Pregenerated sensors for SEPTIN10 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000019917Ensembl transcript IDs: ENSMUST00000165971.3, ENSMUST00000218171.2, ENSMUST00000220156.2
Found 31 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AGTAACGGTAGCGACTCCACCCACCTGCCCCACCTAACCCTTATGTaGTGTGAGGCTTGCTATTCGTGTGCTTCTCTTGATTCTGGTAAA | + |
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Preference number: 1 (lower is better) Translates to: SNGSDSTHLPHLTLM*CEACYSCASLDSGK Trigger: TTTACCAGAATCAAGAGAAGCACACGAATAGCAAGCCTCACAGCACATAAGGGTTAGGTGGGGCAGGTGGGTGGAGTCGCTACCGTTACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218171.2 |
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| 3UTR TCA 90 bp | CACAGCAAGATAGGAACTTACAGATTCCTAATGACAGTATATGTGTaGGAAATATGCACCTTGGCTGACAGATCAGCCTTATACGTGAAA | + |
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Preference number: 1 (lower is better) Translates to: HSKIGTYRFLMTVYV*EICTLADRSALYVK Trigger: TTTCACGTATAAGGCTGATCTGTCAGCCAAGGTGCATATTTCTCACACATATACTGTCATTAGGAATCTGTAAGTTCCTATCTTGCTGTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165971.3 |
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| 3UTR TCA 90 bp | TTTTCTACAAATGTGAATAGCTTTAGCCCTTTGCTAGATAATAACTaGGTTACTGATAAGGCAAAAGGAGCAAGAGCTCAATGCATACAA | + |
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Preference number: 1 (lower is better) Translates to: FSTNVNSFSPLLDNN*VTDKAKGARAQCIQ Trigger: TTGTATGCATTGAGCTCTTGCTCCTTTTGCCTTATCAGTAACTCAGTTATTATCTAGCAAAGGGCTAAAGCTATTCACATTTGTAGAAAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165971.3 |
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| 3UTR-3UTR TCA 90 bp | TCCACCCACCTGCCCCACCTAACCCTTATGTGCTGTGAGGCTTGCTATTCGTGTCAAGGAGACAGATGGTaGGGGGCAGGGACCGGGACA | + |
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Preference number: 2 (lower is better) Translates to: STHLPHLTLMCCEACYSCQGDRW*GAGTGT Trigger: TGTCCCGGTCCCTGCCCCTCACCATCTGTCTCCTTG...ACACGAATAGCAAGCCTCACAGCACATAAGGGTTAGGTGGGGCAGGTGGGTGGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000218171.2 |
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| 3UTR-3UTR GCA 90 bp | TCCACCCACCTGCCCCACCTAACCCTTATGTGCTGTGAGGCTTGCTATTCGTGTTGCTACTCTAGCTGCTaGGAGGACAGTGGTGACCAG | + |
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Preference number: 2 (lower is better) Translates to: STHLPHLTLMCCEACYSCCYSSC*EDSGDQ Trigger: CTGGTCACCACTGTCCTCGCAGCAGCTAGAGTAGCA...ACACGAATAGCAAGCCTCACAGCACATAAGGGTTAGGTGGGGCAGGTGGGTGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218171.2 |
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| 3UTR-3UTR GCA 90 bp | AACATCCGGCAGCAGGAAAGTGACCAAGATCCACAGCAAGATAGGAACTTACAGGGAGCAAGAGCTCAATaGATACAAACAGCTTTGACT | + |
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Preference number: 2 (lower is better) Translates to: NIRQQESDQDPQQDRNLQGARAQ*IQTALT Trigger: AGTCAAAGCTGTTTGTATGCATTGAGCTCTTGCTCC...CTGTAAGTTCCTATCTTGCTGTGGATCTTGGTCACTTTCCTGCTGCCGGATGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165971.3 |
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| 3UTR-3UTR CCA 90 bp | AACATCCGGCAGCAGGAAAGTGACCAAGATCCACAGCAAGATAGGAACTTACAGGAGAAATATGCACCTTaGCTGACAGATCAGCCTTAT | + |
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Preference number: 2 (lower is better) Translates to: NIRQQESDQDPQQDRNLQEKYAP*LTDQPY Trigger: ATAAGGCTGATCTGTCAGCCAAGGTGCATATTTCTC...CTGTAAGTTCCTATCTTGCTGTGGATCTTGGTCACTTTCCTGCTGCCGGATGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165971.3 |
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| 3UTR-3UTR GCA 90 bp | AAAGTTTCATCAATAAGGTACTTAACTCTGATTCTCCATCAGTATGCAGTTTCCATGTGCTGTGAGGCTTaGTATTCGTGTGCTTCTCTT | + |
