Pregenerated sensors for SEPTIN1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000000486Ensembl transcript IDs: ENSMUST00000106313.8, ENSMUST00000106314.8, ENSMUST00000133913.8, ENSMUST00000142356.3, ENSMUST00000152267.8
Found 90 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR TCA 90 bp | GCCTACCCTCTGGATCCCCGGATTGGGCGCTGGGCTGTCCAGCGCGGGGATGGGGGATTTCCCCAGGCCTaGCTCCCCTGCCACCATGAG | + |
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Preference number: 4 (lower is better) Translates to: AYPLDPRIGRWAVQRGDGGFPQA*LPCHHE Trigger: CTCATGGTGGCAGGGGAGTCAGGCCTGGGGAAATCC...CCCATCCCCGCGCTGGACAGCCCAGCGCCCAATCCGGGGATCCAGAGGGTAGGC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt. Matches the following 1 transcripts: ENSMUST00000106314.8 |
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| CDS-3UTR TCA 90 bp | GCCTACCCTCTGGATCCCCGGATTGGGCGCTGGGCTGTCCAGCGCGGGGATGGGTCTGATTGCTCGCCCTaGGCCTGGCTCTGCTGCATC | + |
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Preference number: 4 (lower is better) Translates to: AYPLDPRIGRWAVQRGDGSDCSP*AWLCCI Trigger: GATGCAGCAGAGCCAGGCTCAGGGCGAGCAATCAGA...CCCATCCCCGCGCTGGACAGCCCAGCGCCCAATCCGGGGATCCAGAGGGTAGGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000106313.8 ENSMUST00000106314.8 |
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| CDS-3UTR CCA 90 bp | GGCCTACCCTCTGGATCCCCGGATTGGGCGCTGGGCTGTCCAGCGCGGGGATGGTGCGATGCAGCTGGTTaGGCAGGGCAGCAAAGCCCA | + |
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Preference number: 4 (lower is better) Translates to: GLPSGSPDWALGCPARGWCDAAG*AGQQSP Trigger: TGGGCTTTGCTGCCCTGCCCAACCAGCTGCATCGCA...CCATCCCCGCGCTGGACAGCCCAGCGCCCAATCCGGGGATCCAGAGGGTAGGCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106314.8 |
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| CDS-3UTR CCA 90 bp | GGCCTACCCTCTGGATCCCCGGATTGGGCGCTGGGCTGTCCAGCGCGGGGATGGGCGAGCACTGGCATCTaGCACCTGCCGATCCTCGTA | + |
|
Preference number: 4 (lower is better) Translates to: GLPSGSPDWALGCPARGWASTGI*HLPILV Trigger: TACGAGGATCGGCAGGTGCCAGATGCCAGTGCTCGC...CCATCCCCGCGCTGGACAGCCCAGCGCCCAATCCGGGGATCCAGAGGGTAGGCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000106313.8 ENSMUST00000106314.8 |
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| CDS-3UTR TCA 90 bp | GCAGGCCTACCCTCTGGATCCCCGGATTGGGCGCTGGGCTGTCCAGCGCGGGGACCCTCGGCCAAAGGGTaGGATGAAGTAGAGGCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: AGLPSGSPDWALGCPARGPSAKG*DEVEAA Trigger: TGCTGCCTCTACTTCATCTCACCCTTTGGCCGAGGG...TCCCCGCGCTGGACAGCCCAGCGCCCAATCCGGGGATCCAGAGGGTAGGCCTGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000106313.8 ENSMUST00000106314.8 |
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| CDS-3UTR TCA 90 bp | GCCTACCCTCTGGATCCCCGGATTGGGCGCTGGGCTGTCCAGCGCGGGGATGGGTTCTGCTTGAGGGCCTaGGTCTCCCTAGGCATCAGG | + |
|
Preference number: 4 (lower is better) Translates to: AYPLDPRIGRWAVQRGDGFCLRA*VSLGIR Trigger: CCTGATGCCTAGGGAGACTCAGGCCCTCAAGCAGAA...CCCATCCCCGCGCTGGACAGCCCAGCGCCCAATCCGGGGATCCAGAGGGTAGGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000106313.8 ENSMUST00000106314.8 |
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| CDS-3UTR TCA 90 bp | CAAGGGCAGGCCTACCCTCTGGATCCCCGGATTGGGCGCTGGGCTGTCCAGCGCTCTGATTGCTCGCCCTaGGCCTGGCTCTGCTGCATC | + |
|
Preference number: 4 (lower is better) Translates to: QGQAYPLDPRIGRWAVQRSDCSP*AWLCCI Trigger: GATGCAGCAGAGCCAGGCTCAGGGCGAGCAATCAGA...GCGCTGGACAGCCCAGCGCCCAATCCGGGGATCCAGAGGGTAGGCCTGCCCTTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106313.8 ENSMUST00000106314.8 |
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| CDS-3UTR CCA 90 bp | CAAGGGCAGGCCTACCCTCTGGATCCCCGGATTGGGCGCTGGGCTGTCCAGCGCCAGCCAGAGGCAACATaGGCAGCGGGATCTCTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: QGQAYPLDPRIGRWAVQRQPEAT*AAGSLW Trigger: CCACAGAGATCCCGCTGCCCATGTTGCCTCTGGCTG...GCGCTGGACAGCCCAGCGCCCAATCCGGGGATCCAGAGGGTAGGCCTGCCCTTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106313.8 ENSMUST00000106314.8 |
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| CDS-3UTR CCA 90 bp | GCAAGGGCAGGCCTACCCTCTGGATCCCCGGATTGGGCGCTGGGCTGTCCAGCGCAGCCAGAGGCAACATaGGCAGCGGGATCTCTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: ARAGLPSGSPDWALGCPAQPEAT*AAGSLW Trigger: CCACAGAGATCCCGCTGCCCATGTTGCCTCTGGCTG...CGCTGGACAGCCCAGCGCCCAATCCGGGGATCCAGAGGGTAGGCCTGCCCTTGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106313.8 ENSMUST00000106314.8 |
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| CDS-3UTR TCA 90 bp | CAGGCCTACCCTCTGGATCCCCGGATTGGGCGCTGGGCTGTCCAGCGCGGGGATTTCTGCTTGAGGGCCTaGGTCTCCCTAGGCATCAGG | + |
|
Preference number: 4 (lower is better) Translates to: QAYPLDPRIGRWAVQRGDFCLRA*VSLGIR Trigger: CCTGATGCCTAGGGAGACTCAGGCCCTCAAGCAGAA...ATCCCCGCGCTGGACAGCCCAGCGCCCAATCCGGGGATCCAGAGGGTAGGCCTG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000106313.8 ENSMUST00000106314.8 |
