RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SEPTIN11 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000058013

Ensembl transcript IDs: ENSMUST00000074733.11, ENSMUST00000201421.4, ENSMUST00000201700.4, ENSMUST00000202196.4, ENSMUST00000202217.3, ENSMUST00000202308.4

Found 272 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp TCGTCCTCCCACAGCACAGATGACAATTACAGGGGACCACAGTCCTaGAGGAGCAGAAGATGCTCACCGTGCAGAGAGGCCAAAGCTGTC +
Preference number: 1 (lower is better)
Translates to: SSSHSTDDNYRGPQS*RSRRCSPCREAKAV
Trigger: GACAGCTTTGGCCTCTCTGCACGGTGAGCATCTTCTGCTCCTTCAGGACTGTGGTCCCCTGTAATTGTCATCTGTGCTGTGGGAGGACGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000074733.11
3UTR TCA 90 bp AGCAAGAAACCCACACCTAACCTCAGGTGGAGGAGCTCCCCTGGCTaGGAGAGACCCTTCTGGATCGATTCATACAGAGCCCAAGCTGAG +
Preference number: 1 (lower is better)
Translates to: SKKPTPNLRWRSSPG*ERPFWIDSYRAQAE
Trigger: CTCAGCTTGGGCTCTGTATGAATCGATCCAGAAGGGTCTCTCTCAGCCAGGGGAGCTCCTCCACCTGAGGTTAGGTGTGGGTTTCTTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000074733.11
3UTR GCA 90 bp ATAAAGCTCACACAAGCAGTGGCCGGAACAAGCAGAGGACACCAGTaGTCAAGCTCTTACGTGGTGCCCGGTGAAGAAGCAAACGCAGCG +
Preference number: 1 (lower is better)
Translates to: IKLTQAVAGTSRGHQ*SSSYVVPGEEANAA
Trigger: CGCTGCGTTTGCTTCTTCACCGGGCACCACGTAAGAGCTTGAGCACTGGTGTCCTCTGCTTGTTCCGGCCACTGCTTGTGTGAGCTTTAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000074733.11
3UTR CCA 90 bp AACCGGAGAGCATCTAGCTCTTTGGCACTCGAAACCAAGGCTGTATaGAAACCATTCTATGTGGGGCGCAGGGGCGGCATGAGGGTTGCT +
Preference number: 1 (lower is better)
Translates to: NRRASSSLALETKAV*KPFYVGRRGGMRVA
Trigger: AGCAACCCTCATGCCGCCCCTGCGCCCCACATAGAATGGTTTCCATACAGCCTTGGTTTCGAGTGCCAAAGAGCTAGATGCTCTCCGGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000201700.4
3UTR TCA 90 bp CTGGGAGGACCACACAGAGACAGTACGATGTGGGTAGGGGACGCCTaGACAACCAACTCTGTGGAACACTTAGGGGTGTGTGAGGAAAGT +
Preference number: 1 (lower is better)
Translates to: LGGPHRDSTMWVGDA*TTNSVEHLGVCEES
Trigger: ACTTTCCTCACACACCCCTAAGTGTTCCACAGAGTTGGTTGTTCAGGCGTCCCCTACCCACATCGTACTGTCTCTGTGTGGTCCTCCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000074733.11
3UTR CCA 90 bp AAGTTCAAGGAAGGGCACTTTCCCACTAGTTCGGACAGCTGCTACTaGGGTGCCACAGGAAGGGACAACCGGAGAGCATCTAGCTCTTTG +
Preference number: 1 (lower is better)
Translates to: KFKEGHFPTSSDSCY*GATGRDNRRASSSL
Trigger: CAAAGAGCTAGATGCTCTCCGGTTGTCCCTTCCTGTGGCACCCCAGTAGCAGCTGTCCGAACTAGTGGGAAAGTGCCCTTCCTTGAACTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000201700.4
3UTR GCA 90 bp TTACCCCACTTTCCTCGGTCCAAAGCGACATACAAGGGACAGACATaGTTCCTGCCGCCACTTGGAACAGGCATACAAGGCAAATCGACT +
Preference number: 1 (lower is better)
Translates to: LPHFPRSKATYKGQT*FLPPLGTGIQGKST
Trigger: AGTCGATTTGCCTTGTATGCCTGTTCCAAGTGGCGGCAGGAAGCATGTCTGTCCCTTGTATGTCGCTTTGGACCGAGGAAAGTGGGGTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000074733.11
3UTR TCA 90 bp CAATATTTGACCCAGACTTTAAAGAATGGGAGGCGATGGTGGAGATaGGGTAACTCTTCCCCAACTCGAGTGGACAGACAGCTCCCGCTC +
Preference number: 1 (lower is better)
Translates to: QYLTQTLKNGRRWWR*GNSSPTRVDRQLPL
Trigger: GAGCGGGAGCTGTCTGTCCACTCGAGTTGGGGAAGAGTTACCTCATCTCCACCATCGCCTCCCATTCTTTAAAGTCTGGGTCAAATATTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000201421.4
3UTR GCA 90 bp ACTTTCCTCGGTCCAAAGCGACATACAAGGGACAGACATGCTTCCTaGCGCCACTTGGAACAGGCATACAAGGCAAATCGACTTTCGAGA +
Preference number: 1 (lower is better)
Translates to: TFLGPKRHTRDRHAS*RHLEQAYKANRLSR
Trigger: TCTCGAAAGTCGATTTGCCTTGTATGCCTGTTCCAAGTGGCGGCAGGAAGCATGTCTGTCCCTTGTATGTCGCTTTGGACCGAGGAAAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000074733.11
3UTR GCA 90 bp AAGGTGCACGGGATGGAGAGGAAGCAAGAGCTGTTGCTGGTGAGTTaGAAAGTAAAGGAGGACGAAAGCAAGAAACCCACACCTAACCTC +
Preference number: 1 (lower is better)
Translates to: KVHGMERKQELLLVS*KVKEDESKKPTPNL
Trigger: GAGGTTAGGTGTGGGTTTCTTGCTTTCGTCCTCCTTTACTTTGCAACTCACCAGCAACAGCTCTTGCTTCCTCTCCATCCCGTGCACCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000074733.11
3UTR TCA 90 bp GCCCAAGCTGAGAAAACAGTTCTCAACTGCTACCCGAGTACTTGCTaGCCAAGTACTCAGTCGTCCTCCCACAGCACAGATGACAATTAC +
Preference number: 1 (lower is better)
Translates to: AQAEKTVLNCYPSTC*PSTQSSSHSTDDNY
Trigger: GTAATTGTCATCTGTGCTGTGGGAGGACGACTGAGTACTTGGTCAGCAAGTACTCGGGTAGCAGTTGAGAACTGTTTTCTCAGCTTGGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000074733.11
3UTR TCA 90 bp TGGCTGAGAGAGACCCTTCTGGATCGATTCATACAGAGCCCAAGCTaGGAAAACAGTTCTCAACTGCTACCCGAGTACTTGCTGACCAAG +
Preference number: 1 (lower is better)
Translates to: WLRETLLDRFIQSPS*ENSSQLLPEYLLTK
Trigger: CTTGGTCAGCAAGTACTCGGGTAGCAGTTGAGAACTGTTTTCTCAGCTTGGGCTCTGTATGAATCGATCCAGAAGGGTCTCTCTCAGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000074733.11
3UTR CCA 90 bp GTCCAAAGCGACATACAAGGGACAGACATGCTTCCTGCCGCCACTTaGAACAGGCATACAAGGCAAATCGACTTTCGAGAAACAAAGTCC +
Preference number: 1 (lower is better)
Translates to: VQSDIQGTDMLPAAT*NRHTRQIDFRETKS
Trigger: GGACTTTGTTTCTCGAAAGTCGATTTGCCTTGTATGCCTGTTCCAAGTGGCGGCAGGAAGCATGTCTGTCCCTTGTATGTCGCTTTGGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000074733.11
3UTR CCA 90 bp GACTTTTGGAACCTGACAACTCCAGACACTTATGAATGGCAAAGCTaGGGGATTCAGATGGACAGTTCTGGGAGGACCACACAGAGACAG +
Preference number: 1 (lower is better)
Translates to: DFWNLTTPDTYEWQS*GIQMDSSGRTTQRQ
Trigger: CTGTCTCTGTGTGGTCCTCCCAGAACTGTCCATCTGAATCCCCCAGCTTTGCCATTCATAAGTGTCTGGAGTTGTCAGGTTCCAAAAGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000074733.11
3UTR GCA 90 bp GGTAATTCTGGAGGTGTGCAAGCACGGGATGCACAACTAAGAAAATaGAAGTTGTCATGGCTACTCAGGGTTTTAGCTGAGCTGCTGAGG +
Preference number: 1 (lower is better)
Translates to: GNSGGVQARDAQLRK*KLSWLLRVLAELLR
Trigger: CCTCAGCAGCTCAGCTAAAACCCTGAGTAGCCATGACAACTTGCATTTTCTTAGTTGTGCATCCCGTGCTTGCACACCTCCAGAATTACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000074733.11
3UTR GCA 90 bp GCTCCCACTAGCTGCTGTTTGGAGTATAAAATCCAGCAGCTGGCTTaGCATACTGTCTCTAACAGAACAGAGAACCCACGTGAACAACTG +
Preference number: 1 (lower is better)
Translates to: APTSCCLEYKIQQLA*HTVSNRTENPREQL
Trigger: CAGTTGTTCACGTGGGTTCTCTGTTCTGTTAGAGACAGTATGGCAAGCCAGCTGCTGGATTTTATACTCCAAACAGCAGCTAGTGGGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000201700.4
3UTR CCA 90 bp AACCAGCTCCCACTAGCTGCTGTTTGGAGTATAAAATCCAGCAGCTaGCTTGCCATACTGTCTCTAACAGAACAGAGAACCCACGTGAAC +
Preference number: 1 (lower is better)
Translates to: NQLPLAAVWSIKSSS*LAILSLTEQRTHVN
Trigger: GTTCACGTGGGTTCTCTGTTCTGTTAGAGACAGTATGGCAAGCCAGCTGCTGGATTTTATACTCCAAACAGCAGCTAGTGGGAGCTGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000201700.4
3UTR GCA 90 bp GAGGCCAAAGCTGTCCAACCAAAAACTAAAAAGAAGTGGCCATTGTaGACTGAGCATAAAGGAGAAGCCACTAGCCTGAGATCCGGAATG +
Preference number: 1 (lower is better)
Translates to: EAKAVQPKTKKKWPL*TEHKGEATSLRSGM
Trigger: CATTCCGGATCTCAGGCTAGTGGCTTCTCCTTTATGCTCAGTGCACAATGGCCACTTCTTTTTAGTTTTTGGTTGGACAGCTTTGGCCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000074733.11
3UTR GCA 90 bp GAGCTTTTAATCAGGGTTCAAGGCCAAATGGCTTTCACTCTGGCTTaGCAGGTAGAGACGCCATTCTCAGTACTAGCTTTTCCAACGCAA +
Preference number: 1 (lower is better)
Translates to: ELLIRVQGQMAFTLA*QVETPFSVLAFPTQ
Trigger: TTGCGTTGGAAAAGCTAGTACTGAGAATGGCGTCTCTACCTGGCAAGCCAGAGTGAAAGCCATTTGGCCTTGAACCCTGATTAAAAGCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000201700.4
3UTR GCA 90 bp CCGGCTCCCTTGTTCTTTGGACATGTTTCCCACTGCCTCAGAGCTTaGAAAAGCAATGTGTGTAGAGCATGCTTTACTAGTCTTTCAATG +
Preference number: 1 (lower is better)
Translates to: PAPLFFGHVSHCLRA*KSNVCRACFTSLSM
Trigger: CATTGAAAGACTAGTAAAGCATGCTCTACACACATTGCTTTTGCAAGCTCTGAGGCAGTGGGAAACATGTCCAAAGAACAAGGGAGCCGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000201700.4
3UTR GCA 90 bp TTAGACCAGTTTCCGGCTCCCTTGTTCTTTGGACATGTTTCCCACTaGCTCAGAGCTTGCAAAAGCAATGTGTGTAGAGCATGCTTTACT +
Preference number: 1 (lower is better)
Translates to: LDQFPAPLFFGHVSH*LRACKSNVCRACFT
Trigger: AGTAAAGCATGCTCTACACACATTGCTTTTGCAAGCTCTGAGGCAGTGGGAAACATGTCCAAAGAACAAGGGAGCCGGAAACTGGTCTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000201700.4
3UTR GCA 90 bp AGGCGAAAGCACGTCCAGTTAGATTTGAGAGTATCGTTTATTCCGTaGAGAGCCAGGGACTACTGTGAAGAAAGGTATAGATACGGAAAG +
Preference number: 1 (lower is better)
Translates to: RRKHVQLDLRVSFIP*RARDYCEERYRYGK
Trigger: CTTTCCGTATCTATACCTTTCTTCACAGTAGTCCCTGGCTCTGCACGGAATAAACGATACTCTCAAATCTAACTGGACGTGCTTTCGCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000074733.11
3UTR GCA 90 bp CTTGCCATACTGTCTCTAACAGAACAGAGAACCCACGTGAACAACTaGGATTTTAAAGTGCTTTTACCAAGAGTCTCGAGAAAGCCTGCA +
Preference number: 1 (lower is better)
Translates to: LAILSLTEQRTHVNN*DFKVLLPRVSRKPA
Trigger: TGCAGGCTTTCTCGAGACTCTTGGTAAAAGCACTTTAAAATCGCAGTTGTTCACGTGGGTTCTCTGTTCTGTTAGAGACAGTATGGCAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000201700.4
3UTR GCA 90 bp ATTTCACAATACAATAATCCTCCAGAAAAACCAGCTCCCACTAGCTaGTGTTTGGAGTATAAAATCCAGCAGCTGGCTTGCCATACTGTC +
Preference number: 1 (lower is better)
Translates to: ISQYNNPPEKPAPTS*CLEYKIQQLACHTV
Trigger: GACAGTATGGCAAGCCAGCTGCTGGATTTTATACTCCAAACAGCAGCTAGTGGGAGCTGGTTTTTCTGGAGGATTATTGTATTGTGAAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000201700.4
3UTR CCA 90 bp AATACAATAATCCTCCAGAAAAACCAGCTCCCACTAGCTGCTGTTTaGAGTATAAAATCCAGCAGCTGGCTTGCCATACTGTCTCTAACA +
Preference number: 1 (lower is better)
Translates to: NTIILQKNQLPLAAV*SIKSSSWLAILSLT
Trigger: TGTTAGAGACAGTATGGCAAGCCAGCTGCTGGATTTTATACTCCAAACAGCAGCTAGTGGGAGCTGGTTTTTCTGGAGGATTATTGTATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000201700.4
3UTR TCA 90 bp CTCCATAATAAATGTCCTGTCAATAGAACTAAGACTTTTGGAACCTaGCAACTCCAGACACTTATGAATGGCAAAGCTGGGGGATTCAGA +
Preference number: 1 (lower is better)
Translates to: LHNKCPVNRTKTFGT*QLQTLMNGKAGGFR
Trigger: TCTGAATCCCCCAGCTTTGCCATTCATAAGTGTCTGGAGTTGTCAGGTTCCAAAAGTCTTAGTTCTATTGACAGGACATTTATTATGGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000074733.11
3UTR-3UTR TCA 90 bp ACGCCAGGATTAAGTGACCACAGCGCTGGGCTGGCTTGCCAGCTCTTAGTCTCAGGCGCAGGGGCGGCATaGGGGTTGCTAGGGTTGGGC +
Preference number: 2 (lower is better)
Translates to: TPGLSDHSAGLACQLLVSGAGAA*GLLGLG
Trigger: GCCCAACCCTAGCAACCCTCATGCCGCCCCTGCGCC...TGAGACTAAGAGCTGGCAAGCCAGCCCAGCGCTGTGGTCACTTAATCCTGGCGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000201700.4
3UTR-3UTR GCA 90 bp ACGCCAGGATTAAGTGACCACAGCGCTGGGCTGGCTTGCCAGCTCTTAGTCTCACAGCTGCTACTGGGGTaGCACAGGAAGGGACAACCG +
Preference number: 2 (lower is better)
Translates to: TPGLSDHSAGLACQLLVSQLLLG*HRKGQP
Trigger: CGGTTGTCCCTTCCTGTGGCACCCCAGTAGCAGCTG...TGAGACTAAGAGCTGGCAAGCCAGCCCAGCGCTGTGGTCACTTAATCCTGGCGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000201700.4
3UTR-3UTR TCA 90 bp CAGAGGCGGAGGCCTGGGTTCATGAGAAATGAGAGGGAAGAGCCAAGATCTGGTGGGTGGCCAAGCAGGTaGCAGGAGCGTCAGGGAAAA +
Preference number: 2 (lower is better)
Translates to: QRRRPGFMRNEREEPRSGGWPSR*QERQGK
Trigger: TTTTCCCTGACGCTCCTGTCACCTGCTTGGCCACCC...ACCAGATCTTGGCTCTTCCCTCTCATTTCTCATGAACCCAGGCCTCCGCCTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000074733.11
3UTR-3UTR TCA 90 bp TGGACAGTTCTGGGAGGACCACACAGAGACAGTACGATGTGGGTAGGGGACGCCTATCCCCTTCACCAGTaGAGATGGCTGTGGCTGCTC +
Preference number: 2 (lower is better)
Translates to: WTVLGGPHRDSTMWVGDAYPLHQ*RWLWLL
Trigger: GAGCAGCCACAGCCATCTTCACTGGTGAAGGGGATA...GGCGTCCCCTACCCACATCGTACTGTCTCTGTGTGGTCCTCCCAGAACTGTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000074733.11
3UTR-3UTR CCA 90 bp CAGCAAGGGTTGGCCCACTCTGATGACCTGCTGATAGCTGAGGATCCTGATGGGCTTCCCCAACTCGAGTaGACAGACAGCTCCCGCTCT +
Preference number: 2 (lower is better)
Translates to: QQGLAHSDDLLIAEDPDGLPQLE*TDSSRS
Trigger: AGAGCGGGAGCTGTCTGTCCACTCGAGTTGGGGAAG...CCCATCAGGATCCTCAGCTATCAGCAGGTCATCAGAGTGGGCCAACCCTTGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000201421.4
3UTR-3UTR TCA 90 bp AGAAGGCAGCAAGGGTTGGCCCACTCTGATGACCTGCTGATAGCTGAGGATCCTAGGCGATGGTGGAGATaGGGTAACTCTTCCCCAACT +
Preference number: 2 (lower is better)
Translates to: RRQQGLAHSDDLLIAEDPRRWWR*GNSSPT
Trigger: AGTTGGGGAAGAGTTACCTCATCTCCACCATCGCCT...AGGATCCTCAGCTATCAGCAGGTCATCAGAGTGGGCCAACCCTTGCTGCCTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000201421.4
3UTR-3UTR CCA 90 bp ACAAGCAGAGGACACCAGTGCTCAAGCTCTTACGTGGTGCCCGGTGAAGAAGCACTTCCTGCCGCCACTTaGAACAGGCATACAAGGCAA +
Preference number: 2 (lower is better)
Translates to: TSRGHQCSSSYVVPGEEALPAAT*NRHTRQ
Trigger: TTGCCTTGTATGCCTGTTCCAAGTGGCGGCAGGAAG...TGCTTCTTCACCGGGCACCACGTAAGAGCTTGAGCACTGGTGTCCTCTGCTTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000074733.11
