Pregenerated sensors for SENP8 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000051705Ensembl transcript IDs: ENSMUST00000051039.5, ENSMUST00000163586.9, ENSMUST00000177963.8, ENSMUST00000213257.2, ENSMUST00000216329.2, ENSMUST00000217093.2
Found 186 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TCTTCCTCTTCCTGGCTCCAGGGAACTGAGTACCTCTGTAGTTGCTaGCTGGAGAGGTTATTTTGGGTTATGAACGCTGGGGTCAGGGTT | + |
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Preference number: 1 (lower is better) Translates to: SSSSWLQGTEYLCSC*LERLFWVMNAGVRV Trigger: AACCCTGACCCCAGCGTTCATAACCCAAAATAACCTCTCCAGTCAGCAACTACAGAGGTACTCAGTTCCCTGGAGCCAGGAAGAGGAAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000051039.5 ENSMUST00000163586.9 ENSMUST00000177963.8 |
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| 3UTR GCA 90 bp | CCTTTATCTCCACTGGTGGCCTATCAGAACCTGTGTCCCTACGCTTaGTCTCCCTGTCCTGTCTCTTTCATTTATGGCTCACTGCCAATT | + |
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Preference number: 1 (lower is better) Translates to: PLSPLVAYQNLCPYA*SPCPVSFIYGSLPI Trigger: AATTGGCAGTGAGCCATAAATGAAAGAGACAGGACAGGGAGAGCAAGCGTAGGGACACAGGTTCTGATAGGCCACCAGTGGAGATAAAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000051039.5 ENSMUST00000163586.9 ENSMUST00000177963.8 |
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| 3UTR TCA 90 bp | GTGGTGGCATATACCTGTAATCTTATTCCTCCAGAGCTGGAGGTCTaGGGATCAGAAGTGACTACATATCAAGTTGTAGGCCAGCCTGGG | + |
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Preference number: 1 (lower is better) Translates to: VVAYTCNLIPPELEV*GSEVTTYQVVGQPG Trigger: CCCAGGCTGGCCTACAACTTGATATGTAGTCACTTCTGATCCTCAGACCTCCAGCTCTGGAGGAATAAGATTACAGGTATATGCCACCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051039.5 ENSMUST00000177963.8 |
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| 3UTR GCA 90 bp | TCAAGTCTTCCTGCACACCACAGCAGGTGCTCTTCCTCAAAGTTATaGTCCCAGTCTATAGCCATTTATTTTAATGACGTTCCATGTTCT | + |
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Preference number: 1 (lower is better) Translates to: SSLPAHHSRCSSSKL*SQSIAIYFNDVPCS Trigger: AGAACATGGAACGTCATTAAAATAAATGGCTATAGACTGGGAGCATAACTTTGAGGAAGAGCACCTGCTGTGGTGTGCAGGAAGACTTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000051039.5 ENSMUST00000163586.9 ENSMUST00000177963.8 ENSMUST00000216329.2 ENSMUST00000217093.2 |
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| 3UTR GCA 90 bp | CTGCTGTTTTCTTCATGCATGTCTTTAGACTTCATGTTATTGGTTTaGTTTGGAACATCACTTCTTTGGAATAAGCCAACAAGGAAGGGA | + |
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Preference number: 1 (lower is better) Translates to: LLFSSCMSLDFMLLV*FGTSLLWNKPTRKG Trigger: TCCCTTCCTTGTTGGCTTATTCCAAAGAAGTGATGTTCCAAAGCAAACCAATAACATGAAGTCTAAAGACATGCATGAAGAAAACAGCAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000051039.5 ENSMUST00000163586.9 ENSMUST00000177963.8 ENSMUST00000216329.2 ENSMUST00000217093.2 |
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| 3UTR GCA 90 bp | CAGGAAATAGATAAAGATGAGCTAAAGTCATCTTTATTAAGTATTTaGAGACGGGAAAGCCTTTGCACCCGAGAATGCCTTATTTTTATA | + |
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Preference number: 1 (lower is better) Translates to: QEIDKDELKSSLLSI*RRESLCTRECLIFI Trigger: TATAAAAATAAGGCATTCTCGGGTGCAAAGGCTTTCCCGTCTGCAAATACTTAATAAAGATGACTTTAGCTCATCTTTATCTATTTCCTG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000051039.5 ENSMUST00000163586.9 ENSMUST00000177963.8 ENSMUST00000216329.2 ENSMUST00000217093.2 |
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| 3UTR CAA 90 bp | GCCTTTATCTCCACTGGTGGCCTATCAGAACCTGTGTCCCTACGCTaGCTCTCCCTGTCCTGTCTCTTTCATTTATGGCTCACTGCCAAT | + |
|
Preference number: 2 (lower is better) Translates to: AFISTGGLSEPVSLR*LSLSCLFHLWLTAN Trigger: ATTGGCAGTGAGCCATAAATGAAAGAGACAGGACAGGGAGAGCAAGCGTAGGGACACAGGTTCTGATAGGCCACCAGTGGAGATAAAGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000051039.5 ENSMUST00000163586.9 ENSMUST00000177963.8 |
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| 3UTR-3UTR TCA 90 bp | AAGTCTTCCTGCACACCACAGCAGGTGCTCTTCCTCAAAGTTATGCTCCCAGTCTTTTCCCTCAGGCACTaGGGCTGTCACCATAGAGAA | + |
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Preference number: 2 (lower is better) Translates to: KSSCTPQQVLFLKVMLPVFSLRH*GCHHRE Trigger: TTCTCTATGGTGACAGCCTCAGTGCCTGAGGGAAAA...GACTGGGAGCATAACTTTGAGGAAGAGCACCTGCTGTGGTGTGCAGGAAGACTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000051039.5 ENSMUST00000163586.9 ENSMUST00000177963.8 ENSMUST00000216329.2 ENSMUST00000217093.2 |
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| 3UTR-3UTR TCA 90 bp | TTGGAATTGAGTTCAAGTCTTCCTGCACACCACAGCAGGTGCTCTTCCTCAAAGTTTTCCCTCAGGCACTaGGGCTGTCACCATAGAGAA | + |
|
Preference number: 2 (lower is better) Translates to: LELSSSLPAHHSRCSSSKFSLRH*GCHHRE Trigger: TTCTCTATGGTGACAGCCTCAGTGCCTGAGGGAAAA...CTTTGAGGAAGAGCACCTGCTGTGGTGTGCAGGAAGACTTGAACTCAATTCCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000051039.5 ENSMUST00000163586.9 ENSMUST00000177963.8 ENSMUST00000216329.2 ENSMUST00000217093.2 |
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| 3UTR-3UTR TCA 90 bp | AAGTCTTCCTGCACACCACAGCAGGTGCTCTTCCTCAAAGTTATGCTCCCAGTCGCCTCACTATGGCTGTaGAACAAAGATGTTGGTTCT | + |
|
Preference number: 2 (lower is better) Translates to: KSSCTPQQVLFLKVMLPVASLWL*NKDVGS Trigger: AGAACCAACATCTTTGTTTCACAGCCATAGTGAGGC...GACTGGGAGCATAACTTTGAGGAAGAGCACCTGCTGTGGTGTGCAGGAAGACTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000051039.5 ENSMUST00000163586.9 ENSMUST00000177963.8 ENSMUST00000216329.2 ENSMUST00000217093.2 |
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| 3UTR-3UTR GCA 90 bp | TTAGAGCTGAGTCACCCACTCACTCAGGGAAACCAGAGATGCACCACACACCCGAGATGTTGGTTCTTCTaGTGTTTTCTTCATGCATGT | + |
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Preference number: 2 (lower is better) Translates to: LELSHPLTQGNQRCTTHPRCWFF*CFLHAC Trigger: ACATGCATGAAGAAAACAGCAGAAGAACCAACATCT...CGGGTGTGTGGTGCATCTCTGGTTTCCCTGAGTGAGTGGGTGACTCAGCTCTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000051039.5 ENSMUST00000163586.9 ENSMUST00000177963.8 |
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| 3UTR-3UTR TCA 90 bp | TTGGAATTGAGTTCAAGTCTTCCTGCACACCACAGCAGGTGCTCTTCCTCAAAGGCCTCACTATGGCTGTaGAACAAAGATGTTGGTTCT | + |
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Preference number: 2 (lower is better) Translates to: LELSSSLPAHHSRCSSSKASLWL*NKDVGS Trigger: AGAACCAACATCTTTGTTTCACAGCCATAGTGAGGC...CTTTGAGGAAGAGCACCTGCTGTGGTGTGCAGGAAGACTTGAACTCAATTCCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000051039.5 ENSMUST00000163586.9 ENSMUST00000177963.8 ENSMUST00000216329.2 ENSMUST00000217093.2 |
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| 3UTR-3UTR CCA 90 bp | GGCTCCAGGGAACTGAGTACCTCTGTAGTTGCTGACTGGAGAGGTTATTTTGGGGGAACATCACTTCTTTaGAATAAGCCAACAAGGAAG | + |
|
Preference number: 2 (lower is better) Translates to: GSRELSTSVVADWRGYFGGTSLL*NKPTRK Trigger: CTTCCTTGTTGGCTTATTCCAAAGAAGTGATGTTCC...CCCAAAATAACCTCTCCAGTCAGCAACTACAGAGGTACTCAGTTCCCTGGAGCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000051039.5 ENSMUST00000163586.9 ENSMUST00000177963.8 |
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| 3UTR-3UTR CCA 90 bp | AAGTCTTCCTGCACACCACAGCAGGTGCTCTTCCTCAAAGTTATGCTCCCAGTCGGAACATCACTTCTTTaGAATAAGCCAACAAGGAAG | + |
|
Preference number: 2 (lower is better) Translates to: KSSCTPQQVLFLKVMLPVGTSLL*NKPTRK Trigger: CTTCCTTGTTGGCTTATTCCAAAGAAGTGATGTTCC...GACTGGGAGCATAACTTTGAGGAAGAGCACCTGCTGTGGTGTGCAGGAAGACTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000051039.5 ENSMUST00000163586.9 ENSMUST00000177963.8 ENSMUST00000216329.2 ENSMUST00000217093.2 |
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| 3UTR-3UTR CCA 90 bp | CCACCTCCAGTCGGACGCCTCACTATGGCTGTGAAACAAAGATGTTGGTTCTTCGGAACATCACTTCTTTaGAATAAGCCAACAAGGAAG | + |
|
Preference number: 2 (lower is better) Translates to: PPPVGRLTMAVKQRCWFFGTSLL*NKPTRK Trigger: CTTCCTTGTTGGCTTATTCCAAAGAAGTGATGTTCC...GAAGAACCAACATCTTTGTTTCACAGCCATAGTGAGGCGTCCGACTGGAGGTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000051039.5 ENSMUST00000163586.9 ENSMUST00000177963.8 ENSMUST00000216329.2 ENSMUST00000217093.2 |
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| 3UTR CAA 90 bp | TCCACCTCCAGTCGGACGCCTCACTATGGCTGTGAAACAAAGATGTaGGTTCTTCTGCTGTTTTCTTCATGCATGTCTTTAGACTTCATG | + |
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Preference number: 2 (lower is better) Translates to: STSSRTPHYGCETKM*VLLLFSSCMSLDFM Trigger: CATGAAGTCTAAAGACATGCATGAAGAAAACAGCAGAAGAACCAACATCTTTGTTTCACAGCCATAGTGAGGCGTCCGACTGGAGGTGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000051039.5 ENSMUST00000163586.9 ENSMUST00000177963.8 ENSMUST00000216329.2 ENSMUST00000217093.2 |
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| 3UTR-3UTR TCA 90 bp | GGCTCCAGGGAACTGAGTACCTCTGTAGTTGCTGACTGGAGAGGTTATTTTGGGAGAGAACACAGAGGATaGCATTCTTACAGAACAATA | + |
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Preference number: 2 (lower is better) Translates to: GSRELSTSVVADWRGYFGREHRG*HSYRTI Trigger: TATTGTTCTGTAAGAATGTCATCCTCTGTGTTCTCT...CCCAAAATAACCTCTCCAGTCAGCAACTACAGAGGTACTCAGTTCCCTGGAGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000051039.5 ENSMUST00000163586.9 ENSMUST00000177963.8 |
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| 3UTR-3UTR GCA 90 bp | AAGTCTTCCTGCACACCACAGCAGGTGCTCTTCCTCAAAGTTATGCTCCCAGTCCTGCTGTTTTCTTCATaGATGTCTTTAGACTTCATG | + |
|
Preference number: 2 (lower is better) Translates to: KSSCTPQQVLFLKVMLPVLLFSS*MSLDFM Trigger: CATGAAGTCTAAAGACATGCATGAAGAAAACAGCAG...GACTGGGAGCATAACTTTGAGGAAGAGCACCTGCTGTGGTGTGCAGGAAGACTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000051039.5 ENSMUST00000163586.9 ENSMUST00000177963.8 ENSMUST00000216329.2 ENSMUST00000217093.2 |
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| 3UTR-3UTR GCA 90 bp | CTTTTACCATCTTCCTCTTCCTGGCTCCAGGGAACTGAGTACCTCTGTAGTTGCTCTTCCTCAAAGTTATaGTCCCAGTCTATAGCCATT | + |