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| CDS-3UTR GCA 90 bp | GGCCTACCCTCTGGATCCCCGGATTGGGCGCTGGGCTGTCCAGCGCGGGGATGGTTGACAGACTTGCGATaGAGCTGGTTGGGCAGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: GLPSGSPDWALGCPARGWLTDLR*SWLGRA Trigger: TGCCCTGCCCAACCAGCTGCATCGCAAGTCTGTCAA...CCATCCCCGCGCTGGACAGCCCAGCGCCCAATCCGGGGATCCAGAGGGTAGGCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106314.8 |
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| CDS-3UTR CCA 90 bp | AGGCCTACCCTCTGGATCCCCGGATTGGGCGCTGGGCTGTCCAGCGCGGGGATGGACTTGCGATGCAGCTaGTTGGGCAGGGCAGCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: RPTLWIPGLGAGLSSAGMDLRCS*LGRAAK Trigger: CTTTGCTGCCCTGCCCAACCAGCTGCATCGCAAGTC...CATCCCCGCGCTGGACAGCCCAGCGCCCAATCCGGGGATCCAGAGGGTAGGCCT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106314.8 |
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| CDS-3UTR CCA 90 bp | TGCAAGGGCAGGCCTACCCTCTGGATCCCCGGATTGGGCGCTGGGCTGTCCAGCGCGAGCACTGGCATCTaGCACCTGCCGATCCTCGTA | + |
|
Preference number: 4 (lower is better) Translates to: CKGRPTLWIPGLGAGLSSASTGI*HLPILV Trigger: TACGAGGATCGGCAGGTGCCAGATGCCAGTGCTCGC...GCTGGACAGCCCAGCGCCCAATCCGGGGATCCAGAGGGTAGGCCTGCCCTTGCA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106313.8 ENSMUST00000106314.8 |
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| CDS-3UTR CCA 90 bp | GCAAGGGCAGGCCTACCCTCTGGATCCCCGGATTGGGCGCTGGGCTGTCCAGCGGCAGCGGGATCTCTGTaGCACTTTGCCGGGAAAGCT | + |
|
Preference number: 4 (lower is better) Translates to: ARAGLPSGSPDWALGCPAAAGSL*HFAGKA Trigger: AGCTTTCCCGGCAAAGTGCCACAGAGATCCCGCTGC...CGCTGGACAGCCCAGCGCCCAATCCGGGGATCCAGAGGGTAGGCCTGCCCTTGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106313.8 ENSMUST00000106314.8 |
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| CDS-3UTR CCA 90 bp | AGGCCTACCCTCTGGATCCCCGGATTGGGCGCTGGGCTGTCCAGCGCGGGGATGGCAGCGGGATCTCTGTaGCACTTTGCCGGGAAAGCT | + |
|
Preference number: 4 (lower is better) Translates to: RPTLWIPGLGAGLSSAGMAAGSL*HFAGKA Trigger: AGCTTTCCCGGCAAAGTGCCACAGAGATCCCGCTGC...CATCCCCGCGCTGGACAGCCCAGCGCCCAATCCGGGGATCCAGAGGGTAGGCCT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000106313.8 ENSMUST00000106314.8 |
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| CDS-3UTR GCA 90 bp | CAAGGGCAGGCCTACCCTCTGGATCCCCGGATTGGGCGCTGGGCTGTCCAGCGCGACTTTCTCGTGCACTaGCCGGAGGAAAGCCACATC | + |
|
Preference number: 4 (lower is better) Translates to: QGQAYPLDPRIGRWAVQRDFLVH*PEESHI Trigger: GATGTGGCTTTCCTCCGGGCAGTGCACGAGAAAGTC...GCGCTGGACAGCCCAGCGCCCAATCCGGGGATCCAGAGGGTAGGCCTGCCCTTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106313.8 ENSMUST00000106314.8 |
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| CDS-3UTR GCA 90 bp | CAGGCCTACCCTCTGGATCCCCGGATTGGGCGCTGGGCTGTCCAGCGCGGGGATATCTCTGTGGCACTTTaGCGGGAAAGCTTGCTGCGG | + |
|
Preference number: 4 (lower is better) Translates to: QAYPLDPRIGRWAVQRGDISVAL*RESLLR Trigger: CCGCAGCAAGCTTTCCCGGCAAAGTGCCACAGAGAT...ATCCCCGCGCTGGACAGCCCAGCGCCCAATCCGGGGATCCAGAGGGTAGGCCTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000106313.8 ENSMUST00000106314.8 |
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| CDS-3UTR GCA 90 bp | AGGGCAGGCCTACCCTCTGGATCCCCGGATTGGGCGCTGGGCTGTCCAGCGCGGTTCTCCAGCATTTCTTaGATGCGGCGCAGCTCTTCG | + |
|
Preference number: 4 (lower is better) Translates to: RAGLPSGSPDWALGCPARFSSIS*MRRSSS Trigger: CGAAGAGCTGCGCCGCATGCAAGAAATGCTGGAGAA...CCGCGCTGGACAGCCCAGCGCCCAATCCGGGGATCCAGAGGGTAGGCCTGCCCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106313.8 ENSMUST00000106314.8 |
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| CDS-3UTR CCA 90 bp | AGGGCAGGCCTACCCTCTGGATCCCCGGATTGGGCGCTGGGCTGTCCAGCGCGGGAAATCGCAGTGATGTaGGTTCTCCACCTCCACGGT | + |
|
Preference number: 4 (lower is better) Translates to: RAGLPSGSPDWALGCPAREIAVM*VLHLHG Trigger: ACCGTGGAGGTGGAGAACCCACATCACTGCGATTTC...CCGCGCTGGACAGCCCAGCGCCCAATCCGGGGATCCAGAGGGTAGGCCTGCCCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106313.8 ENSMUST00000106314.8 |
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| CDS-3UTR TCA 90 bp | GCCTACCCTCTGGATCCCCGGATTGGGCGCTGGGCTGTCCAGCGCGGGGATGGGAGTCAAACCCCTTCTTaGCAGACTTGCGATGCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: AYPLDPRIGRWAVQRGDGSQTPS*QTCDAA Trigger: AGCTGCATCGCAAGTCTGTCAAGAAGGGGTTTGACT...CCCATCCCCGCGCTGGACAGCCCAGCGCCCAATCCGGGGATCCAGAGGGTAGGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000106314.8 |
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| CDS-3UTR TCA 90 bp | GCCTACCCTCTGGATCCCCGGATTGGGCGCTGGGCTGTCCAGCGCGGGGATGGGAGCCACTCTCATCCCTaGGGTATTGCTCAAACTGCT | + |
|
Preference number: 4 (lower is better) Translates to: AYPLDPRIGRWAVQRGDGSHSHP*GIAQTA Trigger: AGCAGTTTGAGCAATACCTCAGGGATGAGAGTGGCT...CCCATCCCCGCGCTGGACAGCCCAGCGCCCAATCCGGGGATCCAGAGGGTAGGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000106313.8 ENSMUST00000106314.8 |
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| CDS-3UTR TCA 90 bp | GGCCTACCCTCTGGATCCCCGGATTGGGCGCTGGGCTGTCCAGCGCGGGGATGGAGCCACTCTCATCCCTaGGGTATTGCTCAAACTGCT | + |
|