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Preference number: 2 (lower is better) Translates to: KVSSIRYLTLILHQYAVSMCCEA*YSCASL Trigger: AAGAGAAGCACACGAATAGCAAGCCTCACAGCACAT...GGAAACTGCATACTGATGGAGAATCAGAGTTAAGTACCTTATTGATGAAACTTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218171.2 |
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| 3UTR GCA 72 bp | GAAGCCCTAAGACACGGCAGGTGCTACTCTAGCTGCTaGGAGGACAGTGGTGACCAGGGCGGAGTCTTGGTA | + |
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Preference number: 3 (lower is better) Translates to: EALRHGRCYSSC*EDSGDQGGVLV Trigger: TACCAAGACTCCGCCCTGGTCACCACTGTCCTCGCAGCAGCTAGAGTAGCACCTGCCGTGTCTTAGGGCTTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218171.2 |
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| 3UTR GCA 72 bp | AGCGACTCCACCCACCTGCCCCACCTAACCCTTATGTaGTGTGAGGCTTGCTATTCGTGTGCTTCTCTTGAT | + |
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Preference number: 3 (lower is better) Translates to: SDSTHLPHLTLM*CEACYSCASLD Trigger: ATCAAGAGAAGCACACGAATAGCAAGCCTCACAGCACATAAGGGTTAGGTGGGGCAGGTGGGTGGAGTCGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218171.2 |
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| 3UTR GCA 72 bp | CACCTGCCCCACCTAACCCTTATGTGCTGTGAGGCTTaGTATTCGTGTGCTTCTCTTGATTCTGGTAAATAC | + |
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Preference number: 3 (lower is better) Translates to: HLPHLTLMCCEA*YSCASLDSGKY Trigger: GTATTTACCAGAATCAAGAGAAGCACACGAATAGCAAGCCTCACAGCACATAAGGGTTAGGTGGGGCAGGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218171.2 |
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| 3UTR-3UTR CAA 90 bp | AACATCCGGCAGCAGGAAAGTGACCAAGATCCACAGCAAGATAGGAACTTACAGTGCATACAAACAGCTTaGACTGTGATGGCCATCTGT | + |
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Preference number: 3 (lower is better) Translates to: NIRQQESDQDPQQDRNLQCIQTA*TVMAIC Trigger: ACAGATGGCCATCACAGTCAAAGCTGTTTGTATGCA...CTGTAAGTTCCTATCTTGCTGTGGATCTTGGTCACTTTCCTGCTGCCGGATGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165971.3 |
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| 3UTR TCA 72 bp | ATAGGAACTTACAGATTCCTAATGACAGTATATGTGTaGGAAATATGCACCTTGGCTGACAGATCAGCCTTA | + |
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Preference number: 3 (lower is better) Translates to: IGTYRFLMTVYV*EICTLADRSAL Trigger: TAAGGCTGATCTGTCAGCCAAGGTGCATATTTCTCACACATATACTGTCATTAGGAATCTGTAAGTTCCTAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165971.3 |
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| 3UTR-3UTR CAA 90 bp | AGTTTCATCAATAAGGTACTTAACTCTGATTCTCCATCAGTATGCAGTTTCCATATTCGTGTGCTTCTCTaGATTCTGGTAAATACTGAA | + |
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Preference number: 3 (lower is better) Translates to: SFINKVLNSDSPSVCSFHIRVLL*ILVNTE Trigger: TTCAGTATTTACCAGAATCAAGAGAAGCACACGAAT...ATGGAAACTGCATACTGATGGAGAATCAGAGTTAAGTACCTTATTGATGAAACT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218171.2 |
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| 3UTR TCA 72 bp | AATGACAGTATATGTGTGAGAAATATGCACCTTGGCTaGCAGATCAGCCTTATACGTGAAAATATTTTTCTA | + |
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Preference number: 3 (lower is better) Translates to: NDSICVRNMHLG*QISLIRENIFL Trigger: TAGAAAAATATTTTCACGTATAAGGCTGATCTGTCAGCCAAGGTGCATATTTCTCACACATATACTGTCATT 35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000165971.3 |
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| 3UTR CAA 72 bp | AGCTGCTGCGAGGACAGTGGTGACCAGGGCGGAGTCTaGGTAGTGTTGGTAGCAGGAGCAGACAGTGCGGAA | + |