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Preference number: 2 (lower is better) Translates to: LLPSSSSWLQGTEYLCSCSSSKL*SQSIAI Trigger: AATGGCTATAGACTGGGAGCATAACTTTGAGGAAGA...GCAACTACAGAGGTACTCAGTTCCCTGGAGCCAGGAAGAGGAAGATGGTAAAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000051039.5 ENSMUST00000163586.9 ENSMUST00000177963.8 |
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| 3UTR-3UTR CCA 90 bp | AGGTGTACATTGGGAGACAGGACAACTTACAAGGAGCCAATCCAATTCTCTCATTGGGCTCACTTGAAATaGAATCCCCTCTCTCCCATT | + |
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Preference number: 2 (lower is better) Translates to: RCTLGDRTTYKEPIQFSHWAHLK*NPLSPI Trigger: AATGGGAGAGAGGGGATTCCATTTCAAGTGAGCCCA...ATGAGAGAATTGGATTGGCTCCTTGTAAGTTGTCCTGTCTCCCAATGTACACCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000051039.5 ENSMUST00000163586.9 ENSMUST00000177963.8 |
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| 3UTR-3UTR CCA 90 bp | AGGTGTACATTGGGAGACAGGACAACTTACAAGGAGCCAATCCAATTCTCTCATTGCCTTTATCTCCACTaGTGGCCTATCAGAACCTGT | + |
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Preference number: 2 (lower is better) Translates to: RCTLGDRTTYKEPIQFSHCLYLH*WPIRTC Trigger: ACAGGTTCTGATAGGCCACCAGTGGAGATAAAGGCA...ATGAGAGAATTGGATTGGCTCCTTGTAAGTTGTCCTGTCTCCCAATGTACACCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000051039.5 ENSMUST00000163586.9 ENSMUST00000177963.8 |
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| 3UTR-3UTR CCA 90 bp | CCACCTCCAGTCGGACGCCTCACTATGGCTGTGAAACAAAGATGTTGGTTCTTCGTTATTGGTTTGCTTTaGAACATCACTTCTTTGGAA | + |
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Preference number: 2 (lower is better) Translates to: PPPVGRLTMAVKQRCWFFVIGLL*NITSLE Trigger: TTCCAAAGAAGTGATGTTCCAAAGCAAACCAATAAC...GAAGAACCAACATCTTTGTTTCACAGCCATAGTGAGGCGTCCGACTGGAGGTGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000051039.5 ENSMUST00000163586.9 ENSMUST00000177963.8 ENSMUST00000216329.2 ENSMUST00000217093.2 |
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| 3UTR-3UTR CCA 90 bp | GGCTCCAGGGAACTGAGTACCTCTGTAGTTGCTGACTGGAGAGGTTATTTTGGGGTGAAACAAAGATGTTaGTTCTTCTGCTGTTTTCTT | + |
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Preference number: 2 (lower is better) Translates to: GSRELSTSVVADWRGYFGVKQRC*FFCCFL Trigger: AAGAAAACAGCAGAAGAACCAACATCTTTGTTTCAC...CCCAAAATAACCTCTCCAGTCAGCAACTACAGAGGTACTCAGTTCCCTGGAGCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000051039.5 ENSMUST00000163586.9 ENSMUST00000177963.8 |
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| 3UTR-3UTR TCA 90 bp | AGGTGTACATTGGGAGACAGGACAACTTACAAGGAGCCAATCCAATTCTCTCATACTGCAATTTGGAATTaGGTTCAAGTCTTCCTGCAC | + |
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Preference number: 2 (lower is better) Translates to: RCTLGDRTTYKEPIQFSHTAIWN*VQVFLH Trigger: GTGCAGGAAGACTTGAACTCAATTCCAAATTGCAGT...ATGAGAGAATTGGATTGGCTCCTTGTAAGTTGTCCTGTCTCCCAATGTACACCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000051039.5 ENSMUST00000163586.9 ENSMUST00000177963.8 |
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| 3UTR-3UTR TCA 90 bp | AGGTGTACATTGGGAGACAGGACAACTTACAAGGAGCCAATCCAATTCTCTCATAAACAGTCACTGAAATaGCACTGCTTGCTGCCTTTA | + |
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Preference number: 2 (lower is better) Translates to: RCTLGDRTTYKEPIQFSHKQSLK*HCLLPL Trigger: TAAAGGCAGCAAGCAGTGTCATTTCAGTGACTGTTT...ATGAGAGAATTGGATTGGCTCCTTGTAAGTTGTCCTGTCTCCCAATGTACACCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000051039.5 ENSMUST00000163586.9 ENSMUST00000177963.8 |
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| 3UTR-3UTR GCA 90 bp | TTAGGTAATGATCCACCTCCAGTCGGACGCCTCACTATGGCTGTGAAACAAAGACTGCTGTTTTCTTCATaGATGTCTTTAGACTTCATG | + |
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Preference number: 2 (lower is better) Translates to: LGNDPPPVGRLTMAVKQRLLFSS*MSLDFM Trigger: CATGAAGTCTAAAGACATGCATGAAGAAAACAGCAG...TCTTTGTTTCACAGCCATAGTGAGGCGTCCGACTGGAGGTGGATCATTACCTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000051039.5 ENSMUST00000163586.9 ENSMUST00000177963.8 ENSMUST00000216329.2 ENSMUST00000217093.2 |
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| 3UTR-3UTR TCA 90 bp | TCTCTTTCATTTATGGCTCACTGCCAATTTCTAACATTTTCCTGCCTATCTTTCTTTTCCCTCAGGCACTaGGGCTGTCACCATAGAGAA | + |
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Preference number: 2 (lower is better) Translates to: SLSFMAHCQFLTFSCLSFFSLRH*GCHHRE Trigger: TTCTCTATGGTGACAGCCTCAGTGCCTGAGGGAAAA...GAAAGATAGGCAGGAAAATGTTAGAAATTGGCAGTGAGCCATAAATGAAAGAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000051039.5 ENSMUST00000163586.9 ENSMUST00000177963.8 |
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| 3UTR-3UTR GCA 90 bp | TCTCTTTCATTTATGGCTCACTGCCAATTTCTAACATTTTCCTGCCTATCTTTCGCACACCACAGCAGGTaGTCTTCCTCAAAGTTATGC | + |
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Preference number: 2 (lower is better) Translates to: SLSFMAHCQFLTFSCLSFAHHSR*SSSKLC Trigger: GCATAACTTTGAGGAAGAGCACCTGCTGTGGTGTGC...GAAAGATAGGCAGGAAAATGTTAGAAATTGGCAGTGAGCCATAAATGAAAGAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000051039.5 ENSMUST00000163586.9 ENSMUST00000177963.8 |
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| 3UTR-3UTR GCA 90 bp | AGGTGTACATTGGGAGACAGGACAACTTACAAGGAGCCAATCCAATTCTCTCATCTTTGCACCCGAGAATaGCTTATTTTTATAAACCGA | + |
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Preference number: 2 (lower is better) Translates to: RCTLGDRTTYKEPIQFSHLCTRE*LIFINR Trigger: TCGGTTTATAAAAATAAGGCATTCTCGGGTGCAAAG...ATGAGAGAATTGGATTGGCTCCTTGTAAGTTGTCCTGTCTCCCAATGTACACCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000051039.5 ENSMUST00000163586.9 ENSMUST00000177963.8 |
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| 3UTR-3UTR TCA 90 bp | TCTCTTTCATTTATGGCTCACTGCCAATTTCTAACATTTTCCTGCCTATCTTTCTACCTCTGTAGTTGCTaGCTGGAGAGGTTATTTTGG | + |
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Preference number: 2 (lower is better) Translates to: SLSFMAHCQFLTFSCLSFYLCSC*LERLFW Trigger: CCAAAATAACCTCTCCAGTCAGCAACTACAGAGGTA...GAAAGATAGGCAGGAAAATGTTAGAAATTGGCAGTGAGCCATAAATGAAAGAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000051039.5 ENSMUST00000163586.9 ENSMUST00000177963.8 |
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| 3UTR-3UTR CCA 90 bp | AGGTGTACATTGGGAGACAGGACAACTTACAAGGAGCCAATCCAATTCTCTCATTCTTTTGGTTTGAAATaGGCTCACTTGAAATGGAAT | + |
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Preference number: 2 (lower is better) Translates to: RCTLGDRTTYKEPIQFSHSFGLK*AHLKWN Trigger: ATTCCATTTCAAGTGAGCCCATTTCAAACCAAAAGA...ATGAGAGAATTGGATTGGCTCCTTGTAAGTTGTCCTGTCTCCCAATGTACACCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000051039.5 ENSMUST00000163586.9 ENSMUST00000177963.8 |
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| 3UTR-3UTR CCA 90 bp | GCTAATGTTGGGTTTATATATGTAACTTCTCAATTCCATATTGAGACCCAGGTTCTTTATCTCCACTGGTaGCCTATCAGAACCTGTGTC | + |
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Preference number: 2 (lower is better) Translates to: ANVGFIYVTSQFHIETQVLYLHW*PIRTCV Trigger: GACACAGGTTCTGATAGGCCACCAGTGGAGATAAAG...AACCTGGGTCTCAATATGGAATTGAGAAGTTACATATATAAACCCAACATTAGC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000051039.5 ENSMUST00000163586.9 ENSMUST00000177963.8 |
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| 3UTR-3UTR CCA 90 bp | GCTAATGTTGGGTTTATATATGTAACTTCTCAATTCCATATTGAGACCCAGGTTTGCCTTTATCTCCACTaGTGGCCTATCAGAACCTGT | + |
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Preference number: 2 (lower is better) Translates to: ANVGFIYVTSQFHIETQVCLYLH*WPIRTC Trigger: ACAGGTTCTGATAGGCCACCAGTGGAGATAAAGGCA...AACCTGGGTCTCAATATGGAATTGAGAAGTTACATATATAAACCCAACATTAGC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000051039.5 ENSMUST00000163586.9 ENSMUST00000177963.8 |
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| 3UTR-3UTR TCA 90 bp | GCTAATGTTGGGTTTATATATGTAACTTCTCAATTCCATATTGAGACCCAGGTTAAAGGGGAGACAGGCTaGTGTTTAAGTAAACAAGCA | + |
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Preference number: 2 (lower is better) Translates to: ANVGFIYVTSQFHIETQVKGETG*CLSKQA Trigger: TGCTTGTTTACTTAAACATCAGCCTGTCTCCCCTTT...AACCTGGGTCTCAATATGGAATTGAGAAGTTACATATATAAACCCAACATTAGC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000051039.5 ENSMUST00000163586.9 ENSMUST00000177963.8 |
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| 3UTR-3UTR GCA 90 bp | TCTCTTTCATTTATGGCTCACTGCCAATTTCTAACATTTTCCTGCCTATCTTTCCTGCTGTTTTCTTCATaGATGTCTTTAGACTTCATG | + |
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Preference number: 2 (lower is better) Translates to: SLSFMAHCQFLTFSCLSFLLFSS*MSLDFM Trigger: CATGAAGTCTAAAGACATGCATGAAGAAAACAGCAG...GAAAGATAGGCAGGAAAATGTTAGAAATTGGCAGTGAGCCATAAATGAAAGAGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000051039.5 ENSMUST00000163586.9 ENSMUST00000177963.8 |
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| 3UTR-3UTR GCA 90 bp | TCTCTTTCATTTATGGCTCACTGCCAATTTCTAACATTTTCCTGCCTATCTTTCAGATGTTGGTTCTTCTaGTGTTTTCTTCATGCATGT | + |
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Preference number: 2 (lower is better) Translates to: SLSFMAHCQFLTFSCLSFRCWFF*CFLHAC Trigger: ACATGCATGAAGAAAACAGCAGAAGAACCAACATCT...GAAAGATAGGCAGGAAAATGTTAGAAATTGGCAGTGAGCCATAAATGAAAGAGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000051039.5 ENSMUST00000163586.9 ENSMUST00000177963.8 |
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| 3UTR-3UTR TCA 90 bp | TCAAAGTTATGCTCCCAGTCTATAGCCATTTATTTTAATGACGTTCCATGTTCTAGAGAACACAGAGGATaGCATTCTTACAGAACAATA | + |
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Preference number: 2 (lower is better) Translates to: SKLCSQSIAIYFNDVPCSREHRG*HSYRTI Trigger: TATTGTTCTGTAAGAATGTCATCCTCTGTGTTCTCT...AGAACATGGAACGTCATTAAAATAAATGGCTATAGACTGGGAGCATAACTTTGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000051039.5 ENSMUST00000163586.9 ENSMUST00000177963.8 ENSMUST00000216329.2 ENSMUST00000217093.2 |
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| 3UTR-3UTR CCA 90 bp | TCAAAGTTATGCTCCCAGTCTATAGCCATTTATTTTAATGACGTTCCATGTTCTGTTATTGGTTTGCTTTaGAACATCACTTCTTTGGAA | + |