Preference number: 4 (lower is better) Translates to: GLPSGSPDWALGCPARGWSHSHP*GIAQTA Trigger: AGCAGTTTGAGCAATACCTCAGGGATGAGAGTGGCT...CCATCCCCGCGCTGGACAGCCCAGCGCCCAATCCGGGGATCCAGAGGGTAGGCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000106313.8 ENSMUST00000106314.8 |
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| CDS-3UTR TCA 90 bp | AAGGGCAGGCCTACCCTCTGGATCCCCGGATTGGGCGCTGGGCTGTCCAGCGCGTTCAGGAAATCGCAGTaGTGTGGGTTCTCCACCTCC | + |
|
Preference number: 4 (lower is better) Translates to: KGRPTLWIPGLGAGLSSAFRKSQ*CGFSTS Trigger: GGAGGTGGAGAACCCACATCACTGCGATTTCCTGAA...CGCGCTGGACAGCCCAGCGCCCAATCCGGGGATCCAGAGGGTAGGCCTGCCCTT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106313.8 ENSMUST00000106314.8 |
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| CDS-3UTR GCA 90 bp | AGGGCAGGCCTACCCTCTGGATCCCCGGATTGGGCGCTGGGCTGTCCAGCGCGGATATTGACTTTCTCGTaGACTGCCCGGAGGAAAGCC | + |
|
Preference number: 4 (lower is better) Translates to: RAGLPSGSPDWALGCPARILTFS*TARRKA Trigger: GGCTTTCCTCCGGGCAGTGCACGAGAAAGTCAATAT...CCGCGCTGGACAGCCCAGCGCCCAATCCGGGGATCCAGAGGGTAGGCCTGCCCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106313.8 ENSMUST00000106314.8 |
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| CDS-3UTR GCA 90 bp | GTGCAAGGGCAGGCCTACCCTCTGGATCCCCGGATTGGGCGCTGGGCTGTCCAGATCTCTGTGGCACTTTaGCGGGAAAGCTTGCTGCGG | + |
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Preference number: 4 (lower is better) Translates to: VQGQAYPLDPRIGRWAVQISVAL*RESLLR Trigger: CCGCAGCAAGCTTTCCCGGCAAAGTGCCACAGAGAT...CTGGACAGCCCAGCGCCCAATCCGGGGATCCAGAGGGTAGGCCTGCCCTTGCAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106314.8 |
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| CDS-3UTR GCA 90 bp | AAGGGCAGGCCTACCCTCTGGATCCCCGGATTGGGCGCTGGGCTGTCCAGCGCGTTCTCCAGCATTTCTTaGATGCGGCGCAGCTCTTCG | + |
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Preference number: 4 (lower is better) Translates to: KGRPTLWIPGLGAGLSSAFSSIS*MRRSSS Trigger: CGAAGAGCTGCGCCGCATGCAAGAAATGCTGGAGAA...CGCGCTGGACAGCCCAGCGCCCAATCCGGGGATCCAGAGGGTAGGCCTGCCCTT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106313.8 ENSMUST00000106314.8 |
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| CDS-3UTR CCA 90 bp | GCAAGGGCAGGCCTACCCTCTGGATCCCCGGATTGGGCGCTGGGCTGTCCAGCGGAAATCGCAGTGATGTaGGTTCTCCACCTCCACGGT | + |
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Preference number: 4 (lower is better) Translates to: ARAGLPSGSPDWALGCPAEIAVM*VLHLHG Trigger: ACCGTGGAGGTGGAGAACCCACATCACTGCGATTTC...CGCTGGACAGCCCAGCGCCCAATCCGGGGATCCAGAGGGTAGGCCTGCCCTTGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106313.8 ENSMUST00000106314.8 |
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| CDS-3UTR GCA 90 bp | CAAGGGCAGGCCTACCCTCTGGATCCCCGGATTGGGCGCTGGGCTGTCCAGCGCATATTGACTTTCTCGTaGACTGCCCGGAGGAAAGCC | + |
|
Preference number: 4 (lower is better) Translates to: QGQAYPLDPRIGRWAVQRILTFS*TARRKA Trigger: GGCTTTCCTCCGGGCAGTGCACGAGAAAGTCAATAT...GCGCTGGACAGCCCAGCGCCCAATCCGGGGATCCAGAGGGTAGGCCTGCCCTTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106313.8 ENSMUST00000106314.8 |
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| CDS-3UTR GCA 90 bp | GGCCTACCCTCTGGATCCCCGGATTGGGCGCTGGGCTGTCCAGCGCGGGGATGGTGCTGCATCTGGGCTTaGATCTTCTCCAGCATTTCT | + |
|
Preference number: 4 (lower is better) Translates to: GLPSGSPDWALGCPARGWCCIWA*IFSSIS Trigger: AGAAATGCTGGAGAAGATGCAAGCCCAGATGCAGCA...CCATCCCCGCGCTGGACAGCCCAGCGCCCAATCCGGGGATCCAGAGGGTAGGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000106313.8 ENSMUST00000106314.8 |
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| CDS-3UTR GCA 90 bp | GGCCTACCCTCTGGATCCCCGGATTGGGCGCTGGGCTGTCCAGCGCGGGGATGGAGGTATTGCTCAAACTaGTCCTCAATGAAGCGAACC | + |
|
Preference number: 4 (lower is better) Translates to: GLPSGSPDWALGCPARGWRYCSN*SSMKRT Trigger: GGTTCGCTTCATTGAGGAGCAGTTTGAGCAATACCT...CCATCCCCGCGCTGGACAGCCCAGCGCCCAATCCGGGGATCCAGAGGGTAGGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000106313.8 ENSMUST00000106314.8 |
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| CDS-3UTR GCA 90 bp | GGCCTACCCTCTGGATCCCCGGATTGGGCGCTGGGCTGTCCAGCGCGGGGATGGTCATCCCTGAGGTATTaGTCAAACTGCTCCTCAATG | + |
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Preference number: 4 (lower is better) Translates to: GLPSGSPDWALGCPARGWSSLRY*SNCSSM Trigger: CATTGAGGAGCAGTTTGAGCAATACCTCAGGGATGA...CCATCCCCGCGCTGGACAGCCCAGCGCCCAATCCGGGGATCCAGAGGGTAGGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000106313.8 ENSMUST00000106314.8 |
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| CDS-3UTR GCA 90 bp | GCCTACCCTCTGGATCCCCGGATTGGGCGCTGGGCTGTCCAGCGCGGGGATGGGACAAGACCCAACGACTaGGAAAGGGATGTTTTCCTT | + |
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Preference number: 4 (lower is better) Translates to: AYPLDPRIGRWAVQRGDGTRPND*ERDVFL Trigger: AAGGAAAACATCCCTTTCGCAGTCGTTGGGTCTTGT...CCCATCCCCGCGCTGGACAGCCCAGCGCCCAATCCGGGGATCCAGAGGGTAGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000106313.8 ENSMUST00000106314.8 |