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Preference number: 4 (lower is better) Translates to: SCCEDSGDQGGV*VVLVAGADSAE Trigger: TTCCGCACTGTCTGCTCCTGCTACCAACACTACCAAGACTCCGCCCTGGTCACCACTGTCCTCGCAGCAGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218171.2 |
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| CDS-3UTR TCA 90 bp | CCCCACCTAACCCTTATGTGCTGTGAGGCTTGCTATTCGTGTGCTTCTCTTGATACGTCTCTTGAAGACTaGGGGGCTTGTTCTCTGGGC | + |
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Preference number: 4 (lower is better) Translates to: PHLTLMCCEACYSCASLDTSLED*GACSLG Trigger: GCCCAGAGAACAAGCCCCTCAGTCTTCAAGAGACGT...ATCAAGAGAAGCACACGAATAGCAAGCCTCACAGCACATAAGGGTTAGGTGGGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000218171.2 |
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| CDS-3UTR TCA 90 bp | AACATCCGGCAGCAGGAAAGTGACCAAGATCCACAGCAAGATAGGAACTTACAGACGTCTCTTGAAGACTaGGGGGCTTGTTCTCTGGGC | + |
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Preference number: 4 (lower is better) Translates to: NIRQQESDQDPQQDRNLQTSLED*GACSLG Trigger: GCCCAGAGAACAAGCCCCTCAGTCTTCAAGAGACGT...CTGTAAGTTCCTATCTTGCTGTGGATCTTGGTCACTTTCCTGCTGCCGGATGTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000165971.3 |
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| CDS-3UTR TCA 90 bp | AACATCCGGCAGCAGGAAAGTGACCAAGATCCACAGCAAGATAGGAACTTACAGTGCTCAAATTTGGCCTaGAGCTCTCTTTCCGCTTCC | + |
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Preference number: 4 (lower is better) Translates to: NIRQQESDQDPQQDRNLQCSNLA*SSLSAS Trigger: GGAAGCGGAAAGAGAGCTTCAGGCCAAATTTGAGCA...CTGTAAGTTCCTATCTTGCTGTGGATCTTGGTCACTTTCCTGCTGCCGGATGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165971.3 |
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| CDS-3UTR CCA 90 bp | AACATCCGGCAGCAGGAAAGTGACCAAGATCCACAGCAAGATAGGAACTTACAGTCCAACAACAGCAAATaGCAAATGGCCGTTCATTGC | + |
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Preference number: 4 (lower is better) Translates to: NIRQQESDQDPQQDRNLQSNNSK*QMAVHC Trigger: GCAATGAACGGCCATTTGCCATTTGCTGTTGTTGGA...CTGTAAGTTCCTATCTTGCTGTGGATCTTGGTCACTTTCCTGCTGCCGGATGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165971.3 |
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| 3UTR CAA 72 bp | GCAAAAGGAGCAAGAGCTCAATGCATACAAACAGCTTaGACTGTGATGGCCATCTGTGCTCTGGAACTCTTG | + |
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Preference number: 4 (lower is better) Translates to: AKGARAQCIQTA*TVMAICALELL Trigger: CAAGAGTTCCAGAGCACAGATGGCCATCACAGTCAAAGCTGTTTGTATGCATTGAGCTCTTGCTCCTTTTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165971.3 |
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| 3UTR CAA 72 bp | TTATGTGCTGTGAGGCTTGCTATTCGTGTGCTTCTCTaGATTCTGGTAAATACTGAAGCCCTAAGACACGGC | + |
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Preference number: 4 (lower is better) Translates to: LCAVRLAIRVLL*ILVNTEALRHG Trigger: GCCGTGTCTTAGGGCTTCAGTATTTACCAGAATCAAGAGAAGCACACGAATAGCAAGCCTCACAGCACATAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218171.2 |
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| CDS-3UTR TCA 90 bp | GATAGGAACTTACAGATTCCTAATGACAGTATATGTGTGAGAAATATGCACCTTGGCCTGTCGGAGCAATaGAGTAGAGGCACACATGGA | + |
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Preference number: 4 (lower is better) Translates to: DRNLQIPNDSICVRNMHLGLSEQ*SRGTHG Trigger: TCCATGTGTGCCTCTACTTCATTGCTCCGACAGGCC...AAGGTGCATATTTCTCACACATATACTGTCATTAGGAATCTGTAAGTTCCTATC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165971.3 |
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| CDS-3UTR TCA 90 bp | GATAGGAACTTACAGATTCCTAATGACAGTATATGTGTGAGAAATATGCACCTTACATGGACAAAAATGTaGGGATTCGAGTTCTTCAAA | + |