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Preference number: 2 (lower is better) Translates to: SKLCSQSIAIYFNDVPCSVIGLL*NITSLE Trigger: TTCCAAAGAAGTGATGTTCCAAAGCAAACCAATAAC...AGAACATGGAACGTCATTAAAATAAATGGCTATAGACTGGGAGCATAACTTTGA 34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000051039.5 ENSMUST00000163586.9 ENSMUST00000177963.8 ENSMUST00000216329.2 ENSMUST00000217093.2 |
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| 3UTR-3UTR CCA 90 bp | GCTAATGTTGGGTTTATATATGTAACTTCTCAATTCCATATTGAGACCCAGGTTGTGAAACAAAGATGTTaGTTCTTCTGCTGTTTTCTT | + |
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Preference number: 2 (lower is better) Translates to: ANVGFIYVTSQFHIETQVVKQRC*FFCCFL Trigger: AAGAAAACAGCAGAAGAACCAACATCTTTGTTTCAC...AACCTGGGTCTCAATATGGAATTGAGAAGTTACATATATAAACCCAACATTAGC 34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000051039.5 ENSMUST00000163586.9 ENSMUST00000177963.8 |
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| 3UTR-3UTR CCA 90 bp | TCAAAGTTATGCTCCCAGTCTATAGCCATTTATTTTAATGACGTTCCATGTTCTGTGAAACAAAGATGTTaGTTCTTCTGCTGTTTTCTT | + |
|
Preference number: 2 (lower is better) Translates to: SKLCSQSIAIYFNDVPCSVKQRC*FFCCFL Trigger: AAGAAAACAGCAGAAGAACCAACATCTTTGTTTCAC...AGAACATGGAACGTCATTAAAATAAATGGCTATAGACTGGGAGCATAACTTTGA 34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000051039.5 ENSMUST00000163586.9 ENSMUST00000177963.8 ENSMUST00000216329.2 ENSMUST00000217093.2 |
||
| 3UTR GCA 72 bp | CCACTGGTGGCCTATCAGAACCTGTGTCCCTACGCTTaGTCTCCCTGTCCTGTCTCTTTCATTTATGGCTCA | + |
|
Preference number: 3 (lower is better) Translates to: PLVAYQNLCPYA*SPCPVSFIYGS Trigger: TGAGCCATAAATGAAAGAGACAGGACAGGGAGAGCAAGCGTAGGGACACAGGTTCTGATAGGCCACCAGTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000051039.5 ENSMUST00000163586.9 ENSMUST00000177963.8 |
||
| 3UTR GCA 72 bp | GAGCTGAGTCACCCACTCACTCAGGGAAACCAGAGATaGACCACACACCCGCAGGTGGTTTTGTTTTGTTTT | + |
|
Preference number: 3 (lower is better) Translates to: ELSHPLTQGNQR*TTHPQVVLFCF Trigger: AAAACAAAACAAAACCACCTGCGGGTGTGTGGTGCATCTCTGGTTTCCCTGAGTGAGTGGGTGACTCAGCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000051039.5 ENSMUST00000163586.9 ENSMUST00000177963.8 |
||
| 3UTR-3UTR CAA 90 bp | TTAGAGCTGAGTCACCCACTCACTCAGGGAAACCAGAGATGCACCACACACCCGTACTGCAATTTGGAATaGAGTTCAAGTCTTCCTGCA | + |
|
Preference number: 3 (lower is better) Translates to: LELSHPLTQGNQRCTTHPYCNLE*SSSLPA Trigger: TGCAGGAAGACTTGAACTCAATTCCAAATTGCAGTA...CGGGTGTGTGGTGCATCTCTGGTTTCCCTGAGTGAGTGGGTGACTCAGCTCTAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000051039.5 ENSMUST00000163586.9 ENSMUST00000177963.8 |
||
| 3UTR TCA 72 bp | ATGATCCACCTCCAGTCGGACGCCTCACTATGGCTGTaGAACAAAGATGTTGGTTCTTCTGCTGTTTTCTTC | + |
|
Preference number: 3 (lower is better) Translates to: MIHLQSDASLWL*NKDVGSSAVFF Trigger: GAAGAAAACAGCAGAAGAACCAACATCTTTGTTTCACAGCCATAGTGAGGCGTCCGACTGGAGGTGGATCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000051039.5 ENSMUST00000163586.9 ENSMUST00000177963.8 ENSMUST00000216329.2 ENSMUST00000217093.2 |
||
| 3UTR GCA 72 bp | CAGATCCCATACACTGAAGCCTGCTTATGCAGCCTGTaGTTTTACACTTTTACCATCTTCCTCTTCCTGGCT | + |
|
Preference number: 3 (lower is better) Translates to: QIPYTEACLCSL*FYTFTIFLFLA Trigger: AGCCAGGAAGAGGAAGATGGTAAAAGTGTAAAAGCACAGGCTGCATAAGCAGGCTTCAGTGTATGGGATCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000051039.5 ENSMUST00000163586.9 ENSMUST00000177963.8 |
||
| 3UTR-3UTR CAA 90 bp | GGCTCCAGGGAACTGAGTACCTCTGTAGTTGCTGACTGGAGAGGTTATTTTGGGTGTTATTGGTTTGCTTaGGAACATCACTTCTTTGGA | + |
|
Preference number: 3 (lower is better) Translates to: GSRELSTSVVADWRGYFGCYWFA*EHHFFG Trigger: TCCAAAGAAGTGATGTTCCAAAGCAAACCAATAACA...CCCAAAATAACCTCTCCAGTCAGCAACTACAGAGGTACTCAGTTCCCTGGAGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000051039.5 ENSMUST00000163586.9 ENSMUST00000177963.8 |
||
| 3UTR-3UTR CAA 90 bp | AGGTGTACATTGGGAGACAGGACAACTTACAAGGAGCCAATCCAATTCTCTCATTTGAAATGGGCTCACTaGAAATGGAATCCCCTCTCT | + |
|
Preference number: 3 (lower is better) Translates to: RCTLGDRTTYKEPIQFSHLKWAH*KWNPLS Trigger: AGAGAGGGGATTCCATTTCAAGTGAGCCCATTTCAA...ATGAGAGAATTGGATTGGCTCCTTGTAAGTTGTCCTGTCTCCCAATGTACACCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000051039.5 ENSMUST00000163586.9 ENSMUST00000177963.8 |
||
| 3UTR GCA 72 bp | CCTGCACACCACAGCAGGTGCTCTTCCTCAAAGTTATaGTCCCAGTCTATAGCCATTTATTTTAATGACGTT | + |
|
Preference number: 3 (lower is better) Translates to: PAHHSRCSSSKL*SQSIAIYFNDV Trigger: AACGTCATTAAAATAAATGGCTATAGACTGGGAGCATAACTTTGAGGAAGAGCACCTGCTGTGGTGTGCAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000051039.5 ENSMUST00000163586.9 ENSMUST00000177963.8 ENSMUST00000216329.2 ENSMUST00000217093.2 |
||
| 3UTR-3UTR CAA 90 bp | TTGGAATTGAGTTCAAGTCTTCCTGCACACCACAGCAGGTGCTCTTCCTCAAAGTGTGAAACAAAGATGTaGGTTCTTCTGCTGTTTTCT | + |
|
Preference number: 3 (lower is better) Translates to: LELSSSLPAHHSRCSSSKCETKM*VLLLFS Trigger: AGAAAACAGCAGAAGAACCAACATCTTTGTTTCACA...CTTTGAGGAAGAGCACCTGCTGTGGTGTGCAGGAAGACTTGAACTCAATTCCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000051039.5 ENSMUST00000163586.9 ENSMUST00000177963.8 ENSMUST00000216329.2 ENSMUST00000217093.2 |
||
| 3UTR TCA 72 bp | TATACCTGTAATCTTATTCCTCCAGAGCTGGAGGTCTaGGGATCAGAAGTGACTACATATCAAGTTGTAGGC | + |
|
Preference number: 3 (lower is better) Translates to: YTCNLIPPELEV*GSEVTTYQVVG Trigger: GCCTACAACTTGATATGTAGTCACTTCTGATCCTCAGACCTCCAGCTCTGGAGGAATAAGATTACAGGTATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051039.5 ENSMUST00000177963.8 |
||
| 3UTR GCA 72 bp | AACTTGTTTCAGATCCCATACACTGAAGCCTGCTTATaGAGCCTGTGCTTTTACACTTTTACCATCTTCCTC | + |
|
Preference number: 3 (lower is better) Translates to: NLFQIPYTEACL*SLCFYTFTIFL Trigger: GAGGAAGATGGTAAAAGTGTAAAAGCACAGGCTGCATAAGCAGGCTTCAGTGTATGGGATCTGAAACAAGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000051039.5 ENSMUST00000163586.9 ENSMUST00000177963.8 |
||
| 3UTR TCA 72 bp | CTCTCGCATGTATTAGCTATTAAAGGGGAGACAGGCTaGTGTTTAAGTAAACAAGCATACTGTGTATTACCC | + |
|
Preference number: 3 (lower is better) Translates to: LSHVLAIKGETG*CLSKQAYCVLP Trigger: GGGTAATACACAGTATGCTTGTTTACTTAAACATCAGCCTGTCTCCCCTTTAATAGCTAATACATGCGAGAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000051039.5 ENSMUST00000163586.9 ENSMUST00000177963.8 |
||
| 3UTR GCA 72 bp | GATAAAGATGAGCTAAAGTCATCTTTATTAAGTATTTaGAGACGGGAAAGCCTTTGCACCCGAGAATGCCTT | + |
|
Preference number: 3 (lower is better) Translates to: DKDELKSSLLSI*RRESLCTRECL Trigger: AAGGCATTCTCGGGTGCAAAGGCTTTCCCGTCTGCAAATACTTAATAAAGATGACTTTAGCTCATCTTTATC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000051039.5 ENSMUST00000163586.9 ENSMUST00000177963.8 ENSMUST00000216329.2 ENSMUST00000217093.2 |
||
| 3UTR-3UTR CAA 90 bp | GAATCACATCTTTGTGTTTTACATCCCATATACACTGCAAATTGTTATCGGGGTTGTTATTGGTTTGCTTaGGAACATCACTTCTTTGGA | + |
|
Preference number: 3 (lower is better) Translates to: ESHLCVLHPIYTANCYRGCYWFA*EHHFFG Trigger: TCCAAAGAAGTGATGTTCCAAAGCAAACCAATAACA...ACCCCGATAACAATTTGCAGTGTATATGGGATGTAAAACACAAAGATGTGATTC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000051039.5 ENSMUST00000163586.9 ENSMUST00000177963.8 |
||
| 3UTR-3UTR CAA 90 bp | TCAAAGTTATGCTCCCAGTCTATAGCCATTTATTTTAATGACGTTCCATGTTCTTGTGAAACAAAGATGTaGGTTCTTCTGCTGTTTTCT | + |
|
Preference number: 3 (lower is better) Translates to: SKLCSQSIAIYFNDVPCSCETKM*VLLLFS Trigger: AGAAAACAGCAGAAGAACCAACATCTTTGTTTCACA...AGAACATGGAACGTCATTAAAATAAATGGCTATAGACTGGGAGCATAACTTTGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000051039.5 ENSMUST00000163586.9 ENSMUST00000177963.8 ENSMUST00000216329.2 ENSMUST00000217093.2 |
||
| 3UTR GCA 72 bp | TCTTCATGCATGTCTTTAGACTTCATGTTATTGGTTTaGTTTGGAACATCACTTCTTTGGAATAAGCCAACA | + |
|
Preference number: 3 (lower is better) Translates to: SSCMSLDFMLLV*FGTSLLWNKPT Trigger: TGTTGGCTTATTCCAAAGAAGTGATGTTCCAAAGCAAACCAATAACATGAAGTCTAAAGACATGCATGAAGA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000051039.5 ENSMUST00000163586.9 ENSMUST00000177963.8 ENSMUST00000216329.2 ENSMUST00000217093.2 |
||
| 3UTR CCA 72 bp | AAAAATATAAGAATAAATGAAATTAGCCAGGAGTGGTaGCATATACCTGTAATCTTATTCCTCCAGAGCTGG | + |
|
Preference number: 3 (lower is better) Translates to: KNIRINEISQEW*HIPVILFLQSW Trigger: CCAGCTCTGGAGGAATAAGATTACAGGTATATGCCACCACTCCTGGCTAATTTCATTTATTCTTATATTTTT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000051039.5 ENSMUST00000177963.8 |
||
| 3UTR GCA 72 bp | GAAACAAAGATGTTGGTTCTTCTGCTGTTTTCTTCATaGATGTCTTTAGACTTCATGTTATTGGTTTGCTTT | + |
|
Preference number: 3 (lower is better) Translates to: ETKMLVLLLFSS*MSLDFMLLVCF Trigger: AAAGCAAACCAATAACATGAAGTCTAAAGACATGCATGAAGAAAACAGCAGAAGAACCAACATCTTTGTTTC 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000051039.5 ENSMUST00000163586.9 ENSMUST00000177963.8 ENSMUST00000216329.2 ENSMUST00000217093.2 |
||
| CDS-3UTR GCA 90 bp | TCATCTACTAGTGGTTTTCCCTCAGGCACTGAGGCTGTCACCATAGAGAAAGGCGTCGGGGTGAGTAGCTaGAGCGGGGACTCTGGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: SSTSGFPSGTEAVTIEKGVGVSS*SGDSGC Trigger: GCAGCCAGAGTCCCCGCTGCAGCTACTCACCCCGAC...GCCTTTCTCTATGGTGACAGCCTCAGTGCCTGAGGGAAAACCACTAGTAGATGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000051039.5 ENSMUST00000163586.9 ENSMUST00000177963.8 ENSMUST00000216329.2 ENSMUST00000217093.2 |
||
| 3UTR CAA 72 bp | TCCACTGGTGGCCTATCAGAACCTGTGTCCCTACGCTaGCTCTCCCTGTCCTGTCTCTTTCATTTATGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: STGGLSEPVSLR*LSLSCLFHLWL Trigger: GAGCCATAAATGAAAGAGACAGGACAGGGAGAGCAAGCGTAGGGACACAGGTTCTGATAGGCCACCAGTGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000051039.5 ENSMUST00000163586.9 ENSMUST00000177963.8 |
||
| CDS-3UTR CCA 90 bp | TTGGAATTGAGTTCAAGTCTTCCTGCACACCACAGCAGGTGCTCTTCCTCAAAGCTGCAGCGGGGACTCTaGCTGCCGTCTAAAGAGACT | + |
|
Preference number: 4 (lower is better) Translates to: LELSSSLPAHHSRCSSSKLQRGL*LPSKET Trigger: AGTCTCTTTAGACGGCAGCCAGAGTCCCCGCTGCAG...CTTTGAGGAAGAGCACCTGCTGTGGTGTGCAGGAAGACTTGAACTCAATTCCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000051039.5 ENSMUST00000163586.9 ENSMUST00000177963.8 ENSMUST00000216329.2 ENSMUST00000217093.2 |