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| CDS-3UTR GCA 90 bp | AGGCCTACCCTCTGGATCCCCGGATTGGGCGCTGGGCTGTCCAGCGCGGGGATGTGCTGCATCTGGGCTTaGATCTTCTCCAGCATTTCT | + |
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Preference number: 4 (lower is better) Translates to: RPTLWIPGLGAGLSSAGMCCIWA*IFSSIS Trigger: AGAAATGCTGGAGAAGATGCAAGCCCAGATGCAGCA...CATCCCCGCGCTGGACAGCCCAGCGCCCAATCCGGGGATCCAGAGGGTAGGCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000106313.8 ENSMUST00000106314.8 |
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| CDS-3UTR CCA 90 bp | TGCAAGGGCAGGCCTACCCTCTGGATCCCCGGATTGGGCGCTGGGCTGTCCAGCGGCAGCAATGGACTCTaGAATCCTGGATGTTCTTCC | + |
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Preference number: 4 (lower is better) Translates to: CKGRPTLWIPGLGAGLSSGSNGL*NPGCSS Trigger: GGAAGAACATCCAGGATTCCAGAGTCCATTGCTGCC...GCTGGACAGCCCAGCGCCCAATCCGGGGATCCAGAGGGTAGGCCTGCCCTTGCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106313.8 ENSMUST00000106314.8 |
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| CDS-3UTR TCA 90 bp | GCAGGCCTACCCTCTGGATCCCCGGATTGGGCGCTGGGCTGTCCAGCGCGGGGAGGAACTGATAGATGTTaGTCTCCTCCTCTTTCAACT | + |
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Preference number: 4 (lower is better) Translates to: AGLPSGSPDWALGCPARGGTDRC*SPPLST Trigger: AGTTGAAAGAGGAGGAGATCAACATCTATCAGTTCC...TCCCCGCGCTGGACAGCCCAGCGCCCAATCCGGGGATCCAGAGGGTAGGCCTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000106313.8 ENSMUST00000106314.8 |
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| CDS-3UTR GCA 90 bp | AGGCCTACCCTCTGGATCCCCGGATTGGGCGCTGGGCTGTCCAGCGCGGGGATGTCATCCCTGAGGTATTaGTCAAACTGCTCCTCAATG | + |
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Preference number: 4 (lower is better) Translates to: RPTLWIPGLGAGLSSAGMSSLRY*SNCSSM Trigger: CATTGAGGAGCAGTTTGAGCAATACCTCAGGGATGA...CATCCCCGCGCTGGACAGCCCAGCGCCCAATCCGGGGATCCAGAGGGTAGGCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000106313.8 ENSMUST00000106314.8 |
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| CDS-3UTR GCA 90 bp | CAGGCCTACCCTCTGGATCCCCGGATTGGGCGCTGGGCTGTCCAGCGCGGGGATACAAGACCCAACGACTaGGAAAGGGATGTTTTCCTT | + |
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Preference number: 4 (lower is better) Translates to: QAYPLDPRIGRWAVQRGDTRPND*ERDVFL Trigger: AAGGAAAACATCCCTTTCGCAGTCGTTGGGTCTTGT...ATCCCCGCGCTGGACAGCCCAGCGCCCAATCCGGGGATCCAGAGGGTAGGCCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000106313.8 ENSMUST00000106314.8 |
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| CDS-3UTR CCA 90 bp | CAAGGGCAGGCCTACCCTCTGGATCCCCGGATTGGGCGCTGGGCTGTCCAGCGCTGGACTCTGGAATCCTaGATGTTCTTCCTGTTCAAG | + |
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Preference number: 4 (lower is better) Translates to: QGQAYPLDPRIGRWAVQRWTLES*MFFLFK Trigger: CTTGAACAGGAAGAACATCCAGGATTCCAGAGTCCA...GCGCTGGACAGCCCAGCGCCCAATCCGGGGATCCAGAGGGTAGGCCTGCCCTTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106313.8 ENSMUST00000106314.8 |
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| CDS-3UTR TCA 90 bp | AAGGGCAGGCCTACCCTCTGGATCCCCGGATTGGGCGCTGGGCTGTCCAGCGCGGGAACTGATAGATGTTaGTCTCCTCCTCTTTCAACT | + |
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Preference number: 4 (lower is better) Translates to: KGRPTLWIPGLGAGLSSAGTDRC*SPPLST Trigger: AGTTGAAAGAGGAGGAGATCAACATCTATCAGTTCC...CGCGCTGGACAGCCCAGCGCCCAATCCGGGGATCCAGAGGGTAGGCCTGCCCTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106313.8 ENSMUST00000106314.8 |
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| CDS-3UTR GCA 90 bp | TGCAAGGGCAGGCCTACCCTCTGGATCCCCGGATTGGGCGCTGGGCTGTCCAGCAGGTATTGCTCAAACTaGTCCTCAATGAAGCGAACC | + |
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Preference number: 4 (lower is better) Translates to: CKGRPTLWIPGLGAGLSSRYCSN*SSMKRT Trigger: GGTTCGCTTCATTGAGGAGCAGTTTGAGCAATACCT...GCTGGACAGCCCAGCGCCCAATCCGGGGATCCAGAGGGTAGGCCTGCCCTTGCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106313.8 ENSMUST00000106314.8 |
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| CDS-3UTR CCA 90 bp | AGGGCAGGCCTACCCTCTGGATCCCCGGATTGGGCGCTGGGCTGTCCAGCGCGGATCAGAGTCACACTCTaGGAACTGATAGATGTTGAT | + |
|
Preference number: 4 (lower is better) Translates to: RAGLPSGSPDWALGCPARIRVTL*ELIDVD Trigger: ATCAACATCTATCAGTTCCCAGAGTGTGACTCTGAT...CCGCGCTGGACAGCCCAGCGCCCAATCCGGGGATCCAGAGGGTAGGCCTGCCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106313.8 ENSMUST00000106314.8 |
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| CDS-3UTR CCA 90 bp | GCCTACCCTCTGGATCCCCGGATTGGGCGCTGGGCTGTCCAGCGCGGGGATGGGATCAGAGTCACACTCTaGGAACTGATAGATGTTGAT | + |
|
Preference number: 4 (lower is better) Translates to: AYPLDPRIGRWAVQRGDGIRVTL*ELIDVD Trigger: ATCAACATCTATCAGTTCCCAGAGTGTGACTCTGAT...CCCATCCCCGCGCTGGACAGCCCAGCGCCCAATCCGGGGATCCAGAGGGTAGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000106313.8 ENSMUST00000106314.8 |
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| CDS-3UTR GCA 90 bp | AGGGCAGGCCTACCCTCTGGATCCCCGGATTGGGCGCTGGGCTGTCCAGCGCGGTTCATTTCTTCATTCTaGTTCTTGAATTCTTCGTCC | + |