3UTR CAA 90 bp TCCCACACCAGAAAAACCCACAAAACCAACAGAAGGCAGCAAGGGTaGGCCCACTCTGATGACCTGCTGATAGCTGAGGATCCTGATGGG +
Preference number: 2 (lower is better)
Translates to: SHTRKTHKTNRRQQG*AHSDDLLIAEDPDG
Trigger: CCCATCAGGATCCTCAGCTATCAGCAGGTCATCAGAGTGGGCCAACCCTTGCTGCCTTCTGTTGGTTTTGTGGGTTTTTCTGGTGTGGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000201421.4
3UTR-3UTR GCA 90 bp TGGACAGTTCTGGGAGGACCACACAGAGACAGTACGATGTGGGTAGGGGACGCCCTGTTGCTGGTGAGTTaGAAAGTAAAGGAGGACGAA +
Preference number: 2 (lower is better)
Translates to: WTVLGGPHRDSTMWVGDALLLVS*KVKEDE
Trigger: TTCGTCCTCCTTTACTTTGCAACTCACCAGCAACAG...GGCGTCCCCTACCCACATCGTACTGTCTCTGTGTGGTCCTCCCAGAACTGTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000074733.11
3UTR CAA 90 bp GTCCACCCATTCAAGGTGCACGGGATGGAGAGGAAGCAAGAGCTGTaGCTGGTGAGTTGCAAAGTAAAGGAGGACGAAAGCAAGAAACCC +
Preference number: 2 (lower is better)
Translates to: VHPFKVHGMERKQEL*LVSCKVKEDESKKP
Trigger: GGGTTTCTTGCTTTCGTCCTCCTTTACTTTGCAACTCACCAGCAACAGCTCTTGCTTCCTCTCCATCCCGTGCACCTTGAATGGGTGGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000074733.11
3UTR-3UTR TCA 90 bp CTGGCTGAGAGAGACCCTTCTGGATCGATTCATACAGAGCCCAAGCTGAGAAAACAAAGGCCCTCTACATaGCCTCCAGGAGGCCATACA +
Preference number: 2 (lower is better)
Translates to: LAERDPSGSIHTEPKLRKQRPST*PPGGHT
Trigger: TGTATGGCCTCCTGGAGGTCATGTAGAGGGCCTTTG...TTTTCTCAGCTTGGGCTCTGTATGAATCGATCCAGAAGGGTCTCTCTCAGCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000074733.11
3UTR-3UTR GCA 90 bp GAGAGTCAAGTCCACCCATTCAAGGTGCACGGGATGGAGAGGAAGCAAGAGCTGGATGCCATCCACTTGTaGTATGGTTTTCCACCACCT +
Preference number: 2 (lower is better)
Translates to: ESQVHPFKVHGMERKQELDAIHL*YGFPPP
Trigger: AGGTGGTGGAAAACCATAGCACAAGTGGATGGCATC...CAGCTCTTGCTTCCTCTCCATCCCGTGCACCTTGAATGGGTGGACTTGACTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000074733.11
3UTR-3UTR GCA 90 bp ATATGCATAGGTCACCTGGCACCACACTACGATAACAGACACCAAGTTACTCGGGACGTGAGAGGAAAATaGAGAGGCGGAGGCCTGGGT +
Preference number: 2 (lower is better)
Translates to: ICIGHLAPHYDNRHQVTRDVRGK*RGGGLG
Trigger: ACCCAGGCCTCCGCCTCTGCATTTTCCTCTCACGTC...CCGAGTAACTTGGTGTCTGTTATCGTAGTGTGGTGCCAGGTGACCTATGCATAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000074733.11
3UTR-3UTR GCA 90 bp ACGCCAGGATTAAGTGACCACAGCGCTGGGCTGGCTTGCCAGCTCTTAGTCTCAAGTCTCGAGAAAGCCTaGAGAGGCATTATGAGAACT +
Preference number: 2 (lower is better)
Translates to: TPGLSDHSAGLACQLLVSSLEKA*RGIMRT
Trigger: AGTTCTCATAATGCCTCTGCAGGCTTTCTCGAGACT...TGAGACTAAGAGCTGGCAAGCCAGCCCAGCGCTGTGGTCACTTAATCCTGGCGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000201700.4
3UTR-3UTR TCA 90 bp GCTAGAAAAATGGAAGCAAAGCCGATGTCTGTGTTGGAGCTATCCCCTTCACCAACTCAGGGTTTTAGCTaGGCTGCTGAGGCGGTGAGT +
Preference number: 2 (lower is better)
Translates to: ARKMEAKPMSVLELSPSPTQGFS*AAEAVS
Trigger: ACTCACCGCCTCAGCAGCTCAGCTAAAACCCTGAGT...TGGTGAAGGGGATAGCTCCAACACAGACATCGGCTTTGCTTCCATTTTTCTAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000074733.11
3UTR-3UTR GCA 90 bp TTTCCGGCTCCCTTGTTCTTTGGACATGTTTCCCACTGCCTCAGAGCTTGCAAAACGGGCACATTGCACTaGCTTAGGAGCAAGCCCAAT +
Preference number: 2 (lower is better)
Translates to: FPAPLFFGHVSHCLRACKTGTLH*LRSKPN
Trigger: ATTGGGCTTGCTCCTAAGGCAGTGCAATGTGCCCGT...TTTGCAAGCTCTGAGGCAGTGGGAAACATGTCCAAAGAACAAGGGAGCCGGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000201700.4
3UTR-3UTR CCA 90 bp GCTAGAAAAATGGAAGCAAAGCCGATGTCTGTGTTGGAGCTATCCCCTTCACCAGAGGCTGGAGGGAAGTaGGAATCCAGCCTCCTTAAC +
Preference number: 2 (lower is better)
Translates to: ARKMEAKPMSVLELSPSPEAGGK*ESSLLN
Trigger: GTTAAGGAGGCTGGATTCCCACTTCCCTCCAGCCTC...TGGTGAAGGGGATAGCTCCAACACAGACATCGGCTTTGCTTCCATTTTTCTAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000074733.11
3UTR-3UTR CCA 90 bp AGCGTCAGGGAAAAGATGACAGGACAAATGATGCACCCCTCTCAGTTCTTACACTGTGTGCAGAGAGGCTaGAGGGAAGTGGGAATCCAG +
Preference number: 2 (lower is better)
Translates to: SVREKMTGQMMHPSQFLHCVQRG*REVGIQ
Trigger: CTGGATTCCCACTTCCCTCCAGCCTCTCTGCACACA...GTGTAAGAACTGAGAGGGGTGCATCATTTGTCCTGTCATCTTTTCCCTGACGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000074733.11
3UTR-3UTR CCA 90 bp CCGTGCAGAGAGGCCAAAGCTGTCCAACCAAAAACTAAAAAGAAGTGGCCATTGAGCTCACACAAGCAGTaGCCGGAACAAGCAGAGGAC +
Preference number: 2 (lower is better)
Translates to: PCREAKAVQPKTKKKWPLSSHKQ*PEQAED
Trigger: GTCCTCTGCTTGTTCCGGCCACTGCTTGTGTGAGCT...CAATGGCCACTTCTTTTTAGTTTTTGGTTGGACAGCTTTGGCCTCTCTGCACGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000074733.11
3UTR-3UTR CCA 90 bp CTTAGACCAGTTTCCGGCTCCCTTGTTCTTTGGACATGTTTCCCACTGCCTCAGGAGCATCTAGCTCTTTaGCACTCGAAACCAAGGCTG +
Preference number: 2 (lower is better)
Translates to: LRPVSGSLVLWTCFPLPQEHLAL*HSKPRL
Trigger: CAGCCTTGGTTTCGAGTGCCAAAGAGCTAGATGCTC...CTGAGGCAGTGGGAAACATGTCCAAAGAACAAGGGAGCCGGAAACTGGTCTAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000201700.4
3UTR-3UTR GCA 90 bp ATATGCATAGGTCACCTGGCACCACACTACGATAACAGACACCAAGTTACTCGGGAGGGGAATGCAGCCTaGATTGTCCCATTCACGTGT +
Preference number: 2 (lower is better)
Translates to: ICIGHLAPHYDNRHQVTREGNAA*IVPFTC
Trigger: ACACGTGAATGGGACAATGCAGGCTGCATTCCCCTC...CCGAGTAACTTGGTGTCTGTTATCGTAGTGTGGTGCCAGGTGACCTATGCATAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000074733.11
3UTR-3UTR GCA 90 bp TTTCCGGCTCCCTTGTTCTTTGGACATGTTTCCCACTGCCTCAGAGCTTGCAAATTGTTGTTCCTTAGCTaGCAGCTTTTCACCCGGCAC +
Preference number: 2 (lower is better)
Translates to: FPAPLFFGHVSHCLRACKLLFLS*QLFTRH
Trigger: GTGCCGGGTGAAAAGCTGGCAGCTAAGGAACAACAA...TTTGCAAGCTCTGAGGCAGTGGGAAACATGTCCAAAGAACAAGGGAGCCGGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000201700.4
3UTR-3UTR CCA 90 bp CCGTGCAGAGAGGCCAAAGCTGTCCAACCAAAAACTAAAAAGAAGTGGCCATTGCTGTCAGCAAGGAAGTaGACCAGAGGCTGGCTATCA +
Preference number: 2 (lower is better)
Translates to: PCREAKAVQPKTKKKWPLLSARK*TRGWLS
Trigger: TGATAGCCAGCCTCTGGTCCACTTCCTTGCTGACAG...CAATGGCCACTTCTTTTTAGTTTTTGGTTGGACAGCTTTGGCCTCTCTGCACGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000074733.11
3UTR-3UTR GCA 90 bp ACGCCAGGATTAAGTGACCACAGCGCTGGGCTGGCTTGCCAGCTCTTAGTCTCAACCCACGTGAACAACTaGGATTTTAAAGTGCTTTTA +
Preference number: 2 (lower is better)
Translates to: TPGLSDHSAGLACQLLVSTHVNN*DFKVLL
Trigger: TAAAAGCACTTTAAAATCGCAGTTGTTCACGTGGGT...TGAGACTAAGAGCTGGCAAGCCAGCCCAGCGCTGTGGTCACTTAATCCTGGCGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000201700.4
3UTR-3UTR CCA 90 bp ACAAGCAGAGGACACCAGTGCTCAAGCTCTTACGTGGTGCCCGGTGAAGAAGCAAAATGCAAGTTGTCATaGCTACTCAGGGTTTTAGCT +
Preference number: 2 (lower is better)
Translates to: TSRGHQCSSSYVVPGEEAKCKLS*LLRVLA
Trigger: AGCTAAAACCCTGAGTAGCCATGACAACTTGCATTT...TGCTTCTTCACCGGGCACCACGTAAGAGCTTGAGCACTGGTGTCCTCTGCTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000074733.11
3UTR-3UTR CCA 90 bp AAGGTAGGCATTCAGATGCAGACTCCATCCCTAAGACAGTCTAACCAGATCATATTTCCAGCCCACCGCTaGCTTGTGGCAAGTGTGAAG +
Preference number: 2 (lower is better)
Translates to: KVGIQMQTPSLRQSNQIIFPAHR*LVASVK
Trigger: CTTCACACTTGCCACAAGCCAGCGGTGGGCTGGAAA...TATGATCTGGTTAGACTGTCTTAGGGATGGAGTCTGCATCTGAATGCCTACCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000074733.11
3UTR-3UTR CCA 90 bp AATGGCTTTCACTCTGGCTTGCCAGGTAGAGACGCCATTCTCAGTACTAGCTTTGGCTCCCTTGTTCTTTaGACATGTTTCCCACTGCCT +
Preference number: 2 (lower is better)
Translates to: NGFHSGLPGRDAILSTSFGSLVL*TCFPLP
Trigger: AGGCAGTGGGAAACATGTCCAAAGAACAAGGGAGCC...AAAGCTAGTACTGAGAATGGCGTCTCTACCTGGCAAGCCAGAGTGAAAGCCATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000201700.4
3UTR CAA 90 bp AGAGAGGCCAAAGCTGTCCAACCAAAAACTAAAAAGAAGTGGCCATaGTGCACTGAGCATAAAGGAGAAGCCACTAGCCTGAGATCCGGA +
Preference number: 2 (lower is better)
Translates to: REAKAVQPKTKKKWP*CTEHKGEATSLRSG
Trigger: TCCGGATCTCAGGCTAGTGGCTTCTCCTTTATGCTCAGTGCACAATGGCCACTTCTTTTTAGTTTTTGGTTGGACAGCTTTGGCCTCTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000074733.11
3UTR-3UTR TCA 90 bp GTGGGAATCTTTCCCCAGCTTTTTGCCACTGTCACAATCAAAGGCCCTCTACATTGGGTTCATGAGAAATaGGAGGGAAGAGCCAAGATC +
Preference number: 2 (lower is better)
Translates to: VGIFPQLFATVTIKGPLHWVHEK*EGRAKI
Trigger: GATCTTGGCTCTTCCCTCTCATTTCTCATGAACCCA...ATGTAGAGGGCCTTTGATTGTGACAGTGGCAAAAAGCTGGGGAAAGATTCCCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000074733.11
3UTR-3UTR GCA 90 bp AGGTTGCTGAGTCAGCACTTTCATACTTGTAGGAACAATAGGCTTCACGTCAATGAAGATGGCTGTGGCTaGTCTCCAGCCTGGTCTACA +
Preference number: 2 (lower is better)
Translates to: RLLSQHFHTCRNNRLHVNEDGCG*SPAWST
Trigger: TGTAGACCAGGCTGGAGAGCAGCCACAGCCATCTTC...ATTGACGTGAAGCCTATTGTTCCTACAAGTATGAAAGTGCTGACTCAGCAACCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000074733.11
3UTR-3UTR GCA 90 bp AGGATGAAGAACAAGAACCCTCAAGAGGGTTCCAGGGCTGCCCATATAGCTACACCAGCTCCCACTAGCTaGTGTTTGGAGTATAAAATC +
Preference number: 2 (lower is better)
Translates to: RMKNKNPQEGSRAAHIATPAPTS*CLEYKI
Trigger: GATTTTATACTCCAAACAGCAGCTAGTGGGAGCTGG...TGTAGCTATATGGGCAGCCCTGGAACCCTCTTGAGGGTTCTTGTTCTTCATCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000201700.4
3UTR-3UTR GCA 90 bp AAAAACCAGCTCCCACTAGCTGCTGTTTGGAGTATAAAATCCAGCAGCTGGCTTAAGCTCACAGGCCACTaGTATCCTGATTGTTTGGTC +
Preference number: 2 (lower is better)
Translates to: KNQLPLAAVWSIKSSSWLKLTGH*YPDCLV
Trigger: GACCAAACAATCAGGATAGCAGTGGCCTGTGAGCTT...AAGCCAGCTGCTGGATTTTATACTCCAAACAGCAGCTAGTGGGAGCTGGTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000201700.4
3UTR-3UTR CCA 90 bp AGGATGAAGAACAAGAACCCTCAAGAGGGTTCCAGGGCTGCCCATATAGCTACAATAAAATCCAGCAGCTaGCTTGCCATACTGTCTCTA +
Preference number: 2 (lower is better)
Translates to: RMKNKNPQEGSRAAHIATIKSSS*LAILSL
Trigger: TAGAGACAGTATGGCAAGCCAGCTGCTGGATTTTAT...TGTAGCTATATGGGCAGCCCTGGAACCCTCTTGAGGGTTCTTGTTCTTCATCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000201700.4
3UTR-3UTR CCA 90 bp GACATGTTTCCCACTGCCTCAGAGCTTGCAAAAGCAATGTGTGTAGAGCATGCTGAAACCAAGGCTGTATaGAAACCATTCTATGTGGGG +
Preference number: 2 (lower is better)
Translates to: DMFPTASELAKAMCVEHAETKAV*KPFYVG
Trigger: CCCCACATAGAATGGTTTCCATACAGCCTTGGTTTC...AGCATGCTCTACACACATTGCTTTTGCAAGCTCTGAGGCAGTGGGAAACATGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000201700.4
3UTR CAA 90 bp TACTCCTGTACTTACATGCAAAGGCGAAAGCACGTCCAGTTAGATTaGAGAGTATCGTTTATTCCGTGCAGAGCCAGGGACTACTGTGAA +
Preference number: 2 (lower is better)
Translates to: YSCTYMQRRKHVQLD*RVSFIPCRARDYCE
Trigger: TTCACAGTAGTCCCTGGCTCTGCACGGAATAAACGATACTCTCAAATCTAACTGGACGTGCTTTCGCCTTTGCATGTAAGTACAGGAGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000074733.11
3UTR-3UTR TCA 90 bp ATATGCATAGGTCACCTGGCACCACACTACGATAACAGACACCAAGTTACTCGGAGGGATGAGAGAAATTaGATGCAAAGGGGTGTTTTC +
Preference number: 2 (lower is better)
Translates to: ICIGHLAPHYDNRHQVTRRDERN*MQRGVF
Trigger: GAAAACACCCCTTTGCATTCAATTTCTCTCATCCCT...CCGAGTAACTTGGTGTCTGTTATCGTAGTGTGGTGCCAGGTGACCTATGCATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000074733.11
3UTR-3UTR GCA 90 bp AGGTTGCTGAGTCAGCACTTTCATACTTGTAGGAACAATAGGCTTCACGTCAATGTAATTCTGGAGGTGTaGAAGCACGGGATGCACAAC +
Preference number: 2 (lower is better)
Translates to: RLLSQHFHTCRNNRLHVNVILEV*KHGMHN
Trigger: GTTGTGCATCCCGTGCTTGCACACCTCCAGAATTAC...ATTGACGTGAAGCCTATTGTTCCTACAAGTATGAAAGTGCTGACTCAGCAACCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000074733.11
3UTR-3UTR CCA 90 bp CGTGCAGAGAGGCCAAAGCTGTCCAACCAAAAACTAAAAAGAAGTGGCCATTGTGGCCATACACAACAGTaGTACACAACATTCAGTACC +
Preference number: 2 (lower is better)
Translates to: RAERPKLSNQKLKRSGHCGHTQQ*YTTFST
Trigger: GGTACTGAATGTTGTGTACCACTGTTGTGTATGGCC...ACAATGGCCACTTCTTTTTAGTTTTTGGTTGGACAGCTTTGGCCTCTCTGCACG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000074733.11
3UTR CAA 90 bp CAATACAATAATCCTCCAGAAAAACCAGCTCCCACTAGCTGCTGTTaGGAGTATAAAATCCAGCAGCTGGCTTGCCATACTGTCTCTAAC +
Preference number: 2 (lower is better)
Translates to: QYNNPPEKPAPTSCC*EYKIQQLACHTVSN
Trigger: GTTAGAGACAGTATGGCAAGCCAGCTGCTGGATTTTATACTCCAAACAGCAGCTAGTGGGAGCTGGTTTTTCTGGAGGATTATTGTATTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000201700.4
3UTR-3UTR TCA 90 bp CTGGCTGAGAGAGACCCTTCTGGATCGATTCATACAGAGCCCAAGCTGAGAAAAAAACAAACGATTAAATaGAAAAGCCATAGGAGGGGA +
Preference number: 2 (lower is better)
Translates to: LAERDPSGSIHTEPKLRKKQTIK*KSHRRG
Trigger: TCCCCTCCTATGGCTTTTTCATTTAATCGTTTGTTT...TTTTCTCAGCTTGGGCTCTGTATGAATCGATCCAGAAGGGTCTCTCTCAGCCAG
44% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENSMUST00000074733.11