||
| CDS-3UTR TCA 90 bp | CCACCTCCAGTCGGACGCCTCACTATGGCTGTGAAACAAAGATGTTGGTTCTTCCTGCTTTGCATGGATTaGGTTGCTCCTGCTATGGGA | + |
|
Preference number: 4 (lower is better) Translates to: PPPVGRLTMAVKQRCWFFLLCMD*VAPAMG Trigger: TCCCATAGCAGGAGCAACTCAATCCATGCAAAGCAG...GAAGAACCAACATCTTTGTTTCACAGCCATAGTGAGGCGTCCGACTGGAGGTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000051039.5 ENSMUST00000163586.9 ENSMUST00000177963.8 ENSMUST00000216329.2 ENSMUST00000217093.2 |
||
| CDS-3UTR TCA 90 bp | AAGTCTTCCTGCACACCACAGCAGGTGCTCTTCCTCAAAGTTATGCTCCCAGTCCGTCTAAAGAGACTCTaGCACAAGGCCTCGGTGTTA | + |
|
Preference number: 4 (lower is better) Translates to: KSSCTPQQVLFLKVMLPVRLKRL*HKASVL Trigger: TAACACCGAGGCCTTGTGTCAGAGTCTCTTTAGACG...GACTGGGAGCATAACTTTGAGGAAGAGCACCTGCTGTGGTGTGCAGGAAGACTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000051039.5 ENSMUST00000163586.9 ENSMUST00000177963.8 ENSMUST00000216329.2 ENSMUST00000217093.2 |
||
| CDS-3UTR GCA 90 bp | TTAGAGCTGAGTCACCCACTCACTCAGGGAAACCAGAGATGCACCACACACCCGAGCCTTCAGTTTCTCTaGTACCTGCTTTGCATGGAT | + |
|
Preference number: 4 (lower is better) Translates to: LELSHPLTQGNQRCTTHPSLQFL*YLLCMD Trigger: ATCCATGCAAAGCAGGTAGCAGAGAAACTGAAGGCT...CGGGTGTGTGGTGCATCTCTGGTTTCCCTGAGTGAGTGGGTGACTCAGCTCTAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000051039.5 ENSMUST00000163586.9 ENSMUST00000177963.8 |
||
| CDS-3UTR CCA 90 bp | TTAGAGCTGAGTCACCCACTCACTCAGGGAAACCAGAGATGCACCACACACCCGGTACCTCCGGCTGCCTaGTTAGAATTATCATTGATG | + |
|
Preference number: 4 (lower is better) Translates to: LELSHPLTQGNQRCTTHPVPPAA*LELSLM Trigger: CATCAATGATAATTCTAACCAGGCAGCCGGAGGTAC...CGGGTGTGTGGTGCATCTCTGGTTTCCCTGAGTGAGTGGGTGACTCAGCTCTAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000051039.5 ENSMUST00000163586.9 ENSMUST00000177963.8 |
||
| CDS-3UTR TCA 90 bp | CTTTTACCATCTTCCTCTTCCTGGCTCCAGGGAACTGAGTACCTCTGTAGTTGCCTGCTTTGCATGGATTaGGTTGCTCCTGCTATGGGA | + |
|
Preference number: 4 (lower is better) Translates to: LLPSSSSWLQGTEYLCSCLLCMD*VAPAMG Trigger: TCCCATAGCAGGAGCAACTCAATCCATGCAAAGCAG...GCAACTACAGAGGTACTCAGTTCCCTGGAGCCAGGAAGAGGAAGATGGTAAAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000051039.5 ENSMUST00000163586.9 ENSMUST00000177963.8 |
||
| CDS-3UTR TCA 90 bp | TCATCTACTAGTGGTTTTCCCTCAGGCACTGAGGCTGTCACCATAGAGAAAGGCCTGCTTTGCATGGATTaGGTTGCTCCTGCTATGGGA | + |
|
Preference number: 4 (lower is better) Translates to: SSTSGFPSGTEAVTIEKGLLCMD*VAPAMG Trigger: TCCCATAGCAGGAGCAACTCAATCCATGCAAAGCAG...GCCTTTCTCTATGGTGACAGCCTCAGTGCCTGAGGGAAAACCACTAGTAGATGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000051039.5 ENSMUST00000163586.9 ENSMUST00000177963.8 ENSMUST00000216329.2 ENSMUST00000217093.2 |
||
| CDS-3UTR GCA 90 bp | TTAGAGCTGAGTCACCCACTCACTCAGGGAAACCAGAGATGCACCACACACCCGGTTTGTCTCCTTTGCTaGCTAAGAAAGCCTTCAGTT | + |
|
Preference number: 4 (lower is better) Translates to: LELSHPLTQGNQRCTTHPVCLLC*LRKPSV Trigger: AACTGAAGGCTTTCTTAGGCAGCAAAGGAGACAAAC...CGGGTGTGTGGTGCATCTCTGGTTTCCCTGAGTGAGTGGGTGACTCAGCTCTAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000051039.5 ENSMUST00000163586.9 ENSMUST00000177963.8 |
||
| CDS-3UTR CCA 90 bp | GGCTCCAGGGAACTGAGTACCTCTGTAGTTGCTGACTGGAGAGGTTATTTTGGGGTGCACTTAATGAACTaGGTGACTTCAGGGCTGATG | + |
|
Preference number: 4 (lower is better) Translates to: GSRELSTSVVADWRGYFGVHLMN*VTSGLM Trigger: CATCAGCCCTGAAGTCACCCAGTTCATTAAGTGCAC...CCCAAAATAACCTCTCCAGTCAGCAACTACAGAGGTACTCAGTTCCCTGGAGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000051039.5 ENSMUST00000163586.9 ENSMUST00000177963.8 |
||
| CDS-3UTR CCA 90 bp | GGCTCCAGGGAACTGAGTACCTCTGTAGTTGCTGACTGGAGAGGTTATTTTGGGGCTGTTCTCTTGAGCTaGGGCTTTCTCTTCCACAAA | + |
|
Preference number: 4 (lower is better) Translates to: GSRELSTSVVADWRGYFGAVLLS*GFLFHK Trigger: TTTGTGGAAGAGAAAGCCCCAGCTCAAGAGAACAGC...CCCAAAATAACCTCTCCAGTCAGCAACTACAGAGGTACTCAGTTCCCTGGAGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000051039.5 ENSMUST00000163586.9 ENSMUST00000177963.8 |
||
| CDS-3UTR TCA 90 bp | AAGTCTTCCTGCACACCACAGCAGGTGCTCTTCCTCAAAGTTATGCTCCCAGTCGAAACAGACATGGTCTaGGCAGTCATGAAACTGACT | + |
|
Preference number: 4 (lower is better) Translates to: KSSCTPQQVLFLKVMLPVETDMV*AVMKLT Trigger: AGTCAGTTTCATGACTGCTCAGACCATGTCTGTTTC...GACTGGGAGCATAACTTTGAGGAAGAGCACCTGCTGTGGTGTGCAGGAAGACTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000051039.5 ENSMUST00000163586.9 ENSMUST00000177963.8 ENSMUST00000216329.2 ENSMUST00000217093.2 |
||
| CDS-3UTR TCA 90 bp | TTAGGTAATGATCCACCTCCAGTCGGACGCCTCACTATGGCTGTGAAACAAAGACTGCTTTGCATGGATTaGGTTGCTCCTGCTATGGGA | + |
|
Preference number: 4 (lower is better) Translates to: LGNDPPPVGRLTMAVKQRLLCMD*VAPAMG Trigger: TCCCATAGCAGGAGCAACTCAATCCATGCAAAGCAG...TCTTTGTTTCACAGCCATAGTGAGGCGTCCGACTGGAGGTGGATCATTACCTAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000051039.5 ENSMUST00000163586.9 ENSMUST00000177963.8 ENSMUST00000216329.2 ENSMUST00000217093.2 |
||
| CDS-3UTR TCA 90 bp | TTAGGTAATGATCCACCTCCAGTCGGACGCCTCACTATGGCTGTGAAACAAAGACGTCTAAAGAGACTCTaGCACAAGGCCTCGGTGTTA | + |
|
Preference number: 4 (lower is better) Translates to: LGNDPPPVGRLTMAVKQRRLKRL*HKASVL Trigger: TAACACCGAGGCCTTGTGTCAGAGTCTCTTTAGACG...TCTTTGTTTCACAGCCATAGTGAGGCGTCCGACTGGAGGTGGATCATTACCTAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000051039.5 ENSMUST00000163586.9 ENSMUST00000177963.8 ENSMUST00000216329.2 ENSMUST00000217093.2 |
||
| CDS-3UTR TCA 90 bp | CCACCTCCAGTCGGACGCCTCACTATGGCTGTGAAACAAAGATGTTGGTTCTTCGGGTCCATCTTGTATTaGGCAGGGATTCTCAGAAAT | + |
|
Preference number: 4 (lower is better) Translates to: PPPVGRLTMAVKQRCWFFGSILY*AGILRN Trigger: ATTTCTGAGAATCCCTGCTCAATACAAGATGGACCC...GAAGAACCAACATCTTTGTTTCACAGCCATAGTGAGGCGTCCGACTGGAGGTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216329.2 |
||
| CDS-3UTR GCA 90 bp | GGCTCCAGGGAACTGAGTACCTCTGTAGTTGCTGACTGGAGAGGTTATTTTGGGCCAGTTTGTCTCCTTTaGTGCCTAAGAAAGCCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: GSRELSTSVVADWRGYFGPVCLL*CLRKPS Trigger: TGAAGGCTTTCTTAGGCAGCAAAGGAGACAAACTGG...CCCAAAATAACCTCTCCAGTCAGCAACTACAGAGGTACTCAGTTCCCTGGAGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000051039.5 ENSMUST00000163586.9 ENSMUST00000177963.8 |
||
| CDS-3UTR GCA 90 bp | CCACCTCCAGTCGGACGCCTCACTATGGCTGTGAAACAAAGATGTTGGTTCTTCCCAGTTTGTCTCCTTTaGTGCCTAAGAAAGCCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: PPPVGRLTMAVKQRCWFFPVCLL*CLRKPS Trigger: TGAAGGCTTTCTTAGGCAGCAAAGGAGACAAACTGG...GAAGAACCAACATCTTTGTTTCACAGCCATAGTGAGGCGTCCGACTGGAGGTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000051039.5 ENSMUST00000163586.9 ENSMUST00000177963.8 ENSMUST00000216329.2 ENSMUST00000217093.2 |
||
| CDS-3UTR GCA 90 bp | TCTCTTTCATTTATGGCTCACTGCCAATTTCTAACATTTTCCTGCCTATCTTTCGTCGGGGTGAGTAGCTaGAGCGGGGACTCTGGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: SLSFMAHCQFLTFSCLSFVGVSS*SGDSGC Trigger: GCAGCCAGAGTCCCCGCTGCAGCTACTCACCCCGAC...GAAAGATAGGCAGGAAAATGTTAGAAATTGGCAGTGAGCCATAAATGAAAGAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000051039.5 ENSMUST00000163586.9 ENSMUST00000177963.8 |
||
| CDS-3UTR GCA 90 bp | GAATCACATCTTTGTGTTTTACATCCCATATACACTGCAAATTGTTATCGGGGTGTCGGGGTGAGTAGCTaGAGCGGGGACTCTGGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: ESHLCVLHPIYTANCYRGVGVSS*SGDSGC Trigger: GCAGCCAGAGTCCCCGCTGCAGCTACTCACCCCGAC...ACCCCGATAACAATTTGCAGTGTATATGGGATGTAAAACACAAAGATGTGATTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000051039.5 ENSMUST00000163586.9 ENSMUST00000177963.8 |
||
| CDS-3UTR CCA 90 bp | TCATCTACTAGTGGTTTTCCCTCAGGCACTGAGGCTGTCACCATAGAGAAAGGCGCAAACCCAATAATGTaGTCGTTGAGCCAGCTTGGA | + |
|
Preference number: 4 (lower is better) Translates to: SSTSGFPSGTEAVTIEKGANPIM*SLSQLG Trigger: TCCAAGCTGGCTCAACGACCACATTATTGGGTTTGC...GCCTTTCTCTATGGTGACAGCCTCAGTGCCTGAGGGAAAACCACTAGTAGATGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000051039.5 ENSMUST00000163586.9 ENSMUST00000177963.8 ENSMUST00000216329.2 ENSMUST00000217093.2 |
||
| CDS-3UTR CCA 90 bp | CTTTTACCATCTTCCTCTTCCTGGCTCCAGGGAACTGAGTACCTCTGTAGTTGCGTGCACTTAATGAACTaGGTGACTTCAGGGCTGATG | + |
|
Preference number: 4 (lower is better) Translates to: LLPSSSSWLQGTEYLCSCVHLMN*VTSGLM Trigger: CATCAGCCCTGAAGTCACCCAGTTCATTAAGTGCAC...GCAACTACAGAGGTACTCAGTTCCCTGGAGCCAGGAAGAGGAAGATGGTAAAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000051039.5 ENSMUST00000163586.9 ENSMUST00000177963.8 |
||
| CDS-3UTR CCA 90 bp | AAGTCTTCCTGCACACCACAGCAGGTGCTCTTCCTCAAAGTTATGCTCCCAGTCGTACCTCCGGCTGCCTaGTTAGAATTATCATTGATG | + |
|
Preference number: 4 (lower is better) Translates to: KSSCTPQQVLFLKVMLPVVPPAA*LELSLM Trigger: CATCAATGATAATTCTAACCAGGCAGCCGGAGGTAC...GACTGGGAGCATAACTTTGAGGAAGAGCACCTGCTGTGGTGTGCAGGAAGACTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000051039.5 ENSMUST00000163586.9 ENSMUST00000177963.8 ENSMUST00000216329.2 ENSMUST00000217093.2 |
||
| CDS-3UTR CCA 90 bp | TCATCTACTAGTGGTTTTCCCTCAGGCACTGAGGCTGTCACCATAGAGAAAGGCGCTACCTGCTTTGCATaGATTGAGTTGCTCCTGCTA | + |
|
Preference number: 4 (lower is better) Translates to: SSTSGFPSGTEAVTIEKGATCFA*IELLLL Trigger: TAGCAGGAGCAACTCAATCCATGCAAAGCAGGTAGC...GCCTTTCTCTATGGTGACAGCCTCAGTGCCTGAGGGAAAACCACTAGTAGATGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000051039.5 ENSMUST00000163586.9 ENSMUST00000177963.8 ENSMUST00000216329.2 ENSMUST00000217093.2 |
||
| CDS-3UTR GCA 90 bp | CCACCTCCAGTCGGACGCCTCACTATGGCTGTGAAACAAAGATGTTGGTTCTTCAGTGAGACATCTGATTaGCGCAATAGACTGTCCATA | + |
|
Preference number: 4 (lower is better) Translates to: PPPVGRLTMAVKQRCWFFSETSD*RNRLSI Trigger: TATGGACAGTCTATTGCGGCAATCAGATGTCTCACT...GAAGAACCAACATCTTTGTTTCACAGCCATAGTGAGGCGTCCGACTGGAGGTGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000051039.5 ENSMUST00000163586.9 ENSMUST00000177963.8 ENSMUST00000216329.2 ENSMUST00000217093.2 |
||
| CDS-3UTR GCA 90 bp | CCACCTCCAGTCGGACGCCTCACTATGGCTGTGAAACAAAGATGTTGGTTCTTCAGTTTCTCTGCTACCTaGTTTGCATGGATTGAGTTG | + |
|
