGTTTGGCTTATTTTGACATTAAGTTTGTTGGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000027495.15 ENSMUST00000168776.8 ENSMUST00000172165.8 ENSMUST00000179353.8 |
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| 3UTR-3UTR GCA 90 bp | TCCAACAAACTTAATGTCAAAATAAGCCAAACAAAGGACTGCATGGGTACTCTAGGTAGAAGAGGGAAGTaGCAGAATATAAACCAGGCA | + |
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Preference number: 2 (lower is better) Translates to: SNKLNVKISQTKDCMGTLGRRGK*QNINQA Trigger: TGCCTGGTTTATATTCTGGCACTTCCCTCTTCTACC...TAGAGTACCCATGCAGTCCTTTGTTTGGCTTATTTTGACATTAAGTTTGTTGGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000027495.15 ENSMUST00000168776.8 ENSMUST00000172165.8 ENSMUST00000179353.8 |
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| 3UTR-3UTR CCA 90 bp | ACAAGTACAAGTTACTTCTTAGTGAAAGAGCAAGTATCTGTTAGCAAAAGCAGTTCATACCAAAGGAGTTaGGGGGTTGAGGGCAGAAAA | + |
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Preference number: 2 (lower is better) Translates to: TSTSYFLVKEQVSVSKSSSYQRS*GVEGRK Trigger: TTTTCTGCCCTCAACCCCCCAACTCCTTTGGTATGA...ACTGCTTTTGCTAACAGATACTTGCTCTTTCACTAAGAAGTAACTTGTACTTGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000027495.15 ENSMUST00000168776.8 ENSMUST00000172165.8 ENSMUST00000179353.8 |
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| 3UTR-3UTR CCA 90 bp | AAAGAGTACTTGTCAGTGATTAGTCAGGCCAGCTATATCATAGAAATTCACTATTCATACCAAAGGAGTTaGGGGGTTGAGGGCAGAAAA | + |
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Preference number: 2 (lower is better) Translates to: KEYLSVISQASYIIEIHYSYQRS*GVEGRK Trigger: TTTTCTGCCCTCAACCCCCCAACTCCTTTGGTATGA...ATAGTGAATTTCTATGATATAGCTGGCCTGACTAATCACTGACAAGTACTCTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000027495.15 ENSMUST00000168776.8 ENSMUST00000172165.8 ENSMUST00000179353.8 |
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| 3UTR-3UTR TCA 90 bp | ACAAGTACAAGTTACTTCTTAGTGAAAGAGCAAGTATCTGTTAGCAAAAGCAGTGTGCCTGGAAACAGATaGGACAGTCTGCACATAAAA | + |
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Preference number: 2 (lower is better) Translates to: TSTSYFLVKEQVSVSKSSVPGNR*DSLHIK Trigger: TTTTATGTGCAGACTGTCTCATCTGTTTCCAGGCAC...ACTGCTTTTGCTAACAGATACTTGCTCTTTCACTAAGAAGTAACTTGTACTTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000027495.15 ENSMUST00000168776.8 ENSMUST00000172165.8 ENSMUST00000179353.8 |
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| 3UTR-3UTR GCA 90 bp | CATCTTATTAGTACTACTGAGTTTTGGACTGAATTAAACGTAAATCCCTGCCTCATTTGCCACCAAGTATaGACAACCACTTCTGTCACA | + |
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Preference number: 2 (lower is better) Translates to: HLISTTEFWTELNVNPCLICHQV*TTTSVT Trigger: TGTGACAGAAGTGGTTGTGCATACTTGGTGGCAAAT...GAGGCAGGGATTTACGTTTAATTCAGTCCAAAACTCAGTAGTACTAATAAGATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000027495.15 ENSMUST00000168776.8 ENSMUST00000172165.8 ENSMUST00000179353.8 |
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| 3UTR-3UTR CCA 90 bp | CATCTTATTAGTACTACTGAGTTTTGGACTGAATTAAACGTAAATCCCTGCCTCGAAAATGACAGTGCCTaGAAACAGATGAGACAGTCT | + |
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Preference number: 2 (lower is better) Translates to: HLISTTEFWTELNVNPCLENDSA*KQMRQS Trigger: AGACTGTCTCATCTGTTTCCAGGCACTGTCATTTTC...GAGGCAGGGATTTACGTTTAATTCAGTCCAAAACTCAGTAGTACTAATAAGATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000027495.15 ENSMUST00000168776.8 ENSMUST00000172165.8 ENSMUST00000179353.8 |
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| 3UTR-3UTR GCA 90 bp | CCTTATAAAGAGTCTTGTTACAATATGAAGCTGGAGCTCATAGCTGCTTTGGTTAGTAAGCAAATAATTTaGCACCAAGTATGCACAACC | + |
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Preference number: 2 (lower is better) Translates to: PYKESCYNMKLELIAALVSKQII*HQVCTT Trigger: GGTTGTGCATACTTGGTGGCAAATTATTTGCTTACT...AACCAAAGCAGCTATGAGCTCCAGCTTCATATTGTAACAAGACTCTTTATAAGG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000027495.15 ENSMUST00000168776.8 ENSMUST00000172165.8 ENSMUST00000179353.8 |
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| 3UTR-3UTR GCA 90 bp | ACAAGTACAAGTTACTTCTTAGTGAAAGAGCAAGTATCTGTTAGCAAAAGCAGTAGTAAGCAAATAATTTaGCACCAAGTATGCACAACC | + |
|
Preference number: 2 (lower is better) Translates to: TSTSYFLVKEQVSVSKSSSKQII*HQVCTT Trigger: GGTTGTGCATACTTGGTGGCAAATTATTTGCTTACT...ACTGCTTTTGCTAACAGATACTTGCTCTTTCACTAAGAAGTAACTTGTACTTGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000027495.15 ENSMUST00000168776.8 ENSMUST00000172165.8 ENSMUST00000179353.8 |
||
| 3UTR TCA 72 bp | GTCATAGGGGAGTCACAGTCATGGCTGAGCTGGCAGTaGGCCCGCCCTCCCTCCCCACTTACCAATATGAAA | + |
|
Preference number: 3 (lower is better) Translates to: VIGESQSWLSWQ*ARPPSPLTNMK Trigger: TTTCATATTGGTAAGTGGGGAGGGAGGGCGGGCTCACTGCCAGCTCAGCCATGACTGTGACTCCCCTATGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000157021.2 |
||
| 3UTR GCA 72 bp | GAGCACCACCCAATCACAAGCCTGGGGTTGGATCCATaGCAGCCAAGGACTATGATTTCCACTGCTATGACC | + |
|
Preference number: 3 (lower is better) Translates to: EHHPITSLGLDP*QPRTMISTAMT Trigger: GGTCATAGCAGTGGAAATCATAGTCCTTGGCTGGCATGGATCCAACCCCAGGCTTGTGATTGGGTGGTGCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000027495.15 ENSMUST00000168776.8 ENSMUST00000172165.8 ENSMUST00000179353.8 |
||
| 3UTR-3UTR CAA 90 bp | AACGTAAATCCCTGCCTCATCATCAATCAAGTCCTTCCTCCTGCAGCAAATGAACAGGCAGGACTCTGCTaGCCTGCTTGGGGCACAGAT | + |
|
Preference number: 3 (lower is better) Translates to: NVNPCLIINQVLPPAANEQAGLC*PAWGTD Trigger: ATCTGTGCCCCAAGCAGGCAAGCAGAGTCCTGCCTG...TTCATTTGCTGCAGGAGGAAGGACTTGATTGATGATGAGGCAGGGATTTACGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000027495.15 ENSMUST00000168776.8 ENSMUST00000172165.8 ENSMUST00000179353.8 |
||
| 3UTR GCA 72 bp | GAAATCCTCAGACACAGGTGCTTCATTGTGGATGGGTaGCCTTCCTTCCACAGGGCTAAGAACCTTGATGCT | + |
|
Preference number: 3 (lower is better) Translates to: EILRHRCFIVDG*PSFHRAKNLDA Trigger: AGCATCAAGGTTCTTAGCCCTGTGGAAGGAAGGGCACCCATCCACAATGAAGCACCTGTGTCTGAGGATTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000027495.15 ENSMUST00000168776.8 ENSMUST00000172165.8 ENSMUST00000179353.8 |
||
| 3UTR GCA 72 bp | AGAGGGAAGTGCCAGAATATAAACCAGGCAGGACTCTaGTTGCCTGCTTGGGGCACAGATCTGAAAAGCCTT | + |
|
Preference number: 3 (lower is better) Translates to: RGKCQNINQAGL*LPAWGTDLKSL Trigger: AAGGCTTTTCAGATCTGTGCCCCAAGCAGGCAAGCAGAGTCCTGCCTGGTTTATATTCTGGCACTTCCCTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000027495.15 ENSMUST00000168776.8 ENSMUST00000172165.8 ENSMUST00000179353.8 |
||
| 3UTR CCA 72 bp | AACCAACTGAAATCCTCAGACACAGGTGCTTCATTGTaGATGGGTGCCCTTCCTTCCACAGGGCTAAGAACC | + |
|
Preference number: 3 (lower is better) Translates to: NQLKSSDTGASL*MGALPSTGLRT Trigger: GGTTCTTAGCCCTGTGGAAGGAAGGGCACCCATCCACAATGAAGCACCTGTGTCTGAGGATTTCAGTTGGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000027495.15 ENSMUST00000168776.8 ENSMUST00000172165.8 ENSMUST00000179353.8 |
||
| 3UTR CCA 72 bp | GTTAGACGAAAACCTGGCAGGCATCTGGGCTTCAAGTaGCCTTTTGTTCAAGAGCACCACCCAATCACAAGC | + |
|
Preference number: 3 (lower is better) Translates to: VRRKPGRHLGFK*PFVQEHHPITS Trigger: GCTTGTGATTGGGTGGTGCTCTTGAACAAAAGGCCACTTGAAGCCCAGATGCCTGCCAGGTTTTCGTCTAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000027495.15 ENSMUST00000168776.8 ENSMUST00000172165.8 ENSMUST00000179353.8 |
||
| 3UTR GCA 72 bp | GTGCCAGAATATAAACCAGGCAGGACTCTGCTTGCCTaGTTGGGGCACAGATCTGAAAAGCCTTTCGTTCAT | + |
|
Preference number: 3 (lower is better) Translates to: VPEYKPGRTLLA*LGHRSEKPFVH Trigger: ATGAACGAAAGGCTTTTCAGATCTGTGCCCCAAGCAGGCAAGCAGAGTCCTGCCTGGTTTATATTCTGGCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000027495.15 ENSMUST00000168776.8 ENSMUST00000172165.8 ENSMUST00000179353.8 |
||
| 3UTR GCA 72 bp | CTGCCTGACATTAGAAGACAGGGTAGAAGAGGGAAGTaGCAGAATATAAACCAGGCAGGACTCTGCTTGCCT | + |
|
Preference number: 3 (lower is better) Translates to: LPDIRRQGRRGK*QNINQAGLCLP Trigger: AGGCAAGCAGAGTCCTGCCTGGTTTATATTCTGGCACTTCCCTCTTCTACCCTGTCTTCTAATGTCAGGCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000027495.15 ENSMUST00000168776.8 ENSMUST00000172165.8 ENSMUST00000179353.8 |
