Pregenerated sensors for SEPTIN14 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000034219Ensembl transcript IDs: ENSMUST00000042266.13, ENSMUST00000182386.3
Found 29 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR TCA 90 bp | GGTACACGAATGGAGGATAATGGGGTTCTGAACTCAGACAGGACGGTGAGAGAACTGGGCCCGTGTCACTaGAGCCCAGCTTCTGCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: GTRMEDNGVLNSDRTVRELGPCH*SPASAA Trigger: GGCTGCAGAAGCTGGGCTTCAGTGACACGGGCCCAG...TTCTCTCACCGTCCTGTCTGAGTTCAGAACCCCATTATCCTCCATTCGTGTACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042266.13 |
||
| CDS-3UTR TCA 90 bp | GGTACACGAATGGAGGATAATGGGGTTCTGAACTCAGACAGGACGGTGAGAGAACACCTGAGCCTGTGCTaGCTCAGAAGCAGCCTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: GTRMEDNGVLNSDRTVREHLSLC*LRSSLH Trigger: ATGAAGGCTGCTTCTGAGTCAGCACAGGCTCAGGTG...TTCTCTCACCGTCCTGTCTGAGTTCAGAACCCCATTATCCTCCATTCGTGTACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042266.13 |
||
| CDS-3UTR TCA 90 bp | GTGGGTACACGAATGGAGGATAATGGGGTTCTGAACTCAGACAGGACGGTGAGAATGTTGGTGCACACCTaGGCCTGTGCTGACTCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: VGTRMEDNGVLNSDRTVRMLVHT*ACADSE Trigger: TTCTGAGTCAGCACAGGCTCAGGTGTGCACCAACAT...TCTCACCGTCCTGTCTGAGTTCAGAACCCCATTATCCTCCATTCGTGTACCCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042266.13 |
||
| CDS-3UTR CCA 90 bp | GGTACACGAATGGAGGATAATGGGGTTCTGAACTCAGACAGGACGGTGAGAGAACTCTTGAAAACTCACTaGCCGGTTGTCTGGGCCCGT | + |
|
Preference number: 4 (lower is better) Translates to: GTRMEDNGVLNSDRTVRELLKTH*PVVWAR Trigger: ACGGGCCCAGACAACCGGCCAGTGAGTTTTCAAGAG...TTCTCTCACCGTCCTGTCTGAGTTCAGAACCCCATTATCCTCCATTCGTGTACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042266.13 |
||
| CDS-3UTR GCA 90 bp | GTGGGTACACGAATGGAGGATAATGGGGTTCTGAACTCAGACAGGACGGTGAGACCTTCTTTATGTTGGTaGACACCTGAGCCTGTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: VGTRMEDNGVLNSDRTVRPSLCW*TPEPVL Trigger: CAGCACAGGCTCAGGTGTGCACCAACATAAAGAAGG...TCTCACCGTCCTGTCTGAGTTCAGAACCCCATTATCCTCCATTCGTGTACCCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042266.13 |
||
| CDS-3UTR GCA 90 bp | GTGGGTACACGAATGGAGGATAATGGGGTTCTGAACTCAGACAGGACGGTGAGATTCAGGATCTCCTCTTaGTGGATTCTCTTCAGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: VGTRMEDNGVLNSDRTVRFRISS*WILFRC Trigger: GCACCTGAAGAGAATCCAGCAAGAGGAGATCCTGAA...TCTCACCGTCCTGTCTGAGTTCAGAACCCCATTATCCTCCATTCGTGTACCCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042266.13 |
||
| CDS-3UTR TCA 90 bp | GTGGGTACACGAATGGAGGATAATGGGGTTCTGAACTCAGACAGGACGGTGAGAGCTTCCTTGTTTATCTaGTCACCATACCCAACTGTC | + |
|
Preference number: 4 (lower is better) Translates to: VGTRMEDNGVLNSDRTVRASLFI*SPYPTV Trigger: GACAGTTGGGTATGGTGATCAGATAAACAAGGAAGC...TCTCACCGTCCTGTCTGAGTTCAGAACCCCATTATCCTCCATTCGTGTACCCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042266.13 |