3UTR-3UTR GCA 90 bp AAGAGGAAGCATAAACTGTCGGGTAAAATAGAAATGTGGCCAGTATTTAGCTTTAAATGCAGGTGTGTGTaGAGAGAGGCTGGAGGGAAG +
Preference number: 2 (lower is better)
Translates to: KRKHKLSGKIEMWPVFSFKCRCV*REAGGK
Trigger: CTTCCCTCCAGCCTCTCTGCACACACACCTGCATTT...AAAGCTAAATACTGGCCACATTTCTATTTTACCCGACAGTTTATGCTTCCTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000074733.11
3UTR-3UTR GCA 90 bp ACTTACATGCAAAGGCGAAAGCACGTCCAGTTAGATTTGAGAGTATCGTTTATTTGTGACAGAGGGGAATaGAGCCTGCATTGTCCCATT +
Preference number: 2 (lower is better)
Translates to: TYMQRRKHVQLDLRVSFICDRGE*SLHCPI
Trigger: AATGGGACAATGCAGGCTGCATTCCCCTCTGTCACA...AATAAACGATACTCTCAAATCTAACTGGACGTGCTTTCGCCTTTGCATGTAAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000074733.11
3UTR-3UTR GCA 90 bp TTTCCGGCTCCCTTGTTCTTTGGACATGTTTCCCACTGCCTCAGAGCTTGCAAAAATGTGTGTAGAGCATaGTTTACTAGTCTTTCAATG +
Preference number: 2 (lower is better)
Translates to: FPAPLFFGHVSHCLRACKNVCRA*FTSLSM
Trigger: CATTGAAAGACTAGTAAAGCATGCTCTACACACATT...TTTGCAAGCTCTGAGGCAGTGGGAAACATGTCCAAAGAACAAGGGAGCCGGAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000201700.4
3UTR-3UTR CCA 90 bp CAATACAATAATCCTCCAGAAAAACCAGCTCCCACTAGCTGCTGTTTGGAGTATTTGCTTCTATTTTTCTaGCGATGGCCAGTTTCCAGT +
Preference number: 2 (lower is better)
Translates to: QYNNPPEKPAPTSCCLEYLLLFF*RWPVSS
Trigger: ACTGGAAACTGGCCATCGCCAGAAAAATAGAAGCAA...ATACTCCAAACAGCAGCTAGTGGGAGCTGGTTTTTCTGGAGGATTATTGTATTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000201700.4
3UTR-3UTR TCA 90 bp AAGAGGAAGCATAAACTGTCGGGTAAAATAGAAATGTGGCCAGTATTTAGCTTTTCTCATGGTGAGTCATaGAAACTTACTAGAAGTAGC +
Preference number: 2 (lower is better)
Translates to: KRKHKLSGKIEMWPVFSFSHGES*KLTRSS
Trigger: GCTACTTCTAGTAAGTTTTCATGACTCACCATGAGA...AAAGCTAAATACTGGCCACATTTCTATTTTACCCGACAGTTTATGCTTCCTCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000074733.11
3UTR TCA 72 bp CCCACACCTAACCTCAGGTGGAGGAGCTCCCCTGGCTaGGAGAGACCCTTCTGGATCGATTCATACAGAGCC +
Preference number: 3 (lower is better)
Translates to: PTPNLRWRSSPG*ERPFWIDSYRA
Trigger: GGCTCTGTATGAATCGATCCAGAAGGGTCTCTCTCAGCCAGGGGAGCTCCTCCACCTGAGGTTAGGTGTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000074733.11
3UTR CCA 72 bp AGCCAAGCAGTACCAAATGAGGTGTTCTTTGAGATCTaGACCCGTGAGAGTGTCCGGGACGCCCTGGTGGGG +
Preference number: 3 (lower is better)
Translates to: SQAVPNEVFFEI*TRESVRDALVG
Trigger: CCCCACCAGGGCGTCCCGGACACTCTCACGGGTCCAGATCTCAAAGAACACCTCATTTGGTACTGCTTGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000074733.11
3UTR CCA 72 bp GAAGGGCACTTTCCCACTAGTTCGGACAGCTGCTACTaGGGTGCCACAGGAAGGGACAACCGGAGAGCATCT +
Preference number: 3 (lower is better)
Translates to: EGHFPTSSDSCY*GATGRDNRRAS
Trigger: AGATGCTCTCCGGTTGTCCCTTCCTGTGGCACCCCAGTAGCAGCTGTCCGAACTAGTGGGAAAGTGCCCTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000201700.4
3UTR GCA 72 bp CAAGCAGAGGACACCAGTGCTCAAGCTCTTACGTGGTaGCCGGTGAAGAAGCAAACGCAGCGTCGGTTAGTC +
Preference number: 3 (lower is better)
Translates to: QAEDTSAQALTW*PVKKQTQRRLV
Trigger: GACTAACCGACGCTGCGTTTGCTTCTTCACCGGGCACCACGTAAGAGCTTGAGCACTGGTGTCCTCTGCTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000074733.11
3UTR TCA 72 bp GTGAGGGGACAGGGAGGACAACTCCTTAGAGGCAACTaGGTTACACTGTCAGCAAGGAAGTGGACCAGAGGC +
Preference number: 3 (lower is better)
Translates to: VRGQGGQLLRGN*VTLSARKWTRG
Trigger: GCCTCTGGTCCACTTCCTTGCTGACAGTGTAACTCAGTTGCCTCTAAGGAGTTGTCCTCCCTGTCCCCTCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000074733.11
3UTR TCA 72 bp AATGCAGCCTGCATTGTCCCATTCACGTGTAACTGGTaGCGTGAGAGGAAAATGCAGAGGCGGAGGCCTGGG +
Preference number: 3 (lower is better)
Translates to: NAACIVPFTCNW*RERKMQRRRPG
Trigger: CCCAGGCCTCCGCCTCTGCATTTTCCTCTCACGTCACCAGTTACACGTGAATGGGACAATGCAGGCTGCATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000074733.11
3UTR TCA 72 bp CACAGCACAGATGACAATTACAGGGGACCACAGTCCTaGAGGAGCAGAAGATGCTCACCGTGCAGAGAGGCC +
Preference number: 3 (lower is better)
Translates to: HSTDDNYRGPQS*RSRRCSPCREA
Trigger: GGCCTCTCTGCACGGTGAGCATCTTCTGCTCCTTCAGGACTGTGGTCCCCTGTAATTGTCATCTGTGCTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000074733.11
3UTR CCA 72 bp GAACAAGCAGAGGACACCAGTGCTCAAGCTCTTACGTaGTGCCCGGTGAAGAAGCAAACGCAGCGTCGGTTA +
Preference number: 3 (lower is better)
Translates to: EQAEDTSAQALT*CPVKKQTQRRL
Trigger: TAACCGACGCTGCGTTTGCTTCTTCACCGGGCACCACGTAAGAGCTTGAGCACTGGTGTCCTCTGCTTGTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000074733.11
3UTR CCA 72 bp GCATCTAGCTCTTTGGCACTCGAAACCAAGGCTGTATaGAAACCATTCTATGTGGGGCGCAGGGGCGGCATG +
Preference number: 3 (lower is better)
Translates to: ASSSLALETKAV*KPFYVGRRGGM
Trigger: CATGCCGCCCCTGCGCCCCACATAGAATGGTTTCCATACAGCCTTGGTTTCGAGTGCCAAAGAGCTAGATGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000201700.4
3UTR TCA 72 bp GCTGCACTGTCCATTCACTCCCCTGCCACCTTCAACTaGGGACGTCCTTTCAGACTTGTGCTACCGGTAGTA +
Preference number: 3 (lower is better)
Translates to: AALSIHSPATFN*GRPFRLVLPVV
Trigger: TACTACCGGTAGCACAAGTCTGAAAGGACGTCCTCAGTTGAAGGTGGCAGGGGAGTGAATGGACAGTGCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000074733.11
3UTR TCA 72 bp CTGACCAAGTACTCAGTCGTCCTCCCACAGCACAGATaGCAATTACAGGGGACCACAGTCCTGAAGGAGCAG +
Preference number: 3 (lower is better)
Translates to: LTKYSVVLPQHR*QLQGTTVLKEQ
Trigger: CTGCTCCTTCAGGACTGTGGTCCCCTGTAATTGTCATCTGTGCTGTGGGAGGACGACTGAGTACTTGGTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000074733.11
3UTR TCA 72 bp TGCCAGCTTTTCACCCGGCACCTTAACCTCCAAGGATaGAGAACAAGAACCCTCAAGAGGGTTCCAGGGCTG +
Preference number: 3 (lower is better)
Translates to: CQLFTRHLNLQG*RTRTLKRVPGL
Trigger: CAGCCCTGGAACCCTCTTGAGGGTTCTTGTTCTTCATCCTTGGAGGTTAAGGTGCCGGGTGAAAAGCTGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000201700.4
3UTR GCA 72 bp GCTTTGAGTAGCGGCTGCACTGTCCATTCACTCCCCTaGCACCTTCAACTGAGGACGTCCTTTCAGACTTGT +
Preference number: 3 (lower is better)
Translates to: ALSSGCTVHSLP*HLQLRTSFQTC
Trigger: ACAAGTCTGAAAGGACGTCCTCAGTTGAAGGTGGCAGGGGAGTGAATGGACAGTGCAGCCGCTACTCAAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000074733.11
3UTR TCA 72 bp AGCCAAGATCTGGTTAGAAGGGGGTGGCCAAGCAGGTaGCAGGAGCGTCAGGGAAAAGATGACAGGACAAAT +
Preference number: 3 (lower is better)
Translates to: SQDLVRRGWPSR*QERQGKDDRTN
Trigger: ATTTGTCCTGTCATCTTTTCCCTGACGCTCCTGTCACCTGCTTGGCCACCCCCTTCTAACCAGATCTTGGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000074733.11
3UTR GCA 72 bp GGTCCAAAGCGACATACAAGGGACAGACATGCTTCCTaGCGCCACTTGGAACAGGCATACAAGGCAAATCGA +
Preference number: 3 (lower is better)
Translates to: GPKRHTRDRHAS*RHLEQAYKANR
Trigger: TCGATTTGCCTTGTATGCCTGTTCCAAGTGGCGGCAGGAAGCATGTCTGTCCCTTGTATGTCGCTTTGGACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000074733.11
3UTR-3UTR CAA 90 bp CAGCTAGCTAGAAAAATGGAAGCAAAGCCGATGTCTGTGTTGGAGCTATCCCCTGCTTCCTGCCGCCACTaGGAACAGGCATACAAGGCA +
Preference number: 3 (lower is better)
Translates to: QLARKMEAKPMSVLELSPASCRH*EQAYKA
Trigger: TGCCTTGTATGCCTGTTCCAAGTGGCGGCAGGAAGC...AGGGGATAGCTCCAACACAGACATCGGCTTTGCTTCCATTTTTCTAGCTAGCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000074733.11
3UTR TCA 72 bp CATTGTGCACTGAGCATAAAGGAGAAGCCACTAGCCTaGGATCCGGAATGTCAGGGAGCAAGCAGAAAGGCA +
Preference number: 3 (lower is better)
Translates to: HCALSIKEKPLA*DPECQGASRKA
Trigger: TGCCTTTCTGCTTGCTCCCTGACATTCCGGATCTCAGGCTAGTGGCTTCTCCTTTATGCTCAGTGCACAATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000074733.11
3UTR TCA 72 bp ACCCAGACTTTAAAGAATGGGAGGCGATGGTGGAGATaGGGTAACTCTTCCCCAACTCGAGTGGACAGACAG +
Preference number: 3 (lower is better)
Translates to: TQTLKNGRRWWR*GNSSPTRVDRQ
Trigger: CTGTCTGTCCACTCGAGTTGGGGAAGAGTTACCTCATCTCCACCATCGCCTCCCATTCTTTAAAGTCTGGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000201421.4
3UTR GCA 72 bp AGTCTCGAGAAAGCCTGCAGAGGCATTATGAGAACTTaGCTGTCTTCTCGGCGTCTCCTGGTATTGCTACAG +
Preference number: 3 (lower is better)
Translates to: SLEKACRGIMRT*LSSRRLLVLLQ
Trigger: CTGTAGCAATACCAGGAGACGCCGAGAAGACAGGCAAGTTCTCATAATGCCTCTGCAGGCTTTCTCGAGACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000201700.4
3UTR CCA 72 bp CAGACACTTATGAATGGCAAAGCTGGGGGATTCAGATaGACAGTTCTGGGAGGACCACACAGAGACAGTACG +
Preference number: 3 (lower is better)
Translates to: QTLMNGKAGGFR*TVLGGPHRDST
Trigger: CGTACTGTCTCTGTGTGGTCCTCCCAGAACTGTCCATCTGAATCCCCCAGCTTTGCCATTCATAAGTGTCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000074733.11
3UTR CCA 72 bp CCACAGGAAGGGACAACCGGAGAGCATCTAGCTCTTTaGCACTCGAAACCAAGGCTGTATGGAAACCATTCT +
Preference number: 3 (lower is better)
Translates to: PQEGTTGEHLAL*HSKPRLYGNHS
Trigger: AGAATGGTTTCCATACAGCCTTGGTTTCGAGTGCCAAAGAGCTAGATGCTCTCCGGTTGTCCCTTCCTGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000201700.4
3UTR-3UTR CAA 90 bp CTTAGACCAGTTTCCGGCTCCCTTGTTCTTTGGACATGTTTCCCACTGCCTCAGCCCACTAGCTGCTGTTaGGAGTATAAAATCCAGCAG +
Preference number: 3 (lower is better)
Translates to: LRPVSGSLVLWTCFPLPQPTSCC*EYKIQQ
Trigger: CTGCTGGATTTTATACTCCAAACAGCAGCTAGTGGG...CTGAGGCAGTGGGAAACATGTCCAAAGAACAAGGGAGCCGGAAACTGGTCTAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000201700.4
3UTR GCA 72 bp GGGATGGAGAGGAAGCAAGAGCTGTTGCTGGTGAGTTaGAAAGTAAAGGAGGACGAAAGCAAGAAACCCACA +
Preference number: 3 (lower is better)
Translates to: GMERKQELLLVS*KVKEDESKKPT
Trigger: TGTGGGTTTCTTGCTTTCGTCCTCCTTTACTTTGCAACTCACCAGCAACAGCTCTTGCTTCCTCTCCATCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000074733.11
3UTR GCA 72 bp CGTCTCCTGGTATTGCTACAGAAGCTCACAGGCCACTaGTATCCTGATTGTTTGGTCACCATAGTGACGCAA +
Preference number: 3 (lower is better)
Translates to: RLLVLLQKLTGH*YPDCLVTIVTQ
Trigger: TTGCGTCACTATGGTGACCAAACAATCAGGATAGCAGTGGCCTGTGAGCTTCTGTAGCAATACCAGGAGACG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000201700.4
3UTR GCA 72 bp CTTGCCTCGGTCCTTTCATTATTGTTGTTCCTTAGCTaGCAGCTTTTCACCCGGCACCTTAACCTCCAAGGA +
Preference number: 3 (lower is better)
Translates to: LASVLSLLLFLS*QLFTRHLNLQG
Trigger: TCCTTGGAGGTTAAGGTGCCGGGTGAAAAGCTGGCAGCTAAGGAACAACAATAATGAAAGGACCGAGGCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000201700.4
3UTR CCA 72 bp GACATACAAGGGACAGACATGCTTCCTGCCGCCACTTaGAACAGGCATACAAGGCAAATCGACTTTCGAGAA +
Preference number: 3 (lower is better)
Translates to: DIQGTDMLPAAT*NRHTRQIDFRE
Trigger: TTCTCGAAAGTCGATTTGCCTTGTATGCCTGTTCCAAGTGGCGGCAGGAAGCATGTCTGTCCCTTGTATGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000074733.11
3UTR CCA 72 bp CTCACTCAAGTTTCTGCCTACTTTCCAGCCCACCGCTaGCTTGTGGCAAGTGTGAAGAAGAGACAGGTAATT +
Preference number: 3 (lower is better)
Translates to: LTQVSAYFPAHR*LVASVKKRQVI
Trigger: AATTACCTGTCTCTTCTTCACACTTGCCACAAGCCAGCGGTGGGCTGGAAAGTAGGCAGAAACTTGAGTGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000074733.11
3UTR CCA 72 bp AGCAGCAATAACCAGCTACCAGAGGCTCGGGAGCAGTaGGAGGAAAAAGTTGCAGAAGCAATGCTTTTCTCT +
Preference number: 3 (lower is better)
Translates to: SSNNQLPEAREQ*EEKVAEAMLFS
Trigger: AGAGAAAAGCATTGCTTCTGCAACTTTTTCCTCCCACTGCTCCCGAGCCTCTGGTAGCTGGTTATTGCTGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000074733.11
3UTR CCA 72 bp AACCTGACAACTCCAGACACTTATGAATGGCAAAGCTaGGGGATTCAGATGGACAGTTCTGGGAGGACCACA +
Preference number: 3 (lower is better)
Translates to: NLTTPDTYEWQS*GIQMDSSGRTT
Trigger: TGTGGTCCTCCCAGAACTGTCCATCTGAATCCCCCAGCTTTGCCATTCATAAGTGTCTGGAGTTGTCAGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000074733.11
3UTR-3UTR CAA 90 bp CAATACAATAATCCTCCAGAAAAACCAGCTCCCACTAGCTGCTGTTTGGAGTATCGGCGTCTCCTGGTATaGCTACAGAAGCTCACAGGC +
Preference number: 3 (lower is better)
Translates to: QYNNPPEKPAPTSCCLEYRRLLV*LQKLTG
Trigger: GCCTGTGAGCTTCTGTAGCAATACCAGGAGACGCCG...ATACTCCAAACAGCAGCTAGTGGGAGCTGGTTTTTCTGGAGGATTATTGTATTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000201700.4
3UTR TCA 72 bp CTACTGTCACAGCCCTGCCTCTGTAAGGTGACTCAATaGATAGCTCTAAACCACAGAAGTTCAAGGAAGGGC +
Preference number: 3 (lower is better)
Translates to: LLSQPCLCKVTQ*IALNHRSSRKG
Trigger: GCCCTTCCTTGAACTTCTGTGGTTTAGAGCTATTCATTGAGTCACCTTACAGAGGCAGGGCTGTGACAGTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000201700.4
3UTR GCA 72 bp GGAGGTGTGCAAGCACGGGATGCACAACTAAGAAAATaGAAGTTGTCATGGCTACTCAGGGTTTTAGCTGAG +
Preference number: 3 (lower is better)
Translates to: GGVQARDAQLRK*KLSWLLRVLAE
Trigger: CTCAGCTAAAACCCTGAGTAGCCATGACAACTTGCATTTTCTTAGTTGTGCATCCCGTGCTTGCACACCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000074733.11
3UTR GCA 72 bp TTTCCGGCTCCCTTGTTCTTTGGACATGTTTCCCACTaGCTCAGAGCTTGCAAAAGCAATGTGTGTAGAGCA +