||
| 3UTR CCA 72 bp | CAGAATATAAACCAGGCAGGACTCTGCTTGCCTGCTTaGGGCACAGATCTGAAAAGCCTTTCGTTCATGGTG | + |
|
Preference number: 3 (lower is better) Translates to: QNINQAGLCLPA*GTDLKSLSFMV Trigger: CACCATGAACGAAAGGCTTTTCAGATCTGTGCCCCAAGCAGGCAAGCAGAGTCCTGCCTGGTTTATATTCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000027495.15 ENSMUST00000168776.8 ENSMUST00000172165.8 ENSMUST00000179353.8 |
||
| 3UTR-3UTR CAA 90 bp | CCTGGCAGGCATCTGGGCTTCAAGTGGCCTTTTGTTCAAGAGCACCACCCAATCACTACAGCAGCAAAATaGGTTTTAGGTGTTCTGTAC | + |
|
Preference number: 3 (lower is better) Translates to: PGRHLGFKWPFVQEHHPITTAAK*VLGVLY Trigger: GTACAGAACACCTAAAACCAATTTTGCTGCTGTAGT...GATTGGGTGGTGCTCTTGAACAAAAGGCCACTTGAAGCCCAGATGCCTGCCAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000027495.15 ENSMUST00000168776.8 ENSMUST00000172165.8 ENSMUST00000179353.8 |
||
| 3UTR-3UTR CAA 90 bp | CTGCCTGACATTAGAAGACAGGGTAGAAGAGGGAAGTGCCAGAATATAAACCAGACTCTGCTTGCCTGCTaGGGGCACAGATCTGAAAAG | + |
|
Preference number: 3 (lower is better) Translates to: LPDIRRQGRRGKCQNINQTLLAC*GHRSEK Trigger: CTTTTCAGATCTGTGCCCCAAGCAGGCAAGCAGAGT...CTGGTTTATATTCTGGCACTTCCCTCTTCTACCCTGTCTTCTAATGTCAGGCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000027495.15 ENSMUST00000168776.8 ENSMUST00000172165.8 ENSMUST00000179353.8 |
||
| 3UTR-3UTR CAA 90 bp | GCCTTTCGTTCATGGTGTGAAGACATTTATACTACACACACTGAAGAAAATGACATCACAAGCCTGGGGTaGGATCCATGCCAGCCAAGG | + |
|
Preference number: 3 (lower is better) Translates to: AFRSWCEDIYTTHTEENDITSLG*DPCQPR Trigger: CCTTGGCTGGCATGGATCCAACCCCAGGCTTGTGAT...GTCATTTTCTTCAGTGTGTGTAGTATAAATGTCTTCACACCATGAACGAAAGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000027495.15 ENSMUST00000168776.8 ENSMUST00000172165.8 ENSMUST00000179353.8 |
||
| 3UTR-3UTR CAA 90 bp | CATCTTATTAGTACTACTGAGTTTTGGACTGAATTAAACGTAAATCCCTGCCTCCAGGCAGGACTCTGCTaGCCTGCTTGGGGCACAGAT | + |
|
Preference number: 3 (lower is better) Translates to: HLISTTEFWTELNVNPCLQAGLC*PAWGTD Trigger: ATCTGTGCCCCAAGCAGGCAAGCAGAGTCCTGCCTG...GAGGCAGGGATTTACGTTTAATTCAGTCCAAAACTCAGTAGTACTAATAAGATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000027495.15 ENSMUST00000168776.8 ENSMUST00000172165.8 ENSMUST00000179353.8 |
||
| 3UTR-3UTR CAA 90 bp | TCCAACAAACTTAATGTCAAAATAAGCCAAACAAAGGACTGCATGGGTACTCTACAGGCAGGACTCTGCTaGCCTGCTTGGGGCACAGAT | + |
|
Preference number: 3 (lower is better) Translates to: SNKLNVKISQTKDCMGTLQAGLC*PAWGTD Trigger: ATCTGTGCCCCAAGCAGGCAAGCAGAGTCCTGCCTG...TAGAGTACCCATGCAGTCCTTTGTTTGGCTTATTTTGACATTAAGTTTGTTGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000027495.15 ENSMUST00000168776.8 ENSMUST00000172165.8 ENSMUST00000179353.8 |
||
| 3UTR TCA 72 bp | CCTCATCATCAATCAAGTCCTTCCTCCTGCAGCAAATaGAAGCACACAGTTAGCACCTGCTTTGCTTCTCCA | + |
|
Preference number: 3 (lower is better) Translates to: PHHQSSPSSCSK*KHTVSTCFASP Trigger: TGGAGAAGCAAAGCAGGTGCTAACTGTGTGCTTTCATTTGCTGCAGGAGGAAGGACTTGATTGATGATGAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000027495.15 ENSMUST00000168776.8 ENSMUST00000172165.8 ENSMUST00000179353.8 |
||
| 3UTR-3UTR CAA 90 bp | TCCAACAAACTTAATGTCAAAATAAGCCAAACAAAGGACTGCATGGGTACTCTAATCACAAGCCTGGGGTaGGATCCATGCCAGCCAAGG | + |
|
Preference number: 3 (lower is better) Translates to: SNKLNVKISQTKDCMGTLITSLG*DPCQPR Trigger: CCTTGGCTGGCATGGATCCAACCCCAGGCTTGTGAT...TAGAGTACCCATGCAGTCCTTTGTTTGGCTTATTTTGACATTAAGTTTGTTGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000027495.15 ENSMUST00000168776.8 ENSMUST00000172165.8 ENSMUST00000179353.8 |
||
| 3UTR TCA 72 bp | AGTAGGTGGCAGCAGAGACTAGTTTCTGCTTTTCAATaGAAGGTTACTAACACAGCTAACAGCAGCGGACTT | + |
|
Preference number: 3 (lower is better) Translates to: SRWQQRLVSAFQ*KVTNTANSSGL Trigger: AAGTCCGCTGCTGTTAGCTGTGTTAGTAACCTTTCATTGAAAAGCAGAAACTAGTCTCTGCTGCCACCTACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000157021.2 |
||
| 3UTR TCA 72 bp | GAACTTCACACAATGAACTTCCCTGATCACTCACAGTaGTGCAATGTGAAGAGGCAAAGCGAGCAAATGTAT | + |
|
Preference number: 3 (lower is better) Translates to: ELHTMNFPDHSQ*CNVKRQSEQMY Trigger: ATACATTTGCTCGCTTTGCCTCTTCACATTGCATCACTGTGAGTGATCAGGGAAGTTCATTGTGTGAAGTTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000027495.15 ENSMUST00000168776.8 ENSMUST00000172165.8 ENSMUST00000179353.8 |
||
| 3UTR GCA 72 bp | GTTGGATCCATGCCAGCCAAGGACTATGATTTCCACTaGTATGACCTTTTGCACCTAGTTATAGAAAGTACA | + |
|
Preference number: 3 (lower is better) Translates to: VGSMPAKDYDFH*YDLLHLVIEST Trigger: TGTACTTTCTATAACTAGGTGCAAAAGGTCATAGCAGTGGAAATCATAGTCCTTGGCTGGCATGGATCCAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000027495.15 ENSMUST00000168776.8 ENSMUST00000172165.8 ENSMUST00000179353.8 |
||
| 3UTR GCA 72 bp | ACTACTGAGTTTTGGACTGAATTAAACGTAAATCCCTaGCTCATCATCAATCAAGTCCTTCCTCCTGCAGCA | + |
|
Preference number: 3 (lower is better) Translates to: TTEFWTELNVNP*LIINQVLPPAA Trigger: TGCTGCAGGAGGAAGGACTTGATTGATGATGAGGCAGGGATTTACGTTTAATTCAGTCCAAAACTCAGTAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000027495.15 ENSMUST00000168776.8 ENSMUST00000172165.8 ENSMUST00000179353.8 |
||
| 3UTR-3UTR CAA 90 bp | TCCAACAAACTTAATGTCAAAATAAGCCAAACAAAGGACTGCATGGGTACTCTAGCTTCAAGTGGCCTTTaGTTCAAGAGCACCACCCAA | + |
|
Preference number: 3 (lower is better) Translates to: SNKLNVKISQTKDCMGTLASSGL*FKSTTQ Trigger: TTGGGTGGTGCTCTTGAACAAAAGGCCACTTGAAGC...TAGAGTACCCATGCAGTCCTTTGTTTGGCTTATTTTGACATTAAGTTTGTTGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000027495.15 ENSMUST00000168776.8 ENSMUST00000172165.8 ENSMUST00000179353.8 |
||
| 3UTR-3UTR CAA 90 bp | GCCTTTCGTTCATGGTGTGAAGACATTTATACTACACACACTGAAGAAAATGACACTACAGCAGCAAAATaGGTTTTAGGTGTTCTGTAC | + |
|
Preference number: 3 (lower is better) Translates to: AFRSWCEDIYTTHTEENDTTAAK*VLGVLY Trigger: GTACAGAACACCTAAAACCAATTTTGCTGCTGTAGT...GTCATTTTCTTCAGTGTGTGTAGTATAAATGTCTTCACACCATGAACGAAAGGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000027495.15 ENSMUST00000168776.8 ENSMUST00000172165.8 ENSMUST00000179353.8 |
||
| 3UTR GCA 72 bp | TTCAATTCTAGTAAGCAAATAATTTGCCACCAAGTATaGACAACCACTTCTGTCACAGGTACATCAATGTCC | + |
|
Preference number: 3 (lower is better) Translates to: FNSSKQIICHQV*TTTSVTGTSMS Trigger: GGACATTGATGTACCTGTGACAGAAGTGGTTGTGCATACTTGGTGGCAAATTATTTGCTTACTAGAATTGAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000027495.15 ENSMUST00000168776.8 ENSMUST00000172165.8 ENSMUST00000179353.8 |
||
| 3UTR GCA 72 bp | CCTATGAAGTCTTACTGTCCATTTTATCAAGTAGTCTaGAGACAATCTGATAACCTGTACAGCTATAGGATT | + |
|
Preference number: 3 (lower is better) Translates to: PMKSYCPFYQVV*RQSDNLYSYRI Trigger: AATCCTATAGCTGTACAGGTTATCAGATTGTCTGCAGACTACTTGATAAAATGGACAGTAAGACTTCATAGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027495.15 |
||
| 3UTR-3UTR CAA 90 bp | ACAAGTACAAGTTACTTCTTAGTGAAAGAGCAAGTATCTGTTAGCAAAAGCAGTACTACAGCAGCAAAATaGGTTTTAGGTGTTCTGTAC | + |
|
Preference number: 3 (lower is better) Translates to: TSTSYFLVKEQVSVSKSSTTAAK*VLGVLY Trigger: GTACAGAACACCTAAAACCAATTTTGCTGCTGTAGT...ACTGCTTTTGCTAACAGATACTTGCTCTTTCACTAAGAAGTAACTTGTACTTGT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000027495.15 ENSMUST00000168776.8 ENSMUST00000172165.8 ENSMUST00000179353.8 |
||
| 3UTR-3UTR CAA 90 bp | ACAAGTACAAGTTACTTCTTAGTGAAAGAGCAAGTATCTGTTAGCAAAAGCAGTGGTACTCTAAAGTCATaGACGCTTTTCTTGATAGGA | + |
|
Preference number: 3 (lower is better) Translates to: TSTSYFLVKEQVSVSKSSGTLKS*TLFLIG Trigger: TCCTATCAAGAAAAGCGTCAATGACTTTAGAGTACC...ACTGCTTTTGCTAACAGATACTTGCTCTTTCACTAAGAAGTAACTTGTACTTGT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000027495.15 ENSMUST00000168776.8 ENSMUST00000172165.8 ENSMUST00000179353.8 |
||
| 3UTR CCA 72 bp | ATGCTTAAGCTTCATCTTATTAGTACTACTGAGTTTTaGACTGAATTAAACGTAAATCCCTGCCTCATCATC | + |
|
Preference number: 3 (lower is better) Translates to: MLKLHLISTTEF*TELNVNPCLII Trigger: GATGATGAGGCAGGGATTTACGTTTAATTCAGTCCAAAACTCAGTAGTACTAATAAGATGAAGCTTAAGCAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000027495.15 ENSMUST00000168776.8 ENSMUST00000172165.8 ENSMUST00000179353.8 |