||
| CDS-3UTR TCA 90 bp | GTGGGTACACGAATGGAGGATAATGGGGTTCTGAACTCAGACAGGACGGTGAGATCATCGACCTGGAACTaGTATATCTGGATGCCATTG | + |
|
Preference number: 4 (lower is better) Translates to: VGTRMEDNGVLNSDRTVRSSTWN*YIWMPL Trigger: CAATGGCATCCAGATATATCAGTTCCAGGTCGATGA...TCTCACCGTCCTGTCTGAGTTCAGAACCCCATTATCCTCCATTCGTGTACCCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042266.13 |
||
| CDS-3UTR CCA 90 bp | GGTACACGAATGGAGGATAATGGGGTTCTGAACTCAGACAGGACGGTGAGAGAACGACTGGCTGGTAGCTaGCTTCCTTGTTTATCTGAT | + |
|
Preference number: 4 (lower is better) Translates to: GTRMEDNGVLNSDRTVRERLAGS*LPCLSD Trigger: ATCAGATAAACAAGGAAGCCAGCTACCAGCCAGTCG...TTCTCTCACCGTCCTGTCTGAGTTCAGAACCCCATTATCCTCCATTCGTGTACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042266.13 |
||
| CDS-3UTR GCA 90 bp | GTGGGTACACGAATGGAGGATAATGGGGTTCTGAACTCAGACAGGACGGTGAGATCACCCTTCTGTCAATaGTCTTCATTGTTAGCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: VGTRMEDNGVLNSDRTVRSPFCQ*SSLLAG Trigger: ACCTGCTAACAATGAAGAGCATTGACAGAAGGGTGA...TCTCACCGTCCTGTCTGAGTTCAGAACCCCATTATCCTCCATTCGTGTACCCAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042266.13 |
||
| CDS-3UTR CCA 90 bp | GTGGGTACACGAATGGAGGATAATGGGGTTCTGAACTCAGACAGGACGGTGAGACAAAATGCCCAAGAGTaGATAAGCAACGGATGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: VGTRMEDNGVLNSDRTVRQNAQE*ISNGCS Trigger: AGAACATCCGTTGCTTATCCACTCTTGGGCATTTTG...TCTCACCGTCCTGTCTGAGTTCAGAACCCCATTATCCTCCATTCGTGTACCCAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042266.13 |
||
| CDS-3UTR TCA 90 bp | GGTACACGAATGGAGGATAATGGGGTTCTGAACTCAGACAGGACGGTGAGAGAAGAATCCTTTCTGGATTaGTTTGTTCACCAGCTGAGT | + |
|
Preference number: 4 (lower is better) Translates to: GTRMEDNGVLNSDRTVREESFLD*FVHQLS Trigger: ACTCAGCTGGTGAACAAATCAATCCAGAAAGGATTC...TTCTCTCACCGTCCTGTCTGAGTTCAGAACCCCATTATCCTCCATTCGTGTACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042266.13 |
||
| CDS-3UTR TCA 90 bp | GTGGGTACACGAATGGAGGATAATGGGGTTCTGAACTCAGACAGGACGGTGAGATCATTATGTTGTTCTTaGACCTCTGTAGGTCGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: VGTRMEDNGVLNSDRTVRSLCCS*TSVGRS Trigger: AGAACGACCTACAGAGGTTCAAGAACAACATAATGA...TCTCACCGTCCTGTCTGAGTTCAGAACCCCATTATCCTCCATTCGTGTACCCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042266.13 |
||
| CDS-3UTR CCA 90 bp | GGTACACGAATGGAGGATAATGGGGTTCTGAACTCAGACAGGACGGTGAGAGAAGGAACTCTCGTCTCTTaGCTTCATACATCTCTTGAA | + |
|
Preference number: 4 (lower is better) Translates to: GTRMEDNGVLNSDRTVREGTLVS*LHTSLE Trigger: TTCAAGAGATGTATGAAGCCAAGAGACGAGAGTTCC...TTCTCTCACCGTCCTGTCTGAGTTCAGAACCCCATTATCCTCCATTCGTGTACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042266.13 |
||