Preference number: 4 (lower is better) Translates to: PPPVGRLTMAVKQRCWFFSFSAT*FAWIEL Trigger: CAACTCAATCCATGCAAAGCAGGTAGCAGAGAAACT...GAAGAACCAACATCTTTGTTTCACAGCCATAGTGAGGCGTCCGACTGGAGGTGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000051039.5 ENSMUST00000163586.9 ENSMUST00000177963.8 ENSMUST00000216329.2 ENSMUST00000217093.2 |
||
| CDS-3UTR GCA 90 bp | AAGTCTTCCTGCACACCACAGCAGGTGCTCTTCCTCAAAGTTATGCTCCCAGTCAGTTTCTCTGCTACCTaGTTTGCATGGATTGAGTTG | + |
|
Preference number: 4 (lower is better) Translates to: KSSCTPQQVLFLKVMLPVSFSAT*FAWIEL Trigger: CAACTCAATCCATGCAAAGCAGGTAGCAGAGAAACT...GACTGGGAGCATAACTTTGAGGAAGAGCACCTGCTGTGGTGTGCAGGAAGACTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000051039.5 ENSMUST00000163586.9 ENSMUST00000177963.8 ENSMUST00000216329.2 ENSMUST00000217093.2 |
||
| CDS-3UTR GCA 90 bp | CTTTTACCATCTTCCTCTTCCTGGCTCCAGGGAACTGAGTACCTCTGTAGTTGCAGCCTTCAGTTTCTCTaGTACCTGCTTTGCATGGAT | + |
|
Preference number: 4 (lower is better) Translates to: LLPSSSSWLQGTEYLCSCSLQFL*YLLCMD Trigger: ATCCATGCAAAGCAGGTAGCAGAGAAACTGAAGGCT...GCAACTACAGAGGTACTCAGTTCCCTGGAGCCAGGAAGAGGAAGATGGTAAAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000051039.5 ENSMUST00000163586.9 ENSMUST00000177963.8 |
||
| CDS-3UTR GCA 90 bp | CCACCTCCAGTCGGACGCCTCACTATGGCTGTGAAACAAAGATGTTGGTTCTTCGTTTGTCTCCTTTGCTaGCTAAGAAAGCCTTCAGTT | + |
|
Preference number: 4 (lower is better) Translates to: PPPVGRLTMAVKQRCWFFVCLLC*LRKPSV Trigger: AACTGAAGGCTTTCTTAGGCAGCAAAGGAGACAAAC...GAAGAACCAACATCTTTGTTTCACAGCCATAGTGAGGCGTCCGACTGGAGGTGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000051039.5 ENSMUST00000163586.9 ENSMUST00000177963.8 ENSMUST00000216329.2 ENSMUST00000217093.2 |
||
| CDS-3UTR GCA 90 bp | TCATCTACTAGTGGTTTTCCCTCAGGCACTGAGGCTGTCACCATAGAGAAAGGCCCAGTTTGTCTCCTTTaGTGCCTAAGAAAGCCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: SSTSGFPSGTEAVTIEKGPVCLL*CLRKPS Trigger: TGAAGGCTTTCTTAGGCAGCAAAGGAGACAAACTGG...GCCTTTCTCTATGGTGACAGCCTCAGTGCCTGAGGGAAAACCACTAGTAGATGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000051039.5 ENSMUST00000163586.9 ENSMUST00000177963.8 ENSMUST00000216329.2 ENSMUST00000217093.2 |
||
| CDS-3UTR GCA 90 bp | ATACCAACAAGAAAAGAAGGCTCTTACTTGAAACTGTGTAATGAGAGGTTTGTTGTCGGGGTGAGTAGCTaGAGCGGGGACTCTGGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: IPTRKEGSYLKLCNERFVVGVSS*SGDSGC Trigger: GCAGCCAGAGTCCCCGCTGCAGCTACTCACCCCGAC...AACAAACCTCTCATTACACAGTTTCAAGTAAGAGCCTTCTTTTCTTGTTGGTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000051039.5 ENSMUST00000163586.9 ENSMUST00000177963.8 ENSMUST00000216329.2 ENSMUST00000217093.2 |
||
| CDS-3UTR GCA 90 bp | TCAAAGTTATGCTCCCAGTCTATAGCCATTTATTTTAATGACGTTCCATGTTCTGTCGGGGTGAGTAGCTaGAGCGGGGACTCTGGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: SKLCSQSIAIYFNDVPCSVGVSS*SGDSGC Trigger: GCAGCCAGAGTCCCCGCTGCAGCTACTCACCCCGAC...AGAACATGGAACGTCATTAAAATAAATGGCTATAGACTGGGAGCATAACTTTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000051039.5 ENSMUST00000163586.9 ENSMUST00000177963.8 ENSMUST00000216329.2 ENSMUST00000217093.2 |
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| CDS-3UTR CCA 90 bp | TTAGGTAATGATCCACCTCCAGTCGGACGCCTCACTATGGCTGTGAAACAAAGAGCAAACCCAATAATGTaGTCGTTGAGCCAGCTTGGA | + |
|
Preference number: 4 (lower is better) Translates to: LGNDPPPVGRLTMAVKQRANPIM*SLSQLG Trigger: TCCAAGCTGGCTCAACGACCACATTATTGGGTTTGC...TCTTTGTTTCACAGCCATAGTGAGGCGTCCGACTGGAGGTGGATCATTACCTAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000051039.5 ENSMUST00000163586.9 ENSMUST00000177963.8 ENSMUST00000216329.2 ENSMUST00000217093.2 |
||
| CDS-3UTR CCA 90 bp | TTGGAATTGAGTTCAAGTCTTCCTGCACACCACAGCAGGTGCTCTTCCTCAAAGGTGCACTTAATGAACTaGGTGACTTCAGGGCTGATG | + |
|
Preference number: 4 (lower is better) Translates to: LELSSSLPAHHSRCSSSKVHLMN*VTSGLM Trigger: CATCAGCCCTGAAGTCACCCAGTTCATTAAGTGCAC...CTTTGAGGAAGAGCACCTGCTGTGGTGTGCAGGAAGACTTGAACTCAATTCCAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000051039.5 ENSMUST00000163586.9 ENSMUST00000177963.8 ENSMUST00000216329.2 ENSMUST00000217093.2 |
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| CDS-3UTR CCA 90 bp | TTAGGTAATGATCCACCTCCAGTCGGACGCCTCACTATGGCTGTGAAACAAAGAGTGCACTTAATGAACTaGGTGACTTCAGGGCTGATG | + |
|
Preference number: 4 (lower is better) Translates to: LGNDPPPVGRLTMAVKQRVHLMN*VTSGLM Trigger: CATCAGCCCTGAAGTCACCCAGTTCATTAAGTGCAC...TCTTTGTTTCACAGCCATAGTGAGGCGTCCGACTGGAGGTGGATCATTACCTAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000051039.5 ENSMUST00000163586.9 ENSMUST00000177963.8 ENSMUST00000216329.2 ENSMUST00000217093.2 |
||
| CDS-3UTR CCA 90 bp | AGGTGTACATTGGGAGACAGGACAACTTACAAGGAGCCAATCCAATTCTCTCATGGGGTTCAAGGAACATaGCAATTTCTGCAGGGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: RCTLGDRTTYKEPIQFSHGVQGT*QFLQGC Trigger: GCAGCCCTGCAGAAATTGCCATGTTCCTTGAACCCC...ATGAGAGAATTGGATTGGCTCCTTGTAAGTTGTCCTGTCTCCCAATGTACACCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000051039.5 ENSMUST00000163586.9 ENSMUST00000177963.8 |
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| CDS-3UTR CCA 90 bp | CTTTTACCATCTTCCTCTTCCTGGCTCCAGGGAACTGAGTACCTCTGTAGTTGCAATACCACTCTTTTGTaGGGAAGATCCAGGGGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: LLPSSSSWLQGTEYLCSCNTTLL*GRSRGS Trigger: TGAACCCCTGGATCTTCCCCACAAAAGAGTGGTATT...GCAACTACAGAGGTACTCAGTTCCCTGGAGCCAGGAAGAGGAAGATGGTAAAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000051039.5 ENSMUST00000163586.9 ENSMUST00000177963.8 |
||
| CDS-3UTR CCA 90 bp | TCATCTACTAGTGGTTTTCCCTCAGGCACTGAGGCTGTCACCATAGAGAAAGGCAATACCACTCTTTTGTaGGGAAGATCCAGGGGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: SSTSGFPSGTEAVTIEKGNTTLL*GRSRGS Trigger: TGAACCCCTGGATCTTCCCCACAAAAGAGTGGTATT...GCCTTTCTCTATGGTGACAGCCTCAGTGCCTGAGGGAAAACCACTAGTAGATGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000051039.5 ENSMUST00000163586.9 ENSMUST00000177963.8 ENSMUST00000216329.2 ENSMUST00000217093.2 |
||
| CDS-3UTR CCA 90 bp | TTAGGTAATGATCCACCTCCAGTCGGACGCCTCACTATGGCTGTGAAACAAAGAGCTACCTGCTTTGCATaGATTGAGTTGCTCCTGCTA | + |
|
Preference number: 4 (lower is better) Translates to: LGNDPPPVGRLTMAVKQRATCFA*IELLLL Trigger: TAGCAGGAGCAACTCAATCCATGCAAAGCAGGTAGC...TCTTTGTTTCACAGCCATAGTGAGGCGTCCGACTGGAGGTGGATCATTACCTAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000051039.5 ENSMUST00000163586.9 ENSMUST00000177963.8 ENSMUST00000216329.2 ENSMUST00000217093.2 |
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| CDS-3UTR CCA 90 bp | TTGGAATTGAGTTCAAGTCTTCCTGCACACCACAGCAGGTGCTCTTCCTCAAAGGCTACCTGCTTTGCATaGATTGAGTTGCTCCTGCTA | + |
|
Preference number: 4 (lower is better) Translates to: LELSSSLPAHHSRCSSSKATCFA*IELLLL Trigger: TAGCAGGAGCAACTCAATCCATGCAAAGCAGGTAGC...CTTTGAGGAAGAGCACCTGCTGTGGTGTGCAGGAAGACTTGAACTCAATTCCAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000051039.5 ENSMUST00000163586.9 ENSMUST00000177963.8 ENSMUST00000216329.2 ENSMUST00000217093.2 |
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| CDS-3UTR CCA 90 bp | TTAGGTAATGATCCACCTCCAGTCGGACGCCTCACTATGGCTGTGAAACAAAGAGCTGTTCTCTTGAGCTaGGGCTTTCTCTTCCACAAA | + |
|
Preference number: 4 (lower is better) Translates to: LGNDPPPVGRLTMAVKQRAVLLS*GFLFHK Trigger: TTTGTGGAAGAGAAAGCCCCAGCTCAAGAGAACAGC...TCTTTGTTTCACAGCCATAGTGAGGCGTCCGACTGGAGGTGGATCATTACCTAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000051039.5 ENSMUST00000163586.9 ENSMUST00000177963.8 ENSMUST00000216329.2 ENSMUST00000217093.2 |
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| CDS-3UTR TCA 90 bp | TTGGAATTGAGTTCAAGTCTTCCTGCACACCACAGCAGGTGCTCTTCCTCAAAGGAAACAGACATGGTCTaGGCAGTCATGAAACTGACT | + |
|
Preference number: 4 (lower is better) Translates to: LELSSSLPAHHSRCSSSKETDMV*AVMKLT Trigger: AGTCAGTTTCATGACTGCTCAGACCATGTCTGTTTC...CTTTGAGGAAGAGCACCTGCTGTGGTGTGCAGGAAGACTTGAACTCAATTCCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000051039.5 ENSMUST00000163586.9 ENSMUST00000177963.8 ENSMUST00000216329.2 ENSMUST00000217093.2 |
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| CDS-3UTR GCA 90 bp | CCACCTCCAGTCGGACGCCTCACTATGGCTGTGAAACAAAGATGTTGGTTCTTCGGATTGAGTTGCTCCTaGTATGGGAATCATAATGAA | + |
|
Preference number: 4 (lower is better) Translates to: PPPVGRLTMAVKQRCWFFGLSCS*YGNHNE Trigger: TTCATTATGATTCCCATAGCAGGAGCAACTCAATCC...GAAGAACCAACATCTTTGTTTCACAGCCATAGTGAGGCGTCCGACTGGAGGTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000051039.5 ENSMUST00000163586.9 ENSMUST00000177963.8 ENSMUST00000216329.2 ENSMUST00000217093.2 |
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| CDS-3UTR GCA 90 bp | TCATCTACTAGTGGTTTTCCCTCAGGCACTGAGGCTGTCACCATAGAGAAAGGCAGTTTCTCTGCTACCTaGTTTGCATGGATTGAGTTG | + |
|
Preference number: 4 (lower is better) Translates to: SSTSGFPSGTEAVTIEKGSFSAT*FAWIEL Trigger: CAACTCAATCCATGCAAAGCAGGTAGCAGAGAAACT...GCCTTTCTCTATGGTGACAGCCTCAGTGCCTGAGGGAAAACCACTAGTAGATGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000051039.5 ENSMUST00000163586.9 ENSMUST00000177963.8 ENSMUST00000216329.2 ENSMUST00000217093.2 |
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| CDS-3UTR GCA 90 bp | TCATCTACTAGTGGTTTTCCCTCAGGCACTGAGGCTGTCACCATAGAGAAAGGCGTTTGTCTCCTTTGCTaGCTAAGAAAGCCTTCAGTT | + |
|
Preference number: 4 (lower is better) Translates to: SSTSGFPSGTEAVTIEKGVCLLC*LRKPSV Trigger: AACTGAAGGCTTTCTTAGGCAGCAAAGGAGACAAAC...GCCTTTCTCTATGGTGACAGCCTCAGTGCCTGAGGGAAAACCACTAGTAGATGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000051039.5 ENSMUST00000163586.9 ENSMUST00000177963.8 ENSMUST00000216329.2 ENSMUST00000217093.2 |
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| CDS-3UTR CCA 90 bp | TACAGTGAAACTTCCCATTCAGAGAACACAGAGGATGACATTCTTACAGAACAACTGCAGCGGGGACTCTaGCTGCCGTCTAAAGAGACT | + |
|
Preference number: 4 (lower is better) Translates to: YSETSHSENTEDDILTEQLQRGL*LPSKET Trigger: AGTCTCTTTAGACGGCAGCCAGAGTCCCCGCTGCAG...TTGTTCTGTAAGAATGTCATCCTCTGTGTTCTCTGAATGGGAAGTTTCACTGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000051039.5 ENSMUST00000163586.9 ENSMUST00000177963.8 ENSMUST00000216329.2 ENSMUST00000217093.2 |
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| CDS-3UTR GCA 90 bp | TTAGGTAATGATCCACCTCCAGTCGGACGCCTCACTATGGCTGTGAAACAAAGAAGTGAGACATCTGATTaGCGCAATAGACTGTCCATA | + |
|