Preference number: 3 (lower is better)
Translates to: FPAPLFFGHVSH*LRACKSNVCRA
Trigger: TGCTCTACACACATTGCTTTTGCAAGCTCTGAGGCAGTGGGAAACATGTCCAAAGAACAAGGGAGCCGGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000201700.4
3UTR CCA 72 bp ATCCTCCAGAAAAACCAGCTCCCACTAGCTGCTGTTTaGAGTATAAAATCCAGCAGCTGGCTTGCCATACTG +
Preference number: 3 (lower is better)
Translates to: ILQKNQLPLAAV*SIKSSSWLAIL
Trigger: CAGTATGGCAAGCCAGCTGCTGGATTTTATACTCCAAACAGCAGCTAGTGGGAGCTGGTTTTTCTGGAGGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000201700.4
3UTR-3UTR CAA 90 bp AGAAGGCAGCAAGGGTTGGCCCACTCTGATGACCTGCTGATAGCTGAGGATCCTAGGGGCACTTTAAAATaGCATCTAAGAGAAGAACAT +
Preference number: 3 (lower is better)
Translates to: RRQQGLAHSDDLLIAEDPRGTLK*HLREEH
Trigger: ATGTTCTTCTCTTAGATGCAATTTTAAAGTGCCCCT...AGGATCCTCAGCTATCAGCAGGTCATCAGAGTGGGCCAACCCTTGCTGCCTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000201421.4
3UTR-3UTR CAA 90 bp CCGTGCAGAGAGGCCAAAGCTGTCCAACCAAAAACTAAAAAGAAGTGGCCATTGTCTTTCCCCAGCTTTTaGCCACTGTCACAATCAAAG +
Preference number: 3 (lower is better)
Translates to: PCREAKAVQPKTKKKWPLSFPSF*PLSQSK
Trigger: CTTTGATTGTGACAGTGGCAAAAAGCTGGGGAAAGA...CAATGGCCACTTCTTTTTAGTTTTTGGTTGGACAGCTTTGGCCTCTCTGCACGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENSMUST00000074733.11
3UTR TCA 72 bp GGAAAGGCTGAAACAACGAATCAAACAGGACACAGATaGCAGAGGTACGCTACTACTGCCAAAGCAGGTGAA +
Preference number: 3 (lower is better)
Translates to: GKAETTNQTGHR*QRYATTAKAGE
Trigger: TTCACCTGCTTTGGCAGTAGTAGCGTACCTCTGTCATCTGTGTCCTGTTTGATTCGTTGTTTCAGCCTTTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000074733.11
3UTR GCA 72 bp AGCTGCTGTTTGGAGTATAAAATCCAGCAGCTGGCTTaGCATACTGTCTCTAACAGAACAGAGAACCCACGT +
Preference number: 3 (lower is better)
Translates to: SCCLEYKIQQLA*HTVSNRTENPR
Trigger: ACGTGGGTTCTCTGTTCTGTTAGAGACAGTATGGCAAGCCAGCTGCTGGATTTTATACTCCAAACAGCAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000201700.4
3UTR CCA 72 bp CCACTAGCTGCTGTTTGGAGTATAAAATCCAGCAGCTaGCTTGCCATACTGTCTCTAACAGAACAGAGAACC +
Preference number: 3 (lower is better)
Translates to: PLAAVWSIKSSS*LAILSLTEQRT
Trigger: GGTTCTCTGTTCTGTTAGAGACAGTATGGCAAGCCAGCTGCTGGATTTTATACTCCAAACAGCAGCTAGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000201700.4
3UTR CCA 72 bp TTATTGCTTAGACCAGTTTCCGGCTCCCTTGTTCTTTaGACATGTTTCCCACTGCCTCAGAGCTTGCAAAAG +
Preference number: 3 (lower is better)
Translates to: LLLRPVSGSLVL*TCFPLPQSLQK
Trigger: CTTTTGCAAGCTCTGAGGCAGTGGGAAACATGTCCAAAGAACAAGGGAGCCGGAAACTGGTCTAAGCAATAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000201700.4
3UTR-3UTR CAA 90 bp AATGGCTTTCACTCTGGCTTGCCAGGTAGAGACGCCATTCTCAGTACTAGCTTTGTCCTTTCATTATTGTaGTTCCTTAGCTGCCAGCTT +
Preference number: 3 (lower is better)
Translates to: NGFHSGLPGRDAILSTSFVLSLL*FLSCQL
Trigger: AAGCTGGCAGCTAAGGAACAACAATAATGAAAGGAC...AAAGCTAGTACTGAGAATGGCGTCTCTACCTGGCAAGCCAGAGTGAAAGCCATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000201700.4
3UTR GCA 72 bp GCTGTCCAACCAAAAACTAAAAAGAAGTGGCCATTGTaGACTGAGCATAAAGGAGAAGCCACTAGCCTGAGA +
Preference number: 3 (lower is better)
Translates to: AVQPKTKKKWPL*TEHKGEATSLR
Trigger: TCTCAGGCTAGTGGCTTCTCCTTTATGCTCAGTGCACAATGGCCACTTCTTTTTAGTTTTTGGTTGGACAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000074733.11
3UTR GCA 72 bp TACAATAATCCTCCAGAAAAACCAGCTCCCACTAGCTaGTGTTTGGAGTATAAAATCCAGCAGCTGGCTTGC +
Preference number: 3 (lower is better)
Translates to: YNNPPEKPAPTS*CLEYKIQQLAC
Trigger: GCAAGCCAGCTGCTGGATTTTATACTCCAAACAGCAGCTAGTGGGAGCTGGTTTTTCTGGAGGATTATTGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000201700.4
3UTR-3UTR CAA 90 bp AGGATGAAGAACAAGAACCCTCAAGAGGGTTCCAGGGCTGCCCATATAGCTACACTAAATGGTTGGGCATaGTGGTTGAATTTCACAATA +
Preference number: 3 (lower is better)
Translates to: RMKNKNPQEGSRAAHIATLNGWA*WLNFTI
Trigger: TATTGTGAAATTCAACCACAATGCCCAACCATTTAG...TGTAGCTATATGGGCAGCCCTGGAACCCTCTTGAGGGTTCTTGTTCTTCATCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000201700.4
3UTR GCA 72 bp CACGTCCAGTTAGATTTGAGAGTATCGTTTATTCCGTaGAGAGCCAGGGACTACTGTGAAGAAAGGTATAGA +
Preference number: 3 (lower is better)
Translates to: HVQLDLRVSFIP*RARDYCEERYR
Trigger: TCTATACCTTTCTTCACAGTAGTCCCTGGCTCTGCACGGAATAAACGATACTCTCAAATCTAACTGGACGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000074733.11
3UTR GCA 72 bp CTGTCTCTAACAGAACAGAGAACCCACGTGAACAACTaGGATTTTAAAGTGCTTTTACCAAGAGTCTCGAGA +
Preference number: 3 (lower is better)
Translates to: LSLTEQRTHVNN*DFKVLLPRVSR
Trigger: TCTCGAGACTCTTGGTAAAAGCACTTTAAAATCGCAGTTGTTCACGTGGGTTCTCTGTTCTGTTAGAGACAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000201700.4
3UTR GCA 72 bp TTGTTCTTTGGACATGTTTCCCACTGCCTCAGAGCTTaGAAAAGCAATGTGTGTAGAGCATGCTTTACTAGT +
Preference number: 3 (lower is better)
Translates to: LFFGHVSHCLRA*KSNVCRACFTS
Trigger: ACTAGTAAAGCATGCTCTACACACATTGCTTTTGCAAGCTCTGAGGCAGTGGGAAACATGTCCAAAGAACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000201700.4
3UTR-3UTR CAA 90 bp AGGTTGCTGAGTCAGCACTTTCATACTTGTAGGAACAATAGGCTTCACGTCAATCTAAGAAAATGCAAGTaGTCATGGCTACTCAGGGTT +
Preference number: 3 (lower is better)
Translates to: RLLSQHFHTCRNNRLHVNLRKCK*SWLLRV
Trigger: AACCCTGAGTAGCCATGACAACTTGCATTTTCTTAG...ATTGACGTGAAGCCTATTGTTCCTACAAGTATGAAAGTGCTGACTCAGCAACCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000074733.11
3UTR-3UTR CAA 90 bp CCCACTCTTTTCATTAATATAGCGTTACTATTTTTGGTAGTTGAAGTCACTTCGACAGCAGTGCAATATTaGACCCAGACTTTAAAGAAT +
Preference number: 3 (lower is better)
Translates to: PTLFINIALLFLVVEVTSTAVQY*TQTLKN
Trigger: ATTCTTTAAAGTCTGGGTCAAATATTGCACTGCTGT...CGAAGTGACTTCAACTACCAAAAATAGTAACGCTATATTAATGAAAAGAGTGGG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000201421.4
3UTR GCA 72 bp CAAGTGTCTAACATGCAGCTTACATACATGACAATCTaGATTAACACTGAAAGGTTACACAACAGTTTAGAA +
Preference number: 3 (lower is better)
Translates to: QVSNMQLTYMTI*INTERLHNSLE
Trigger: TTCTAAACTGTTGTGTAACCTTTCAGTGTTAATGCAGATTGTCATGTATGTAAGCTGCATGTTAGACACTTG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000074733.11
CDS-3UTR GCA 90 bp CGGACAGCTGCTACTGGGGTGCCACAGGAAGGGACAACCGGAGAGCATCTAGCTTTGTCCTTCTTGGTTTaGTGGGCCCCAGACTGCTGG +
Preference number: 4 (lower is better)
Translates to: RTAATGVPQEGTTGEHLALSFLV*WAPDCW
Trigger: CCAGCAGTCTGGGGCCCAGCAAACCAAGAAGGACAA...AGCTAGATGCTCTCCGGTTGTCCCTTCCTGTGGCACCCCAGTAGCAGCTGTCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000201700.4
CDS-3UTR CCA 90 bp CAGCAAGGGTTGGCCCACTCTGATGACCTGCTGATAGCTGAGGATCCTGATGGGTCCTTCTTGGTTTGCTaGGCCCCAGACTGCTGGGCC +
Preference number: 4 (lower is better)
Translates to: QQGLAHSDDLLIAEDPDGSFLVC*APDCWA
Trigger: GGCCCAGCAGTCTGGGGCCCAGCAAACCAAGAAGGA...CCCATCAGGATCCTCAGCTATCAGCAGGTCATCAGAGTGGGCCAACCCTTGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000201421.4
CDS-3UTR GCA 90 bp TCGGACAGCTGCTACTGGGGTGCCACAGGAAGGGACAACCGGAGAGCATCTAGCTTTTCGTTCTCAACCTaGACCACACCCCAAGGGTAC +
Preference number: 4 (lower is better)
Translates to: SDSCYWGATGRDNRRASSFSFST*TTPQGY
Trigger: GTACCCTTGGGGTGTGGTGCAGGTTGAGAACGAAAA...GCTAGATGCTCTCCGGTTGTCCCTTCCTGTGGCACCCCAGTAGCAGCTGTCCGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000201700.4
CDS-3UTR CCA 90 bp CGGACAGCTGCTACTGGGGTGCCACAGGAAGGGACAACCGGAGAGCATCTAGCTTATCCTTGTCCTTCTTaGTTTGCTGGGCCCCAGACT +
Preference number: 4 (lower is better)
Translates to: RTAATGVPQEGTTGEHLAYPCPS*FAGPQT
Trigger: AGTCTGGGGCCCAGCAAACCAAGAAGGACAAGGATA...AGCTAGATGCTCTCCGGTTGTCCCTTCCTGTGGCACCCCAGTAGCAGCTGTCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000201700.4
CDS-3UTR GCA 90 bp ACAAGCAGAGGACACCAGTGCTCAAGCTCTTACGTGGTGCCCGGTGAAGAAGCATTGTCCTTCTTGGTTTaGTGGGCCCCAGACTGCTGG +
Preference number: 4 (lower is better)
Translates to: TSRGHQCSSSYVVPGEEALSFLV*WAPDCW
Trigger: CCAGCAGTCTGGGGCCCAGCAAACCAAGAAGGACAA...TGCTTCTTCACCGGGCACCACGTAAGAGCTTGAGCACTGGTGTCCTCTGCTTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000074733.11
CDS-3UTR GCA 90 bp AGAAGGCAGCAAGGGTTGGCCCACTCTGATGACCTGCTGATAGCTGAGGATCCTTTGTCCTTCTTGGTTTaGTGGGCCCCAGACTGCTGG +
Preference number: 4 (lower is better)
Translates to: RRQQGLAHSDDLLIAEDPLSFLV*WAPDCW
Trigger: CCAGCAGTCTGGGGCCCAGCAAACCAAGAAGGACAA...AGGATCCTCAGCTATCAGCAGGTCATCAGAGTGGGCCAACCCTTGCTGCCTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000201421.4
CDS-3UTR CCA 90 bp CAGCAAGGGTTGGCCCACTCTGATGACCTGCTGATAGCTGAGGATCCTGATGGGGCCGCCTTCTTTTTCTaGAAGTTGCTCACCTCCTCC +
Preference number: 4 (lower is better)
Translates to: QQGLAHSDDLLIAEDPDGAAFFF*KLLTSS
Trigger: GGAGGAGGTGAGCAACTTCCAGAAAAAGAAGGCGGC...CCCATCAGGATCCTCAGCTATCAGCAGGTCATCAGAGTGGGCCAACCCTTGCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000201421.4
3UTR CAA 72 bp AGTCCAGCCACGCGCGCGCTTGCTGATGCCATCCACTaGTGCTATGGTTTTCCACCACCTGACAACATTCAG +
Preference number: 4 (lower is better)
Translates to: SPATRALADAIH*CYGFPPPDNIQ
Trigger: CTGAATGTTGTCAGGTGGTGGAAAACCATAGCACAAGTGGATGGCATCAGCAAGCGCGCGCGTGGCTGGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000074733.11
CDS-3UTR TCA 90 bp CACTTCTTTCTCTCAAGAGGCAGATGGTCAGATGCAAAGGCGAAAGCACGTCCACGGGGTCCGTGTCCTTaGAGCCCATCTCCTCAAGCT +
Preference number: 4 (lower is better)
Translates to: HFFLSRGRWSDAKAKARPRGPCP*SPSPQA
Trigger: AGCTTGAGGAGATGGGCTTCAAGGACACGGACCCCG...TGGACGTGCTTTCGCCTTTGCATCTGACCATCTGCCTCTTGAGAGAAAGAAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000202217.3
CDS-3UTR GCA 90 bp CGGACAGCTGCTACTGGGGTGCCACAGGAAGGGACAACCGGAGAGCATCTAGCTCCATCAATGTGGATTTaGCAATACCTGTCTCACCCA +
Preference number: 4 (lower is better)
Translates to: RTAATGVPQEGTTGEHLAPSMWI*QYLSHP
Trigger: TGGGTGAGACAGGTATTGGCAAATCCACATTGATGG...AGCTAGATGCTCTCCGGTTGTCCCTTCCTGTGGCACCCCAGTAGCAGCTGTCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000201700.4
CDS-3UTR GCA 90 bp CAGAGGCGGAGGCCTGGGTTCATGAGAAATGAGAGGGAAGAGCCAAGATCTGGTAGTACTGCCGACCACTaGGAATGGGAGATGGACACT +
Preference number: 4 (lower is better)
Translates to: QRRRPGFMRNEREEPRSGSTADH*EWEMDT
Trigger: AGTGTCCATCTCCCATTCGCAGTGGTCGGCAGTACT...ACCAGATCTTGGCTCTTCCCTCTCATTTCTCATGAACCCAGGCCTCCGCCTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000074733.11
CDS-3UTR GCA 90 bp ATAGATACGGAAAGAAAGAGCAGCAATAACCAGCTACCAGAGGCTCGGGAGCAGTGGCGAGTGTGCGTCTaGTCTCGCAGGTCCTCCATG +
Preference number: 4 (lower is better)
Translates to: IDTERKSSNNQLPEAREQWRVCV*SRRSSM
Trigger: CATGGAGGACCTGCGAGAGCAGACGCACACTCGCCA...CTGCTCCCGAGCCTCTGGTAGCTGGTTATTGCTGCTCTTTCTTTCCGTATCTAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000074733.11
CDS-3UTR GCA 90 bp TTTCCGGCTCCCTTGTTCTTTGGACATGTTTCCCACTGCCTCAGAGCTTGCAAATGGCGAGTGTGCGTCTaGTCTCGCAGGTCCTCCATG +
Preference number: 4 (lower is better)
Translates to: FPAPLFFGHVSHCLRACKWRVCV*SRRSSM
Trigger: CATGGAGGACCTGCGAGAGCAGACGCACACTCGCCA...TTTGCAAGCTCTGAGGCAGTGGGAAACATGTCCAAAGAACAAGGGAGCCGGAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000201700.4
CDS-3UTR GCA 90 bp ACTTCTTTCTCTCAAGAGGCAGATGGTCAGATGCAAAGGCGAAAGCACGTCCAGTGGCGAGTGTGCGTCTaGTCTCGCAGGTCCTCCATG +
Preference number: 4 (lower is better)
Translates to: TSFSQEADGQMQRRKHVQWRVCV*SRRSSM
Trigger: CATGGAGGACCTGCGAGAGCAGACGCACACTCGCCA...CTGGACGTGCTTTCGCCTTTGCATCTGACCATCTGCCTCTTGAGAGAAAGAAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000202217.3
CDS-3UTR GCA 90 bp ACGCCAGGATTAAGTGACCACAGCGCTGGGCTGGCTTGCCAGCTCTTAGTCTCAATGAAGCTCTTTTTCTaGCTCCTTGAGCTCCGCCTC +
Preference number: 4 (lower is better)
Translates to: TPGLSDHSAGLACQLLVSMKLFF*LLELRL
Trigger: GAGGCGGAGCTCAAGGAGGCAGAAAAAGAGCTTCAT...TGAGACTAAGAGCTGGCAAGCCAGCCCAGCGCTGTGGTCACTTAATCCTGGCGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000201700.4
CDS-3UTR CCA 90 bp ACGCCAGGATTAAGTGACCACAGCGCTGGGCTGGCTTGCCAGCTCTTAGTCTCAGGAGTTCATAGCTTCTaGCTTTTAACCGGACGCCTG +
Preference number: 4 (lower is better)
Translates to: TPGLSDHSAGLACQLLVSGVHSF*LLTGRL
Trigger: CAGGCGTCCGGTTAAAAGCCAGAAGCTATGAACTCC...TGAGACTAAGAGCTGGCAAGCCAGCCCAGCGCTGTGGTCACTTAATCCTGGCGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000201700.4
CDS-3UTR GCA 90 bp ACGCCAGGATTAAGTGACCACAGCGCTGGGCTGGCTTGCCAGCTCTTAGTCTCAGAACTCGTTCCTCTTTaGTTCGTAGGTCTCCTGAAG +
Preference number: 4 (lower is better)
Translates to: TPGLSDHSAGLACQLLVSELVPL*FVGLLK
Trigger: CTTCAGGAGACCTACGAAGCAAAGAGGAACGAGTTC...TGAGACTAAGAGCTGGCAAGCCAGCCCAGCGCTGTGGTCACTTAATCCTGGCGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000201700.4
CDS-3UTR GCA 90 bp AGAAGGCAGCAAGGGTTGGCCCACTCTGATGACCTGCTGATAGCTGAGGATCCTATGAAGCTCTTTTTCTaGCTCCTTGAGCTCCGCCTC +