| CDS-3UTR GCA 90 bp | GGTACACGAATGGAGGATAATGGGGTTCTGAACTCAGACAGGACGGTGAGAGAAATATCTGGATGCCATTaGTGTTCAGCTCACTCATTA | + |
|
Preference number: 4 (lower is better) Translates to: GTRMEDNGVLNSDRTVREISGCH*CSAHSL Trigger: TAATGAGTGAGCTGAACAGCAATGGCATCCAGATAT...TTCTCTCACCGTCCTGTCTGAGTTCAGAACCCCATTATCCTCCATTCGTGTACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042266.13 |
||
| CDS-3UTR CCA 90 bp | GTGGGTACACGAATGGAGGATAATGGGGTTCTGAACTCAGACAGGACGGTGAGAAAAGAGAATCCTTTCTaGATTGATTTGTTCACCAGC | + |
|
Preference number: 4 (lower is better) Translates to: VGTRMEDNGVLNSDRTVRKENPF*IDLFTS Trigger: GCTGGTGAACAAATCAATCCAGAAAGGATTCTCTTT...TCTCACCGTCCTGTCTGAGTTCAGAACCCCATTATCCTCCATTCGTGTACCCAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042266.13 |
||
| CDS-3UTR CCA 90 bp | GGTACACGAATGGAGGATAATGGGGTTCTGAACTCAGACAGGACGGTGAGAGAAGACAGTCAATCTCAGTaGAATATTTCTTTCCAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: GTRMEDNGVLNSDRTVREDSQSQ*NISFQK Trigger: CTTCTGGAAAGAAATATTCCACTGAGATTGACTGTC...TTCTCTCACCGTCCTGTCTGAGTTCAGAACCCCATTATCCTCCATTCGTGTACC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042266.13 |
||
| CDS-3UTR CAA 90 bp | GTGGGTACACGAATGGAGGATAATGGGGTTCTGAACTCAGACAGGACGGTGAGAAGCAGGTCCAGGGACTaGAGGGAATGTCCTGTAGGG | + |
|
Preference number: 5 (lower is better) Translates to: VGTRMEDNGVLNSDRTVRSRSRD*RECPVG Trigger: CCCTACAGGACATTCCCTCAAGTCCCTGGACCTGCT...TCTCACCGTCCTGTCTGAGTTCAGAACCCCATTATCCTCCATTCGTGTACCCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042266.13 |
||
| CDS-3UTR CAA 90 bp | GTGGGTACACGAATGGAGGATAATGGGGTTCTGAACTCAGACAGGACGGTGAGAGTCAACTCCTTCTCCTaGACTCGCTGCATGAACGTC | + |
|
Preference number: 5 (lower is better) Translates to: VGTRMEDNGVLNSDRTVRVNSFS*TRCMNV Trigger: GACGTTCATGCAGCGAGTCAAGGAGAAGGAGTTGAC...TCTCACCGTCCTGTCTGAGTTCAGAACCCCATTATCCTCCATTCGTGTACCCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042266.13 |
||
| CDS-3UTR CAA 90 bp | GTGGGTACACGAATGGAGGATAATGGGGTTCTGAACTCAGACAGGACGGTGAGAACGGATGTTCTCCTTTaGTGGATCTTCACTGCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: VGTRMEDNGVLNSDRTVRTDVLL*WIFTAR Trigger: CCTGGCAGTGAAGATCCACAAAAGGAGAACATCCGT...TCTCACCGTCCTGTCTGAGTTCAGAACCCCATTATCCTCCATTCGTGTACCCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042266.13 |
||
| CDS-3UTR CAA 90 bp | GTGGGTACACGAATGGAGGATAATGGGGTTCTGAACTCAGACAGGACGGTGAGATGCATGAACGTCTGCTaGAGTTCTTCCTCCTCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: VGTRMEDNGVLNSDRTVRCMNVC*SSSSSF Trigger: GAAGGAGGAGGAAGAACTCAAGCAGACGTTCATGCA...TCTCACCGTCCTGTCTGAGTTCAGAACCCCATTATCCTCCATTCGTGTACCCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042266.13 |
||
| CDS-3UTR CAA 90 bp | GGTACACGAATGGAGGATAATGGGGTTCTGAACTCAGACAGGACGGTGAGAGAACTCATTATGTTGTTCTaGAACCTCTGTAGGTCGTTC | + |
|