Preference number: 4 (lower is better) Translates to: LGNDPPPVGRLTMAVKQRSETSD*RNRLSI Trigger: TATGGACAGTCTATTGCGGCAATCAGATGTCTCACT...TCTTTGTTTCACAGCCATAGTGAGGCGTCCGACTGGAGGTGGATCATTACCTAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000051039.5 ENSMUST00000163586.9 ENSMUST00000177963.8 ENSMUST00000216329.2 ENSMUST00000217093.2 |
||
| CDS-3UTR GCA 90 bp | TCATCTACTAGTGGTTTTCCCTCAGGCACTGAGGCTGTCACCATAGAGAAAGGCGGATTGAGTTGCTCCTaGTATGGGAATCATAATGAA | + |
|
Preference number: 4 (lower is better) Translates to: SSTSGFPSGTEAVTIEKGGLSCS*YGNHNE Trigger: TTCATTATGATTCCCATAGCAGGAGCAACTCAATCC...GCCTTTCTCTATGGTGACAGCCTCAGTGCCTGAGGGAAAACCACTAGTAGATGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000051039.5 ENSMUST00000163586.9 ENSMUST00000177963.8 ENSMUST00000216329.2 ENSMUST00000217093.2 |
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| CDS-3UTR CCA 90 bp | TCTCTTTCATTTATGGCTCACTGCCAATTTCTAACATTTTCCTGCCTATCTTTCCTGCAGCGGGGACTCTaGCTGCCGTCTAAAGAGACT | + |
|
Preference number: 4 (lower is better) Translates to: SLSFMAHCQFLTFSCLSFLQRGL*LPSKET Trigger: AGTCTCTTTAGACGGCAGCCAGAGTCCCCGCTGCAG...GAAAGATAGGCAGGAAAATGTTAGAAATTGGCAGTGAGCCATAAATGAAAGAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000051039.5 ENSMUST00000163586.9 ENSMUST00000177963.8 |
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| CDS-3UTR TCA 90 bp | AGGTGTACATTGGGAGACAGGACAACTTACAAGGAGCCAATCCAATTCTCTCATGAAACAGACATGGTCTaGGCAGTCATGAAACTGACT | + |
|
Preference number: 4 (lower is better) Translates to: RCTLGDRTTYKEPIQFSHETDMV*AVMKLT Trigger: AGTCAGTTTCATGACTGCTCAGACCATGTCTGTTTC...ATGAGAGAATTGGATTGGCTCCTTGTAAGTTGTCCTGTCTCCCAATGTACACCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000051039.5 ENSMUST00000163586.9 ENSMUST00000177963.8 |
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| CDS-3UTR CCA 90 bp | CCACCTCCAGTCGGACGCCTCACTATGGCTGTGAAACAAAGATGTTGGTTCTTCCATGAAACTGACTATTaGCAAAGTATTCAAAGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: PPPVGRLTMAVKQRCWFFHETDY*QSIQRQ Trigger: TTGCCTTTGAATACTTTGCCAATAGTCAGTTTCATG...GAAGAACCAACATCTTTGTTTCACAGCCATAGTGAGGCGTCCGACTGGAGGTGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000051039.5 ENSMUST00000163586.9 ENSMUST00000177963.8 ENSMUST00000216329.2 ENSMUST00000217093.2 |
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| CDS-3UTR CCA 90 bp | TACAGTGAAACTTCCCATTCAGAGAACACAGAGGATGACATTCTTACAGAACAAGGGGTTCAAGGAACATaGCAATTTCTGCAGGGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: YSETSHSENTEDDILTEQGVQGT*QFLQGC Trigger: GCAGCCCTGCAGAAATTGCCATGTTCCTTGAACCCC...TTGTTCTGTAAGAATGTCATCCTCTGTGTTCTCTGAATGGGAAGTTTCACTGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000051039.5 ENSMUST00000163586.9 ENSMUST00000177963.8 ENSMUST00000216329.2 ENSMUST00000217093.2 |
||
| CDS-3UTR CCA 90 bp | ATACCAACAAGAAAAGAAGGCTCTTACTTGAAACTGTGTAATGAGAGGTTTGTTCTGCAGCGGGGACTCTaGCTGCCGTCTAAAGAGACT | + |
|
Preference number: 4 (lower is better) Translates to: IPTRKEGSYLKLCNERFVLQRGL*LPSKET Trigger: AGTCTCTTTAGACGGCAGCCAGAGTCCCCGCTGCAG...AACAAACCTCTCATTACACAGTTTCAAGTAAGAGCCTTCTTTTCTTGTTGGTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000051039.5 ENSMUST00000163586.9 ENSMUST00000177963.8 ENSMUST00000216329.2 ENSMUST00000217093.2 |
||
| CDS-3UTR GCA 90 bp | AGGTGTACATTGGGAGACAGGACAACTTACAAGGAGCCAATCCAATTCTCTCATAGTGAGACATCTGATTaGCGCAATAGACTGTCCATA | + |
|
Preference number: 4 (lower is better) Translates to: RCTLGDRTTYKEPIQFSHSETSD*RNRLSI Trigger: TATGGACAGTCTATTGCGGCAATCAGATGTCTCACT...ATGAGAGAATTGGATTGGCTCCTTGTAAGTTGTCCTGTCTCCCAATGTACACCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000051039.5 ENSMUST00000163586.9 ENSMUST00000177963.8 |
||
| CDS-3UTR CCA 90 bp | TCTCTTTCATTTATGGCTCACTGCCAATTTCTAACATTTTCCTGCCTATCTTTCGGGGTTCAAGGAACATaGCAATTTCTGCAGGGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: SLSFMAHCQFLTFSCLSFGVQGT*QFLQGC Trigger: GCAGCCCTGCAGAAATTGCCATGTTCCTTGAACCCC...GAAAGATAGGCAGGAAAATGTTAGAAATTGGCAGTGAGCCATAAATGAAAGAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000051039.5 ENSMUST00000163586.9 ENSMUST00000177963.8 |
||
| 3UTR CAA 72 bp | AGTCGGACGCCTCACTATGGCTGTGAAACAAAGATGTaGGTTCTTCTGCTGTTTTCTTCATGCATGTCTTTA | + |
|
Preference number: 4 (lower is better) Translates to: SRTPHYGCETKM*VLLLFSSCMSL Trigger: TAAAGACATGCATGAAGAAAACAGCAGAAGAACCAACATCTTTGTTTCACAGCCATAGTGAGGCGTCCGACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000051039.5 ENSMUST00000163586.9 ENSMUST00000177963.8 ENSMUST00000216329.2 ENSMUST00000217093.2 |
||
| CDS-3UTR TCA 90 bp | TCTCTTTCATTTATGGCTCACTGCCAATTTCTAACATTTTCCTGCCTATCTTTCCTGCTTTGCATGGATTaGGTTGCTCCTGCTATGGGA | + |
|
Preference number: 4 (lower is better) Translates to: SLSFMAHCQFLTFSCLSFLLCMD*VAPAMG Trigger: TCCCATAGCAGGAGCAACTCAATCCATGCAAAGCAG...GAAAGATAGGCAGGAAAATGTTAGAAATTGGCAGTGAGCCATAAATGAAAGAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000051039.5 ENSMUST00000163586.9 ENSMUST00000177963.8 |
||
| CDS-3UTR CCA 90 bp | TACAGTGAAACTTCCCATTCAGAGAACACAGAGGATGACATTCTTACAGAACAAGCAAACCCAATAATGTaGTCGTTGAGCCAGCTTGGA | + |
|
Preference number: 4 (lower is better) Translates to: YSETSHSENTEDDILTEQANPIM*SLSQLG Trigger: TCCAAGCTGGCTCAACGACCACATTATTGGGTTTGC...TTGTTCTGTAAGAATGTCATCCTCTGTGTTCTCTGAATGGGAAGTTTCACTGTA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000051039.5 ENSMUST00000163586.9 ENSMUST00000177963.8 ENSMUST00000216329.2 ENSMUST00000217093.2 |
||
| CDS-3UTR CCA 90 bp | TCAAAGTTATGCTCCCAGTCTATAGCCATTTATTTTAATGACGTTCCATGTTCTGGGGTTCAAGGAACATaGCAATTTCTGCAGGGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: SKLCSQSIAIYFNDVPCSGVQGT*QFLQGC Trigger: GCAGCCCTGCAGAAATTGCCATGTTCCTTGAACCCC...AGAACATGGAACGTCATTAAAATAAATGGCTATAGACTGGGAGCATAACTTTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000051039.5 ENSMUST00000163586.9 ENSMUST00000177963.8 ENSMUST00000216329.2 ENSMUST00000217093.2 |
||
| CDS-3UTR TCA 90 bp | TCAAAGTTATGCTCCCAGTCTATAGCCATTTATTTTAATGACGTTCCATGTTCTCGTCTAAAGAGACTCTaGCACAAGGCCTCGGTGTTA | + |
|
Preference number: 4 (lower is better) Translates to: SKLCSQSIAIYFNDVPCSRLKRL*HKASVL Trigger: TAACACCGAGGCCTTGTGTCAGAGTCTCTTTAGACG...AGAACATGGAACGTCATTAAAATAAATGGCTATAGACTGGGAGCATAACTTTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000051039.5 ENSMUST00000163586.9 ENSMUST00000177963.8 ENSMUST00000216329.2 ENSMUST00000217093.2 |
||
| CDS-3UTR GCA 90 bp | ATACCAACAAGAAAAGAAGGCTCTTACTTGAAACTGTGTAATGAGAGGTTTGTTGAACATGGCAATTTCTaGAGGGCTGCTGGTGCACTT | + |
|
Preference number: 4 (lower is better) Translates to: IPTRKEGSYLKLCNERFVEHGNF*RAAGAL Trigger: AAGTGCACCAGCAGCCCTGCAGAAATTGCCATGTTC...AACAAACCTCTCATTACACAGTTTCAAGTAAGAGCCTTCTTTTCTTGTTGGTAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000051039.5 ENSMUST00000163586.9 ENSMUST00000177963.8 ENSMUST00000216329.2 ENSMUST00000217093.2 |
||
| CDS-3UTR GCA 90 bp | TACAGTGAAACTTCCCATTCAGAGAACACAGAGGATGACATTCTTACAGAACAAAGCCTTCAGTTTCTCTaGTACCTGCTTTGCATGGAT | + |
|
Preference number: 4 (lower is better) Translates to: YSETSHSENTEDDILTEQSLQFL*YLLCMD Trigger: ATCCATGCAAAGCAGGTAGCAGAGAAACTGAAGGCT...TTGTTCTGTAAGAATGTCATCCTCTGTGTTCTCTGAATGGGAAGTTTCACTGTA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000051039.5 ENSMUST00000163586.9 ENSMUST00000177963.8 ENSMUST00000216329.2 ENSMUST00000217093.2 |
||
| CDS-3UTR CCA 90 bp | TACAGTGAAACTTCCCATTCAGAGAACACAGAGGATGACATTCTTACAGAACAAGTACCTCCGGCTGCCTaGTTAGAATTATCATTGATG | + |
|
Preference number: 4 (lower is better) Translates to: YSETSHSENTEDDILTEQVPPAA*LELSLM Trigger: CATCAATGATAATTCTAACCAGGCAGCCGGAGGTAC...TTGTTCTGTAAGAATGTCATCCTCTGTGTTCTCTGAATGGGAAGTTTCACTGTA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000051039.5 ENSMUST00000163586.9 ENSMUST00000177963.8 ENSMUST00000216329.2 ENSMUST00000217093.2 |
||
| CDS-3UTR GCA 90 bp | GAATCACATCTTTGTGTTTTACATCCCATATACACTGCAAATTGTTATCGGGGTCCAGTTTGTCTCCTTTaGTGCCTAAGAAAGCCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: ESHLCVLHPIYTANCYRGPVCLL*CLRKPS Trigger: TGAAGGCTTTCTTAGGCAGCAAAGGAGACAAACTGG...ACCCCGATAACAATTTGCAGTGTATATGGGATGTAAAACACAAAGATGTGATTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000051039.5 ENSMUST00000163586.9 ENSMUST00000177963.8 |
||
| CDS-3UTR CCA 90 bp | GCTAATGTTGGGTTTATATATGTAACTTCTCAATTCCATATTGAGACCCAGGTTGCAAACCCAATAATGTaGTCGTTGAGCCAGCTTGGA | + |
|
Preference number: 4 (lower is better) Translates to: ANVGFIYVTSQFHIETQVANPIM*SLSQLG Trigger: TCCAAGCTGGCTCAACGACCACATTATTGGGTTTGC...AACCTGGGTCTCAATATGGAATTGAGAAGTTACATATATAAACCCAACATTAGC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000051039.5 ENSMUST00000163586.9 ENSMUST00000177963.8 |
||
| CDS-3UTR CCA 90 bp | ATACCAACAAGAAAAGAAGGCTCTTACTTGAAACTGTGTAATGAGAGGTTTGTTGCAAACCCAATAATGTaGTCGTTGAGCCAGCTTGGA | + |
|
Preference number: 4 (lower is better) Translates to: IPTRKEGSYLKLCNERFVANPIM*SLSQLG Trigger: TCCAAGCTGGCTCAACGACCACATTATTGGGTTTGC...AACAAACCTCTCATTACACAGTTTCAAGTAAGAGCCTTCTTTTCTTGTTGGTAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000051039.5 ENSMUST00000163586.9 ENSMUST00000177963.8 ENSMUST00000216329.2 ENSMUST00000217093.2 |
||
| CDS-3UTR CCA 90 bp | TCTCTTTCATTTATGGCTCACTGCCAATTTCTAACATTTTCCTGCCTATCTTTCGTACCTCCGGCTGCCTaGTTAGAATTATCATTGATG | + |
|
Preference number: 4 (lower is better) Translates to: SLSFMAHCQFLTFSCLSFVPPAA*LELSLM Trigger: CATCAATGATAATTCTAACCAGGCAGCCGGAGGTAC...GAAAGATAGGCAGGAAAATGTTAGAAATTGGCAGTGAGCCATAAATGAAAGAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000051039.5 ENSMUST00000163586.9 ENSMUST00000177963.8 |
||
| CDS-3UTR CCA 90 bp | ATACCAACAAGAAAAGAAGGCTCTTACTTGAAACTGTGTAATGAGAGGTTTGTTGCTACCTGCTTTGCATaGATTGAGTTGCTCCTGCTA | + |
|
Preference number: 4 (lower is better) Translates to: IPTRKEGSYLKLCNERFVATCFA*IELLLL Trigger: TAGCAGGAGCAACTCAATCCATGCAAAGCAGGTAGC...AACAAACCTCTCATTACACAGTTTCAAGTAAGAGCCTTCTTTTCTTGTTGGTAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000051039.5 ENSMUST00000163586.9 ENSMUST00000177963.8 ENSMUST00000216329.2 ENSMUST00000217093.2 |
||
| CDS-3UTR CCA 90 bp | ATACCAACAAGAAAAGAAGGCTCTTACTTGAAACTGTGTAATGAGAGGTTTGTTGCTGTTCTCTTGAGCTaGGGCTTTCTCTTCCACAAA | + |
|