||
| CDS-3UTR GCA 90 bp | AGGGGAGTCACAGTCATGGCTGAGCTGGCAGTGAGCCCGCCCTCCCTCCCCACTCAATCATCTCTTGCATaGGGCGGAGCTCAGCCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: RGVTVMAELAVSPPSLPTQSSLA*GGAQPP Trigger: AGGAGGCTGAGCTCCGCCGCATGCAAGAGATGATTG...AGTGGGGAGGGAGGGCGGGCTCACTGCCAGCTCAGCCATGACTGTGACTCCCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000157021.2 |
||
| CDS-3UTR GCA 90 bp | CCTGGCAGGCATCTGGGCTTCAAGTGGCCTTTTGTTCAAGAGCACCACCCAATCCAATCATCTCTTGCATaGGGCGGAGCTCAGCCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: PGRHLGFKWPFVQEHHPIQSSLA*GGAQPP Trigger: AGGAGGCTGAGCTCCGCCGCATGCAAGAGATGATTG...GATTGGGTGGTGCTCTTGAACAAAAGGCCACTTGAAGCCCAGATGCCTGCCAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000027495.15 ENSMUST00000168776.8 ENSMUST00000172165.8 ENSMUST00000179353.8 |
||
| CDS-3UTR GCA 90 bp | CACAGGTGCTTCATTGTGGATGGGTGCCCTTCCTTCCACAGGGCTAAGAACCTTCAATCATCTCTTGCATaGGGCGGAGCTCAGCCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: HRCFIVDGCPSFHRAKNLQSSLA*GGAQPP Trigger: AGGAGGCTGAGCTCCGCCGCATGCAAGAGATGATTG...AAGGTTCTTAGCCCTGTGGAAGGAAGGGCACCCATCCACAATGAAGCACCTGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000027495.15 ENSMUST00000168776.8 ENSMUST00000172165.8 ENSMUST00000179353.8 |
||
| CDS-3UTR GCA 90 bp | AGCCTGGGGTTGGATCCATGCCAGCCAAGGACTATGATTTCCACTGCTATGACCCTTGCAATCATCTCTTaGATGCGGCGGAGCTCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: SLGLDPCQPRTMISTAMTLAIIS*MRRSSA Trigger: GGCTGAGCTCCGCCGCATGCAAGAGATGATTGCAAG...GGTCATAGCAGTGGAAATCATAGTCCTTGGCTGGCATGGATCCAACCCCAGGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000027495.15 ENSMUST00000168776.8 ENSMUST00000172165.8 ENSMUST00000179353.8 |
||
| CDS-3UTR CCA 90 bp | AGAGCACCACCCAATCACAAGCCTGGGGTTGGATCCATGCCAGCCAAGGACTATGCCAACCACAGAGAATaGGATACTGGCCTTGAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: RAPPNHKPGVGSMPAKDYANHRE*DTGLEE Trigger: CTCCTCAAGGCCAGTATCCCATTCTCTGTGGTTGGC...ATAGTCCTTGGCTGGCATGGATCCAACCCCAGGCTTGTGATTGGGTGGTGCTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000027495.15 ENSMUST00000168776.8 ENSMUST00000172165.8 ENSMUST00000179353.8 |
||
| 3UTR CAA 72 bp | GAAAACCTGGCAGGCATCTGGGCTTCAAGTGGCCTTTaGTTCAAGAGCACCACCCAATCACAAGCCTGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: ENLAGIWASSGL*FKSTTQSQAWG Trigger: ACCCCAGGCTTGTGATTGGGTGGTGCTCTTGAACAAAAGGCCACTTGAAGCCCAGATGCCTGCCAGGTTTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000027495.15 ENSMUST00000168776.8 ENSMUST00000172165.8 ENSMUST00000179353.8 |
||
| CDS-3UTR GCA 90 bp | CCTGGCAGGCATCTGGGCTTCAAGTGGCCTTTTGTTCAAGAGCACCACCCAATCCCCTGCATCTGCATCTaGATCTGCGCTTGCATTCTT | + |
|
Preference number: 4 (lower is better) Translates to: PGRHLGFKWPFVQEHHPIPCICI*ICACIL Trigger: AAGAATGCAAGCGCAGATGCAGATGCAGATGCAGGG...GATTGGGTGGTGCTCTTGAACAAAAGGCCACTTGAAGCCCAGATGCCTGCCAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000027495.15 ENSMUST00000168776.8 ENSMUST00000172165.8 ENSMUST00000179353.8 |
||
| CDS-3UTR CCA 90 bp | AGCCTGGGGTTGGATCCATGCCAGCCAAGGACTATGATTTCCACTGCTATGACCCTCTACAACACCCCATaGGTAGAGACGGCCTCTAAC | + |
|
Preference number: 4 (lower is better) Translates to: SLGLDPCQPRTMISTAMTLYNTP*VETASN Trigger: GTTAGAGGCCGTCTCTACCCATGGGGTGTTGTAGAG...GGTCATAGCAGTGGAAATCATAGTCCTTGGCTGGCATGGATCCAACCCCAGGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000027495.15 ENSMUST00000168776.8 ENSMUST00000172165.8 ENSMUST00000179353.8 |
||
| CDS-3UTR CCA 90 bp | CACAGGTGCTTCATTGTGGATGGGTGCCCTTCCTTCCACAGGGCTAAGAACCTTCTCTACAACACCCCATaGGTAGAGACGGCCTCTAAC | + |
|
Preference number: 4 (lower is better) Translates to: HRCFIVDGCPSFHRAKNLLYNTP*VETASN Trigger: GTTAGAGGCCGTCTCTACCCATGGGGTGTTGTAGAG...AAGGTTCTTAGCCCTGTGGAAGGAAGGGCACCCATCCACAATGAAGCACCTGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000027495.15 ENSMUST00000168776.8 ENSMUST00000172165.8 ENSMUST00000179353.8 |
||
| CDS-3UTR TCA 90 bp | AGCCTGGGGTTGGATCCATGCCAGCCAAGGACTATGATTTCCACTGCTATGACCCTGTTATCAATGATGTaGCGCCTGTTCAGTCCACTC | + |
|
Preference number: 4 (lower is better) Translates to: SLGLDPCQPRTMISTAMTLLSMM*RLFSPL Trigger: GAGTGGACTGAACAGGCGTCACATCATTGATAACAG...GGTCATAGCAGTGGAAATCATAGTCCTTGGCTGGCATGGATCCAACCCCAGGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000027495.15 ENSMUST00000168776.8 ENSMUST00000172165.8 ENSMUST00000179353.8 |
||
| CDS-3UTR GCA 90 bp | TTGGATCCATGCCAGCCAAGGACTATGATTTCCACTGCTATGACCTTTTGCACCCTTGCAATCATCTCTTaGATGCGGCGGAGCTCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: LDPCQPRTMISTAMTFCTLAIIS*MRRSSA Trigger: GGCTGAGCTCCGCCGCATGCAAGAGATGATTGCAAG...GGTGCAAAAGGTCATAGCAGTGGAAATCATAGTCCTTGGCTGGCATGGATCCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000027495.15 ENSMUST00000168776.8 ENSMUST00000172165.8 ENSMUST00000179353.8 |
||
| CDS-3UTR CCA 90 bp | AGCCTGGGGTTGGATCCATGCCAGCCAAGGACTATGATTTCCACTGCTATGACCTTGGCTTCAATCAACTaGTTGGAGCCAACCACAGAG | + |
|
Preference number: 4 (lower is better) Translates to: SLGLDPCQPRTMISTAMTLASIN*LEPTTE Trigger: CTCTGTGGTTGGCTCCAACCAGTTGATTGAAGCCAA...GGTCATAGCAGTGGAAATCATAGTCCTTGGCTGGCATGGATCCAACCCCAGGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000027495.15 ENSMUST00000168776.8 ENSMUST00000172165.8 ENSMUST00000179353.8 |
||
| CDS-3UTR GCA 90 bp | AGCCTGGGGTTGGATCCATGCCAGCCAAGGACTATGATTTCCACTGCTATGACCATCTGCATCTGCATCTaGGCTTGCATTCTTGCAATC | + |
|
Preference number: 4 (lower is better) Translates to: SLGLDPCQPRTMISTAMTICICI*ACILAI Trigger: GATTGCAAGAATGCAAGCGCAGATGCAGATGCAGAT...GGTCATAGCAGTGGAAATCATAGTCCTTGGCTGGCATGGATCCAACCCCAGGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000027495.15 ENSMUST00000168776.8 ENSMUST00000172165.8 ENSMUST00000179353.8 |
||
| CDS-3UTR CCA 90 bp | AGCCTGGGGTTGGATCCATGCCAGCCAAGGACTATGATTTCCACTGCTATGACCCTTCAATCAACTGGTTaGAGCCAACCACAGAGAATG | + |
|
Preference number: 4 (lower is better) Translates to: SLGLDPCQPRTMISTAMTLQSTG*SQPQRM Trigger: CATTCTCTGTGGTTGGCTCCAACCAGTTGATTGAAG...GGTCATAGCAGTGGAAATCATAGTCCTTGGCTGGCATGGATCCAACCCCAGGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000027495.15 ENSMUST00000168776.8 ENSMUST00000172165.8 ENSMUST00000179353.8 |
||
| CDS-3UTR CCA 90 bp | AGAGCACCACCCAATCACAAGCCTGGGGTTGGATCCATGCCAGCCAAGGACTATAAAGTCATTGTGTTCTaGGTTCTCCACCTCTACAAC | + |
|
Preference number: 4 (lower is better) Translates to: RAPPNHKPGVGSMPAKDYKVIVF*VLHLYN Trigger: GTTGTAGAGGTGGAGAACCCAGAACACAATGACTTT...ATAGTCCTTGGCTGGCATGGATCCAACCCCAGGCTTGTGATTGGGTGGTGCTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000027495.15 ENSMUST00000168776.8 ENSMUST00000172165.8 ENSMUST00000179353.8 |
||
| 3UTR CAA 72 bp | AACAACCAACTGAAATCCTCAGACACAGGTGCTTCATaGTGGATGGGTGCCCTTCCTTCCACAGGGCTAAGA | + |
|
Preference number: 4 (lower is better) Translates to: NNQLKSSDTGAS*WMGALPSTGLR Trigger: TCTTAGCCCTGTGGAAGGAAGGGCACCCATCCACAATGAAGCACCTGTGTCTGAGGATTTCAGTTGGTTGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000027495.15 ENSMUST00000168776.8 ENSMUST00000172165.8 ENSMUST00000179353.8 |
||
| CDS-3UTR TCA 90 bp | CCTGGCAGGCATCTGGGCTTCAAGTGGCCTTTTGTTCAAGAGCACCACCCAATCTCCATGTCCAAAAGGTaGAATGAAGTAGAAGCAACA | + |
|
Preference number: 4 (lower is better) Translates to: PGRHLGFKWPFVQEHHPISMSKR*NEVEAT Trigger: TGTTGCTTCTACTTCATTTCACCTTTTGGACATGGA...GATTGGGTGGTGCTCTTGAACAAAAGGCCACTTGAAGCCCAGATGCCTGCCAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000027495.15 ENSMUST00000168776.8 ENSMUST00000172165.8 ENSMUST00000179353.8 |
||
| CDS-3UTR GCA 90 bp | TTGGATCCATGCCAGCCAAGGACTATGATTTCCACTGCTATGACCTTTTGCACCACTTCCTGTAGGTCCTaGATGTGGGTGATGAGCATC | + |
|
Preference number: 4 (lower is better) Translates to: LDPCQPRTMISTAMTFCTTSCRS*MWVMSI Trigger: GATGCTCATCACCCACATGCAGGACCTACAGGAAGT...GGTGCAAAAGGTCATAGCAGTGGAAATCATAGTCCTTGGCTGGCATGGATCCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000027495.15 ENSMUST00000168776.8 ENSMUST00000172165.8 ENSMUST00000179353.8 |
||