Preference number: 4 (lower is better)
Translates to: RRQQGLAHSDDLLIAEDPMKLFF*LLELRL
Trigger: GAGGCGGAGCTCAAGGAGGCAGAAAAAGAGCTTCAT...AGGATCCTCAGCTATCAGCAGGTCATCAGAGTGGGCCAACCCTTGCTGCCTTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000201421.4
CDS-3UTR CCA 90 bp AGAGGCAGATGGTCAGATGCAAAGGCGAAAGCACGTCCAGTTAGATTTGAGAGTTCCTTCTTGGTTTGCTaGGCCCCAGACTGCTGGGCC +
Preference number: 4 (lower is better)
Translates to: RGRWSDAKAKARPVRFESSFLVC*APDCWA
Trigger: GGCCCAGCAGTCTGGGGCCCAGCAAACCAAGAAGGA...ACTCTCAAATCTAACTGGACGTGCTTTCGCCTTTGCATCTGACCATCTGCCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000202217.3
CDS-3UTR TCA 90 bp ACAAGCAGAGGACACCAGTGCTCAAGCTCTTACGTGGTGCCCGGTGAAGAAGCACCACGCACAGGATGTTaGAACAGAATCCTTGAGAAG +
Preference number: 4 (lower is better)
Translates to: TSRGHQCSSSYVVPGEEAPRTGC*NRILEK
Trigger: CTTCTCAAGGATTCTGTTTCAACATCCTGTGCGTGG...TGCTTCTTCACCGGGCACCACGTAAGAGCTTGAGCACTGGTGTCCTCTGCTTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000074733.11
CDS-3UTR TCA 90 bp ACAAGCAGAGGACACCAGTGCTCAAGCTCTTACGTGGTGCCCGGTGAAGAAGCATCTTGTTGCCAATCTTaGCCTCTTCAGTACTGCCGA +
Preference number: 4 (lower is better)
Translates to: TSRGHQCSSSYVVPGEEASCCQS*PLQYCR
Trigger: TCGGCAGTACTGAAGAGGTCAAGATTGGCAACAAGA...TGCTTCTTCACCGGGCACCACGTAAGAGCTTGAGCACTGGTGTCCTCTGCTTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000074733.11
CDS-3UTR GCA 90 bp CAGCAAGGGTTGGCCCACTCTGATGACCTGCTGATAGCTGAGGATCCTGATGGGCCATCAATGTGGATTTaGCAATACCTGTCTCACCCA +
Preference number: 4 (lower is better)
Translates to: QQGLAHSDDLLIAEDPDGPSMWI*QYLSHP
Trigger: TGGGTGAGACAGGTATTGGCAAATCCACATTGATGG...CCCATCAGGATCCTCAGCTATCAGCAGGTCATCAGAGTGGGCCAACCCTTGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000201421.4
CDS-3UTR GCA 90 bp ACGCCAGGATTAAGTGACCACAGCGCTGGGCTGGCTTGCCAGCTCTTAGTCTCACGTTGCGTTAATCTCTaGCACTGTTTCCTCATCTGT +
Preference number: 4 (lower is better)
Translates to: TPGLSDHSAGLACQLLVSRCVNL*HCFLIC
Trigger: ACAGATGAGGAAACAGTGGCAGAGATTAACGCAACG...TGAGACTAAGAGCTGGCAAGCCAGCCCAGCGCTGTGGTCACTTAATCCTGGCGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000201700.4
CDS-3UTR CCA 90 bp AAAAACCAGCTCCCACTAGCTGCTGTTTGGAGTATAAAATCCAGCAGCTGGCTTTCCTTCTTGGTTTGCTaGGCCCCAGACTGCTGGGCC +
Preference number: 4 (lower is better)
Translates to: KNQLPLAAVWSIKSSSWLSFLVC*APDCWA
Trigger: GGCCCAGCAGTCTGGGGCCCAGCAAACCAAGAAGGA...AAGCCAGCTGCTGGATTTTATACTCCAAACAGCAGCTAGTGGGAGCTGGTTTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000201700.4
CDS-3UTR TCA 90 bp AAGGTAGGCATTCAGATGCAGACTCCATCCCTAAGACAGTCTAACCAGATCATACGGGGTCCGTGTCCTTaGAGCCCATCTCCTCAAGCT +
Preference number: 4 (lower is better)
Translates to: KVGIQMQTPSLRQSNQIIRGPCP*SPSPQA
Trigger: AGCTTGAGGAGATGGGCTTCAAGGACACGGACCCCG...TATGATCTGGTTAGACTGTCTTAGGGATGGAGTCTGCATCTGAATGCCTACCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000074733.11
CDS-3UTR TCA 90 bp CCATTAAGAGAGAGTAGGGCTTGTCAACGGGATGGCTACATAAAGAAGAAGATGCGGGGTCCGTGTCCTTaGAGCCCATCTCCTCAAGCT +
Preference number: 4 (lower is better)
Translates to: PLRESRACQRDGYIKKKMRGPCP*SPSPQA
Trigger: AGCTTGAGGAGATGGGCTTCAAGGACACGGACCCCG...CATCTTCTTCTTTATGTAGCCATCCCGTTGACAAGCCCTACTCTCTCTTAATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000201421.4
CDS-3UTR GCA 90 bp TTCCTCGGTCCAAAGCGACATACAAGGGACAGACATGCTTCCTGCCGCCACTTGCGTTGCGTTAATCTCTaGCACTGTTTCCTCATCTGT +
Preference number: 4 (lower is better)
Translates to: FLGPKRHTRDRHASCRHLRCVNL*HCFLIC
Trigger: ACAGATGAGGAAACAGTGGCAGAGATTAACGCAACG...CAAGTGGCGGCAGGAAGCATGTCTGTCCCTTGTATGTCGCTTTGGACCGAGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000074733.11
CDS-3UTR GCA 90 bp AGAAGGCAGCAAGGGTTGGCCCACTCTGATGACCTGCTGATAGCTGAGGATCCTATGGACACTCATCGTTaGGTTAATCTCTGCCACTGT +
Preference number: 4 (lower is better)
Translates to: RRQQGLAHSDDLLIAEDPMDTHR*VNLCHC
Trigger: ACAGTGGCAGAGATTAACGCAACGATGAGTGTCCAT...AGGATCCTCAGCTATCAGCAGGTCATCAGAGTGGGCCAACCCTTGCTGCCTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000201421.4
CDS-3UTR GCA 90 bp CAGCAGCTGGCTTGCCATACTGTCTCTAACAGAACAGAGAACCCACGTGAACAAAGTACTGCCGACCACTaGGAATGGGAGATGGACACT +
Preference number: 4 (lower is better)
Translates to: QQLACHTVSNRTENPREQSTADH*EWEMDT
Trigger: AGTGTCCATCTCCCATTCGCAGTGGTCGGCAGTACT...TTGTTCACGTGGGTTCTCTGTTCTGTTAGAGACAGTATGGCAAGCCAGCTGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000201700.4
CDS-3UTR GCA 90 bp CCATTAAGAGAGAGTAGGGCTTGTCAACGGGATGGCTACATAAAGAAGAAGATGTGGCGAGTGTGCGTCTaGTCTCGCAGGTCCTCCATG +
Preference number: 4 (lower is better)
Translates to: PLRESRACQRDGYIKKKMWRVCV*SRRSSM
Trigger: CATGGAGGACCTGCGAGAGCAGACGCACACTCGCCA...CATCTTCTTCTTTATGTAGCCATCCCGTTGACAAGCCCTACTCTCTCTTAATGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000201421.4
CDS-3UTR GCA 90 bp CAGAGGCGGAGGCCTGGGTTCATGAGAAATGAGAGGGAAGAGCCAAGATCTGGTTCTTTTTCTGGAAGTTaGTCACCTCCTCCTCAAGCT +
Preference number: 4 (lower is better)
Translates to: QRRRPGFMRNEREEPRSGSFSGS*SPPPQA
Trigger: AGCTTGAGGAGGAGGTGAGCAACTTCCAGAAAAAGA...ACCAGATCTTGGCTCTTCCCTCTCATTTCTCATGAACCCAGGCCTCCGCCTCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000074733.11
CDS-3UTR GCA 90 bp GGCAGATGGTCAGATGCAAAGGCGAAAGCACGTCCAGTTAGATTTGAGAGTATCTTGTCCTTCTTGGTTTaGTGGGCCCCAGACTGCTGG +
Preference number: 4 (lower is better)
Translates to: GRWSDAKAKARPVRFESILSFLV*WAPDCW
Trigger: CCAGCAGTCTGGGGCCCAGCAAACCAAGAAGGACAA...GATACTCTCAAATCTAACTGGACGTGCTTTCGCCTTTGCATCTGACCATCTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000202217.3
CDS-3UTR CCA 90 bp CCTGCCGCCACTTGGAACAGGCATACAAGGCAAATCGACTTTCGAGAAACAAAGGCCGCCTTCTTTTTCTaGAAGTTGCTCACCTCCTCC +
Preference number: 4 (lower is better)
Translates to: PAATWNRHTRQIDFRETKAAFFF*KLLTSS
Trigger: GGAGGAGGTGAGCAACTTCCAGAAAAAGAAGGCGGC...CTTTGTTTCTCGAAAGTCGATTTGCCTTGTATGCCTGTTCCAAGTGGCGGCAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000074733.11
CDS-3UTR CCA 90 bp ACTTCTTTCTCTCAAGAGGCAGATGGTCAGATGCAAAGGCGAAAGCACGTCCAGGCCGCCTTCTTTTTCTaGAAGTTGCTCACCTCCTCC +
Preference number: 4 (lower is better)
Translates to: TSFSQEADGQMQRRKHVQAAFFF*KLLTSS
Trigger: GGAGGAGGTGAGCAACTTCCAGAAAAAGAAGGCGGC...CTGGACGTGCTTTCGCCTTTGCATCTGACCATCTGCCTCTTGAGAGAAAGAAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000202217.3
CDS-3UTR CCA 90 bp GCCCACTTCTTTCTCTCAAGAGGCAGATGGTCAGATGCAAAGGCGAAAGCACGTTATCCTTGTCCTTCTTaGTTTGCTGGGCCCCAGACT +
Preference number: 4 (lower is better)
Translates to: AHFFLSRGRWSDAKAKARYPCPS*FAGPQT
Trigger: AGTCTGGGGCCCAGCAAACCAAGAAGGACAAGGATA...ACGTGCTTTCGCCTTTGCATCTGACCATCTGCCTCTTGAGAGAAAGAAGTGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000202217.3
3UTR CAA 72 bp CGGGATGGAGAGGAAGCAAGAGCTGTTGCTGGTGAGTaGCAAAGTAAAGGAGGACGAAAGCAAGAAACCCAC +
Preference number: 4 (lower is better)
Translates to: RDGEEARAVAGE*QSKGGRKQETH
Trigger: GTGGGTTTCTTGCTTTCGTCCTCCTTTACTTTGCAACTCACCAGCAACAGCTCTTGCTTCCTCTCCATCCCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000074733.11
3UTR CAA 72 bp TTCAAGGTGCACGGGATGGAGAGGAAGCAAGAGCTGTaGCTGGTGAGTTGCAAAGTAAAGGAGGACGAAAGC +
Preference number: 4 (lower is better)
Translates to: FKVHGMERKQEL*LVSCKVKEDES
Trigger: GCTTTCGTCCTCCTTTACTTTGCAACTCACCAGCAACAGCTCTTGCTTCCTCTCCATCCCGTGCACCTTGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000074733.11
CDS-3UTR TCA 90 bp CAATACAATAATCCTCCAGAAAAACCAGCTCCCACTAGCTGCTGTTTGGAGTATCGGGGTCCGTGTCCTTaGAGCCCATCTCCTCAAGCT +
Preference number: 4 (lower is better)
Translates to: QYNNPPEKPAPTSCCLEYRGPCP*SPSPQA
Trigger: AGCTTGAGGAGATGGGCTTCAAGGACACGGACCCCG...ATACTCCAAACAGCAGCTAGTGGGAGCTGGTTTTTCTGGAGGATTATTGTATTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000201700.4
CDS-3UTR TCA 90 bp ATATGCATAGGTCACCTGGCACCACACTACGATAACAGACACCAAGTTACTCGGCTTTTTCTGCCTCCTTaGGCTCCGCCTCTTTCTCCT +
Preference number: 4 (lower is better)
Translates to: ICIGHLAPHYDNRHQVTRLFLPP*APPLSP
Trigger: AGGAGAAAGAGGCGGAGCTCAAGGAGGCAGAAAAAG...CCGAGTAACTTGGTGTCTGTTATCGTAGTGTGGTGCCAGGTGACCTATGCATAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000074733.11
CDS-3UTR TCA 90 bp GCAGATGGTCAGATGCAAAGGCGAAAGCACGTCCAGTTAGATTTGAGAGTATCGCTTTTTCTGCCTCCTTaGGCTCCGCCTCTTTCTCCT +
Preference number: 4 (lower is better)
Translates to: ADGQMQRRKHVQLDLRVSLFLPP*APPLSP
Trigger: AGGAGAAAGAGGCGGAGCTCAAGGAGGCAGAAAAAG...CGATACTCTCAAATCTAACTGGACGTGCTTTCGCCTTTGCATCTGACCATCTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000202217.3
CDS-3UTR GCA 90 bp AGAGGCAGATGGTCAGATGCAAAGGCGAAAGCACGTCCAGTTAGATTTGAGAGTAGTACTGCCGACCACTaGGAATGGGAGATGGACACT +
Preference number: 4 (lower is better)
Translates to: RGRWSDAKAKARPVRFESSTADH*EWEMDT
Trigger: AGTGTCCATCTCCCATTCGCAGTGGTCGGCAGTACT...ACTCTCAAATCTAACTGGACGTGCTTTCGCCTTTGCATCTGACCATCTGCCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000202217.3
CDS-3UTR GCA 90 bp TGGAACAGGCATACAAGGCAAATCGACTTTCGAGAAACAAAGTCCAGCCACGCGTTTTCGTTCTCAACCTaGACCACACCCCAAGGGTAC +
Preference number: 4 (lower is better)
Translates to: WNRHTRQIDFRETKSSHAFSFST*TTPQGY
Trigger: GTACCCTTGGGGTGTGGTGCAGGTTGAGAACGAAAA...CGCGTGGCTGGACTTTGTTTCTCGAAAGTCGATTTGCCTTGTATGCCTGTTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000074733.11
CDS-3UTR GCA 90 bp CACTTCTTTCTCTCAAGAGGCAGATGGTCAGATGCAAAGGCGAAAGCACGTCCATTTTCGTTCTCAACCTaGACCACACCCCAAGGGTAC +
Preference number: 4 (lower is better)
Translates to: HFFLSRGRWSDAKAKARPFSFST*TTPQGY
Trigger: GTACCCTTGGGGTGTGGTGCAGGTTGAGAACGAAAA...TGGACGTGCTTTCGCCTTTGCATCTGACCATCTGCCTCTTGAGAGAAAGAAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000202217.3
CDS-3UTR CCA 90 bp GAGAGTCAAGTCCACCCATTCAAGGTGCACGGGATGGAGAGGAAGCAAGAGCTGCTCGTTGTGAGTAGCTaGGTCACTTTCAAATTTGGT +
Preference number: 4 (lower is better)
Translates to: ESQVHPFKVHGMERKQELLVVSS*VTFKFG
Trigger: ACCAAATTTGAAAGTGACCCAGCTACTCACAACGAG...CAGCTCTTGCTTCCTCTCCATCCCGTGCACCTTGAATGGGTGGACTTGACTCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000074733.11
CDS-3UTR CCA 90 bp CACTTCTTTCTCTCAAGAGGCAGATGGTCAGATGCAAAGGCGAAAGCACGTCCAGGAGTTCATAGCTTCTaGCTTTTAACCGGACGCCTG +
Preference number: 4 (lower is better)
Translates to: HFFLSRGRWSDAKAKARPGVHSF*LLTGRL
Trigger: CAGGCGTCCGGTTAAAAGCCAGAAGCTATGAACTCC...TGGACGTGCTTTCGCCTTTGCATCTGACCATCTGCCTCTTGAGAGAAAGAAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000202217.3
CDS-3UTR CCA 90 bp TGGCTTGCCATACTGTCTCTAACAGAACAGAGAACCCACGTGAACAACTGCGATGCCGCCTTCTTTTTCTaGAAGTTGCTCACCTCCTCC +
Preference number: 4 (lower is better)
Translates to: WLAILSLTEQRTHVNNCDAAFFF*KLLTSS
Trigger: GGAGGAGGTGAGCAACTTCCAGAAAAAGAAGGCGGC...ATCGCAGTTGTTCACGTGGGTTCTCTGTTCTGTTAGAGACAGTATGGCAAGCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000201700.4
3UTR CAA 72 bp AGAAAAACCCACAAAACCAACAGAAGGCAGCAAGGGTaGGCCCACTCTGATGACCTGCTGATAGCTGAGGAT +
Preference number: 4 (lower is better)
Translates to: RKTHKTNRRQQG*AHSDDLLIAED
Trigger: ATCCTCAGCTATCAGCAGGTCATCAGAGTGGGCCAACCCTTGCTGCCTTCTGTTGGTTTTGTGGGTTTTTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000201421.4
3UTR CAA 72 bp GGAGATTCCTTGCTTGCCTCGGTCCTTTCATTATTGTaGTTCCTTAGCTGCCAGCTTTTCACCCGGCACCTT +
Preference number: 4 (lower is better)
Translates to: GDSLLASVLSLL*FLSCQLFTRHL
Trigger: AAGGTGCCGGGTGAAAAGCTGGCAGCTAAGGAACAACAATAATGAAAGGACCGAGGCAAGCAAGGAATCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000201700.4
CDS-3UTR TCA 90 bp TTTCCGGCTCCCTTGTTCTTTGGACATGTTTCCCACTGCCTCAGAGCTTGCAAACCACGCACAGGATGTTaGAACAGAATCCTTGAGAAG +
Preference number: 4 (lower is better)
Translates to: FPAPLFFGHVSHCLRACKPRTGC*NRILEK
Trigger: CTTCTCAAGGATTCTGTTTCAACATCCTGTGCGTGG...TTTGCAAGCTCTGAGGCAGTGGGAAACATGTCCAAAGAACAAGGGAGCCGGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000201700.4
CDS-3UTR TCA 90 bp AAGGTAGGCATTCAGATGCAGACTCCATCCCTAAGACAGTCTAACCAGATCATAACGCCTGGCTCGTTGTaGGTAGCTGGGTCACTTTCA +
Preference number: 4 (lower is better)
Translates to: KVGIQMQTPSLRQSNQIITPGSL*VAGSLS
Trigger: TGAAAGTGACCCAGCTACTCACAACGAGCCAGGCGT...TATGATCTGGTTAGACTGTCTTAGGGATGGAGTCTGCATCTGAATGCCTACCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000074733.11
CDS-3UTR TCA 90 bp AGAGAGAGTAGGGCTTGTCAACGGGATGGCTACATAAAGAAGAAGATGCAAAGGCTTTTTCTGCCTCCTTaGGCTCCGCCTCTTTCTCCT +
Preference number: 4 (lower is better)
Translates to: RESRACQRDGYIKKKMQRLFLPP*APPLSP
Trigger: AGGAGAAAGAGGCGGAGCTCAAGGAGGCAGAAAAAG...CCTTTGCATCTTCTTCTTTATGTAGCCATCCCGTTGACAAGCCCTACTCTCTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000201421.4