Preference number: 4 (lower is better) Translates to: IPTRKEGSYLKLCNERFVAVLLS*GFLFHK Trigger: TTTGTGGAAGAGAAAGCCCCAGCTCAAGAGAACAGC...AACAAACCTCTCATTACACAGTTTCAAGTAAGAGCCTTCTTTTCTTGTTGGTAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000051039.5 ENSMUST00000163586.9 ENSMUST00000177963.8 ENSMUST00000216329.2 ENSMUST00000217093.2 |
||
| CDS-3UTR TCA 90 bp | TCAAAGTTATGCTCCCAGTCTATAGCCATTTATTTTAATGACGTTCCATGTTCTGAAACAGACATGGTCTaGGCAGTCATGAAACTGACT | + |
|
Preference number: 4 (lower is better) Translates to: SKLCSQSIAIYFNDVPCSETDMV*AVMKLT Trigger: AGTCAGTTTCATGACTGCTCAGACCATGTCTGTTTC...AGAACATGGAACGTCATTAAAATAAATGGCTATAGACTGGGAGCATAACTTTGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000051039.5 ENSMUST00000163586.9 ENSMUST00000177963.8 ENSMUST00000216329.2 ENSMUST00000217093.2 |
||
| CDS-3UTR TCA 90 bp | ATACCAACAAGAAAAGAAGGCTCTTACTTGAAACTGTGTAATGAGAGGTTTGTTGAAACAGACATGGTCTaGGCAGTCATGAAACTGACT | + |
|
Preference number: 4 (lower is better) Translates to: IPTRKEGSYLKLCNERFVETDMV*AVMKLT Trigger: AGTCAGTTTCATGACTGCTCAGACCATGTCTGTTTC...AACAAACCTCTCATTACACAGTTTCAAGTAAGAGCCTTCTTTTCTTGTTGGTAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000051039.5 ENSMUST00000163586.9 ENSMUST00000177963.8 ENSMUST00000216329.2 ENSMUST00000217093.2 |
||
| CDS-3UTR GCA 90 bp | TACAGTGAAACTTCCCATTCAGAGAACACAGAGGATGACATTCTTACAGAACAAGGATTGAGTTGCTCCTaGTATGGGAATCATAATGAA | + |
|
Preference number: 4 (lower is better) Translates to: YSETSHSENTEDDILTEQGLSCS*YGNHNE Trigger: TTCATTATGATTCCCATAGCAGGAGCAACTCAATCC...TTGTTCTGTAAGAATGTCATCCTCTGTGTTCTCTGAATGGGAAGTTTCACTGTA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000051039.5 ENSMUST00000163586.9 ENSMUST00000177963.8 ENSMUST00000216329.2 ENSMUST00000217093.2 |
||
| CDS-3UTR GCA 90 bp | GAATCACATCTTTGTGTTTTACATCCCATATACACTGCAAATTGTTATCGGGGTAGTTTCTCTGCTACCTaGTTTGCATGGATTGAGTTG | + |
|
Preference number: 4 (lower is better) Translates to: ESHLCVLHPIYTANCYRGSFSAT*FAWIEL Trigger: CAACTCAATCCATGCAAAGCAGGTAGCAGAGAAACT...ACCCCGATAACAATTTGCAGTGTATATGGGATGTAAAACACAAAGATGTGATTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000051039.5 ENSMUST00000163586.9 ENSMUST00000177963.8 |
||
| CDS-3UTR GCA 90 bp | ATACCAACAAGAAAAGAAGGCTCTTACTTGAAACTGTGTAATGAGAGGTTTGTTAGCCTTCAGTTTCTCTaGTACCTGCTTTGCATGGAT | + |
|
Preference number: 4 (lower is better) Translates to: IPTRKEGSYLKLCNERFVSLQFL*YLLCMD Trigger: ATCCATGCAAAGCAGGTAGCAGAGAAACTGAAGGCT...AACAAACCTCTCATTACACAGTTTCAAGTAAGAGCCTTCTTTTCTTGTTGGTAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000051039.5 ENSMUST00000163586.9 ENSMUST00000177963.8 ENSMUST00000216329.2 ENSMUST00000217093.2 |
||
| CDS-3UTR GCA 90 bp | ATACCAACAAGAAAAGAAGGCTCTTACTTGAAACTGTGTAATGAGAGGTTTGTTCCAGTTTGTCTCCTTTaGTGCCTAAGAAAGCCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: IPTRKEGSYLKLCNERFVPVCLL*CLRKPS Trigger: TGAAGGCTTTCTTAGGCAGCAAAGGAGACAAACTGG...AACAAACCTCTCATTACACAGTTTCAAGTAAGAGCCTTCTTTTCTTGTTGGTAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000051039.5 ENSMUST00000163586.9 ENSMUST00000177963.8 ENSMUST00000216329.2 ENSMUST00000217093.2 |
||
| CDS-3UTR CCA 90 bp | TCAAAGTTATGCTCCCAGTCTATAGCCATTTATTTTAATGACGTTCCATGTTCTAATACCACTCTTTTGTaGGGAAGATCCAGGGGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: SKLCSQSIAIYFNDVPCSNTTLL*GRSRGS Trigger: TGAACCCCTGGATCTTCCCCACAAAAGAGTGGTATT...AGAACATGGAACGTCATTAAAATAAATGGCTATAGACTGGGAGCATAACTTTGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000051039.5 ENSMUST00000163586.9 ENSMUST00000177963.8 ENSMUST00000216329.2 ENSMUST00000217093.2 |
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| CDS-3UTR CCA 90 bp | ATACCAACAAGAAAAGAAGGCTCTTACTTGAAACTGTGTAATGAGAGGTTTGTTGTACCTCCGGCTGCCTaGTTAGAATTATCATTGATG | + |
|
Preference number: 4 (lower is better) Translates to: IPTRKEGSYLKLCNERFVVPPAA*LELSLM Trigger: CATCAATGATAATTCTAACCAGGCAGCCGGAGGTAC...AACAAACCTCTCATTACACAGTTTCAAGTAAGAGCCTTCTTTTCTTGTTGGTAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000051039.5 ENSMUST00000163586.9 ENSMUST00000177963.8 ENSMUST00000216329.2 ENSMUST00000217093.2 |
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| CDS-3UTR GCA 90 bp | TCAAAGTTATGCTCCCAGTCTATAGCCATTTATTTTAATGACGTTCCATGTTCTAGTGAGACATCTGATTaGCGCAATAGACTGTCCATA | + |
|
Preference number: 4 (lower is better) Translates to: SKLCSQSIAIYFNDVPCSSETSD*RNRLSI Trigger: TATGGACAGTCTATTGCGGCAATCAGATGTCTCACT...AGAACATGGAACGTCATTAAAATAAATGGCTATAGACTGGGAGCATAACTTTGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000051039.5 ENSMUST00000163586.9 ENSMUST00000177963.8 ENSMUST00000216329.2 ENSMUST00000217093.2 |
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| CDS-3UTR GCA 90 bp | TCAAAGTTATGCTCCCAGTCTATAGCCATTTATTTTAATGACGTTCCATGTTCTGTTTGTCTCCTTTGCTaGCTAAGAAAGCCTTCAGTT | + |
|
Preference number: 4 (lower is better) Translates to: SKLCSQSIAIYFNDVPCSVCLLC*LRKPSV Trigger: AACTGAAGGCTTTCTTAGGCAGCAAAGGAGACAAAC...AGAACATGGAACGTCATTAAAATAAATGGCTATAGACTGGGAGCATAACTTTGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000051039.5 ENSMUST00000163586.9 ENSMUST00000177963.8 ENSMUST00000216329.2 ENSMUST00000217093.2 |
||
| CDS-3UTR GCA 90 bp | GCTAATGTTGGGTTTATATATGTAACTTCTCAATTCCATATTGAGACCCAGGTTGGATTGAGTTGCTCCTaGTATGGGAATCATAATGAA | + |
|
Preference number: 4 (lower is better) Translates to: ANVGFIYVTSQFHIETQVGLSCS*YGNHNE Trigger: TTCATTATGATTCCCATAGCAGGAGCAACTCAATCC...AACCTGGGTCTCAATATGGAATTGAGAAGTTACATATATAAACCCAACATTAGC 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000051039.5 ENSMUST00000163586.9 ENSMUST00000177963.8 |
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| CDS-3UTR CCA 90 bp | TACAGTGAAACTTCCCATTCAGAGAACACAGAGGATGACATTCTTACAGAACAACATGAAACTGACTATTaGCAAAGTATTCAAAGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: YSETSHSENTEDDILTEQHETDY*QSIQRQ Trigger: TTGCCTTTGAATACTTTGCCAATAGTCAGTTTCATG...TTGTTCTGTAAGAATGTCATCCTCTGTGTTCTCTGAATGGGAAGTTTCACTGTA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000051039.5 ENSMUST00000163586.9 ENSMUST00000177963.8 ENSMUST00000216329.2 ENSMUST00000217093.2 |
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| CDS-3UTR CCA 90 bp | GAATCACATCTTTGTGTTTTACATCCCATATACACTGCAAATTGTTATCGGGGTCATGAAACTGACTATTaGCAAAGTATTCAAAGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: ESHLCVLHPIYTANCYRGHETDY*QSIQRQ Trigger: TTGCCTTTGAATACTTTGCCAATAGTCAGTTTCATG...ACCCCGATAACAATTTGCAGTGTATATGGGATGTAAAACACAAAGATGTGATTC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000051039.5 ENSMUST00000163586.9 ENSMUST00000177963.8 |
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| 3UTR CAA 72 bp | ACATCTTTGTGTTTTACATCCCATATACACTGCAAATaGTTATCGGGGTCTAATTATTATGTGTGCCCAACT | + |
|
Preference number: 4 (lower is better) Translates to: TSLCFTSHIHCK*LSGSNYYVCPT Trigger: AGTTGGGCACACATAATAATTAGACCCCGATAACAATTTGCAGTGTATATGGGATGTAAAACACAAAGATGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000051039.5 ENSMUST00000163586.9 ENSMUST00000177963.8 |
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| CDS TCA 90 bp | GTGAGTAGCTGCAGCGGGGACTCTGGCTGCCGTCTAAAGAGACTCTaGCACAAGGCCTCGGTGTTACATATCACGTACATCCCACAGTCA | + |
|
Preference number: 5 (lower is better) Translates to: VSSCSGDSGCRLKRL*HKASVLHITYIPQS Trigger: TGACTGTGGGATGTACGTGATATGTAACACCGAGGCCTTGTGTCAGAGTCTCTTTAGACGGCAGCCAGAGTCCCCGCTGCAGCTACTCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000051039.5 ENSMUST00000163586.9 ENSMUST00000177963.8 ENSMUST00000216329.2 ENSMUST00000217093.2 |
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| CDS-3UTR CAA 90 bp | GGCTCCAGGGAACTGAGTACCTCTGTAGTTGCTGACTGGAGAGGTTATTTTGGGCCAATAATGTGGTCGTaGAGCCAGCTTGGAGGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: GSRELSTSVVADWRGYFGPIMWS*SQLGGS Trigger: GGACCCTCCAAGCTGGCTCAACGACCACATTATTGG...CCCAAAATAACCTCTCCAGTCAGCAACTACAGAGGTACTCAGTTCCCTGGAGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000051039.5 ENSMUST00000163586.9 ENSMUST00000177963.8 |
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| CDS-3UTR CAA 90 bp | CCACCTCCAGTCGGACGCCTCACTATGGCTGTGAAACAAAGATGTTGGTTCTTCCCTGCTTTGCATGGATaGAGTTGCTCCTGCTATGGG | + |
|
Preference number: 5 (lower is better) Translates to: PPPVGRLTMAVKQRCWFFPALHG*SCSCYG Trigger: CCCATAGCAGGAGCAACTCAATCCATGCAAAGCAGG...GAAGAACCAACATCTTTGTTTCACAGCCATAGTGAGGCGTCCGACTGGAGGTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000051039.5 ENSMUST00000163586.9 ENSMUST00000177963.8 ENSMUST00000216329.2 ENSMUST00000217093.2 |
||
| CDS-3UTR CAA 90 bp | TTAGAGCTGAGTCACCCACTCACTCAGGGAAACCAGAGATGCACCACACACCCGACCAGTTTGTCTCCTTaGCTGCCTAAGAAAGCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: LELSHPLTQGNQRCTTHPTSLSP*LPKKAF Trigger: GAAGGCTTTCTTAGGCAGCAAAGGAGACAAACTGGT...CGGGTGTGTGGTGCATCTCTGGTTTCCCTGAGTGAGTGGGTGACTCAGCTCTAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000051039.5 ENSMUST00000163586.9 ENSMUST00000177963.8 |
||
| CDS-3UTR CAA 90 bp | TTAGAGCTGAGTCACCCACTCACTCAGGGAAACCAGAGATGCACCACACACCCGTCCACAAAGACCAGTTaGTCTCCTTTGCTGCCTAAG | + |
|
Preference number: 5 (lower is better) Translates to: LELSHPLTQGNQRCTTHPSTKTS*SPLLPK Trigger: CTTAGGCAGCAAAGGAGACAAACTGGTCTTTGTGGA...CGGGTGTGTGGTGCATCTCTGGTTTCCCTGAGTGAGTGGGTGACTCAGCTCTAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000051039.5 ENSMUST00000163586.9 ENSMUST00000177963.8 |
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| CDS-3UTR CAA 90 bp | TTAGGTAATGATCCACCTCCAGTCGGACGCCTCACTATGGCTGTGAAACAAAGACCAATAATGTGGTCGTaGAGCCAGCTTGGAGGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: LGNDPPPVGRLTMAVKQRPIMWS*SQLGGS Trigger: GGACCCTCCAAGCTGGCTCAACGACCACATTATTGG...TCTTTGTTTCACAGCCATAGTGAGGCGTCCGACTGGAGGTGGATCATTACCTAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000051039.5 ENSMUST00000163586.9 ENSMUST00000177963.8 ENSMUST00000216329.2 ENSMUST00000217093.2 |
||
| CDS-3UTR CAA 90 bp | AAGTCTTCCTGCACACCACAGCAGGTGCTCTTCCTCAAAGTTATGCTCCCAGTCTCTCTGCTACCTGCTTaGCATGGATTGAGTTGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: KSSCTPQQVLFLKVMLPVSLLPA*HGLSCS Trigger: GGAGCAACTCAATCCATGCAAAGCAGGTAGCAGAGA...GACTGGGAGCATAACTTTGAGGAAGAGCACCTGCTGTGGTGTGCAGGAAGACTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000051039.5 ENSMUST00000163586.9 ENSMUST00000177963.8 ENSMUST00000216329.2 ENSMUST00000217093.2 |