| CDS-3UTR GCA 90 bp | AACGTAAATCCCTGCCTCATCATCAATCAAGTCCTTCCTCCTGCAGCAAATGAACAATCATCTCTTGCATaGGGCGGAGCTCAGCCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: NVNPCLIINQVLPPAANEQSSLA*GGAQPP Trigger: AGGAGGCTGAGCTCCGCCGCATGCAAGAGATGATTG...TTCATTTGCTGCAGGAGGAAGGACTTGATTGATGATGAGGCAGGGATTTACGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000027495.15 ENSMUST00000168776.8 ENSMUST00000172165.8 ENSMUST00000179353.8 |
||
| CDS-3UTR GCA 90 bp | CTGCTTTTCAATGAAAGGTTACTAACACAGCTAACAGCAGCGGACTTGAGAGAGCTTGCAATCATCTCTTaGATGCGGCGGAGCTCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: LLFNERLLTQLTAADLRELAIIS*MRRSSA Trigger: GGCTGAGCTCCGCCGCATGCAAGAGATGATTGCAAG...CTCTCTCAAGTCCGCTGCTGTTAGCTGTGTTAGTAACCTTTCATTGAAAAGCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000157021.2 |
||
| CDS-3UTR GCA 90 bp | AACGTAAATCCCTGCCTCATCATCAATCAAGTCCTTCCTCCTGCAGCAAATGAACTTGCAATCATCTCTTaGATGCGGCGGAGCTCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: NVNPCLIINQVLPPAANELAIIS*MRRSSA Trigger: GGCTGAGCTCCGCCGCATGCAAGAGATGATTGCAAG...TTCATTTGCTGCAGGAGGAAGGACTTGATTGATGATGAGGCAGGGATTTACGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000027495.15 ENSMUST00000168776.8 ENSMUST00000172165.8 ENSMUST00000179353.8 |
||
| CDS-3UTR CCA 90 bp | CTGCCTGACATTAGAAGACAGGGTAGAAGAGGGAAGTGCCAGAATATAAACCAGGCCAACCACAGAGAATaGGATACTGGCCTTGAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: LPDIRRQGRRGKCQNINQANHRE*DTGLEE Trigger: CTCCTCAAGGCCAGTATCCCATTCTCTGTGGTTGGC...CTGGTTTATATTCTGGCACTTCCCTCTTCTACCCTGTCTTCTAATGTCAGGCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000027495.15 ENSMUST00000168776.8 ENSMUST00000172165.8 ENSMUST00000179353.8 |
||
| CDS-3UTR TCA 90 bp | CCTGGCAGGCATCTGGGCTTCAAGTGGCCTTTTGTTCAAGAGCACCACCCAATCGGAATAAGCTGTTTATaGGAGTTGATTTTCCTAGAC | + |
|
Preference number: 4 (lower is better) Translates to: PGRHLGFKWPFVQEHHPIGISCL*ELIFLD Trigger: GTCTAGGAAAATCAACTCTCATAAACAGCTTATTCC...GATTGGGTGGTGCTCTTGAACAAAAGGCCACTTGAAGCCCAGATGCCTGCCAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000027495.15 ENSMUST00000168776.8 ENSMUST00000172165.8 ENSMUST00000179353.8 |
||
| CDS-3UTR TCA 90 bp | TTGGATCCATGCCAGCCAAGGACTATGATTTCCACTGCTATGACCTTTTGCACCCTGTTATCAATGATGTaGCGCCTGTTCAGTCCACTC | + |
|
Preference number: 4 (lower is better) Translates to: LDPCQPRTMISTAMTFCTLLSMM*RLFSPL Trigger: GAGTGGACTGAACAGGCGTCACATCATTGATAACAG...GGTGCAAAAGGTCATAGCAGTGGAAATCATAGTCCTTGGCTGGCATGGATCCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000027495.15 ENSMUST00000168776.8 ENSMUST00000172165.8 ENSMUST00000179353.8 |
||
| CDS-3UTR GCA 90 bp | CTGCCTGACATTAGAAGACAGGGTAGAAGAGGGAAGTGCCAGAATATAAACCAGCATTCTCTACTTTCCTaGCGCCTCTCTTCAGCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: LPDIRRQGRRGKCQNINQHSLLS*RLSSAS Trigger: AGAGGCTGAAGAGAGGCGGCAGGAAAGTAGAGAATG...CTGGTTTATATTCTGGCACTTCCCTCTTCTACCCTGTCTTCTAATGTCAGGCAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000027495.15 ENSMUST00000168776.8 ENSMUST00000172165.8 ENSMUST00000179353.8 |
||
| CDS-3UTR CCA 90 bp | CCACCAAGTATGCACAACCACTTCTGTCACAGGTACATCAATGTCCACCACACATTGGCTTCAATCAACTaGTTGGAGCCAACCACAGAG | + |
|
Preference number: 4 (lower is better) Translates to: PPSMHNHFCHRYINVHHTLASIN*LEPTTE Trigger: CTCTGTGGTTGGCTCCAACCAGTTGATTGAAGCCAA...TGTGTGGTGGACATTGATGTACCTGTGACAGAAGTGGTTGTGCATACTTGGTGG 48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000027495.15 ENSMUST00000168776.8 ENSMUST00000172165.8 ENSMUST00000179353.8 |
||
| CDS-3UTR TCA 90 bp | AGCCTGGGGTTGGATCCATGCCAGCCAAGGACTATGATTTCCACTGCTATGACCGTCCAAAAGGTGAAATaGAGTAGAAGCAACAATGTA | + |
|
Preference number: 4 (lower is better) Translates to: SLGLDPCQPRTMISTAMTVQKVK*SRSNNV Trigger: TACATTGTTGCTTCTACTTCATTTCACCTTTTGGAC...GGTCATAGCAGTGGAAATCATAGTCCTTGGCTGGCATGGATCCAACCCCAGGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000027495.15 ENSMUST00000168776.8 ENSMUST00000172165.8 ENSMUST00000179353.8 |
||
| CDS-3UTR GCA 90 bp | AACGTAAATCCCTGCCTCATCATCAATCAAGTCCTTCCTCCTGCAGCAAATGAACATTCTCTACTTTCCTaGCGCCTCTCTTCAGCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: NVNPCLIINQVLPPAANEHSLLS*RLSSAS Trigger: AGAGGCTGAAGAGAGGCGGCAGGAAAGTAGAGAATG...TTCATTTGCTGCAGGAGGAAGGACTTGATTGATGATGAGGCAGGGATTTACGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000027495.15 ENSMUST00000168776.8 ENSMUST00000172165.8 ENSMUST00000179353.8 |
||
| CDS-3UTR GCA 90 bp | ATTTCTTTTGGAGTATCTGGGTTATCTCTGATGAAAATATACGCAGCACGCCTGCAATCATCTCTTGCATaGGGCGGAGCTCAGCCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: ISFGVSGLSLMKIYAARLQSSLA*GGAQPP Trigger: AGGAGGCTGAGCTCCGCCGCATGCAAGAGATGATTG...CAGGCGTGCTGCGTATATTTTCATCAGAGATAACCCAGATACTCCAAAAGAAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027495.15 |
||
| CDS-3UTR GCA 90 bp | TTGGATCCATGCCAGCCAAGGACTATGATTTCCACTGCTATGACCTTTTGCACCATCTGCATCTGCATCTaGGCTTGCATTCTTGCAATC | + |
|
Preference number: 4 (lower is better) Translates to: LDPCQPRTMISTAMTFCTICICI*ACILAI Trigger: GATTGCAAGAATGCAAGCGCAGATGCAGATGCAGAT...GGTGCAAAAGGTCATAGCAGTGGAAATCATAGTCCTTGGCTGGCATGGATCCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000027495.15 ENSMUST00000168776.8 ENSMUST00000172165.8 ENSMUST00000179353.8 |
||
| CDS-3UTR GCA 90 bp | AACGTAAATCCCTGCCTCATCATCAATCAAGTCCTTCCTCCTGCAGCAAATGAACCCTGCATCTGCATCTaGATCTGCGCTTGCATTCTT | + |
|
Preference number: 4 (lower is better) Translates to: NVNPCLIINQVLPPAANEPCICI*ICACIL Trigger: AAGAATGCAAGCGCAGATGCAGATGCAGATGCAGGG...TTCATTTGCTGCAGGAGGAAGGACTTGATTGATGATGAGGCAGGGATTTACGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000027495.15 ENSMUST00000168776.8 ENSMUST00000172165.8 ENSMUST00000179353.8 |
||
| CDS-3UTR GCA 90 bp | CTGCTTTTCAATGAAAGGTTACTAACACAGCTAACAGCAGCGGACTTGAGAGAGCCCTGCATCTGCATCTaGATCTGCGCTTGCATTCTT | + |
|
Preference number: 4 (lower is better) Translates to: LLFNERLLTQLTAADLREPCICI*ICACIL Trigger: AAGAATGCAAGCGCAGATGCAGATGCAGATGCAGGG...CTCTCTCAAGTCCGCTGCTGTTAGCTGTGTTAGTAACCTTTCATTGAAAAGCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000157021.2 |
||
| CDS-3UTR CCA 90 bp | AGCCTGGGGTTGGATCCATGCCAGCCAAGGACTATGATTTCCACTGCTATGACCTTCGGTGAACTTGATTaGGAAGATTTGCAAATCCAA | + |
|
Preference number: 4 (lower is better) Translates to: SLGLDPCQPRTMISTAMTFGELD*EDLQIQ Trigger: TTGGATTTGCAAATCTTCCCAATCAAGTTCACCGAA...GGTCATAGCAGTGGAAATCATAGTCCTTGGCTGGCATGGATCCAACCCCAGGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027495.15 ENSMUST00000168776.8 ENSMUST00000179353.8 |
||
| CDS-3UTR CCA 90 bp | TTGGATCCATGCCAGCCAAGGACTATGATTTCCACTGCTATGACCTTTTGCACCCTTCAATCAACTGGTTaGAGCCAACCACAGAGAATG | + |
|
Preference number: 4 (lower is better) Translates to: LDPCQPRTMISTAMTFCTLQSTG*SQPQRM Trigger: CATTCTCTGTGGTTGGCTCCAACCAGTTGATTGAAG...GGTGCAAAAGGTCATAGCAGTGGAAATCATAGTCCTTGGCTGGCATGGATCCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000027495.15 ENSMUST00000168776.8 ENSMUST00000172165.8 ENSMUST00000179353.8 |
||
| CDS-3UTR GCA 90 bp | GCCTTTCGTTCATGGTGTGAAGACATTTATACTACACACACTGAAGAAAATGACCTTGCAATCATCTCTTaGATGCGGCGGAGCTCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: AFRSWCEDIYTTHTEENDLAIIS*MRRSSA Trigger: GGCTGAGCTCCGCCGCATGCAAGAGATGATTGCAAG...GTCATTTTCTTCAGTGTGTGTAGTATAAATGTCTTCACACCATGAACGAAAGGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000027495.15 ENSMUST00000168776.8 ENSMUST00000172165.8 ENSMUST00000179353.8 |
||
| CDS-3UTR CCA 90 bp | ATTTCTTTTGGAGTATCTGGGTTATCTCTGATGAAAATATACGCAGCACGCCTGCTCTACAACACCCCATaGGTAGAGACGGCCTCTAAC | + |
|
Preference number: 4 (lower is better) Translates to: ISFGVSGLSLMKIYAARLLYNTP*VETASN Trigger: GTTAGAGGCCGTCTCTACCCATGGGGTGTTGTAGAG...CAGGCGTGCTGCGTATATTTTCATCAGAGATAACCCAGATACTCCAAAAGAAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000027495.15 |
||
| CDS-3UTR CCA 90 bp | TTGGATCCATGCCAGCCAAGGACTATGATTTCCACTGCTATGACCTTTTGCACCAAAGTCATTGTGTTCTaGGTTCTCCACCTCTACAAC | + |
|
Preference number: 4 (lower is better) Translates to: LDPCQPRTMISTAMTFCTKVIVF*VLHLYN Trigger: GTTGTAGAGGTGGAGAACCCAGAACACAATGACTTT...GGTGCAAAAGGTCATAGCAGTGGAAATCATAGTCCTTGGCTGGCATGGATCCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000027495.15 ENSMUST00000168776.8 ENSMUST00000172165.8 ENSMUST00000179353.8 |
||