CDS-3UTR TCA 90 bp AAAAACCAGCTCCCACTAGCTGCTGTTTGGAGTATAAAATCCAGCAGCTGGCTTCTTTTTCTGCCTCCTTaGGCTCCGCCTCTTTCTCCT +
Preference number: 4 (lower is better)
Translates to: KNQLPLAAVWSIKSSSWLLFLPP*APPLSP
Trigger: AGGAGAAAGAGGCGGAGCTCAAGGAGGCAGAAAAAG...AAGCCAGCTGCTGGATTTTATACTCCAAACAGCAGCTAGTGGGAGCTGGTTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000201700.4
CDS-3UTR TCA 90 bp CCTGCCGCCACTTGGAACAGGCATACAAGGCAAATCGACTTTCGAGAAACAAAGAGGTCGAACTTCTCATaGAGCTCTTTTTCTGCCTCC +
Preference number: 4 (lower is better)
Translates to: PAATWNRHTRQIDFRETKRSNFS*SSFSAS
Trigger: GGAGGCAGAAAAAGAGCTTCATGAGAAGTTCGACCT...CTTTGTTTCTCGAAAGTCGATTTGCCTTGTATGCCTGTTCCAAGTGGCGGCAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000074733.11
CDS-3UTR TCA 90 bp ACTTCTTTCTCTCAAGAGGCAGATGGTCAGATGCAAAGGCGAAAGCACGTCCAGAGGTCGAACTTCTCATaGAGCTCTTTTTCTGCCTCC +
Preference number: 4 (lower is better)
Translates to: TSFSQEADGQMQRRKHVQRSNFS*SSFSAS
Trigger: GGAGGCAGAAAAAGAGCTTCATGAGAAGTTCGACCT...CTGGACGTGCTTTCGCCTTTGCATCTGACCATCTGCCTCTTGAGAGAAAGAAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000202217.3
CDS-3UTR GCA 90 bp ACTGAGCATAAAGGAGAAGCCACTAGCCTGAGATCCGGAATGTCAGGGAGCAAGCCATCAATGTGGATTTaGCAATACCTGTCTCACCCA +
Preference number: 4 (lower is better)
Translates to: TEHKGEATSLRSGMSGSKPSMWI*QYLSHP
Trigger: TGGGTGAGACAGGTATTGGCAAATCCACATTGATGG...CTTGCTCCCTGACATTCCGGATCTCAGGCTAGTGGCTTCTCCTTTATGCTCAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000074733.11
CDS-3UTR GCA 90 bp TGGACAGTTCTGGGAGGACCACACAGAGACAGTACGATGTGGGTAGGGGACGCCTTACTCTTGAATTTGTaGAATTCGTTTTTGGCGATG +
Preference number: 4 (lower is better)
Translates to: WTVLGGPHRDSTMWVGDALLLNL*NSFLAM
Trigger: CATCGCCAAAAACGAATTGCACAAATTCAAGAGTAA...GGCGTCCCCTACCCACATCGTACTGTCTCTGTGTGGTCCTCCCAGAACTGTCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000074733.11
CDS-3UTR GCA 90 bp GCCCACTTCTTTCTCTCAAGAGGCAGATGGTCAGATGCAAAGGCGAAAGCACGTCGTTGCGTTAATCTCTaGCACTGTTTCCTCATCTGT +
Preference number: 4 (lower is better)
Translates to: AHFFLSRGRWSDAKAKARRCVNL*HCFLIC
Trigger: ACAGATGAGGAAACAGTGGCAGAGATTAACGCAACG...ACGTGCTTTCGCCTTTGCATCTGACCATCTGCCTCTTGAGAGAAAGAAGTGGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000202217.3
CDS-3UTR GCA 90 bp CCACTTCTTTCTCTCAAGAGGCAGATGGTCAGATGCAAAGGCGAAAGCACGTCCATGGACACTCATCGTTaGGTTAATCTCTGCCACTGT +
Preference number: 4 (lower is better)
Translates to: PLLSLKRQMVRCKGESTSMDTHR*VNLCHC
Trigger: ACAGTGGCAGAGATTAACGCAACGATGAGTGTCCAT...GGACGTGCTTTCGCCTTTGCATCTGACCATCTGCCTCTTGAGAGAAAGAAGTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000202217.3
CDS-3UTR GCA 90 bp TGGAACAGGCATACAAGGCAAATCGACTTTCGAGAAACAAAGTCCAGCCACGCGGAACTCGTTCCTCTTTaGTTCGTAGGTCTCCTGAAG +
Preference number: 4 (lower is better)
Translates to: WNRHTRQIDFRETKSSHAELVPL*FVGLLK
Trigger: CTTCAGGAGACCTACGAAGCAAAGAGGAACGAGTTC...CGCGTGGCTGGACTTTGTTTCTCGAAAGTCGATTTGCCTTGTATGCCTGTTCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000074733.11
CDS-3UTR GCA 90 bp GTGGGAATCTTTCCCCAGCTTTTTGCCACTGTCACAATCAAAGGCCCTCTACATATGAAGCTCTTTTTCTaGCTCCTTGAGCTCCGCCTC +
Preference number: 4 (lower is better)
Translates to: VGIFPQLFATVTIKGPLHMKLFF*LLELRL
Trigger: GAGGCGGAGCTCAAGGAGGCAGAAAAAGAGCTTCAT...ATGTAGAGGGCCTTTGATTGTGACAGTGGCAAAAAGCTGGGGAAAGATTCCCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000074733.11
CDS-3UTR GCA 90 bp GGCAGATGGTCAGATGCAAAGGCGAAAGCACGTCCAGTTAGATTTGAGAGTATCATGAAGCTCTTTTTCTaGCTCCTTGAGCTCCGCCTC +
Preference number: 4 (lower is better)
Translates to: GRWSDAKAKARPVRFESIMKLFF*LLELRL
Trigger: GAGGCGGAGCTCAAGGAGGCAGAAAAAGAGCTTCAT...GATACTCTCAAATCTAACTGGACGTGCTTTCGCCTTTGCATCTGACCATCTGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000202217.3
CDS-3UTR GCA 90 bp CACAAAACCAACAGAAGGCAGCAAGGGTTGGCCCACTCTGATGACCTGCTGATATCTTTTTCTGGAAGTTaGTCACCTCCTCCTCAAGCT +
Preference number: 4 (lower is better)
Translates to: HKTNRRQQGLAHSDDLLISFSGS*SPPPQA
Trigger: AGCTTGAGGAGGAGGTGAGCAACTTCCAGAAAAAGA...TATCAGCAGGTCATCAGAGTGGGCCAACCCTTGCTGCCTTCTGTTGGTTTTGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000201421.4
CDS-3UTR CCA 90 bp AACGAATCAAACAGGACACAGATGACAGAGGTACGCTACTACTGCCAAAGCAGGTATCCTTGTCCTTCTTaGTTTGCTGGGCCCCAGACT +
Preference number: 4 (lower is better)
Translates to: NESNRTQMTEVRYYCQSRYPCPS*FAGPQT
Trigger: AGTCTGGGGCCCAGCAAACCAAGAAGGACAAGGATA...CCTGCTTTGGCAGTAGTAGCGTACCTCTGTCATCTGTGTCCTGTTTGATTCGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000074733.11
3UTR CAA 72 bp GTGCAAGCACGGGATGCACAACTAAGAAAATGCAAGTaGTCATGGCTACTCAGGGTTTTAGCTGAGCTGCTG +
Preference number: 4 (lower is better)
Translates to: VQARDAQLRKCK*SWLLRVLAELL
Trigger: CAGCAGCTCAGCTAAAACCCTGAGTAGCCATGACAACTTGCATTTTCTTAGTTGTGCATCCCGTGCTTGCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000074733.11
3UTR CAA 72 bp CTAGCTAGAAAAATGGAAGCAAAGCCGATGTCTGTGTaGGAGCTATCCCCTTCACCAGTGAAGATGGCTGTG +
Preference number: 4 (lower is better)
Translates to: LARKMEAKPMSV*ELSPSPVKMAV
Trigger: CACAGCCATCTTCACTGGTGAAGGGGATAGCTCCAACACAGACATCGGCTTTGCTTCCATTTTTCTAGCTAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000074733.11
3UTR CAA 72 bp AAAGGAGATTCCTTGCTTGCCTCGGTCCTTTCATTATaGTTGTTCCTTAGCTGCCAGCTTTTCACCCGGCAC +
Preference number: 4 (lower is better)
Translates to: KGDSLLASVLSL*LFLSCQLFTRH
Trigger: GTGCCGGGTGAAAAGCTGGCAGCTAAGGAACAACAATAATGAAAGGACCGAGGCAAGCAAGGAATCTCCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000201700.4
CDS-3UTR TCA 90 bp GCAGATGGTCAGATGCAAAGGCGAAAGCACGTCCAGTTAGATTTGAGAGTATCGCCACGCACAGGATGTTaGAACAGAATCCTTGAGAAG +
Preference number: 4 (lower is better)
Translates to: ADGQMQRRKHVQLDLRVSPRTGC*NRILEK
Trigger: CTTCTCAAGGATTCTGTTTCAACATCCTGTGCGTGG...CGATACTCTCAAATCTAACTGGACGTGCTTTCGCCTTTGCATCTGACCATCTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000202217.3
CDS-3UTR TCA 90 bp GGCAGATGGTCAGATGCAAAGGCGAAAGCACGTCCAGTTAGATTTGAGAGTATCTCTTGTTGCCAATCTTaGCCTCTTCAGTACTGCCGA +
Preference number: 4 (lower is better)
Translates to: GRWSDAKAKARPVRFESISCCQS*PLQYCR
Trigger: TCGGCAGTACTGAAGAGGTCAAGATTGGCAACAAGA...GATACTCTCAAATCTAACTGGACGTGCTTTCGCCTTTGCATCTGACCATCTGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000202217.3
CDS-3UTR TCA 90 bp TGGCTTGCCATACTGTCTCTAACAGAACAGAGAACCCACGTGAACAACTGCGATAGGTCGAACTTCTCATaGAGCTCTTTTTCTGCCTCC +
Preference number: 4 (lower is better)
Translates to: WLAILSLTEQRTHVNNCDRSNFS*SSFSAS
Trigger: GGAGGCAGAAAAAGAGCTTCATGAGAAGTTCGACCT...ATCGCAGTTGTTCACGTGGGTTCTCTGTTCTGTTAGAGACAGTATGGCAAGCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000201700.4
CDS-3UTR GCA 90 bp ACTTCTTTCTCTCAAGAGGCAGATGGTCAGATGCAAAGGCGAAAGCACGTCCAGCCATCAATGTGGATTTaGCAATACCTGTCTCACCCA +
Preference number: 4 (lower is better)
Translates to: TSFSQEADGQMQRRKHVQPSMWI*QYLSHP
Trigger: TGGGTGAGACAGGTATTGGCAAATCCACATTGATGG...CTGGACGTGCTTTCGCCTTTGCATCTGACCATCTGCCTCTTGAGAGAAAGAAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000202217.3
CDS-3UTR GCA 90 bp AGAGAGAGTAGGGCTTGTCAACGGGATGGCTACATAAAGAAGAAGATGCAAAGGTTTTCGTTCTCAACCTaGACCACACCCCAAGGGTAC +
Preference number: 4 (lower is better)
Translates to: RESRACQRDGYIKKKMQRFSFST*TTPQGY
Trigger: GTACCCTTGGGGTGTGGTGCAGGTTGAGAACGAAAA...CCTTTGCATCTTCTTCTTTATGTAGCCATCCCGTTGACAAGCCCTACTCTCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000201421.4
CDS-3UTR GCA 90 bp GCAGATGGTCAGATGCAAAGGCGAAAGCACGTCCAGTTAGATTTGAGAGTATCGGAACTCGTTCCTCTTTaGTTCGTAGGTCTCCTGAAG +
Preference number: 4 (lower is better)
Translates to: ADGQMQRRKHVQLDLRVSELVPL*FVGLLK
Trigger: CTTCAGGAGACCTACGAAGCAAAGAGGAACGAGTTC...CGATACTCTCAAATCTAACTGGACGTGCTTTCGCCTTTGCATCTGACCATCTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000202217.3
CDS-3UTR CCA 90 bp GCCCACTTCTTTCTCTCAAGAGGCAGATGGTCAGATGCAAAGGCGAAAGCACGTCTCGTTGTGAGTAGCTaGGTCACTTTCAAATTTGGT +
Preference number: 4 (lower is better)
Translates to: AHFFLSRGRWSDAKAKARLVVSS*VTFKFG
Trigger: ACCAAATTTGAAAGTGACCCAGCTACTCACAACGAG...ACGTGCTTTCGCCTTTGCATCTGACCATCTGCCTCTTGAGAGAAAGAAGTGGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000202217.3
CDS-3UTR CCA 90 bp CGTGCAGAGAGGCCAAAGCTGTCCAACCAAAAACTAAAAAGAAGTGGCCATTGTGGAGTTCATAGCTTCTaGCTTTTAACCGGACGCCTG +
Preference number: 4 (lower is better)
Translates to: RAERPKLSNQKLKRSGHCGVHSF*LLTGRL
Trigger: CAGGCGTCCGGTTAAAAGCCAGAAGCTATGAACTCC...ACAATGGCCACTTCTTTTTAGTTTTTGGTTGGACAGCTTTGGCCTCTCTGCACG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000074733.11
CDS-3UTR TCA 90 bp AGAGAGAGTAGGGCTTGTCAACGGGATGGCTACATAAAGAAGAAGATGCAAAGGTCTTGTTGCCAATCTTaGCCTCTTCAGTACTGCCGA +
Preference number: 4 (lower is better)
Translates to: RESRACQRDGYIKKKMQRSCCQS*PLQYCR
Trigger: TCGGCAGTACTGAAGAGGTCAAGATTGGCAACAAGA...CCTTTGCATCTTCTTCTTTATGTAGCCATCCCGTTGACAAGCCCTACTCTCTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000201421.4
CDS-3UTR TCA 90 bp AAAAACCAGCTCCCACTAGCTGCTGTTTGGAGTATAAAATCCAGCAGCTGGCTTTCTTGTTGCCAATCTTaGCCTCTTCAGTACTGCCGA +
Preference number: 4 (lower is better)
Translates to: KNQLPLAAVWSIKSSSWLSCCQS*PLQYCR
Trigger: TCGGCAGTACTGAAGAGGTCAAGATTGGCAACAAGA...AAGCCAGCTGCTGGATTTTATACTCCAAACAGCAGCTAGTGGGAGCTGGTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000201700.4
CDS-3UTR GCA 90 bp GTGGGAATCTTTCCCCAGCTTTTTGCCACTGTCACAATCAAAGGCCCTCTACATATGGACACTCATCGTTaGGTTAATCTCTGCCACTGT +
Preference number: 4 (lower is better)
Translates to: VGIFPQLFATVTIKGPLHMDTHR*VNLCHC
Trigger: ACAGTGGCAGAGATTAACGCAACGATGAGTGTCCAT...ATGTAGAGGGCCTTTGATTGTGACAGTGGCAAAAAGCTGGGGAAAGATTCCCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000074733.11
CDS-3UTR GCA 90 bp TGGCTTGCCATACTGTCTCTAACAGAACAGAGAACCCACGTGAACAACTGCGATATGGACACTCATCGTTaGGTTAATCTCTGCCACTGT +
Preference number: 4 (lower is better)
Translates to: WLAILSLTEQRTHVNNCDMDTHR*VNLCHC
Trigger: ACAGTGGCAGAGATTAACGCAACGATGAGTGTCCAT...ATCGCAGTTGTTCACGTGGGTTCTCTGTTCTGTTAGAGACAGTATGGCAAGCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000201700.4
CDS-3UTR GCA 90 bp AATGGCTTTCACTCTGGCTTGCCAGGTAGAGACGCCATTCTCAGTACTAGCTTTTCTTTTTCTGGAAGTTaGTCACCTCCTCCTCAAGCT +
Preference number: 4 (lower is better)
Translates to: NGFHSGLPGRDAILSTSFSFSGS*SPPPQA
Trigger: AGCTTGAGGAGGAGGTGAGCAACTTCCAGAAAAAGA...AAAGCTAGTACTGAGAATGGCGTCTCTACCTGGCAAGCCAGAGTGAAAGCCATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000201700.4
CDS-3UTR GCA 90 bp AGAGGCAGATGGTCAGATGCAAAGGCGAAAGCACGTCCAGTTAGATTTGAGAGTTCTTTTTCTGGAAGTTaGTCACCTCCTCCTCAAGCT +
Preference number: 4 (lower is better)
Translates to: RGRWSDAKAKARPVRFESSFSGS*SPPPQA
Trigger: AGCTTGAGGAGGAGGTGAGCAACTTCCAGAAAAAGA...ACTCTCAAATCTAACTGGACGTGCTTTCGCCTTTGCATCTGACCATCTGCCTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000202217.3
CDS-3UTR CCA 90 bp CAGCAGCTGGCTTGCCATACTGTCTCTAACAGAACAGAGAACCCACGTGAACAACTCGTTGTGAGTAGCTaGGTCACTTTCAAATTTGGT +
Preference number: 4 (lower is better)
Translates to: QQLACHTVSNRTENPREQLVVSS*VTFKFG
Trigger: ACCAAATTTGAAAGTGACCCAGCTACTCACAACGAG...TTGTTCACGTGGGTTCTCTGTTCTGTTAGAGACAGTATGGCAAGCCAGCTGCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000201700.4
CDS-3UTR CCA 90 bp AAGAGGAAGCATAAACTGTCGGGTAAAATAGAAATGTGGCCAGTATTTAGCTTTTCCTTCTTGGTTTGCTaGGCCCCAGACTGCTGGGCC +
Preference number: 4 (lower is better)
Translates to: KRKHKLSGKIEMWPVFSFSFLVC*APDCWA
Trigger: GGCCCAGCAGTCTGGGGCCCAGCAAACCAAGAAGGA...AAAGCTAAATACTGGCCACATTTCTATTTTACCCGACAGTTTATGCTTCCTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000074733.11
3UTR CAA 72 bp ACTTACATGCAAAGGCGAAAGCACGTCCAGTTAGATTaGAGAGTATCGTTTATTCCGTGCAGAGCCAGGGAC +
Preference number: 4 (lower is better)
Translates to: TYMQRRKHVQLD*RVSFIPCRARD
Trigger: GTCCCTGGCTCTGCACGGAATAAACGATACTCTCAAATCTAACTGGACGTGCTTTCGCCTTTGCATGTAAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000074733.11
CDS-3UTR CCA 90 bp ACTGAGCATAAAGGAGAAGCCACTAGCCTGAGATCCGGAATGTCAGGGAGCAAGCTGTCAAATCCAACATaGCCAGAAAGTGATAAGTTT +
Preference number: 4 (lower is better)
Translates to: TEHKGEATSLRSGMSGSKLSNPT*PESDKF
Trigger: AAACTTATCACTTTCTGGCCATGTTGGATTTGACAG...CTTGCTCCCTGACATTCCGGATCTCAGGCTAGTGGCTTCTCCTTTATGCTCAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000074733.11
CDS-3UTR CCA 90 bp CTTAGACCAGTTTCCGGCTCCCTTGTTCTTTGGACATGTTTCCCACTGCCTCAGCTGTCAAATCCAACATaGCCAGAAAGTGATAAGTTT +
Preference number: 4 (lower is better)
Translates to: LRPVSGSLVLWTCFPLPQLSNPT*PESDKF
Trigger: AAACTTATCACTTTCTGGCCATGTTGGATTTGACAG...CTGAGGCAGTGGGAAACATGTCCAAAGAACAAGGGAGCCGGAAACTGGTCTAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000201700.4