Preference number: 5 (lower is better) Translates to: GTRMEDNGVLNSDRTVRELIMLF*NLCRSF Trigger: GAACGACCTACAGAGGTTCAAGAACAACATAATGAG...TTCTCTCACCGTCCTGTCTGAGTTCAGAACCCCATTATCCTCCATTCGTGTACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042266.13 |
||
| CDS-3UTR CAA 90 bp | GGTACACGAATGGAGGATAATGGGGTTCTGAACTCAGACAGGACGGTGAGAGAATATATCTGGATGCCATaGCTGTTCAGCTCACTCATT | + |
|
Preference number: 5 (lower is better) Translates to: GTRMEDNGVLNSDRTVREYIWMP*LFSSLI Trigger: AATGAGTGAGCTGAACAGCAATGGCATCCAGATATA...TTCTCTCACCGTCCTGTCTGAGTTCAGAACCCCATTATCCTCCATTCGTGTACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042266.13 |
||
| CDS-3UTR CAA 90 bp | GGTACACGAATGGAGGATAATGGGGTTCTGAACTCAGACAGGACGGTGAGAGAAATTCTCTTTCCAACTTaGACCTCCTCCATACTTCCT | + |
|
Preference number: 5 (lower is better) Translates to: GTRMEDNGVLNSDRTVREILFPT*TSSILP Trigger: AGGAAGTATGGAGGAGGTCAAAGTTGGAAAGAGAAT...TTCTCTCACCGTCCTGTCTGAGTTCAGAACCCCATTATCCTCCATTCGTGTACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042266.13 |
||
| CDS-3UTR CAA 90 bp | GTGGGTACACGAATGGAGGATAATGGGGTTCTGAACTCAGACAGGACGGTGAGAGTATTGAACAGTGTATaGATCAGGGTTGTTTTTCCA | + |
|
Preference number: 5 (lower is better) Translates to: VGTRMEDNGVLNSDRTVRVLNSV*IRVVFP Trigger: TGGAAAAACAACCCTGATCAATACACTGTTCAATAC...TCTCACCGTCCTGTCTGAGTTCAGAACCCCATTATCCTCCATTCGTGTACCCAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042266.13 |
||
| CDS CCA 72 bp | TTCATACATCTCTTGAAAACTCACTGGCCGGTTGTCTaGGCCCGTGTCACTGAAGCCCAGCTTCTGCAGCCT | + |
|
Preference number: 6 (lower is better) Translates to: FIHLLKTHWPVV*ARVTEAQLLQP Trigger: AGGCTGCAGAAGCTGGGCTTCAGTGACACGGGCCCAGACAACCGGCCAGTGAGTTTTCAAGAGATGTATGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042266.13 ENSMUST00000182386.3 |
||
| CDS TCA 72 bp | TGCCATTGCTGTTCAGCTCACTCATTATGTTGTTCTTaGACCTCTGTAGGTCGTTCTTTGAAAGCGAGTCAG | + |
|
Preference number: 6 (lower is better) Translates to: CHCCSAHSLCCS*TSVGRSLKASQ Trigger: CTGACTCGCTTTCAAAGAACGACCTACAGAGGTTCAAGAACAACATAATGAGTGAGCTGAACAGCAATGGCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042266.13 ENSMUST00000182386.3 |
||
| CDS CCA 72 bp | GAGTGGGCAAACATTCAAACCCAAAATGCCCAAGAGTaGATAAGCAACGGATGTTCTCCTTTTGTGGATCTT | + |
|
Preference number: 6 (lower is better) Translates to: EWANIQTQNAQE*ISNGCSPFVDL Trigger: AAGATCCACAAAAGGAGAACATCCGTTGCTTATCCACTCTTGGGCATTTTGGGTTTGAATGTTTGCCCACTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042266.13 ENSMUST00000182386.3 |
||
| CDS CAA 72 bp | ATGCCATTGCTGTTCAGCTCACTCATTATGTTGTTCTaGAACCTCTGTAGGTCGTTCTTTGAAAGCGAGTCA | + |
|
Preference number: 6 (lower is better) Translates to: MPLLFSSLIMLF*NLCRSFFESES Trigger: TGACTCGCTTTCAAAGAACGACCTACAGAGGTTCAAGAACAACATAATGAGTGAGCTGAACAGCAATGGCAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042266.13 ENSMUST00000182386.3 |
||