| CDS-3UTR CCA 90 bp | CCACCAAGTATGCACAACCACTTCTGTCACAGGTACATCAATGTCCACCACACAAAAGTCATTGTGTTCTaGGTTCTCCACCTCTACAAC | + |
|
Preference number: 4 (lower is better) Translates to: PPSMHNHFCHRYINVHHTKVIVF*VLHLYN Trigger: GTTGTAGAGGTGGAGAACCCAGAACACAATGACTTT...TGTGTGGTGGACATTGATGTACCTGTGACAGAAGTGGTTGTGCATACTTGGTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000027495.15 ENSMUST00000168776.8 ENSMUST00000172165.8 ENSMUST00000179353.8 |
||
| CDS-3UTR GCA 90 bp | CTGCTTTTCAATGAAAGGTTACTAACACAGCTAACAGCAGCGGACTTGAGAGAGATCTGCATCTGCATCTaGGCTTGCATTCTTGCAATC | + |
|
Preference number: 4 (lower is better) Translates to: LLFNERLLTQLTAADLREICICI*ACILAI Trigger: GATTGCAAGAATGCAAGCGCAGATGCAGATGCAGAT...CTCTCTCAAGTCCGCTGCTGTTAGCTGTGTTAGTAACCTTTCATTGAAAAGCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000157021.2 |
||
| CDS-3UTR CCA 90 bp | GCCTTTCGTTCATGGTGTGAAGACATTTATACTACACACACTGAAGAAAATGACCTCTACAACACCCCATaGGTAGAGACGGCCTCTAAC | + |
|
Preference number: 4 (lower is better) Translates to: AFRSWCEDIYTTHTEENDLYNTP*VETASN Trigger: GTTAGAGGCCGTCTCTACCCATGGGGTGTTGTAGAG...GTCATTTTCTTCAGTGTGTGTAGTATAAATGTCTTCACACCATGAACGAAAGGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000027495.15 ENSMUST00000168776.8 ENSMUST00000172165.8 ENSMUST00000179353.8 |
||
| CDS-3UTR GCA 90 bp | CCTTATAAAGAGTCTTGTTACAATATGAAGCTGGAGCTCATAGCTGCTTTGGTTACTTCCTGTAGGTCCTaGATGTGGGTGATGAGCATC | + |
|
Preference number: 4 (lower is better) Translates to: PYKESCYNMKLELIAALVTSCRS*MWVMSI Trigger: GATGCTCATCACCCACATGCAGGACCTACAGGAAGT...AACCAAAGCAGCTATGAGCTCCAGCTTCATATTGTAACAAGACTCTTTATAAGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000027495.15 ENSMUST00000168776.8 ENSMUST00000172165.8 ENSMUST00000179353.8 |
||
| CDS-3UTR GCA 90 bp | CCTTATAAAGAGTCTTGTTACAATATGAAGCTGGAGCTCATAGCTGCTTTGGTTCATTCTCTACTTTCCTaGCGCCTCTCTTCAGCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: PYKESCYNMKLELIAALVHSLLS*RLSSAS Trigger: AGAGGCTGAAGAGAGGCGGCAGGAAAGTAGAGAATG...AACCAAAGCAGCTATGAGCTCCAGCTTCATATTGTAACAAGACTCTTTATAAGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000027495.15 ENSMUST00000168776.8 ENSMUST00000172165.8 ENSMUST00000179353.8 |
||
| CDS-3UTR CCA 90 bp | TCCAACAAACTTAATGTCAAAATAAGCCAAACAAAGGACTGCATGGGTACTCTAGCCAACCACAGAGAATaGGATACTGGCCTTGAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: SNKLNVKISQTKDCMGTLANHRE*DTGLEE Trigger: CTCCTCAAGGCCAGTATCCCATTCTCTGTGGTTGGC...TAGAGTACCCATGCAGTCCTTTGTTTGGCTTATTTTGACATTAAGTTTGTTGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000027495.15 ENSMUST00000168776.8 ENSMUST00000172165.8 ENSMUST00000179353.8 |
||
| CDS-3UTR TCA 90 bp | CCTTATAAAGAGTCTTGTTACAATATGAAGCTGGAGCTCATAGCTGCTTTGGTTCTGTTATCAATGATGTaGCGCCTGTTCAGTCCACTC | + |
|
Preference number: 4 (lower is better) Translates to: PYKESCYNMKLELIAALVLLSMM*RLFSPL Trigger: GAGTGGACTGAACAGGCGTCACATCATTGATAACAG...AACCAAAGCAGCTATGAGCTCCAGCTTCATATTGTAACAAGACTCTTTATAAGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000027495.15 ENSMUST00000168776.8 ENSMUST00000172165.8 ENSMUST00000179353.8 |
||
| CDS-3UTR TCA 90 bp | CTGCCTGACATTAGAAGACAGGGTAGAAGAGGGAAGTGCCAGAATATAAACCAGGTCCAAAAGGTGAAATaGAGTAGAAGCAACAATGTA | + |
|
Preference number: 4 (lower is better) Translates to: LPDIRRQGRRGKCQNINQVQKVK*SRSNNV Trigger: TACATTGTTGCTTCTACTTCATTTCACCTTTTGGAC...CTGGTTTATATTCTGGCACTTCCCTCTTCTACCCTGTCTTCTAATGTCAGGCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000027495.15 ENSMUST00000168776.8 ENSMUST00000172165.8 ENSMUST00000179353.8 |
||
| CDS-3UTR TCA 90 bp | AACGTAAATCCCTGCCTCATCATCAATCAAGTCCTTCCTCCTGCAGCAAATGAATCCATGTCCAAAAGGTaGAATGAAGTAGAAGCAACA | + |
|
Preference number: 4 (lower is better) Translates to: NVNPCLIINQVLPPAANESMSKR*NEVEAT Trigger: TGTTGCTTCTACTTCATTTCACCTTTTGGACATGGA...TTCATTTGCTGCAGGAGGAAGGACTTGATTGATGATGAGGCAGGGATTTACGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000027495.15 ENSMUST00000168776.8 ENSMUST00000172165.8 ENSMUST00000179353.8 |
||
| CDS-3UTR GCA 90 bp | TCCAACAAACTTAATGTCAAAATAAGCCAAACAAAGGACTGCATGGGTACTCTACCCTGCATCTGCATCTaGATCTGCGCTTGCATTCTT | + |
|
Preference number: 4 (lower is better) Translates to: SNKLNVKISQTKDCMGTLPCICI*ICACIL Trigger: AAGAATGCAAGCGCAGATGCAGATGCAGATGCAGGG...TAGAGTACCCATGCAGTCCTTTGTTTGGCTTATTTTGACATTAAGTTTGTTGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000027495.15 ENSMUST00000168776.8 ENSMUST00000172165.8 ENSMUST00000179353.8 |
||
| CDS-3UTR CCA 90 bp | CTGCCTGACATTAGAAGACAGGGTAGAAGAGGGAAGTGCCAGAATATAAACCAGTTCGGTGAACTTGATTaGGAAGATTTGCAAATCCAA | + |
|
Preference number: 4 (lower is better) Translates to: LPDIRRQGRRGKCQNINQFGELD*EDLQIQ Trigger: TTGGATTTGCAAATCTTCCCAATCAAGTTCACCGAA...CTGGTTTATATTCTGGCACTTCCCTCTTCTACCCTGTCTTCTAATGTCAGGCAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027495.15 ENSMUST00000168776.8 ENSMUST00000179353.8 |
||
| CDS-3UTR CCA 90 bp | ACAAGTACAAGTTACTTCTTAGTGAAAGAGCAAGTATCTGTTAGCAAAAGCAGTGCCAACCACAGAGAATaGGATACTGGCCTTGAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: TSTSYFLVKEQVSVSKSSANHRE*DTGLEE Trigger: CTCCTCAAGGCCAGTATCCCATTCTCTGTGGTTGGC...ACTGCTTTTGCTAACAGATACTTGCTCTTTCACTAAGAAGTAACTTGTACTTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000027495.15 ENSMUST00000168776.8 ENSMUST00000172165.8 ENSMUST00000179353.8 |
||
| 3UTR CAA 72 bp | CCAGAGGCAAAGAGAGAGATAGTAGATTTCTTTGAGTaGGAGACCAACCTGATTTACATAAAGAGTTCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: PEAKREIVDFFE*ETNLIYIKSSR Trigger: CCTGGAACTCTTTATGTAAATCAGGTTGGTCTCCAACTCAAAGAAATCTACTATCTCTCTCTTTGCCTCTGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027495.15 |
||
| CDS-3UTR GCA 90 bp | ACAAGTACAAGTTACTTCTTAGTGAAAGAGCAAGTATCTGTTAGCAAAAGCAGTCATTCTCTACTTTCCTaGCGCCTCTCTTCAGCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: TSTSYFLVKEQVSVSKSSHSLLS*RLSSAS Trigger: AGAGGCTGAAGAGAGGCGGCAGGAAAGTAGAGAATG...ACTGCTTTTGCTAACAGATACTTGCTCTTTCACTAAGAAGTAACTTGTACTTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000027495.15 ENSMUST00000168776.8 ENSMUST00000172165.8 ENSMUST00000179353.8 |
||
| CDS-3UTR GCA 90 bp | CCTTATAAAGAGTCTTGTTACAATATGAAGCTGGAGCTCATAGCTGCTTTGGTTATCTGCATCTGCATCTaGGCTTGCATTCTTGCAATC | + |
|
Preference number: 4 (lower is better) Translates to: PYKESCYNMKLELIAALVICICI*ACILAI Trigger: GATTGCAAGAATGCAAGCGCAGATGCAGATGCAGAT...AACCAAAGCAGCTATGAGCTCCAGCTTCATATTGTAACAAGACTCTTTATAAGG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000027495.15 ENSMUST00000168776.8 ENSMUST00000172165.8 ENSMUST00000179353.8 |
||
| CDS-3UTR GCA 90 bp | AAAGAGTACTTGTCAGTGATTAGTCAGGCCAGCTATATCATAGAAATTCACTATCCCTGCATCTGCATCTaGATCTGCGCTTGCATTCTT | + |
|
Preference number: 4 (lower is better) Translates to: KEYLSVISQASYIIEIHYPCICI*ICACIL Trigger: AAGAATGCAAGCGCAGATGCAGATGCAGATGCAGGG...ATAGTGAATTTCTATGATATAGCTGGCCTGACTAATCACTGACAAGTACTCTTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000027495.15 ENSMUST00000168776.8 ENSMUST00000172165.8 ENSMUST00000179353.8 |
||
| CDS-3UTR CCA 90 bp | GCCTTTCGTTCATGGTGTGAAGACATTTATACTACACACACTGAAGAAAATGACCTTCAATCAACTGGTTaGAGCCAACCACAGAGAATG | + |
|
Preference number: 4 (lower is better) Translates to: AFRSWCEDIYTTHTEENDLQSTG*SQPQRM Trigger: CATTCTCTGTGGTTGGCTCCAACCAGTTGATTGAAG...GTCATTTTCTTCAGTGTGTGTAGTATAAATGTCTTCACACCATGAACGAAAGGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000027495.15 ENSMUST00000168776.8 ENSMUST00000172165.8 ENSMUST00000179353.8 |
||
| CDS-3UTR CCA 90 bp | TCCAACAAACTTAATGTCAAAATAAGCCAAACAAAGGACTGCATGGGTACTCTATTGGCTTCAATCAACTaGTTGGAGCCAACCACAGAG | + |
|
Preference number: 4 (lower is better) Translates to: SNKLNVKISQTKDCMGTLLASIN*LEPTTE Trigger: CTCTGTGGTTGGCTCCAACCAGTTGATTGAAGCCAA...TAGAGTACCCATGCAGTCCTTTGTTTGGCTTATTTTGACATTAAGTTTGTTGGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000027495.15 ENSMUST00000168776.8 ENSMUST00000172165.8 ENSMUST00000179353.8 |
||
| CDS-3UTR TCA 90 bp | ACAAGTACAAGTTACTTCTTAGTGAAAGAGCAAGTATCTGTTAGCAAAAGCAGTCTGTTATCAATGATGTaGCGCCTGTTCAGTCCACTC | + |
|