CDS-3UTR CCA 90 bp GCCCACTTCTTTCTCTCAAGAGGCAGATGGTCAGATGCAAAGGCGAAAGCACGTCTGTCAAATCCAACATaGCCAGAAAGTGATAAGTTT +
Preference number: 4 (lower is better)
Translates to: AHFFLSRGRWSDAKAKARLSNPT*PESDKF
Trigger: AAACTTATCACTTTCTGGCCATGTTGGATTTGACAG...ACGTGCTTTCGCCTTTGCATCTGACCATCTGCCTCTTGAGAGAAAGAAGTGGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000202217.3
CDS-3UTR GCA 90 bp CCATTAAGAGAGAGTAGGGCTTGTCAACGGGATGGCTACATAAAGAAGAAGATGCGTTGCGTTAATCTCTaGCACTGTTTCCTCATCTGT +
Preference number: 4 (lower is better)
Translates to: PLRESRACQRDGYIKKKMRCVNL*HCFLIC
Trigger: ACAGATGAGGAAACAGTGGCAGAGATTAACGCAACG...CATCTTCTTCTTTATGTAGCCATCCCGTTGACAAGCCCTACTCTCTCTTAATGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000201421.4
CDS-3UTR GCA 90 bp TCTCAAGAGGCAGATGGTCAGCTGAAAAATAAAAACACCGTATCAATAGGACATAGTACTGCCGACCACTaGGAATGGGAGATGGACACT +
Preference number: 4 (lower is better)
Translates to: SQEADGQLKNKNTVSIGHSTADH*EWEMDT
Trigger: AGTGTCCATCTCCCATTCGCAGTGGTCGGCAGTACT...ATGTCCTATTGATACGGTGTTTTTATTTTTCAGCTGACCATCTGCCTCTTGAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000201421.4
CDS-3UTR CCA 90 bp GGGACTACTGTGAAGAAAGGTATAGATACGGAAAGAAAGAGCAGCAATAACCAGGATTTGTTGACCAGCTaGTCGGGCAGACTGTCAAAT +
Preference number: 4 (lower is better)
Translates to: GTTVKKGIDTERKSSNNQDLLTS*SGRLSN
Trigger: ATTTGACAGTCTGCCCGACCAGCTGGTCAACAAATC...CTGGTTATTGCTGCTCTTTCTTTCCGTATCTATACCTTTCTTCACAGTAGTCCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000074733.11
CDS-3UTR CCA 90 bp AACGAATCAAACAGGACACAGATGACAGAGGTACGCTACTACTGCCAAAGCAGGTTCACAAAATCACAGTaGTTTTCGTTCTCAACCTGC +
Preference number: 4 (lower is better)
Translates to: NESNRTQMTEVRYYCQSRFTKSQ*FSFSTC
Trigger: GCAGGTTGAGAACGAAAACCACTGTGATTTTGTGAA...CCTGCTTTGGCAGTAGTAGCGTACCTCTGTCATCTGTGTCCTGTTTGATTCGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000074733.11
CDS-3UTR CCA 90 bp GACATGTTTCCCACTGCCTCAGAGCTTGCAAAAGCAATGTGTGTAGAGCATGCTTTCACAAAATCACAGTaGTTTTCGTTCTCAACCTGC +
Preference number: 4 (lower is better)
Translates to: DMFPTASELAKAMCVEHAFTKSQ*FSFSTC
Trigger: GCAGGTTGAGAACGAAAACCACTGTGATTTTGTGAA...AGCATGCTCTACACACATTGCTTTTGCAAGCTCTGAGGCAGTGGGAAACATGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000201700.4
CDS-3UTR CCA 90 bp GGCAGATGGTCAGATGCAAAGGCGAAAGCACGTCCAGTTAGATTTGAGAGTATCTTCACAAAATCACAGTaGTTTTCGTTCTCAACCTGC +
Preference number: 4 (lower is better)
Translates to: GRWSDAKAKARPVRFESIFTKSQ*FSFSTC
Trigger: GCAGGTTGAGAACGAAAACCACTGTGATTTTGTGAA...GATACTCTCAAATCTAACTGGACGTGCTTTCGCCTTTGCATCTGACCATCTGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000202217.3
3UTR CAA 72 bp AAAGCTGTCCAACCAAAAACTAAAAAGAAGTGGCCATaGTGCACTGAGCATAAAGGAGAAGCCACTAGCCTG +
Preference number: 4 (lower is better)
Translates to: KAVQPKTKKKWP*CTEHKGEATSL
Trigger: CAGGCTAGTGGCTTCTCCTTTATGCTCAGTGCACAATGGCCACTTCTTTTTAGTTTTTGGTTGGACAGCTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000074733.11
CDS-3UTR CCA 90 bp CCATTAAGAGAGAGTAGGGCTTGTCAACGGGATGGCTACATAAAGAAGAAGATGCTCGTTGTGAGTAGCTaGGTCACTTTCAAATTTGGT +
Preference number: 4 (lower is better)
Translates to: PLRESRACQRDGYIKKKMLVVSS*VTFKFG
Trigger: ACCAAATTTGAAAGTGACCCAGCTACTCACAACGAG...CATCTTCTTCTTTATGTAGCCATCCCGTTGACAAGCCCTACTCTCTCTTAATGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000201421.4
CDS-3UTR CCA 90 bp TCTCAAGAGGCAGATGGTCAGCTGAAAAATAAAAACACCGTATCAATAGGACATGGAGTTCATAGCTTCTaGCTTTTAACCGGACGCCTG +
Preference number: 4 (lower is better)
Translates to: SQEADGQLKNKNTVSIGHGVHSF*LLTGRL
Trigger: CAGGCGTCCGGTTAAAAGCCAGAAGCTATGAACTCC...ATGTCCTATTGATACGGTGTTTTTATTTTTCAGCTGACCATCTGCCTCTTGAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000201421.4
CDS-3UTR CCA 90 bp AGAGAGAGTAGGGCTTGTCAACGGGATGGCTACATAAAGAAGAAGATGCAAAGGTTCACAAAATCACAGTaGTTTTCGTTCTCAACCTGC +
Preference number: 4 (lower is better)
Translates to: RESRACQRDGYIKKKMQRFTKSQ*FSFSTC
Trigger: GCAGGTTGAGAACGAAAACCACTGTGATTTTGTGAA...CCTTTGCATCTTCTTCTTTATGTAGCCATCCCGTTGACAAGCCCTACTCTCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000201421.4
CDS-3UTR CCA 90 bp TCTCAAGAGGCAGATGGTCAGCTGAAAAATAAAAACACCGTATCAATAGGACATTATCCTTGTCCTTCTTaGTTTGCTGGGCCCCAGACT +
Preference number: 4 (lower is better)
Translates to: SQEADGQLKNKNTVSIGHYPCPS*FAGPQT
Trigger: AGTCTGGGGCCCAGCAAACCAAGAAGGACAAGGATA...ATGTCCTATTGATACGGTGTTTTTATTTTTCAGCTGACCATCTGCCTCTTGAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000201421.4
3UTR CAA 72 bp TTGGTAAAGCCTAGGATAAGAAGAGAATCGGGTAGCTaGTTCCAGAGCAAAAGATGTCCGTTACTAAACGGA +
Preference number: 4 (lower is better)
Translates to: LVKPRIRRESGS*FQSKRCPLLNG
Trigger: TCCGTTTAGTAACGGACATCTTTTGCTCTGGAACAAGCTACCCGATTCTCTTCTTATCCTAGGCTTTACCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000201700.4
CDS-3UTR TCA 90 bp TCTCAAGAGGCAGATGGTCAGCTGAAAAATAAAAACACCGTATCAATAGGACATAGGTCGAACTTCTCATaGAGCTCTTTTTCTGCCTCC +
Preference number: 4 (lower is better)
Translates to: SQEADGQLKNKNTVSIGHRSNFS*SSFSAS
Trigger: GGAGGCAGAAAAAGAGCTTCATGAGAAGTTCGACCT...ATGTCCTATTGATACGGTGTTTTTATTTTTCAGCTGACCATCTGCCTCTTGAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENSMUST00000201421.4
CDS-3UTR GCA 90 bp TCTCAAGAGGCAGATGGTCAGCTGAAAAATAAAAACACCGTATCAATAGGACATGAACTCGTTCCTCTTTaGTTCGTAGGTCTCCTGAAG +
Preference number: 4 (lower is better)
Translates to: SQEADGQLKNKNTVSIGHELVPL*FVGLLK
Trigger: CTTCAGGAGACCTACGAAGCAAAGAGGAACGAGTTC...ATGTCCTATTGATACGGTGTTTTTATTTTTCAGCTGACCATCTGCCTCTTGAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000201421.4
CDS-3UTR TCA 90 bp CCCACTCTTTTCATTAATATAGCGTTACTATTTTTGGTAGTTGAAGTCACTTCGCCACGCACAGGATGTTaGAACAGAATCCTTGAGAAG +
Preference number: 4 (lower is better)
Translates to: PTLFINIALLFLVVEVTSPRTGC*NRILEK
Trigger: CTTCTCAAGGATTCTGTTTCAACATCCTGTGCGTGG...CGAAGTGACTTCAACTACCAAAAATAGTAACGCTATATTAATGAAAAGAGTGGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000201421.4
CDS-3UTR CCA 90 bp CCCACTCTTTTCATTAATATAGCGTTACTATTTTTGGTAGTTGAAGTCACTTCGCTGTCAAATCCAACATaGCCAGAAAGTGATAAGTTT +
Preference number: 4 (lower is better)
Translates to: PTLFINIALLFLVVEVTSLSNPT*PESDKF
Trigger: AAACTTATCACTTTCTGGCCATGTTGGATTTGACAG...CGAAGTGACTTCAACTACCAAAAATAGTAACGCTATATTAATGAAAAGAGTGGG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000201421.4
CDS-3UTR CAA 90 bp TCGGACAGCTGCTACTGGGGTGCCACAGGAAGGGACAACCGGAGAGCATCTAGCCTTGTCCTTCTTGGTTaGCTGGGCCCCAGACTGCTG +
Preference number: 5 (lower is better)
Translates to: SDSCYWGATGRDNRRASSLVLLG*LGPRLL
Trigger: CAGCAGTCTGGGGCCCAGCAAACCAAGAAGGACAAG...GCTAGATGCTCTCCGGTTGTCCCTTCCTGTGGCACCCCAGTAGCAGCTGTCCGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000201700.4
CDS-3UTR CAA 90 bp CCCACTTCTTTCTCTCAAGAGGCAGATGGTCAGATGCAAAGGCGAAAGCACGTCCTGCTGGGCCTGGGATaGCAAGAGCTGAGCCGCCGC +
Preference number: 5 (lower is better)
Translates to: PTSFSQEADGQMQRRKHVLLGLG*QELSRR
Trigger: GCGGCGGCTCAGCTCTTGCAATCCCAGGCCCAGCAG...GACGTGCTTTCGCCTTTGCATCTGACCATCTGCCTCTTGAGAGAAAGAAGTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000202217.3
CDS-3UTR CAA 90 bp AGAAGGCAGCAAGGGTTGGCCCACTCTGATGACCTGCTGATAGCTGAGGATCCTTCGGGGTCCGTGTCCTaGAAGCCCATCTCCTCAAGC +
Preference number: 5 (lower is better)
Translates to: RRQQGLAHSDDLLIAEDPSGSVS*KPISSS
Trigger: GCTTGAGGAGATGGGCTTCAAGGACACGGACCCCGA...AGGATCCTCAGCTATCAGCAGGTCATCAGAGTGGGCCAACCCTTGCTGCCTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000201421.4
CDS-3UTR CAA 90 bp GCTAGAAAAATGGAAGCAAAGCCGATGTCTGTGTTGGAGCTATCCCCTTCACCACTGCTGGGCCTGGGATaGCAAGAGCTGAGCCGCCGC +
Preference number: 5 (lower is better)
Translates to: ARKMEAKPMSVLELSPSPLLGLG*QELSRR
Trigger: GCGGCGGCTCAGCTCTTGCAATCCCAGGCCCAGCAG...TGGTGAAGGGGATAGCTCCAACACAGACATCGGCTTTGCTTCCATTTTTCTAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000074733.11
CDS-3UTR CAA 90 bp TGGCTTGCCATACTGTCTCTAACAGAACAGAGAACCCACGTGAACAACTGCGATCTGCTGGGCCTGGGATaGCAAGAGCTGAGCCGCCGC +
Preference number: 5 (lower is better)
Translates to: WLAILSLTEQRTHVNNCDLLGLG*QELSRR
Trigger: GCGGCGGCTCAGCTCTTGCAATCCCAGGCCCAGCAG...ATCGCAGTTGTTCACGTGGGTTCTCTGTTCTGTTAGAGACAGTATGGCAAGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000201700.4
CDS-3UTR CAA 90 bp ACAAGCAGAGGACACCAGTGCTCAAGCTCTTACGTGGTGCCCGGTGAAGAAGCACTTGTCCTTCTTGGTTaGCTGGGCCCCAGACTGCTG +
Preference number: 5 (lower is better)
Translates to: TSRGHQCSSSYVVPGEEALVLLG*LGPRLL
Trigger: CAGCAGTCTGGGGCCCAGCAAACCAAGAAGGACAAG...TGCTTCTTCACCGGGCACCACGTAAGAGCTTGAGCACTGGTGTCCTCTGCTTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000074733.11
CDS-3UTR CAA 90 bp CAGCAAGGGTTGGCCCACTCTGATGACCTGCTGATAGCTGAGGATCCTGATGGGCTGGCCTTCGCCATCTaGTTGCCAATCTTGACCTCT +
Preference number: 5 (lower is better)
Translates to: QQGLAHSDDLLIAEDPDGLAFAI*LPILTS
Trigger: AGAGGTCAAGATTGGCAACAAGATGGCGAAGGCCAG...CCCATCAGGATCCTCAGCTATCAGCAGGTCATCAGAGTGGGCCAACCCTTGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000201421.4
CDS-3UTR CAA 90 bp CAGCAAGGGTTGGCCCACTCTGATGACCTGCTGATAGCTGAGGATCCTGATGGGCTTCTTCTTCTCCTCTaGGTGAGTCCGCTTCAGGAG +
Preference number: 5 (lower is better)
Translates to: QQGLAHSDDLLIAEDPDGLLLLL*VSPLQE
Trigger: CTCCTGAAGCGGACTCACCAAGAGGAGAAGAAGAAG...CCCATCAGGATCCTCAGCTATCAGCAGGTCATCAGAGTGGGCCAACCCTTGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000201421.4
CDS-3UTR CAA 90 bp TGGAACAGGCATACAAGGCAAATCGACTTTCGAGAAACAAAGTCCAGCCACGCGTCGGGGTCCGTGTCCTaGAAGCCCATCTCCTCAAGC +
Preference number: 5 (lower is better)
Translates to: WNRHTRQIDFRETKSSHASGSVS*KPISSS
Trigger: GCTTGAGGAGATGGGCTTCAAGGACACGGACCCCGA...CGCGTGGCTGGACTTTGTTTCTCGAAAGTCGATTTGCCTTGTATGCCTGTTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000074733.11
CDS-3UTR CAA 90 bp AGGATGAAGAACAAGAACCCTCAAGAGGGTTCCAGGGCTGCCCATATAGCTACATCGGGGTCCGTGTCCTaGAAGCCCATCTCCTCAAGC +
Preference number: 5 (lower is better)
Translates to: RMKNKNPQEGSRAAHIATSGSVS*KPISSS
Trigger: GCTTGAGGAGATGGGCTTCAAGGACACGGACCCCGA...TGTAGCTATATGGGCAGCCCTGGAACCCTCTTGAGGGTTCTTGTTCTTCATCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000201700.4
CDS-3UTR CAA 90 bp GCAGATGGTCAGATGCAAAGGCGAAAGCACGTCCAGTTAGATTTGAGAGTATCGTCGGGGTCCGTGTCCTaGAAGCCCATCTCCTCAAGC +
Preference number: 5 (lower is better)
Translates to: ADGQMQRRKHVQLDLRVSSGSVS*KPISSS
Trigger: GCTTGAGGAGATGGGCTTCAAGGACACGGACCCCGA...CGATACTCTCAAATCTAACTGGACGTGCTTTCGCCTTTGCATCTGACCATCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000202217.3
CDS-3UTR CAA 90 bp CACTTCTTTCTCTCAAGAGGCAGATGGTCAGATGCAAAGGCGAAAGCACGTCCACTTGTCCTTCTTGGTTaGCTGGGCCCCAGACTGCTG +
Preference number: 5 (lower is better)
Translates to: HFFLSRGRWSDAKAKARPLVLLG*LGPRLL
Trigger: CAGCAGTCTGGGGCCCAGCAAACCAAGAAGGACAAG...TGGACGTGCTTTCGCCTTTGCATCTGACCATCTGCCTCTTGAGAGAAAGAAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000202217.3
CDS-3UTR CAA 90 bp ACGGAAAGAAAGAGCAGCAATAACCAGCTACCAGAGGCTCGGGAGCAGTGGGAGATCTTGTTGCCAATCTaGACCTCTTCAGTACTGCCG +
Preference number: 5 (lower is better)
Translates to: TERKSSNNQLPEAREQWEILLPI*TSSVLP
Trigger: CGGCAGTACTGAAGAGGTCAAGATTGGCAACAAGAT...CTCCCACTGCTCCCGAGCCTCTGGTAGCTGGTTATTGCTGCTCTTTCTTTCCGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000074733.11
CDS-3UTR CAA 90 bp CTGGCTGAGAGAGACCCTTCTGGATCGATTCATACAGAGCCCAAGCTGAGAAAACTTCTTCTTCTCCTCTaGGTGAGTCCGCTTCAGGAG +
Preference number: 5 (lower is better)
Translates to: LAERDPSGSIHTEPKLRKLLLLL*VSPLQE
Trigger: CTCCTGAAGCGGACTCACCAAGAGGAGAAGAAGAAG...TTTTCTCAGCTTGGGCTCTGTATGAATCGATCCAGAAGGGTCTCTCTCAGCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000074733.11
CDS-3UTR CAA 90 bp TCTCAAGAGGCAGATGGTCAGCTGAAAAATAAAAACACCGTATCAATAGGACATCTGCTGGGCCTGGGATaGCAAGAGCTGAGCCGCCGC +
Preference number: 5 (lower is better)
Translates to: SQEADGQLKNKNTVSIGHLLGLG*QELSRR
Trigger: GCGGCGGCTCAGCTCTTGCAATCCCAGGCCCAGCAG...ATGTCCTATTGATACGGTGTTTTTATTTTTCAGCTGACCATCTGCCTCTTGAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000201421.4
CDS-3UTR CAA 90 bp CCTGCCGCCACTTGGAACAGGCATACAAGGCAAATCGACTTTCGAGAAACAAAGTTATCCTTGTCCTTCTaGGTTTGCTGGGCCCCAGAC +
Preference number: 5 (lower is better)
Translates to: PAATWNRHTRQIDFRETKLSLSF*VCWAPD
Trigger: GTCTGGGGCCCAGCAAACCAAGAAGGACAAGGATAA...CTTTGTTTCTCGAAAGTCGATTTGCCTTGTATGCCTGTTCCAAGTGGCGGCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000074733.11
CDS CCA 90 bp CCAATCTTGACCTCTTCAGTACTGCCGACCACTGCGAATGGGAGATaGACACTCATCGTTGCGTTAATCTCTGCCACTGTTTCCTCATCT +
Preference number: 5 (lower is better)
Translates to: PILTSSVLPTTANGR*TLIVALISATVSSS