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Preference number: 4 (lower is better) Translates to: RAGLPSGSPDWALGCPARFISSF*FLNSSS Trigger: GGACGAAGAATTCAAGAAGCAGAATGAAGAAATGAA...CCGCGCTGGACAGCCCAGCGCCCAATCCGGGGATCCAGAGGGTAGGCCTGCCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106313.8 ENSMUST00000106314.8 |
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| CDS-3UTR GCA 90 bp | AGGCCTACCCTCTGGATCCCCGGATTGGGCGCTGGGCTGTCCAGCGCGGGGATGTTCATTTCTTCATTCTaGTTCTTGAATTCTTCGTCC | + |
|
Preference number: 4 (lower is better) Translates to: RPTLWIPGLGAGLSSAGMFISSF*FLNSSS Trigger: GGACGAAGAATTCAAGAAGCAGAATGAAGAAATGAA...CATCCCCGCGCTGGACAGCCCAGCGCCCAATCCGGGGATCCAGAGGGTAGGCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000106313.8 ENSMUST00000106314.8 |
||
| CDS-3UTR CAA 90 bp | CAAGGGCAGGCCTACCCTCTGGATCCCCGGATTGGGCGCTGGGCTGTCCAGCGCTTGCGATGCAGCTGGTaGGGCAGGGCAGCAAAGCCC | + |
|
Preference number: 5 (lower is better) Translates to: QGQAYPLDPRIGRWAVQRLRCSW*GRAAKP Trigger: GGGCTTTGCTGCCCTGCCCAACCAGCTGCATCGCAA...GCGCTGGACAGCCCAGCGCCCAATCCGGGGATCCAGAGGGTAGGCCTGCCCTTG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106314.8 |
||
| CDS-3UTR CAA 90 bp | CAAGGGCAGGCCTACCCTCTGGATCCCCGGATTGGGCGCTGGGCTGTCCAGCGCGATCTCTGTGGCACTTaGCCGGGAAAGCTTGCTGCG | + |
|
Preference number: 5 (lower is better) Translates to: QGQAYPLDPRIGRWAVQRDLCGT*PGKLAA Trigger: CGCAGCAAGCTTTCCCGGCAAAGTGCCACAGAGATC...GCGCTGGACAGCCCAGCGCCCAATCCGGGGATCCAGAGGGTAGGCCTGCCCTTG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106313.8 ENSMUST00000106314.8 |
||
| CDS-3UTR CAA 90 bp | GTGCAAGGGCAGGCCTACCCTCTGGATCCCCGGATTGGGCGCTGGGCTGTCCAGCCCTTCTTGACAGACTaGCGATGCAGCTGGTTGGGC | + |
|
Preference number: 5 (lower is better) Translates to: VQGQAYPLDPRIGRWAVQPFLTD*RCSWLG Trigger: GCCCAACCAGCTGCATCGCAAGTCTGTCAAGAAGGG...CTGGACAGCCCAGCGCCCAATCCGGGGATCCAGAGGGTAGGCCTGCCCTTGCAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106314.8 |
||
| CDS-3UTR CAA 90 bp | GGCCTACCCTCTGGATCCCCGGATTGGGCGCTGGGCTGTCCAGCGCGGGGATGGGTGAGGAACAAGCTGTaGATGAGGGTGGATTTCCCC | + |
|
Preference number: 5 (lower is better) Translates to: GLPSGSPDWALGCPARGWVRNKL*MRVDFP Trigger: GGGGAAATCCACCCTCATCAACAGCTTGTTCCTCAC...CCATCCCCGCGCTGGACAGCCCAGCGCCCAATCCGGGGATCCAGAGGGTAGGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000106313.8 ENSMUST00000106314.8 |
||
| CDS-3UTR CAA 90 bp | TGCAAGGGCAGGCCTACCCTCTGGATCCCCGGATTGGGCGCTGGGCTGTCCAGCGATCTCTGTGGCACTTaGCCGGGAAAGCTTGCTGCG | + |
|
Preference number: 5 (lower is better) Translates to: CKGRPTLWIPGLGAGLSSDLCGT*PGKLAA Trigger: CGCAGCAAGCTTTCCCGGCAAAGTGCCACAGAGATC...GCTGGACAGCCCAGCGCCCAATCCGGGGATCCAGAGGGTAGGCCTGCCCTTGCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106313.8 ENSMUST00000106314.8 |
||
| CDS-3UTR CAA 90 bp | GCCTACCCTCTGGATCCCCGGATTGGGCGCTGGGCTGTCCAGCGCGGGGATGGGAAGTCAAACCCCTTCTaGACAGACTTGCGATGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: AYPLDPRIGRWAVQRGDGKSNPF*TDLRCS Trigger: GCTGCATCGCAAGTCTGTCAAGAAGGGGTTTGACTT...CCCATCCCCGCGCTGGACAGCCCAGCGCCCAATCCGGGGATCCAGAGGGTAGGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000106314.8 |
||
| CDS-3UTR CAA 90 bp | AGGCCTACCCTCTGGATCCCCGGATTGGGCGCTGGGCTGTCCAGCGCGGGGATGGTGAGGAACAAGCTGTaGATGAGGGTGGATTTCCCC | + |
|
Preference number: 5 (lower is better) Translates to: RPTLWIPGLGAGLSSAGMVRNKL*MRVDFP Trigger: GGGGAAATCCACCCTCATCAACAGCTTGTTCCTCAC...CATCCCCGCGCTGGACAGCCCAGCGCCCAATCCGGGGATCCAGAGGGTAGGCCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000106313.8 ENSMUST00000106314.8 |
||
| CDS-3UTR CAA 90 bp | GCAAGGGCAGGCCTACCCTCTGGATCCCCGGATTGGGCGCTGGGCTGTCCAGCGCTGCTGCATCTGGGCTaGCATCTTCTCCAGCATTTC | + |
|
Preference number: 5 (lower is better) Translates to: ARAGLPSGSPDWALGCPALLHLG*HLLQHF Trigger: GAAATGCTGGAGAAGATGCAAGCCCAGATGCAGCAG...CGCTGGACAGCCCAGCGCCCAATCCGGGGATCCAGAGGGTAGGCCTGCCCTTGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106313.8 ENSMUST00000106314.8 |
||
| CDS-3UTR CAA 90 bp | GCAGGCCTACCCTCTGGATCCCCGGATTGGGCGCTGGGCTGTCCAGCGCGGGGAAAGGTCAACTTCACCTaGATACCTCCCTCCTCAATC | + |
|
Preference number: 5 (lower is better) Translates to: AGLPSGSPDWALGCPARGKVNFT*IPPSSI Trigger: GATTGAGGAGGGAGGTATCAAGGTGAAGTTGACCTT...TCCCCGCGCTGGACAGCCCAGCGCCCAATCCGGGGATCCAGAGGGTAGGCCTGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000106313.8 ENSMUST00000106314.8 |
||
| CDS-3UTR CAA 90 bp | GGCCTACCCTCTGGATCCCCGGATTGGGCGCTGGGCTGTCCAGCGCGGGGATGGCTCATCCCTGAGGTATaGCTCAAACTGCTCCTCAAT | + |
|
Preference number: 5 (lower is better) Translates to: GLPSGSPDWALGCPARGWLIPEV*LKLLLN Trigger: ATTGAGGAGCAGTTTGAGCAATACCTCAGGGATGAG...CCATCCCCGCGCTGGACAGCCCAGCGCCCAATCCGGGGATCCAGAGGGTAGGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000106313.8 ENSMUST00000106314.8 |
||
| CDS-3UTR CAA 90 bp | AAGGGCAGGCCTACCCTCTGGATCCCCGGATTGGGCGCTGGGCTGTCCAGCGCGATGACCGGGATGATATaGACTTTCTCGTGCACTGCC | + |
|
Preference number: 5 (lower is better) Translates to: KGRPTLWIPGLGAGLSSAMTGMI*TFSCTA Trigger: GGCAGTGCACGAGAAAGTCAATATCATCCCGGTCAT...CGCGCTGGACAGCCCAGCGCCCAATCCGGGGATCCAGAGGGTAGGCCTGCCCTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106313.8 ENSMUST00000106314.8 |