Preference number: 4 (lower is better) Translates to: TSTSYFLVKEQVSVSKSSLLSMM*RLFSPL Trigger: GAGTGGACTGAACAGGCGTCACATCATTGATAACAG...ACTGCTTTTGCTAACAGATACTTGCTCTTTCACTAAGAAGTAACTTGTACTTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000027495.15 ENSMUST00000168776.8 ENSMUST00000172165.8 ENSMUST00000179353.8 |
||
| CDS-3UTR CCA 90 bp | GCCTTTCGTTCATGGTGTGAAGACATTTATACTACACACACTGAAGAAAATGACAAAGTCATTGTGTTCTaGGTTCTCCACCTCTACAAC | + |
|
Preference number: 4 (lower is better) Translates to: AFRSWCEDIYTTHTEENDKVIVF*VLHLYN Trigger: GTTGTAGAGGTGGAGAACCCAGAACACAATGACTTT...GTCATTTTCTTCAGTGTGTGTAGTATAAATGTCTTCACACCATGAACGAAAGGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000027495.15 ENSMUST00000168776.8 ENSMUST00000172165.8 ENSMUST00000179353.8 |
||
| 3UTR CAA 72 bp | CCAGCCAAGGACTATGATTTCCACTGCTATGACCTTTaGCACCTAGTTATAGAAAGTACATTAAAGTGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: PAKDYDFHCYDL*HLVIESTLKCS Trigger: ACTGCACTTTAATGTACTTTCTATAACTAGGTGCAAAAGGTCATAGCAGTGGAAATCATAGTCCTTGGCTGG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000027495.15 ENSMUST00000168776.8 ENSMUST00000172165.8 ENSMUST00000179353.8 |
||
| CDS-3UTR TCA 90 bp | ATTTCTTTTGGAGTATCTGGGTTATCTCTGATGAAAATATACGCAGCACGCCTGTCTGGATTTATAAACTaGGTTGGTTGTTGCTTAGAC | + |
|
Preference number: 4 (lower is better) Translates to: ISFGVSGLSLMKIYAARLSGFIN*VGCCLD Trigger: GTCTAAGCAACAACCAACTCAGTTTATAAATCCAGA...CAGGCGTGCTGCGTATATTTTCATCAGAGATAACCCAGATACTCCAAAAGAAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027495.15 |
||
| CDS-3UTR TCA 90 bp | CCTTATAAAGAGTCTTGTTACAATATGAAGCTGGAGCTCATAGCTGCTTTGGTTTCCATGTCCAAAAGGTaGAATGAAGTAGAAGCAACA | + |
|
Preference number: 4 (lower is better) Translates to: PYKESCYNMKLELIAALVSMSKR*NEVEAT Trigger: TGTTGCTTCTACTTCATTTCACCTTTTGGACATGGA...AACCAAAGCAGCTATGAGCTCCAGCTTCATATTGTAACAAGACTCTTTATAAGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000027495.15 ENSMUST00000168776.8 ENSMUST00000172165.8 ENSMUST00000179353.8 |
||
| CDS-3UTR GCA 90 bp | ACAAGTACAAGTTACTTCTTAGTGAAAGAGCAAGTATCTGTTAGCAAAAGCAGTATCTGCATCTGCATCTaGGCTTGCATTCTTGCAATC | + |
|
Preference number: 4 (lower is better) Translates to: TSTSYFLVKEQVSVSKSSICICI*ACILAI Trigger: GATTGCAAGAATGCAAGCGCAGATGCAGATGCAGAT...ACTGCTTTTGCTAACAGATACTTGCTCTTTCACTAAGAAGTAACTTGTACTTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000027495.15 ENSMUST00000168776.8 ENSMUST00000172165.8 ENSMUST00000179353.8 |
||
| CDS-3UTR CCA 90 bp | ATTTCTTTTGGAGTATCTGGGTTATCTCTGATGAAAATATACGCAGCACGCCTGATAGCCAGGAGTTTCTaGATTTATAAACTGAGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: ISFGVSGLSLMKIYAARLIARSF*IYKLSW Trigger: CCAACTCAGTTTATAAATCCAGAAACTCCTGGCTAT...CAGGCGTGCTGCGTATATTTTCATCAGAGATAACCCAGATACTCCAAAAGAAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027495.15 |
||
| CDS-3UTR TCA 90 bp | CCTTATAAAGAGTCTTGTTACAATATGAAGCTGGAGCTCATAGCTGCTTTGGTTGTCCAAAAGGTGAAATaGAGTAGAAGCAACAATGTA | + |
|
Preference number: 4 (lower is better) Translates to: PYKESCYNMKLELIAALVVQKVK*SRSNNV Trigger: TACATTGTTGCTTCTACTTCATTTCACCTTTTGGAC...AACCAAAGCAGCTATGAGCTCCAGCTTCATATTGTAACAAGACTCTTTATAAGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000027495.15 ENSMUST00000168776.8 ENSMUST00000172165.8 ENSMUST00000179353.8 |
||
| CDS-3UTR CCA 90 bp | GCCTTTCGTTCATGGTGTGAAGACATTTATACTACACACACTGAAGAAAATGACATAGCCAGGAGTTTCTaGATTTATAAACTGAGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: AFRSWCEDIYTTHTEENDIARSF*IYKLSW Trigger: CCAACTCAGTTTATAAATCCAGAAACTCCTGGCTAT...GTCATTTTCTTCAGTGTGTGTAGTATAAATGTCTTCACACCATGAACGAAAGGC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027495.15 ENSMUST00000168776.8 ENSMUST00000179353.8 |
||
| CDS-3UTR TCA 90 bp | TCCAACAAACTTAATGTCAAAATAAGCCAAACAAAGGACTGCATGGGTACTCTATCTGGATTTATAAACTaGGTTGGTTGTTGCTTAGAC | + |
|
Preference number: 4 (lower is better) Translates to: SNKLNVKISQTKDCMGTLSGFIN*VGCCLD Trigger: GTCTAAGCAACAACCAACTCAGTTTATAAATCCAGA...TAGAGTACCCATGCAGTCCTTTGTTTGGCTTATTTTGACATTAAGTTTGTTGGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027495.15 ENSMUST00000168776.8 ENSMUST00000179353.8 |
||
| CDS-3UTR TCA 90 bp | CATCTTATTAGTACTACTGAGTTTTGGACTGAATTAAACGTAAATCCCTGCCTCGGAATAAGCTGTTTATaGGAGTTGATTTTCCTAGAC | + |
|
Preference number: 4 (lower is better) Translates to: HLISTTEFWTELNVNPCLGISCL*ELIFLD Trigger: GTCTAGGAAAATCAACTCTCATAAACAGCTTATTCC...GAGGCAGGGATTTACGTTTAATTCAGTCCAAAACTCAGTAGTACTAATAAGATG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000027495.15 ENSMUST00000168776.8 ENSMUST00000172165.8 ENSMUST00000179353.8 |
||
| CDS-3UTR TCA 90 bp | ACAAGTACAAGTTACTTCTTAGTGAAAGAGCAAGTATCTGTTAGCAAAAGCAGTTCCATGTCCAAAAGGTaGAATGAAGTAGAAGCAACA | + |
|
Preference number: 4 (lower is better) Translates to: TSTSYFLVKEQVSVSKSSSMSKR*NEVEAT Trigger: TGTTGCTTCTACTTCATTTCACCTTTTGGACATGGA...ACTGCTTTTGCTAACAGATACTTGCTCTTTCACTAAGAAGTAACTTGTACTTGT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000027495.15 ENSMUST00000168776.8 ENSMUST00000172165.8 ENSMUST00000179353.8 |
||
| CDS-3UTR GCA 90 bp | CCTTATAAAGAGTCTTGTTACAATATGAAGCTGGAGCTCATAGCTGCTTTGGTTTCTTTCAATTTTCTCTaGAGCTCCAGGAATAATTCT | + |
|
Preference number: 4 (lower is better) Translates to: PYKESCYNMKLELIAALVSFNFL*SSRNNS Trigger: AGAATTATTCCTGGAGCTGCAGAGAAAATTGAAAGA...AACCAAAGCAGCTATGAGCTCCAGCTTCATATTGTAACAAGACTCTTTATAAGG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000027495.15 ENSMUST00000168776.8 ENSMUST00000172165.8 ENSMUST00000179353.8 |
||
| CDS-3UTR CCA 90 bp | TCCAACAAACTTAATGTCAAAATAAGCCAAACAAAGGACTGCATGGGTACTCTAATAGCCAGGAGTTTCTaGATTTATAAACTGAGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: SNKLNVKISQTKDCMGTLIARSF*IYKLSW Trigger: CCAACTCAGTTTATAAATCCAGAAACTCCTGGCTAT...TAGAGTACCCATGCAGTCCTTTGTTTGGCTTATTTTGACATTAAGTTTGTTGGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027495.15 ENSMUST00000168776.8 ENSMUST00000179353.8 |
||
| CDS-3UTR TCA 90 bp | ACAAGTACAAGTTACTTCTTAGTGAAAGAGCAAGTATCTGTTAGCAAAAGCAGTTCTGGATTTATAAACTaGGTTGGTTGTTGCTTAGAC | + |
|
Preference number: 4 (lower is better) Translates to: TSTSYFLVKEQVSVSKSSSGFIN*VGCCLD Trigger: GTCTAAGCAACAACCAACTCAGTTTATAAATCCAGA...ACTGCTTTTGCTAACAGATACTTGCTCTTTCACTAAGAAGTAACTTGTACTTGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027495.15 ENSMUST00000168776.8 ENSMUST00000179353.8 |
||
| CDS-3UTR GCA 90 bp | CATCTTATTAGTACTACTGAGTTTTGGACTGAATTAAACGTAAATCCCTGCCTCTCTTTCAATTTTCTCTaGAGCTCCAGGAATAATTCT | + |
|
Preference number: 4 (lower is better) Translates to: HLISTTEFWTELNVNPCLSFNFL*SSRNNS Trigger: AGAATTATTCCTGGAGCTGCAGAGAAAATTGAAAGA...GAGGCAGGGATTTACGTTTAATTCAGTCCAAAACTCAGTAGTACTAATAAGATG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000027495.15 ENSMUST00000168776.8 ENSMUST00000172165.8 ENSMUST00000179353.8 |
||
| CDS-3UTR GCA 90 bp | ACAAGTACAAGTTACTTCTTAGTGAAAGAGCAAGTATCTGTTAGCAAAAGCAGTTCTTTCAATTTTCTCTaGAGCTCCAGGAATAATTCT | + |
|
Preference number: 4 (lower is better) Translates to: TSTSYFLVKEQVSVSKSSSFNFL*SSRNNS Trigger: AGAATTATTCCTGGAGCTGCAGAGAAAATTGAAAGA...ACTGCTTTTGCTAACAGATACTTGCTCTTTCACTAAGAAGTAACTTGTACTTGT 34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000027495.15 ENSMUST00000168776.8 ENSMUST00000172165.8 ENSMUST00000179353.8 |
||
| CDS GCA 90 bp | TGCCCGAGAGCCCCGCTGTCACTGTCACCACCCTGCATCTGCATCTaGATCTGCGCTTGCATTCTTGCAATCATCTCTTGCATGCGGCGG | + |
|
Preference number: 5 (lower is better) Translates to: CPRAPLSLSPPCICI*ICACILAIISCMRR Trigger: CCGCCGCATGCAAGAGATGATTGCAAGAATGCAAGCGCAGATGCAGATGCAGATGCAGGGTGGTGACAGTGACAGCGGGGCTCTCGGGCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000027495.15 ENSMUST00000157021.2 ENSMUST00000168776.8 ENSMUST00000172165.8 ENSMUST00000179353.8 |
||
| CDS GCA 90 bp | CCGCTGTCACTGTCACCACCCTGCATCTGCATCTGCATCTGCGCTTaGATTCTTGCAATCATCTCTTGCATGCGGCGGAGCTCAGCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: PLSLSPPCICICICA*ILAIISCMRRSSAS Trigger: GGAGGCTGAGCTCCGCCGCATGCAAGAGATGATTGCAAGAATGCAAGCGCAGATGCAGATGCAGATGCAGGGTGGTGACAGTGACAGCGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000027495.15 ENSMUST00000157021.2 ENSMUST00000168776.8 ENSMUST00000172165.8 ENSMUST00000179353.8 |
||