Trigger: AGATGAGGAAACAGTGGCAGAGATTAACGCAACGATGAGTGTCCATCTCCCATTCGCAGTGGTCGGCAGTACTGAAGAGGTCAAGATTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000074733.11
ENSMUST00000201421.4
ENSMUST00000201700.4
ENSMUST00000202196.4
ENSMUST00000202217.3
ENSMUST00000202308.4
CDS-3UTR CAA 90 bp ATAGATACGGAAAGAAAGAGCAGCAATAACCAGCTACCAGAGGCTCGGGAGCAGCCACTGTGTCAACGATaGTTAGCTTCAGCCGTACGT +
Preference number: 5 (lower is better)
Translates to: IDTERKSSNNQLPEAREQPLCQR*LASAVR
Trigger: ACGTACGGCTGAAGCTAACAATCGTTGACACAGTGG...CTGCTCCCGAGCCTCTGGTAGCTGGTTATTGCTGCTCTTTCTTTCCGTATCTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000074733.11
CDS-3UTR CAA 90 bp CTGTTGCTGGTGAGTTGCAAAGTAAAGGAGGACGAAAGCAAGAAACCCACACCTCTGGCCTTCGCCATCTaGTTGCCAATCTTGACCTCT +
Preference number: 5 (lower is better)
Translates to: LLLVSCKVKEDESKKPTPLAFAI*LPILTS
Trigger: AGAGGTCAAGATTGGCAACAAGATGGCGAAGGCCAG...AGGTGTGGGTTTCTTGCTTTCGTCCTCCTTTACTTTGCAACTCACCAGCAACAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000074733.11
CDS-3UTR CAA 90 bp GGCAGATGGTCAGATGCAAAGGCGAAAGCACGTCCAGTTAGATTTGAGAGTATCCTGGCCTTCGCCATCTaGTTGCCAATCTTGACCTCT +
Preference number: 5 (lower is better)
Translates to: GRWSDAKAKARPVRFESILAFAI*LPILTS
Trigger: AGAGGTCAAGATTGGCAACAAGATGGCGAAGGCCAG...GATACTCTCAAATCTAACTGGACGTGCTTTCGCCTTTGCATCTGACCATCTGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000202217.3
CDS-3UTR CAA 90 bp TTTCCGGCTCCCTTGTTCTTTGGACATGTTTCCCACTGCCTCAGAGCTTGCAAAGGAACTCGTTCCTCTTaGCTTCGTAGGTCTCCTGAA +
Preference number: 5 (lower is better)
Translates to: FPAPLFFGHVSHCLRACKGTRSS*LRRSPE
Trigger: TTCAGGAGACCTACGAAGCAAAGAGGAACGAGTTCC...TTTGCAAGCTCTGAGGCAGTGGGAAACATGTCCAAAGAACAAGGGAGCCGGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000201700.4
CDS-3UTR CAA 90 bp AGAGGCAGATGGTCAGATGCAAAGGCGAAAGCACGTCCAGTTAGATTTGAGAGTCTTCTTCTTCTCCTCTaGGTGAGTCCGCTTCAGGAG +
Preference number: 5 (lower is better)
Translates to: RGRWSDAKAKARPVRFESLLLLL*VSPLQE
Trigger: CTCCTGAAGCGGACTCACCAAGAGGAGAAGAAGAAG...ACTCTCAAATCTAACTGGACGTGCTTTCGCCTTTGCATCTGACCATCTGCCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000202217.3
CDS-3UTR CAA 90 bp GCAGATGGTCAGATGCAAAGGCGAAAGCACGTCCAGTTAGATTTGAGAGTATCGTTATCCTTGTCCTTCTaGGTTTGCTGGGCCCCAGAC +
Preference number: 5 (lower is better)
Translates to: ADGQMQRRKHVQLDLRVSLSLSF*VCWAPD
Trigger: GTCTGGGGCCCAGCAAACCAAGAAGGACAAGGATAA...CGATACTCTCAAATCTAACTGGACGTGCTTTCGCCTTTGCATCTGACCATCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000202217.3
CDS-3UTR CAA 90 bp ACGGAAAGAAAGAGCAGCAATAACCAGCTACCAGAGGCTCGGGAGCAGTGGGAGGCATTTTTCTTATCCTaGTCCTTCTTGGTTTGCTGG +
Preference number: 5 (lower is better)
Translates to: TERKSSNNQLPEAREQWEAFFLS*SFLVCW
Trigger: CCAGCAAACCAAGAAGGACAAGGATAAGAAAAATGC...CTCCCACTGCTCCCGAGCCTCTGGTAGCTGGTTATTGCTGCTCTTTCTTTCCGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000074733.11
CDS-3UTR CAA 90 bp CAGCAGCTGGCTTGCCATACTGTCTCTAACAGAACAGAGAACCCACGTGAACAATCCATCAATGTGGATTaGCCAATACCTGTCTCACCC +
Preference number: 5 (lower is better)
Translates to: QQLACHTVSNRTENPREQSINVD*PIPVSP
Trigger: GGGTGAGACAGGTATTGGCAAATCCACATTGATGGA...TTGTTCACGTGGGTTCTCTGTTCTGTTAGAGACAGTATGGCAAGCCAGCTGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000201700.4
CDS-3UTR CAA 90 bp ACGCCAGGATTAAGTGACCACAGCGCTGGGCTGGCTTGCCAGCTCTTAGTCTCAATCTTACTCTTGAATTaGTGCAATTCGTTTTTGGCG +
Preference number: 5 (lower is better)
Translates to: TPGLSDHSAGLACQLLVSILLLN*CNSFLA
Trigger: CGCCAAAAACGAATTGCACAAATTCAAGAGTAAGAT...TGAGACTAAGAGCTGGCAAGCCAGCCCAGCGCTGTGGTCACTTAATCCTGGCGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000201700.4
CDS-3UTR CAA 90 bp AGGATGAAGAACAAGAACCCTCAAGAGGGTTCCAGGGCTGCCCATATAGCTACAATCTTGTTGCCAATCTaGACCTCTTCAGTACTGCCG +
Preference number: 5 (lower is better)
Translates to: RMKNKNPQEGSRAAHIATILLPI*TSSVLP
Trigger: CGGCAGTACTGAAGAGGTCAAGATTGGCAACAAGAT...TGTAGCTATATGGGCAGCCCTGGAACCCTCTTGAGGGTTCTTGTTCTTCATCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000201700.4
CDS-3UTR CAA 90 bp AGCGTCAGGGAAAAGATGACAGGACAAATGATGCACCCCTCTCAGTTCTTACACGGAACTCGTTCCTCTTaGCTTCGTAGGTCTCCTGAA +
Preference number: 5 (lower is better)
Translates to: SVREKMTGQMMHPSQFLHGTRSS*LRRSPE
Trigger: TTCAGGAGACCTACGAAGCAAAGAGGAACGAGTTCC...GTGTAAGAACTGAGAGGGGTGCATCATTTGTCCTGTCATCTTTTCCCTGACGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000074733.11
CDS-3UTR CAA 90 bp GAGGCAGATGGTCAGATGCAAAGGCGAAAGCACGTCCAGTTAGATTTGAGAGTAGGAACTCGTTCCTCTTaGCTTCGTAGGTCTCCTGAA +
Preference number: 5 (lower is better)
Translates to: EADGQMQRRKHVQLDLRVGTRSS*LRRSPE
Trigger: TTCAGGAGACCTACGAAGCAAAGAGGAACGAGTTCC...TACTCTCAAATCTAACTGGACGTGCTTTCGCCTTTGCATCTGACCATCTGCCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000202217.3
CDS-3UTR CAA 90 bp GGCAGATGGTCAGATGCAAAGGCGAAAGCACGTCCAGTTAGATTTGAGAGTATCTCCATCAATGTGGATTaGCCAATACCTGTCTCACCC +
Preference number: 5 (lower is better)
Translates to: GRWSDAKAKARPVRFESISINVD*PIPVSP
Trigger: GGGTGAGACAGGTATTGGCAAATCCACATTGATGGA...GATACTCTCAAATCTAACTGGACGTGCTTTCGCCTTTGCATCTGACCATCTGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000202217.3
CDS-3UTR CAA 90 bp GCAGATGGTCAGATGCAAAGGCGAAAGCACGTCCAGTTAGATTTGAGAGTATCGATCTTGTTGCCAATCTaGACCTCTTCAGTACTGCCG +
Preference number: 5 (lower is better)
Translates to: ADGQMQRRKHVQLDLRVSILLPI*TSSVLP
Trigger: CGGCAGTACTGAAGAGGTCAAGATTGGCAACAAGAT...CGATACTCTCAAATCTAACTGGACGTGCTTTCGCCTTTGCATCTGACCATCTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000202217.3
CDS-3UTR CAA 90 bp CAATACAATAATCCTCCAGAAAAACCAGCTCCCACTAGCTGCTGTTTGGAGTATCTGGCCTTCGCCATCTaGTTGCCAATCTTGACCTCT +
Preference number: 5 (lower is better)
Translates to: QYNNPPEKPAPTSCCLEYLAFAI*LPILTS
Trigger: AGAGGTCAAGATTGGCAACAAGATGGCGAAGGCCAG...ATACTCCAAACAGCAGCTAGTGGGAGCTGGTTTTTCTGGAGGATTATTGTATTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000201700.4
CDS-3UTR CAA 90 bp CAATACAATAATCCTCCAGAAAAACCAGCTCCCACTAGCTGCTGTTTGGAGTATCTTCTTCTTCTCCTCTaGGTGAGTCCGCTTCAGGAG +
Preference number: 5 (lower is better)
Translates to: QYNNPPEKPAPTSCCLEYLLLLL*VSPLQE
Trigger: CTCCTGAAGCGGACTCACCAAGAGGAGAAGAAGAAG...ATACTCCAAACAGCAGCTAGTGGGAGCTGGTTTTTCTGGAGGATTATTGTATTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000201700.4
CDS-3UTR CAA 90 bp CAATACAATAATCCTCCAGAAAAACCAGCTCCCACTAGCTGCTGTTTGGAGTATTTATCCTTGTCCTTCTaGGTTTGCTGGGCCCCAGAC +
Preference number: 5 (lower is better)
Translates to: QYNNPPEKPAPTSCCLEYLSLSF*VCWAPD
Trigger: GTCTGGGGCCCAGCAAACCAAGAAGGACAAGGATAA...ATACTCCAAACAGCAGCTAGTGGGAGCTGGTTTTTCTGGAGGATTATTGTATTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000201700.4
CDS-3UTR CAA 90 bp AAGGTAGGCATTCAGATGCAGACTCCATCCCTAAGACAGTCTAACCAGATCATATCCATCAATGTGGATTaGCCAATACCTGTCTCACCC +
Preference number: 5 (lower is better)
Translates to: KVGIQMQTPSLRQSNQIISINVD*PIPVSP
Trigger: GGGTGAGACAGGTATTGGCAAATCCACATTGATGGA...TATGATCTGGTTAGACTGTCTTAGGGATGGAGTCTGCATCTGAATGCCTACCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000074733.11
CDS-3UTR CAA 90 bp CCATTAAGAGAGAGTAGGGCTTGTCAACGGGATGGCTACATAAAGAAGAAGATGATCTTGTTGCCAATCTaGACCTCTTCAGTACTGCCG +
Preference number: 5 (lower is better)
Translates to: PLRESRACQRDGYIKKKMILLPI*TSSVLP
Trigger: CGGCAGTACTGAAGAGGTCAAGATTGGCAACAAGAT...CATCTTCTTCTTTATGTAGCCATCCCGTTGACAAGCCCTACTCTCTCTTAATGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000201421.4
CDS-3UTR CAA 90 bp CAGCAGCTGGCTTGCCATACTGTCTCTAACAGAACAGAGAACCCACGTGAACAATACTTTTTCTTATCCTaGTCCTTCTTGGTTTGCTGG +
Preference number: 5 (lower is better)
Translates to: QQLACHTVSNRTENPREQYFFLS*SFLVCW
Trigger: CCAGCAAACCAAGAAGGACAAGGATAAGAAAAAGTA...TTGTTCACGTGGGTTCTCTGTTCTGTTAGAGACAGTATGGCAAGCCAGCTGCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000201700.4
CDS-3UTR CAA 90 bp ACTTCTTTCTCTCAAGAGGCAGATGGTCAGATGCAAAGGCGAAAGCACGTCCAGATCTTACTCTTGAATTaGTGCAATTCGTTTTTGGCG +
Preference number: 5 (lower is better)
Translates to: TSFSQEADGQMQRRKHVQILLLN*CNSFLA
Trigger: CGCCAAAAACGAATTGCACAAATTCAAGAGTAAGAT...CTGGACGTGCTTTCGCCTTTGCATCTGACCATCTGCCTCTTGAGAGAAAGAAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000202217.3
CDS-3UTR CAA 90 bp CCCACTCTTTTCATTAATATAGCGTTACTATTTTTGGTAGTTGAAGTCACTTCGCTTGTCCTTCTTGGTTaGCTGGGCCCCAGACTGCTG +
Preference number: 5 (lower is better)
Translates to: PTLFINIALLFLVVEVTSLVLLG*LGPRLL
Trigger: CAGCAGTCTGGGGCCCAGCAAACCAAGAAGGACAAG...CGAAGTGACTTCAACTACCAAAAATAGTAACGCTATATTAATGAAAAGAGTGGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000201421.4
CDS-3UTR CAA 90 bp GCAGATGGTCAGATGCAAAGGCGAAAGCACGTCCAGTTAGATTTGAGAGTATCGCTATTTTTCTTATCCTaGTCCTTCTTGGTTTGCTGG +
Preference number: 5 (lower is better)
Translates to: ADGQMQRRKHVQLDLRVSLFFLS*SFLVCW
Trigger: CCAGCAAACCAAGAAGGACAAGGATAAGAAAAATAG...CGATACTCTCAAATCTAACTGGACGTGCTTTCGCCTTTGCATCTGACCATCTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000202217.3
CDS-3UTR CAA 90 bp CCGTGCAGAGAGGCCAAAGCTGTCCAACCAAAAACTAAAAAGAAGTGGCCATTGATCTTACTCTTGAATTaGTGCAATTCGTTTTTGGCG +
Preference number: 5 (lower is better)
Translates to: PCREAKAVQPKTKKKWPLILLLN*CNSFLA
Trigger: CGCCAAAAACGAATTGCACAAATTCAAGAGTAAGAT...CAATGGCCACTTCTTTTTAGTTTTTGGTTGGACAGCTTTGGCCTCTCTGCACGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENSMUST00000074733.11
CDS-3UTR CAA 90 bp CCATTAAGAGAGAGTAGGGCTTGTCAACGGGATGGCTACATAAAGAAGAAGATGGGATTTTTCTTATCCTaGTCCTTCTTGGTTTGCTGG +
Preference number: 5 (lower is better)
Translates to: PLRESRACQRDGYIKKKMGFFLS*SFLVCW
Trigger: CCAGCAAACCAAGAAGGACAAGGATAAGAAAAATCC...CATCTTCTTCTTTATGTAGCCATCCCGTTGACAAGCCCTACTCTCTCTTAATGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000201421.4
CDS-3UTR CAA 90 bp TCTCAAGAGGCAGATGGTCAGCTGAAAAATAAAAACACCGTATCAATAGGACATTCCATCAATGTGGATTaGCCAATACCTGTCTCACCC +
Preference number: 5 (lower is better)
Translates to: SQEADGQLKNKNTVSIGHSINVD*PIPVSP
Trigger: GGGTGAGACAGGTATTGGCAAATCCACATTGATGGA...ATGTCCTATTGATACGGTGTTTTTATTTTTCAGCTGACCATCTGCCTCTTGAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000201421.4
CDS-3UTR CAA 90 bp CCCACTCTTTTCATTAATATAGCGTTACTATTTTTGGTAGTTGAAGTCACTTCGTTATCCTTGTCCTTCTaGGTTTGCTGGGCCCCAGAC +
Preference number: 5 (lower is better)
Translates to: PTLFINIALLFLVVEVTSLSLSF*VCWAPD
Trigger: GTCTGGGGCCCAGCAAACCAAGAAGGACAAGGATAA...CGAAGTGACTTCAACTACCAAAAATAGTAACGCTATATTAATGAAAAGAGTGGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000201421.4
CDS-3UTR CAA 90 bp CCCACTCTTTTCATTAATATAGCGTTACTATTTTTGGTAGTTGAAGTCACTTCGGGAACTCGTTCCTCTTaGCTTCGTAGGTCTCCTGAA +
Preference number: 5 (lower is better)
Translates to: PTLFINIALLFLVVEVTSGTRSS*LRRSPE
Trigger: TTCAGGAGACCTACGAAGCAAAGAGGAACGAGTTCC...CGAAGTGACTTCAACTACCAAAAATAGTAACGCTATATTAATGAAAAGAGTGGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000201421.4
CDS-3UTR CAA 90 bp CCCACTCTTTTCATTAATATAGCGTTACTATTTTTGGTAGTTGAAGTCACTTCGATCTTACTCTTGAATTaGTGCAATTCGTTTTTGGCG +
Preference number: 5 (lower is better)
Translates to: PTLFINIALLFLVVEVTSILLLN*CNSFLA
Trigger: CGCCAAAAACGAATTGCACAAATTCAAGAGTAAGAT...CGAAGTGACTTCAACTACCAAAAATAGTAACGCTATATTAATGAAAAGAGTGGG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000201421.4
CDS CCA 72 bp ACCTCTTCAGTACTGCCGACCACTGCGAATGGGAGATaGACACTCATCGTTGCGTTAATCTCTGCCACTGTT +
Preference number: 6 (lower is better)
Translates to: TSSVLPTTANGR*TLIVALISATV
Trigger: AACAGTGGCAGAGATTAACGCAACGATGAGTGTCCATCTCCCATTCGCAGTGGTCGGCAGTACTGAAGAGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000074733.11
ENSMUST00000201421.4
ENSMUST00000201700.4
ENSMUST00000202196.4
ENSMUST00000202217.3
ENSMUST00000202308.4
CDS GCA 72 bp GTTGCCAATCTTGACCTCTTCAGTACTGCCGACCACTaGGAATGGGAGATGGACACTCATCGTTGCGTTAAT +
Preference number: 6 (lower is better)
Translates to: VANLDLFSTADH*EWEMDTHRCVN
Trigger: ATTAACGCAACGATGAGTGTCCATCTCCCATTCGCAGTGGTCGGCAGTACTGAAGAGGTCAAGATTGGCAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000074733.11
ENSMUST00000201421.4
ENSMUST00000201700.4
ENSMUST00000202196.4
ENSMUST00000202217.3
ENSMUST00000202308.4
CDS CCA 72 bp AATCTTGACCTCTTCAGTACTGCCGACCACTGCGAATaGGAGATGGACACTCATCGTTGCGTTAATCTCTGC +
Preference number: 6 (lower is better)
Translates to: NLDLFSTADHCE*EMDTHRCVNLC
Trigger: GCAGAGATTAACGCAACGATGAGTGTCCATCTCCCATTCGCAGTGGTCGGCAGTACTGAAGAGGTCAAGATT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000074733.11
ENSMUST00000201421.4
ENSMUST00000201700.4
ENSMUST00000202196.4
ENSMUST00000202217.3
ENSMUST00000202308.4