||
| CDS-3UTR CAA 90 bp | CAAGGGCAGGCCTACCCTCTGGATCCCCGGATTGGGCGCTGGGCTGTCCAGCGCATGACCGGGATGATATaGACTTTCTCGTGCACTGCC | + |
|
Preference number: 5 (lower is better) Translates to: QGQAYPLDPRIGRWAVQRMTGMI*TFSCTA Trigger: GGCAGTGCACGAGAAAGTCAATATCATCCCGGTCAT...GCGCTGGACAGCCCAGCGCCCAATCCGGGGATCCAGAGGGTAGGCCTGCCCTTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106313.8 ENSMUST00000106314.8 |
||
| CDS-3UTR CAA 90 bp | TGCAAGGGCAGGCCTACCCTCTGGATCCCCGGATTGGGCGCTGGGCTGTCCAGCCTGCTGCATCTGGGCTaGCATCTTCTCCAGCATTTC | + |
|
Preference number: 5 (lower is better) Translates to: CKGRPTLWIPGLGAGLSSLLHLG*HLLQHF Trigger: GAAATGCTGGAGAAGATGCAAGCCCAGATGCAGCAG...GCTGGACAGCCCAGCGCCCAATCCGGGGATCCAGAGGGTAGGCCTGCCCTTGCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106313.8 ENSMUST00000106314.8 |
||
| CDS CCA 90 bp | ACTTTTCAGTGTCAGCCAGAGGCAACATGGGCAGCGGGATCTCTGTaGCACTTTGCCGGGAAAGCTTGCTGCGGCTGGCTCGATCCCGGG | + |
|
Preference number: 5 (lower is better) Translates to: TFQCQPEATWAAGSL*HFAGKACCGWLDPG Trigger: CCCGGGATCGAGCCAGCCGCAGCAAGCTTTCCCGGCAAAGTGCCACAGAGATCCCGCTGCCCATGTTGCCTCTGGCTGACACTGAAAAGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000106313.8 ENSMUST00000106314.8 ENSMUST00000152267.8 |
||
| CDS-3UTR CAA 90 bp | CAGGCCTACCCTCTGGATCCCCGGATTGGGCGCTGGGCTGTCCAGCGCGGGGATAAGGTCAACTTCACCTaGATACCTCCCTCCTCAATC | + |
|
Preference number: 5 (lower is better) Translates to: QAYPLDPRIGRWAVQRGDKVNFT*IPPSSI Trigger: GATTGAGGAGGGAGGTATCAAGGTGAAGTTGACCTT...ATCCCCGCGCTGGACAGCCCAGCGCCCAATCCGGGGATCCAGAGGGTAGGCCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000106313.8 ENSMUST00000106314.8 |
||
| CDS-3UTR CAA 90 bp | CAGGCCTACCCTCTGGATCCCCGGATTGGGCGCTGGGCTGTCCAGCGCGGGGATCTCATCCCTGAGGTATaGCTCAAACTGCTCCTCAAT | + |
|
Preference number: 5 (lower is better) Translates to: QAYPLDPRIGRWAVQRGDLIPEV*LKLLLN Trigger: ATTGAGGAGCAGTTTGAGCAATACCTCAGGGATGAG...ATCCCCGCGCTGGACAGCCCAGCGCCCAATCCGGGGATCCAGAGGGTAGGCCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000106313.8 ENSMUST00000106314.8 |
||
| CDS GCA 90 bp | AGGGCGTCTGCTTTACCGATGACCGGGATGATATTGACTTTCTCGTaGACTGCCCGGAGGAAAGCCACATCTAGGGGCCGGAGCCCTCGG | + |
|
Preference number: 5 (lower is better) Translates to: RASALPMTGMILTFS*TARRKATSRGRSPR Trigger: CCGAGGGCTCCGGCCCCTAGATGTGGCTTTCCTCCGGGCAGTGCACGAGAAAGTCAATATCATCCCGGTCATCGGTAAAGCAGACGCCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000106313.8 ENSMUST00000106314.8 ENSMUST00000142356.3 ENSMUST00000152267.8 |
||
| CDS-3UTR CAA 90 bp | GCAGGCCTACCCTCTGGATCCCCGGATTGGGCGCTGGGCTGTCCAGCGCGGGGATCTTCATTCTGCTTCTaGAATTCTTCGTCCTCATCA | + |
|
Preference number: 5 (lower is better) Translates to: AGLPSGSPDWALGCPARGSSFCF*NSSSSS Trigger: TGATGAGGACGAAGAATTCAAGAAGCAGAATGAAGA...TCCCCGCGCTGGACAGCCCAGCGCCCAATCCGGGGATCCAGAGGGTAGGCCTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000106313.8 ENSMUST00000106314.8 |
||
| CDS-3UTR CAA 90 bp | AGGGCAGGCCTACCCTCTGGATCCCCGGATTGGGCGCTGGGCTGTCCAGCGCGGTCTTCATTCTGCTTCTaGAATTCTTCGTCCTCATCA | + |
|
Preference number: 5 (lower is better) Translates to: RAGLPSGSPDWALGCPARSSFCF*NSSSSS Trigger: TGATGAGGACGAAGAATTCAAGAAGCAGAATGAAGA...CCGCGCTGGACAGCCCAGCGCCCAATCCGGGGATCCAGAGGGTAGGCCTGCCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106313.8 ENSMUST00000106314.8 |
||
| CDS TCA 90 bp | CTCAAACTGCTCCTCAATGAAGCGAACCACAGGCAGCCAGCAGTCTaGGCAGTCCACAGAGTCCCCAAAGCCAGGCGTGTCCACCAAGGT | + |
|
Preference number: 5 (lower is better) Translates to: LKLLLNEANHRQPAV*AVHRVPKARRVHQG Trigger: ACCTTGGTGGACACGCCTGGCTTTGGGGACTCTGTGGACTGCTCAGACTGCTGGCTGCCTGTGGTTCGCTTCATTGAGGAGCAGTTTGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000106313.8 ENSMUST00000106314.8 ENSMUST00000133913.8 ENSMUST00000142356.3 ENSMUST00000152267.8 |
||
| CDS TCA 90 bp | ATCTCCTCCTCTTTCAACTGGTCCCGGATCTTCTGCTTGAGGGCCTaGGTCTCCCTAGGCATCAGGGCGTCTGCTTTACCGATGACCGGG | + |
|
Preference number: 5 (lower is better) Translates to: ISSSFNWSRIFCLRA*VSLGIRASALPMTG Trigger: CCCGGTCATCGGTAAAGCAGACGCCCTGATGCCTAGGGAGACTCAGGCCCTCAAGCAGAAGATCCGGGACCAGTTGAAAGAGGAGGAGAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000106313.8 ENSMUST00000106314.8 ENSMUST00000142356.3 |
||
| CDS TCA 90 bp | GACCCAACGACTGCGAAAGGGATGTTTTCCTTCTGCTTGAGGGCCTaGGTCTCCCTAGGCATCAGGGCGTCTGCTTTACCGATGACCGGG | + |
|
Preference number: 5 (lower is better) Translates to: DPTTAKGMFSFCLRA*VSLGIRASALPMTG Trigger: CCCGGTCATCGGTAAAGCAGACGCCCTGATGCCTAGGGAGACTCAGGCCCTCAAGCAGAAGGAAAACATCCCTTTCGCAGTCGTTGGGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152267.8 |
||
| CDS CCA 90 bp | CGTCCTTCTCGCGAATCAACTTTTCAGTGTCAGCCAGAGGCAACATaGGCAGCGGGATCTCTGTGGCACTTTGCCGGGAAAGCTTGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: RPSRESTFQCQPEAT*AAGSLWHFAGKACC Trigger: GCAGCAAGCTTTCCCGGCAAAGTGCCACAGAGATCCCGCTGCCCATGTTGCCTCTGGCTGACACTGAAAAGTTGATTCGCGAGAAGGACG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000106313.8 ENSMUST00000106314.8 ENSMUST00000152267.8 |