| CDS GCA 90 bp | ACATGCTGCCCGAGAGCCCCGCTGTCACTGTCACCACCCTGCATCTaGATCTGCATCTGCGCTTGCATTCTTGCAATCATCTCTTGCATG | + |
|
Preference number: 5 (lower is better) Translates to: TCCPRAPLSLSPPCI*ICICACILAIISCM Trigger: CATGCAAGAGATGATTGCAAGAATGCAAGCGCAGATGCAGATGCAGATGCAGGGTGGTGACAGTGACAGCGGGGCTCTCGGGCAGCATGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000027495.15 ENSMUST00000157021.2 ENSMUST00000168776.8 ENSMUST00000172165.8 ENSMUST00000179353.8 |
||
| CDS-3UTR CAA 90 bp | CACAGGTGCTTCATTGTGGATGGGTGCCCTTCCTTCCACAGGGCTAAGAACCTTAATGGGATACTGGCCTaGAGGAGTCTAGTCTGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: HRCFIVDGCPSFHRAKNLNGILA*RSLVCS Trigger: GGAGCAGACTAGACTCCTCAAGGCCAGTATCCCATT...AAGGTTCTTAGCCCTGTGGAAGGAAGGGCACCCATCCACAATGAAGCACCTGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000027495.15 ENSMUST00000168776.8 ENSMUST00000172165.8 ENSMUST00000179353.8 |
||
| CDS-3UTR CAA 90 bp | CCTGGCAGGCATCTGGGCTTCAAGTGGCCTTTTGTTCAAGAGCACCACCCAATCGCTTCAATCAACTGGTaGGAGCCAACCACAGAGAAT | + |
|
Preference number: 5 (lower is better) Translates to: PGRHLGFKWPFVQEHHPIASINW*EPTTEN Trigger: ATTCTCTGTGGTTGGCTCCAACCAGTTGATTGAAGC...GATTGGGTGGTGCTCTTGAACAAAAGGCCACTTGAAGCCCAGATGCCTGCCAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000027495.15 ENSMUST00000168776.8 ENSMUST00000172165.8 ENSMUST00000179353.8 |
||
| CDS-3UTR CAA 90 bp | CACAGGTGCTTCATTGTGGATGGGTGCCCTTCCTTCCACAGGGCTAAGAACCTTGCTTCAATCAACTGGTaGGAGCCAACCACAGAGAAT | + |
|
Preference number: 5 (lower is better) Translates to: HRCFIVDGCPSFHRAKNLASINW*EPTTEN Trigger: ATTCTCTGTGGTTGGCTCCAACCAGTTGATTGAAGC...AAGGTTCTTAGCCCTGTGGAAGGAAGGGCACCCATCCACAATGAAGCACCTGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000027495.15 ENSMUST00000168776.8 ENSMUST00000172165.8 ENSMUST00000179353.8 |
||
| CDS-3UTR CAA 90 bp | AGCCTGGGGTTGGATCCATGCCAGCCAAGGACTATGATTTCCACTGCTATGACCTCTGCGCTTGCATTCTaGCAATCATCTCTTGCATGC | + |
|
Preference number: 5 (lower is better) Translates to: SLGLDPCQPRTMISTAMTSALAF*QSSLAC Trigger: GCATGCAAGAGATGATTGCAAGAATGCAAGCGCAGA...GGTCATAGCAGTGGAAATCATAGTCCTTGGCTGGCATGGATCCAACCCCAGGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000027495.15 ENSMUST00000168776.8 ENSMUST00000172165.8 ENSMUST00000179353.8 |
||
| CDS CCA 90 bp | ATCTCTTGCATGCGGCGGAGCTCAGCCTCCTTTTCAAGCAAGATCTaGTCTTTATTCATGTCCTCATTCTCTACTTTCCTGCCGCCTCTC | + |
|
Preference number: 5 (lower is better) Translates to: ISCMRRSSASFSSKI*SLFMSSFSTFLPPL Trigger: GAGAGGCGGCAGGAAAGTAGAGAATGAGGACATGAATAAAGACCAGATCTTGCTTGAAAAGGAGGCTGAGCTCCGCCGCATGCAAGAGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000027495.15 ENSMUST00000168776.8 ENSMUST00000172165.8 ENSMUST00000179353.8 |
||
| CDS-3UTR CAA 90 bp | CACAGGTGCTTCATTGTGGATGGGTGCCCTTCCTTCCACAGGGCTAAGAACCTTCTAACCTTCTTGCCTTaGGCTTCAATCAACTGGTTG | + |
|
Preference number: 5 (lower is better) Translates to: HRCFIVDGCPSFHRAKNLLTFLP*ASINWL Trigger: CAACCAGTTGATTGAAGCCAAAGGCAAGAAGGTTAG...AAGGTTCTTAGCCCTGTGGAAGGAAGGGCACCCATCCACAATGAAGCACCTGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000027495.15 ENSMUST00000168776.8 ENSMUST00000172165.8 ENSMUST00000179353.8 |
||
| CDS-3UTR CAA 90 bp | CTGCCTGACATTAGAAGACAGGGTAGAAGAGGGAAGTGCCAGAATATAAACCAGTCTTGCAATCATCTCTaGCATGCGGCGGAGCTCAGC | + |
|
Preference number: 5 (lower is better) Translates to: LPDIRRQGRRGKCQNINQSCNHL*HAAELS Trigger: GCTGAGCTCCGCCGCATGCAAGAGATGATTGCAAGA...CTGGTTTATATTCTGGCACTTCCCTCTTCTACCCTGTCTTCTAATGTCAGGCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000027495.15 ENSMUST00000168776.8 ENSMUST00000172165.8 ENSMUST00000179353.8 |
||
| CDS-3UTR CAA 90 bp | CTGCTTTTCAATGAAAGGTTACTAACACAGCTAACAGCAGCGGACTTGAGAGAGTCTTGCAATCATCTCTaGCATGCGGCGGAGCTCAGC | + |
|
Preference number: 5 (lower is better) Translates to: LLFNERLLTQLTAADLRESCNHL*HAAELS Trigger: GCTGAGCTCCGCCGCATGCAAGAGATGATTGCAAGA...CTCTCTCAAGTCCGCTGCTGTTAGCTGTGTTAGTAACCTTTCATTGAAAAGCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000157021.2 |
||
| CDS-3UTR CAA 90 bp | AACGTAAATCCCTGCCTCATCATCAATCAAGTCCTTCCTCCTGCAGCAAATGAATCTTGCAATCATCTCTaGCATGCGGCGGAGCTCAGC | + |
|
Preference number: 5 (lower is better) Translates to: NVNPCLIINQVLPPAANESCNHL*HAAELS Trigger: GCTGAGCTCCGCCGCATGCAAGAGATGATTGCAAGA...TTCATTTGCTGCAGGAGGAAGGACTTGATTGATGATGAGGCAGGGATTTACGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000027495.15 ENSMUST00000168776.8 ENSMUST00000172165.8 ENSMUST00000179353.8 |
||
| CDS TCA 90 bp | TTCTGGATTTATAAACTGAGTTGGTTGTTGCTTAGACATCTTTCTTaGTTTTCCTGTCTGGCCAGCAGGATCACCCAGATGGGGGCCGCC | + |
|
Preference number: 5 (lower is better) Translates to: FWIYKLSWLLLRHLS*FSCLASRITQMGAA Trigger: GGCGGCCCCCATCTGGGTGATCCTGCTGGCCAGACAGGAAAATCAAGAAAGATGTCTAAGCAACAACCAACTCAGTTTATAAATCCAGAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000142401.8 |
||
| CDS-3UTR CAA 90 bp | TTGGATCCATGCCAGCCAAGGACTATGATTTCCACTGCTATGACCTTTTGCACCGCTTCAATCAACTGGTaGGAGCCAACCACAGAGAAT | + |
|
Preference number: 5 (lower is better) Translates to: LDPCQPRTMISTAMTFCTASINW*EPTTEN Trigger: ATTCTCTGTGGTTGGCTCCAACCAGTTGATTGAAGC...GGTGCAAAAGGTCATAGCAGTGGAAATCATAGTCCTTGGCTGGCATGGATCCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000027495.15 ENSMUST00000168776.8 ENSMUST00000172165.8 ENSMUST00000179353.8 |
||
| CDS-3UTR CAA 90 bp | TTGGATCCATGCCAGCCAAGGACTATGATTTCCACTGCTATGACCTTTTGCACCTCTGCGCTTGCATTCTaGCAATCATCTCTTGCATGC | + |
|
Preference number: 5 (lower is better) Translates to: LDPCQPRTMISTAMTFCTSALAF*QSSLAC Trigger: GCATGCAAGAGATGATTGCAAGAATGCAAGCGCAGA...GGTGCAAAAGGTCATAGCAGTGGAAATCATAGTCCTTGGCTGGCATGGATCCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000027495.15 ENSMUST00000168776.8 ENSMUST00000172165.8 ENSMUST00000179353.8 |
||
| CDS-3UTR CAA 90 bp | CTGCCTGACATTAGAAGACAGGGTAGAAGAGGGAAGTGCCAGAATATAAACCAGTCTGCGCTTGCATTCTaGCAATCATCTCTTGCATGC | + |
|
Preference number: 5 (lower is better) Translates to: LPDIRRQGRRGKCQNINQSALAF*QSSLAC Trigger: GCATGCAAGAGATGATTGCAAGAATGCAAGCGCAGA...CTGGTTTATATTCTGGCACTTCCCTCTTCTACCCTGTCTTCTAATGTCAGGCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000027495.15 ENSMUST00000168776.8 ENSMUST00000172165.8 ENSMUST00000179353.8 |
||
| CDS-3UTR CAA 90 bp | AACGTAAATCCCTGCCTCATCATCAATCAAGTCCTTCCTCCTGCAGCAAATGAAGCTTCAATCAACTGGTaGGAGCCAACCACAGAGAAT | + |
|
Preference number: 5 (lower is better) Translates to: NVNPCLIINQVLPPAANEASINW*EPTTEN Trigger: ATTCTCTGTGGTTGGCTCCAACCAGTTGATTGAAGC...TTCATTTGCTGCAGGAGGAAGGACTTGATTGATGATGAGGCAGGGATTTACGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000027495.15 ENSMUST00000168776.8 ENSMUST00000172165.8 ENSMUST00000179353.8 |
||
| CDS-3UTR CAA 90 bp | GCCTTTCGTTCATGGTGTGAAGACATTTATACTACACACACTGAAGAAAATGACTCTTGCAATCATCTCTaGCATGCGGCGGAGCTCAGC | + |
|
Preference number: 5 (lower is better) Translates to: AFRSWCEDIYTTHTEENDSCNHL*HAAELS Trigger: GCTGAGCTCCGCCGCATGCAAGAGATGATTGCAAGA...GTCATTTTCTTCAGTGTGTGTAGTATAAATGTCTTCACACCATGAACGAAAGGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000027495.15 ENSMUST00000168776.8 ENSMUST00000172165.8 ENSMUST00000179353.8 |
||
| CDS-3UTR CAA 90 bp | CTGCTTTTCAATGAAAGGTTACTAACACAGCTAACAGCAGCGGACTTGAGAGAGTCTGCGCTTGCATTCTaGCAATCATCTCTTGCATGC | + |
|
Preference number: 5 (lower is better) Translates to: LLFNERLLTQLTAADLRESALAF*QSSLAC Trigger: GCATGCAAGAGATGATTGCAAGAATGCAAGCGCAGA...CTCTCTCAAGTCCGCTGCTGTTAGCTGTGTTAGTAACCTTTCATTGAAAAGCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000157021.2 |
||
| CDS-3UTR CAA 90 bp | AAAGAGTACTTGTCAGTGATTAGTCAGGCCAGCTATATCATAGAAATTCACTATAATGGGATACTGGCCTaGAGGAGTCTAGTCTGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: KEYLSVISQASYIIEIHYNGILA*RSLVCS Trigger: GGAGCAGACTAGACTCCTCAAGGCCAGTATCCCATT...ATAGTGAATTTCTATGATATAGCTGGCCTGACTAATCACTGACAAGTACTCTTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000027495.15 ENSMUST00000168776.8 ENSMUST00000172165.8 ENSMUST00000179353.8 |
||