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Preference number: 4 (lower is better) Translates to: DRNLQIPNDSICVRNMHLTWTKM*GFEFFK Trigger: TTTGAAGAACTCGAATCCTCACATTTTTGTCCATGT...AAGGTGCATATTTCTCACACATATACTGTCATTAGGAATCTGTAAGTTCCTATC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000165971.3 |
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| CDS-3UTR CAA 90 bp | AACATCCGGCAGCAGGAAAGTGACCAAGATCCACAGCAAGATAGGAACTTACAGGGTATAATGTTCACCTaGTTGTCCAGGCTCTTCATG | + |
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Preference number: 5 (lower is better) Translates to: NIRQQESDQDPQQDRNLQGIMFT*LSRLFM Trigger: CATGAAGAGCCTGGACAACAAGGTGAACATTATACC...CTGTAAGTTCCTATCTTGCTGTGGATCTTGGTCACTTTCCTGCTGCCGGATGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165971.3 |
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| CDS-3UTR CAA 90 bp | AACATCCGGCAGCAGGAAAGTGACCAAGATCCACAGCAAGATAGGAACTTACAGATTGAAACAGAAGCCTaGCTCAATGGATCTATCGAC | + |
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Preference number: 5 (lower is better) Translates to: NIRQQESDQDPQQDRNLQIETEA*LNGSID Trigger: GTCGATAGATCCATTGAGCAAGGCTTCTGTTTCAAT...CTGTAAGTTCCTATCTTGCTGTGGATCTTGGTCACTTTCCTGCTGCCGGATGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165971.3 |
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| CDS-3UTR CAA 90 bp | TCCGGCAGCAGGAAAGTGACCAAGATCCACAGCAAGATAGGAACTTACAGATTCGAAATTGTATCTGCCTaGGCAATAAGTGGTATAATG | + |
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Preference number: 5 (lower is better) Translates to: SGSRKVTKIHSKIGTYRFEIVSA*AISGIM Trigger: CATTATACCACTTATTGCCAAGGCAGATACAATTTC...GAATCTGTAAGTTCCTATCTTGCTGTGGATCTTGGTCACTTTCCTGCTGCCGGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165971.3 |
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| CDS-3UTR CAA 90 bp | GATAGGAACTTACAGATTCCTAATGACAGTATATGTGTGAGAAATATGCACCTTATAATGTTCACCTTGTaGTCCAGGCTCTTCATGGTT | + |
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Preference number: 5 (lower is better) Translates to: DRNLQIPNDSICVRNMHLIMFTL*SRLFMV Trigger: AACCATGAAGAGCCTGGACAACAAGGTGAACATTAT...AAGGTGCATATTTCTCACACATATACTGTCATTAGGAATCTGTAAGTTCCTATC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165971.3 |
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| CDS CAA 90 bp | AAGCAGTCGCAAAAAGCTGAAGCTCCATCAGCCTTCTTTCGGTCTTaGTCCTTCCTAATGCTGCTACCTGACGCCAAAAATGACTGGTTC | + |
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Preference number: 6 (lower is better) Translates to: KQSQKAEAPSAFFRS*SFLMLLPDAKNDWF Trigger: GAACCAGTCATTTTTGGCGTCAGGTAGCAGCATTAGGAAGGACAAAGACCGAAAGAAGGCTGATGGAGCTTCAGCTTTTTGCGACTGCTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000220156.2 |
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| CDS TCA 72 bp | CAACAGCAAATGGCAAATGGCCGTTCATTGCTCCATTaGTCTTGGAGGTCGTGTCATCATCTGTTGGAAACT | + |
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Preference number: 6 (lower is better) Translates to: QQQMANGRSLLH*SWRSCHHLLET Trigger: AGTTTCCAACAGATGATGACACGACCTCCAAGATCAATGGAGCAATGAACGGCCATTTGCCATTTGCTGTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165971.3 ENSMUST00000220156.2 |
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| CDS CAA 72 bp | CAAAAAGCTGAAGCTCCATCAGCCTTCTTTCGGTCTTaGTCCTTCCTAATGCTGCTACCTGACGCCAAAAAT | + |
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Preference number: 6 (lower is better) Translates to: QKAEAPSAFFRS*SFLMLLPDAKN Trigger: ATTTTTGGCGTCAGGTAGCAGCATTAGGAAGGACAAAGACCGAAAGAAGGCTGATGGAGCTTCAGCTTTTTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000220156.2 |
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