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| CDS GCA 90 bp | CACTGGTCGGGTTCCATCCCTCACCACTTCACAAGACCCAACGACTaGGAAAGGGATGTTTTCCTTCTGCTTGAGGGCCTGAGTCTCCCT | + |
|
Preference number: 5 (lower is better) Translates to: HWSGSIPHHFTRPND*ERDVFLLLEGLSLP Trigger: AGGGAGACTCAGGCCCTCAAGCAGAAGGAAAACATCCCTTTCGCAGTCGTTGGGTCTTGTGAAGTGGTGAGGGATGGAACCCGACCAGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152267.8 |
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| CDS GCA 90 bp | GATCTTCTGCTTGAGGGCCTGAGTCTCCCTAGGCATCAGGGCGTCTaGTTTACCGATGACCGGGATGATATTGACTTTCTCGTGCACTGC | + |
|
Preference number: 5 (lower is better) Translates to: DLLLEGLSLPRHQGV*FTDDRDDIDFLVHC Trigger: GCAGTGCACGAGAAAGTCAATATCATCCCGGTCATCGGTAAAGCAGACGCCCTGATGCCTAGGGAGACTCAGGCCCTCAAGCAGAAGATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000106313.8 ENSMUST00000106314.8 ENSMUST00000142356.3 |
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| CDS GCA 90 bp | TTCTTCCTGTTCAAGCCACTCTCATCCCTGAGGTATTGCTCAAACTaGTCCTCAATGAAGCGAACCACAGGCAGCCAGCAGTCTGAGCAG | + |
|
Preference number: 5 (lower is better) Translates to: FFLFKPLSSLRYCSN*SSMKRTTGSQQSEQ Trigger: CTGCTCAGACTGCTGGCTGCCTGTGGTTCGCTTCATTGAGGAGCAGTTTGAGCAATACCTCAGGGATGAGAGTGGCTTGAACAGGAAGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000106313.8 ENSMUST00000106314.8 ENSMUST00000133913.8 ENSMUST00000142356.3 ENSMUST00000152267.8 |
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| CDS CCA 72 bp | TCTCTGTGGCACTTTGCCGGGAAAGCTTGCTGCGGCTaGCTCGATCCCGGGCCCCAGGTCGAGCCAGACTCT | + |
|
Preference number: 6 (lower is better) Translates to: SLWHFAGKACCG*LDPGPQVEPDS Trigger: AGAGTCTGGCTCGACCTGGGGCCCGGGATCGAGCCAGCCGCAGCAAGCTTTCCCGGCAAAGTGCCACAGAGA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000106313.8 ENSMUST00000106314.8 ENSMUST00000152267.8 |
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| CDS GCA 72 bp | AGAGGCAACATGGGCAGCGGGATCTCTGTGGCACTTTaGCGGGAAAGCTTGCTGCGGCTGGCTCGATCCCGG | + |
|
Preference number: 6 (lower is better) Translates to: RGNMGSGISVAL*RESLLRLARSR Trigger: CCGGGATCGAGCCAGCCGCAGCAAGCTTTCCCGGCAAAGTGCCACAGAGATCCCGCTGCCCATGTTGCCTCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000106313.8 ENSMUST00000106314.8 ENSMUST00000152267.8 |
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| CDS CAA 72 bp | CAGAGGCAACATGGGCAGCGGGATCTCTGTGGCACTTaGCCGGGAAAGCTTGCTGCGGCTGGCTCGATCCCG | + |
|
Preference number: 6 (lower is better) Translates to: QRQHGQRDLCGT*PGKLAAAGSIP Trigger: CGGGATCGAGCCAGCCGCAGCAAGCTTTCCCGGCAAAGTGCCACAGAGATCCCGCTGCCCATGTTGCCTCTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000106313.8 ENSMUST00000106314.8 ENSMUST00000152267.8 |
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| CDS CAA 72 bp | CTCAATCTCCACACCCCGGCGCTCAATGGTCAGAGTTaGTGCCGTGCGAGCACTGGCATCTGGCACCTGCCG | + |
|
Preference number: 6 (lower is better) Translates to: LNLHTPALNGQS*CRASTGIWHLP Trigger: CGGCAGGTGCCAGATGCCAGTGCTCGCACGGCACAAACTCTGACCATTGAGCGCCGGGGTGTGGAGATTGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000106313.8 ENSMUST00000106314.8 ENSMUST00000133913.8 ENSMUST00000142356.3 ENSMUST00000152267.8 |
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| CDS GCA 72 bp | AATCTCCACACCCCGGCGCTCAATGGTCAGAGTTTGTaGCGTGCGAGCACTGGCATCTGGCACCTGCCGATC | + |
|
Preference number: 6 (lower is better) Translates to: NLHTPALNGQSL*RASTGIWHLPI Trigger: GATCGGCAGGTGCCAGATGCCAGTGCTCGCACGGCACAAACTCTGACCATTGAGCGCCGGGGTGTGGAGATT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000106313.8 ENSMUST00000106314.8 ENSMUST00000133913.8 ENSMUST00000142356.3 ENSMUST00000152267.8 |
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| CDS CCA 72 bp | GGCGCTCAATGGTCAGAGTTTGTGCCGTGCGAGCACTaGCATCTGGCACCTGCCGATCCTCGTAGAGGTTGG | + |
|
Preference number: 6 (lower is better) Translates to: GAQWSEFVPCEH*HLAPADPRRGW Trigger: CCAACCTCTACGAGGATCGGCAGGTGCCAGATGCCAGTGCTCGCACGGCACAAACTCTGACCATTGAGCGCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000106313.8 ENSMUST00000106314.8 ENSMUST00000133913.8 ENSMUST00000142356.3 ENSMUST00000152267.8 |
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| CDS CCA 72 bp | CTCCACGGTACCCCAGGAGTAGCGTCTTCCCCTCACTaGTCGGGTTCCATCCCTCACCACTTCACAAGACCC | + |
|
Preference number: 6 (lower is better) Translates to: LHGTPGVASSPH*SGSIPHHFTRP Trigger: GGGTCTTGTGAAGTGGTGAGGGATGGAACCCGACCAGTGAGGGGAAGACGCTACTCCTGGGGTACCGTGGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000106313.8 ENSMUST00000106314.8 ENSMUST00000152267.8 |
||
| CDS CCA 72 bp | TACCTCCCTCCTCAATCTCCACACCCCGGCGCTCAATaGTCAGAGTTTGTGCCGTGCGAGCACTGGCATCTG | + |
|
Preference number: 6 (lower is better) Translates to: YLPPQSPHPGAQ*SEFVPCEHWHL Trigger: CAGATGCCAGTGCTCGCACGGCACAAACTCTGACCATTGAGCGCCGGGGTGTGGAGATTGAGGAGGGAGGTA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000106313.8 ENSMUST00000106314.8 ENSMUST00000133913.8 ENSMUST00000142356.3 ENSMUST00000152267.8 |
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| CDS CAA 72 bp | TTGCTCGCCCTGAGCCTGGCTCTGCTGCATCTGGGCTaGCATCTTCTCCAGCATTTCTTGCATGCGGCGCAG | + |