| CDS-3UTR CAA 90 bp | ACAAGTACAAGTTACTTCTTAGTGAAAGAGCAAGTATCTGTTAGCAAAAGCAGTAATGGGATACTGGCCTaGAGGAGTCTAGTCTGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: TSTSYFLVKEQVSVSKSSNGILA*RSLVCS Trigger: GGAGCAGACTAGACTCCTCAAGGCCAGTATCCCATT...ACTGCTTTTGCTAACAGATACTTGCTCTTTCACTAAGAAGTAACTTGTACTTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000027495.15 ENSMUST00000168776.8 ENSMUST00000172165.8 ENSMUST00000179353.8 |
||
| CDS-3UTR CAA 90 bp | GCCTTTCGTTCATGGTGTGAAGACATTTATACTACACACACTGAAGAAAATGACCTAACCTTCTTGCCTTaGGCTTCAATCAACTGGTTG | + |
|
Preference number: 5 (lower is better) Translates to: AFRSWCEDIYTTHTEENDLTFLP*ASINWL Trigger: CAACCAGTTGATTGAAGCCAAAGGCAAGAAGGTTAG...GTCATTTTCTTCAGTGTGTGTAGTATAAATGTCTTCACACCATGAACGAAAGGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000027495.15 ENSMUST00000168776.8 ENSMUST00000172165.8 ENSMUST00000179353.8 |
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| CDS-3UTR CAA 90 bp | CATCTTATTAGTACTACTGAGTTTTGGACTGAATTAAACGTAAATCCCTGCCTCCTAACCTTCTTGCCTTaGGCTTCAATCAACTGGTTG | + |
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Preference number: 5 (lower is better) Translates to: HLISTTEFWTELNVNPCLLTFLP*ASINWL Trigger: CAACCAGTTGATTGAAGCCAAAGGCAAGAAGGTTAG...GAGGCAGGGATTTACGTTTAATTCAGTCCAAAACTCAGTAGTACTAATAAGATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000027495.15 ENSMUST00000168776.8 ENSMUST00000172165.8 ENSMUST00000179353.8 |
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| CDS-3UTR CAA 90 bp | CATCTTATTAGTACTACTGAGTTTTGGACTGAATTAAACGTAAATCCCTGCCTCCTTGATTGGGAAGATTaGCAAATCCAACATAGCCAG | + |
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Preference number: 5 (lower is better) Translates to: HLISTTEFWTELNVNPCLLDWED*QIQHSQ Trigger: CTGGCTATGTTGGATTTGCAAATCTTCCCAATCAAG...GAGGCAGGGATTTACGTTTAATTCAGTCCAAAACTCAGTAGTACTAATAAGATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027495.15 ENSMUST00000168776.8 ENSMUST00000179353.8 |
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| CDS-3UTR CAA 90 bp | AAAGAGTACTTGTCAGTGATTAGTCAGGCCAGCTATATCATAGAAATTCACTATCTTGATTGGGAAGATTaGCAAATCCAACATAGCCAG | + |
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Preference number: 5 (lower is better) Translates to: KEYLSVISQASYIIEIHYLDWED*QIQHSQ Trigger: CTGGCTATGTTGGATTTGCAAATCTTCCCAATCAAG...ATAGTGAATTTCTATGATATAGCTGGCCTGACTAATCACTGACAAGTACTCTTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027495.15 ENSMUST00000168776.8 ENSMUST00000179353.8 |
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| CDS GCA 72 bp | CCGAGAGCCCCGCTGTCACTGTCACCACCCTGCATCTaGATCTGCATCTGCGCTTGCATTCTTGCAATCATC | + |
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Preference number: 6 (lower is better) Translates to: PRAPLSLSPPCI*ICICACILAII Trigger: GATGATTGCAAGAATGCAAGCGCAGATGCAGATGCAGATGCAGGGTGGTGACAGTGACAGCGGGGCTCTCGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000027495.15 ENSMUST00000157021.2 ENSMUST00000168776.8 ENSMUST00000172165.8 ENSMUST00000179353.8 |
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| CDS GCA 72 bp | CTGTCACCACCCTGCATCTGCATCTGCATCTGCGCTTaGATTCTTGCAATCATCTCTTGCATGCGGCGGAGC | + |
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Preference number: 6 (lower is better) Translates to: LSPPCICICICA*ILAIISCMRRS Trigger: GCTCCGCCGCATGCAAGAGATGATTGCAAGAATGCAAGCGCAGATGCAGATGCAGATGCAGGGTGGTGACAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000027495.15 ENSMUST00000157021.2 ENSMUST00000168776.8 ENSMUST00000172165.8 ENSMUST00000179353.8 |
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| CDS GCA 72 bp | GCCCCGCTGTCACTGTCACCACCCTGCATCTGCATCTaGATCTGCGCTTGCATTCTTGCAATCATCTCTTGC | + |
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Preference number: 6 (lower is better) Translates to: APLSLSPPCICI*ICACILAIISC Trigger: GCAAGAGATGATTGCAAGAATGCAAGCGCAGATGCAGATGCAGATGCAGGGTGGTGACAGTGACAGCGGGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000027495.15 ENSMUST00000157021.2 ENSMUST00000168776.8 ENSMUST00000172165.8 ENSMUST00000179353.8 |
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| CDS GCA 72 bp | CTGTCACTGTCACCACCCTGCATCTGCATCTGCATCTaGGCTTGCATTCTTGCAATCATCTCTTGCATGCGG | + |
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Preference number: 6 (lower is better) Translates to: LSLSPPCICICI*ACILAIISCMR Trigger: CCGCATGCAAGAGATGATTGCAAGAATGCAAGCGCAGATGCAGATGCAGATGCAGGGTGGTGACAGTGACAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000027495.15 ENSMUST00000157021.2 ENSMUST00000168776.8 ENSMUST00000172165.8 ENSMUST00000179353.8 |
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| CDS GCA 72 bp | GCATCTGCGCTTGCATTCTTGCAATCATCTCTTGCATaGGGCGGAGCTCAGCCTCCTTTTCAAGCAAGATCT | + |
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Preference number: 6 (lower is better) Translates to: ASALAFLQSSLA*GGAQPPFQARS Trigger: AGATCTTGCTTGAAAAGGAGGCTGAGCTCCGCCGCATGCAAGAGATGATTGCAAGAATGCAAGCGCAGATGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000027495.15 ENSMUST00000157021.2 ENSMUST00000168776.8 ENSMUST00000172165.8 ENSMUST00000179353.8 |
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| CDS GCA 72 bp | ATCTGCATCTGCGCTTGCATTCTTGCAATCATCTCTTaGATGCGGCGGAGCTCAGCCTCCTTTTCAAGCAAG | + |
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Preference number: 6 (lower is better) Translates to: ICICACILAIIS*MRRSSASFSSK Trigger: CTTGCTTGAAAAGGAGGCTGAGCTCCGCCGCATGCAAGAGATGATTGCAAGAATGCAAGCGCAGATGCAGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000027495.15 ENSMUST00000157021.2 ENSMUST00000168776.8 ENSMUST00000172165.8 ENSMUST00000179353.8 |
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| CDS CAA 72 bp | CATCTGCATCTGCGCTTGCATTCTTGCAATCATCTCTaGCATGCGGCGGAGCTCAGCCTCCTTTTCAAGCAA | + |
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Preference number: 6 (lower is better) Translates to: HLHLRLHSCNHL*HAAELSLLFKQ Trigger: TTGCTTGAAAAGGAGGCTGAGCTCCGCCGCATGCAAGAGATGATTGCAAGAATGCAAGCGCAGATGCAGATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000027495.15 ENSMUST00000157021.2 ENSMUST00000168776.8 ENSMUST00000172165.8 ENSMUST00000179353.8 |
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| CDS CCA 72 bp | CCCCGCTCTTCAATCTCAACAGTCGAAGCCTCTATCTaGACAGTTCTTTCAATTTTCTCTGCAGCTCCAGGA | + |
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Preference number: 6 (lower is better) Translates to: PRSSISTVEASI*TVLSIFSAAPG Trigger: TCCTGGAGCTGCAGAGAAAATTGAAAGAACTGTCCAGATAGAGGCTTCGACTGTTGAGATTGAAGAGCGGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 11 transcripts: ENSMUST00000027495.15 ENSMUST00000112912.8 ENSMUST00000129211.8 ENSMUST00000131175.9 ENSMUST00000136182.8 ENSMUST00000142401.8 ENSMUST00000149532.8 ENSMUST00000150931.2 ENSMUST00000168776.8 ENSMUST00000172165.8 ENSMUST00000179353.8 |
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| CDS TCA 72 bp | TTTCTGGGTAGAGATCAGTCAGGAATAAGCTGTTTATaGGAGTTGATTTTCCTAGACCAGATTCACCAACCA | + |
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Preference number: 6 (lower is better) Translates to: FLGRDQSGISCL*ELIFLDQIHQP Trigger: TGGTTGGTGAATCTGGTCTAGGAAAATCAACTCTCATAAACAGCTTATTCCTGACTGATCTCTACCCAGAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 12 transcripts: ENSMUST00000027495.15 ENSMUST00000112912.8 ENSMUST00000129211.8 ENSMUST00000131175.9 ENSMUST00000136182.8 ENSMUST00000142401.8 ENSMUST00000149532.8 ENSMUST00000150931.2 ENSMUST00000153826.8 ENSMUST00000168776.8 ENSMUST00000172165.8 ENSMUST00000179353.8 |
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| CDS CCA 72 bp | GGGAAGATTTGCAAATCCAACATAGCCAGGAGTTTCTaGATTTATAAACTGAGTTGGTTGTTGCTTAGACAT | + |
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Preference number: 6 (lower is better) Translates to: GKICKSNIARSF*IYKLSWLLLRH Trigger: ATGTCTAAGCAACAACCAACTCAGTTTATAAATCCAGAAACTCCTGGCTATGTTGGATTTGCAAATCTTCCC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 10 transcripts: ENSMUST00000027495.15 ENSMUST00000112912.8 ENSMUST00000129211.8 ENSMUST00000131175.9 ENSMUST00000142401.8 ENSMUST00000149532.8 ENSMUST00000150931.2 ENSMUST00000153826.8 ENSMUST00000168776.8 ENSMUST00000179353.8 |
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