|
Preference number: 6 (lower is better) Translates to: LLALSLALLHLG*HLLQHFLHAAQ Trigger: CTGCGCCGCATGCAAGAAATGCTGGAGAAGATGCAAGCCCAGATGCAGCAGAGCCAGGCTCAGGGCGAGCAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000106313.8 ENSMUST00000106314.8 ENSMUST00000152267.8 |
||
| CDS CAA 90 bp | TCCCTAGGCATCAGGGCGTCTGCTTTACCGATGACCGGGATGATATaGACTTTCTCGTGCACTGCCCGGAGGAAAGCCACATCTAGGGGC | + |
|
Preference number: 6 (lower is better) Translates to: SLGIRASALPMTGMI*TFSCTARRKATSRG Trigger: GCCCCTAGATGTGGCTTTCCTCCGGGCAGTGCACGAGAAAGTCAATATCATCCCGGTCATCGGTAAAGCAGACGCCCTGATGCCTAGGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000106313.8 ENSMUST00000106314.8 ENSMUST00000142356.3 ENSMUST00000152267.8 |
||
| CDS TCA 72 bp | TCTTTCAACTGGTCCCGGATCTTCTGCTTGAGGGCCTaGGTCTCCCTAGGCATCAGGGCGTCTGCTTTACCG | + |
|
Preference number: 6 (lower is better) Translates to: SFNWSRIFCLRA*VSLGIRASALP Trigger: CGGTAAAGCAGACGCCCTGATGCCTAGGGAGACTCAGGCCCTCAAGCAGAAGATCCGGGACCAGTTGAAAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000106313.8 ENSMUST00000106314.8 ENSMUST00000142356.3 |
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| CDS GCA 72 bp | GCTTTACCGATGACCGGGATGATATTGACTTTCTCGTaGACTGCCCGGAGGAAAGCCACATCTAGGGGCCGG | + |
|
Preference number: 6 (lower is better) Translates to: ALPMTGMILTFS*TARRKATSRGR Trigger: CCGGCCCCTAGATGTGGCTTTCCTCCGGGCAGTGCACGAGAAAGTCAATATCATCCCGGTCATCGGTAAAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000106313.8 ENSMUST00000106314.8 ENSMUST00000133913.8 ENSMUST00000142356.3 ENSMUST00000152267.8 |
||
| CDS CCA 72 bp | AATGGTCAGAGTTTGTGCCGTGCGAGCACTGGCATCTaGCACCTGCCGATCCTCGTAGAGGTTGGTGAGGAA | + |
|
Preference number: 6 (lower is better) Translates to: NGQSLCRASTGI*HLPILVEVGEE Trigger: TTCCTCACCAACCTCTACGAGGATCGGCAGGTGCCAGATGCCAGTGCTCGCACGGCACAAACTCTGACCATT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000106313.8 ENSMUST00000106314.8 ENSMUST00000133913.8 ENSMUST00000142356.3 ENSMUST00000152267.8 |
||
| CDS TCA 72 bp | ACTGCGAAAGGGATGTTTTCCTTCTGCTTGAGGGCCTaGGTCTCCCTAGGCATCAGGGCGTCTGCTTTACCG | + |
|
Preference number: 6 (lower is better) Translates to: TAKGMFSFCLRA*VSLGIRASALP Trigger: CGGTAAAGCAGACGCCCTGATGCCTAGGGAGACTCAGGCCCTCAAGCAGAAGGAAAACATCCCTTTCGCAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152267.8 |
||
| CDS CCA 72 bp | CGCGAATCAACTTTTCAGTGTCAGCCAGAGGCAACATaGGCAGCGGGATCTCTGTGGCACTTTGCCGGGAAA | + |
|
Preference number: 6 (lower is better) Translates to: RESTFQCQPEAT*AAGSLWHFAGK Trigger: TTTCCCGGCAAAGTGCCACAGAGATCCCGCTGCCCATGTTGCCTCTGGCTGACACTGAAAAGTTGATTCGCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000106313.8 ENSMUST00000106314.8 ENSMUST00000152267.8 |
||
| CDS CAA 90 bp | AGCCTGGCTCTGCTGCATCTGGGCTTGCATCTTCTCCAGCATTTCTaGCATGCGGCGCAGCTCTTCGTCCTTCTCGCGAATCAACTTTTC | + |
|
Preference number: 6 (lower is better) Translates to: SLALLHLGLHLLQHF*HAAQLFVLLANQLF Trigger: GAAAAGTTGATTCGCGAGAAGGACGAAGAGCTGCGCCGCATGCAAGAAATGCTGGAGAAGATGCAAGCCCAGATGCAGCAGAGCCAGGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000106313.8 ENSMUST00000106314.8 ENSMUST00000152267.8 |
||
| CDS GCA 72 bp | CTTGAGGGCCTGAGTCTCCCTAGGCATCAGGGCGTCTaGTTTACCGATGACCGGGATGATATTGACTTTCTC | + |
|
Preference number: 6 (lower is better) Translates to: LEGLSLPRHQGV*FTDDRDDIDFL Trigger: GAGAAAGTCAATATCATCCCGGTCATCGGTAAAGCAGACGCCCTGATGCCTAGGGAGACTCAGGCCCTCAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000106313.8 ENSMUST00000106314.8 ENSMUST00000142356.3 ENSMUST00000152267.8 |
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| CDS GCA 72 bp | GGTTCCATCCCTCACCACTTCACAAGACCCAACGACTaGGAAAGGGATGTTTTCCTTCTGCTTGAGGGCCTG | + |
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Preference number: 6 (lower is better) Translates to: GSIPHHFTRPND*ERDVFLLLEGL Trigger: CAGGCCCTCAAGCAGAAGGAAAACATCCCTTTCGCAGTCGTTGGGTCTTGTGAAGTGGTGAGGGATGGAACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152267.8 |
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| CDS CAA 72 bp | ATCAGGGCGTCTGCTTTACCGATGACCGGGATGATATaGACTTTCTCGTGCACTGCCCGGAGGAAAGCCACA | + |
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Preference number: 6 (lower is better) Translates to: IRASALPMTGMI*TFSCTARRKAT Trigger: TGTGGCTTTCCTCCGGGCAGTGCACGAGAAAGTCAATATCATCCCGGTCATCGGTAAAGCAGACGCCCTGAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000106313.8 ENSMUST00000106314.8 ENSMUST00000142356.3 ENSMUST00000152267.8 |
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| CDS GCA 72 bp | TTCAAGCCACTCTCATCCCTGAGGTATTGCTCAAACTaGTCCTCAATGAAGCGAACCACAGGCAGCCAGCAG | + |
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Preference number: 6 (lower is better) Translates to: FKPLSSLRYCSN*SSMKRTTGSQQ Trigger: CTGCTGGCTGCCTGTGGTTCGCTTCATTGAGGAGCAGTTTGAGCAATACCTCAGGGATGAGAGTGGCTTGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000106313.8 ENSMUST00000106314.8 ENSMUST00000133913.8 ENSMUST00000142356.3 ENSMUST00000152267.8 |
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