||
| CDS CCA 90 bp | AGGAACATGGCAATTTCTGCAGGGCTGCTGGTGCACTTAATGAACTaGGTGACTTCAGGGCTGATGAAACAGACATGGTCTGAGCAGTCA | + |
|
Preference number: 5 (lower is better) Translates to: RNMAISAGLLVHLMN*VTSGLMKQTWSEQS Trigger: TGACTGCTCAGACCATGTCTGTTTCATCAGCCCTGAAGTCACCCAGTTCATTAAGTGCACCAGCAGCCCTGCAGAAATTGCCATGTTCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000051039.5 ENSMUST00000163586.9 ENSMUST00000177963.8 ENSMUST00000213257.2 ENSMUST00000216329.2 ENSMUST00000217093.2 |
||
| CDS-3UTR CAA 90 bp | TCATCTACTAGTGGTTTTCCCTCAGGCACTGAGGCTGTCACCATAGAGAAAGGCGTCATAGCTGTTCTCTaGAGCTGGGGCTTTCTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: SSTSGFPSGTEAVTIEKGVIAVL*SWGFLF Trigger: GAAGAGAAAGCCCCAGCTCAAGAGAACAGCTATGAC...GCCTTTCTCTATGGTGACAGCCTCAGTGCCTGAGGGAAAACCACTAGTAGATGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000051039.5 ENSMUST00000163586.9 ENSMUST00000177963.8 ENSMUST00000216329.2 ENSMUST00000217093.2 |
||
| CDS-3UTR CAA 90 bp | CTTTTACCATCTTCCTCTTCCTGGCTCCAGGGAACTGAGTACCTCTGTAGTTGCACCAGTTTGTCTCCTTaGCTGCCTAAGAAAGCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: LLPSSSSWLQGTEYLCSCTSLSP*LPKKAF Trigger: GAAGGCTTTCTTAGGCAGCAAAGGAGACAAACTGGT...GCAACTACAGAGGTACTCAGTTCCCTGGAGCCAGGAAGAGGAAGATGGTAAAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000051039.5 ENSMUST00000163586.9 ENSMUST00000177963.8 |
||
| CDS-3UTR CAA 90 bp | TCATCTACTAGTGGTTTTCCCTCAGGCACTGAGGCTGTCACCATAGAGAAAGGCTCCACAAAGACCAGTTaGTCTCCTTTGCTGCCTAAG | + |
|
Preference number: 5 (lower is better) Translates to: SSTSGFPSGTEAVTIEKGSTKTS*SPLLPK Trigger: CTTAGGCAGCAAAGGAGACAAACTGGTCTTTGTGGA...GCCTTTCTCTATGGTGACAGCCTCAGTGCCTGAGGGAAAACCACTAGTAGATGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000051039.5 ENSMUST00000163586.9 ENSMUST00000177963.8 ENSMUST00000216329.2 ENSMUST00000217093.2 |
||
| CDS CCA 90 bp | GTTACATATCACGTACATCCCACAGTCATAGCTGTTCTCTTGAGCTaGGGCTTTCTCTTCCACAAAGACCAGTTTGTCTCCTTTGCTGCC | + |
|
Preference number: 5 (lower is better) Translates to: VTYHVHPTVIAVLLS*GFLFHKDQFVSFAA Trigger: GGCAGCAAAGGAGACAAACTGGTCTTTGTGGAAGAGAAAGCCCCAGCTCAAGAGAACAGCTATGACTGTGGGATGTACGTGATATGTAAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000051039.5 ENSMUST00000163586.9 ENSMUST00000177963.8 ENSMUST00000213257.2 ENSMUST00000216329.2 ENSMUST00000217093.2 |
||
| CDS-3UTR CAA 90 bp | TTGGAATTGAGTTCAAGTCTTCCTGCACACCACAGCAGGTGCTCTTCCTCAAAGACCAGTTTGTCTCCTTaGCTGCCTAAGAAAGCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: LELSSSLPAHHSRCSSSKTSLSP*LPKKAF Trigger: GAAGGCTTTCTTAGGCAGCAAAGGAGACAAACTGGT...CTTTGAGGAAGAGCACCTGCTGTGGTGTGCAGGAAGACTTGAACTCAATTCCAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000051039.5 ENSMUST00000163586.9 ENSMUST00000177963.8 ENSMUST00000216329.2 ENSMUST00000217093.2 |
||
| CDS-3UTR CAA 90 bp | TTAGGTAATGATCCACCTCCAGTCGGACGCCTCACTATGGCTGTGAAACAAAGATCCACAAAGACCAGTTaGTCTCCTTTGCTGCCTAAG | + |
|
Preference number: 5 (lower is better) Translates to: LGNDPPPVGRLTMAVKQRSTKTS*SPLLPK Trigger: CTTAGGCAGCAAAGGAGACAAACTGGTCTTTGTGGA...TCTTTGTTTCACAGCCATAGTGAGGCGTCCGACTGGAGGTGGATCATTACCTAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000051039.5 ENSMUST00000163586.9 ENSMUST00000177963.8 ENSMUST00000216329.2 ENSMUST00000217093.2 |
||
| CDS-3UTR CAA 90 bp | AGGTGTACATTGGGAGACAGGACAACTTACAAGGAGCCAATCCAATTCTCTCATACCAGTTTGTCTCCTTaGCTGCCTAAGAAAGCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: RCTLGDRTTYKEPIQFSHTSLSP*LPKKAF Trigger: GAAGGCTTTCTTAGGCAGCAAAGGAGACAAACTGGT...ATGAGAGAATTGGATTGGCTCCTTGTAAGTTGTCCTGTCTCCCAATGTACACCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000051039.5 ENSMUST00000163586.9 ENSMUST00000177963.8 |
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| CDS-3UTR CAA 90 bp | TCAAAGTTATGCTCCCAGTCTATAGCCATTTATTTTAATGACGTTCCATGTTCTCCAATAATGTGGTCGTaGAGCCAGCTTGGAGGGTCC | + |
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Preference number: 5 (lower is better) Translates to: SKLCSQSIAIYFNDVPCSPIMWS*SQLGGS Trigger: GGACCCTCCAAGCTGGCTCAACGACCACATTATTGG...AGAACATGGAACGTCATTAAAATAAATGGCTATAGACTGGGAGCATAACTTTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000051039.5 ENSMUST00000163586.9 ENSMUST00000177963.8 ENSMUST00000216329.2 ENSMUST00000217093.2 |
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| CDS-3UTR CAA 90 bp | TCTCTTTCATTTATGGCTCACTGCCAATTTCTAACATTTTCCTGCCTATCTTTCCCTGCTTTGCATGGATaGAGTTGCTCCTGCTATGGG | + |
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Preference number: 5 (lower is better) Translates to: SLSFMAHCQFLTFSCLSFPALHG*SCSCYG Trigger: CCCATAGCAGGAGCAACTCAATCCATGCAAAGCAGG...GAAAGATAGGCAGGAAAATGTTAGAAATTGGCAGTGAGCCATAAATGAAAGAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000051039.5 ENSMUST00000163586.9 ENSMUST00000177963.8 |
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| CDS-3UTR CAA 90 bp | TACAGTGAAACTTCCCATTCAGAGAACACAGAGGATGACATTCTTACAGAACAAGTCATAGCTGTTCTCTaGAGCTGGGGCTTTCTCTTC | + |
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Preference number: 5 (lower is better) Translates to: YSETSHSENTEDDILTEQVIAVL*SWGFLF Trigger: GAAGAGAAAGCCCCAGCTCAAGAGAACAGCTATGAC...TTGTTCTGTAAGAATGTCATCCTCTGTGTTCTCTGAATGGGAAGTTTCACTGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000051039.5 ENSMUST00000163586.9 ENSMUST00000177963.8 ENSMUST00000216329.2 ENSMUST00000217093.2 |
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| CDS TCA 90 bp | CTTAATGAACTGGGTGACTTCAGGGCTGATGAAACAGACATGGTCTaGGCAGTCATGAAACTGACTATTGGCAAAGTATTCAAAGGCAAA | + |
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Preference number: 5 (lower is better) Translates to: LNELGDFRADETDMV*AVMKLTIGKVFKGK Trigger: TTTGCCTTTGAATACTTTGCCAATAGTCAGTTTCATGACTGCTCAGACCATGTCTGTTTCATCAGCCCTGAAGTCACCCAGTTCATTAAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000051039.5 ENSMUST00000163586.9 ENSMUST00000177963.8 ENSMUST00000213257.2 ENSMUST00000216329.2 ENSMUST00000217093.2 |
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| CDS-3UTR CAA 90 bp | GCTAATGTTGGGTTTATATATGTAACTTCTCAATTCCATATTGAGACCCAGGTTCCTGCTTTGCATGGATaGAGTTGCTCCTGCTATGGG | + |
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Preference number: 5 (lower is better) Translates to: ANVGFIYVTSQFHIETQVPALHG*SCSCYG Trigger: CCCATAGCAGGAGCAACTCAATCCATGCAAAGCAGG...AACCTGGGTCTCAATATGGAATTGAGAAGTTACATATATAAACCCAACATTAGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000051039.5 ENSMUST00000163586.9 ENSMUST00000177963.8 |
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| CDS-3UTR CAA 90 bp | ATACCAACAAGAAAAGAAGGCTCTTACTTGAAACTGTGTAATGAGAGGTTTGTTCCTGCTTTGCATGGATaGAGTTGCTCCTGCTATGGG | + |
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Preference number: 5 (lower is better) Translates to: IPTRKEGSYLKLCNERFVPALHG*SCSCYG Trigger: CCCATAGCAGGAGCAACTCAATCCATGCAAAGCAGG...AACAAACCTCTCATTACACAGTTTCAAGTAAGAGCCTTCTTTTCTTGTTGGTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000051039.5 ENSMUST00000163586.9 ENSMUST00000177963.8 ENSMUST00000216329.2 ENSMUST00000217093.2 |
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| CDS-3UTR CAA 90 bp | GAATCACATCTTTGTGTTTTACATCCCATATACACTGCAAATTGTTATCGGGGTTCTCTGCTACCTGCTTaGCATGGATTGAGTTGCTCC | + |
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Preference number: 5 (lower is better) Translates to: ESHLCVLHPIYTANCYRGSLLPA*HGLSCS Trigger: GGAGCAACTCAATCCATGCAAAGCAGGTAGCAGAGA...ACCCCGATAACAATTTGCAGTGTATATGGGATGTAAAACACAAAGATGTGATTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000051039.5 ENSMUST00000163586.9 ENSMUST00000177963.8 |
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| CDS-3UTR CAA 90 bp | GAATCACATCTTTGTGTTTTACATCCCATATACACTGCAAATTGTTATCGGGGTGTCATAGCTGTTCTCTaGAGCTGGGGCTTTCTCTTC | + |
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Preference number: 5 (lower is better) Translates to: ESHLCVLHPIYTANCYRGVIAVL*SWGFLF Trigger: GAAGAGAAAGCCCCAGCTCAAGAGAACAGCTATGAC...ACCCCGATAACAATTTGCAGTGTATATGGGATGTAAAACACAAAGATGTGATTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000051039.5 ENSMUST00000163586.9 ENSMUST00000177963.8 |
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| CDS-3UTR CAA 90 bp | TACAGTGAAACTTCCCATTCAGAGAACACAGAGGATGACATTCTTACAGAACAATTTGCATGGATTGAGTaGCTCCTGCTATGGGAATCA | + |
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Preference number: 5 (lower is better) Translates to: YSETSHSENTEDDILTEQFAWIE*LLLWES Trigger: TGATTCCCATAGCAGGAGCAACTCAATCCATGCAAA...TTGTTCTGTAAGAATGTCATCCTCTGTGTTCTCTGAATGGGAAGTTTCACTGTA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000051039.5 ENSMUST00000163586.9 ENSMUST00000177963.8 ENSMUST00000216329.2 ENSMUST00000217093.2 |
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| CDS-3UTR CAA 90 bp | ATACCAACAAGAAAAGAAGGCTCTTACTTGAAACTGTGTAATGAGAGGTTTGTTTCTCTGCTACCTGCTTaGCATGGATTGAGTTGCTCC | + |
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Preference number: 5 (lower is better) Translates to: IPTRKEGSYLKLCNERFVSLLPA*HGLSCS Trigger: GGAGCAACTCAATCCATGCAAAGCAGGTAGCAGAGA...AACAAACCTCTCATTACACAGTTTCAAGTAAGAGCCTTCTTTTCTTGTTGGTAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000051039.5 ENSMUST00000163586.9 ENSMUST00000177963.8 ENSMUST00000216329.2 ENSMUST00000217093.2 |
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| CDS-3UTR CAA 90 bp | TCAAAGTTATGCTCCCAGTCTATAGCCATTTATTTTAATGACGTTCCATGTTCTTCTCTGCTACCTGCTTaGCATGGATTGAGTTGCTCC | + |
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Preference number: 5 (lower is better) Translates to: SKLCSQSIAIYFNDVPCSSLLPA*HGLSCS Trigger: GGAGCAACTCAATCCATGCAAAGCAGGTAGCAGAGA...AGAACATGGAACGTCATTAAAATAAATGGCTATAGACTGGGAGCATAACTTTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000051039.5 ENSMUST00000163586.9 ENSMUST00000177963.8 ENSMUST00000216329.2 ENSMUST00000217093.2 |
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| CDS-3UTR CAA 90 bp | GCTAATGTTGGGTTTATATATGTAACTTCTCAATTCCATATTGAGACCCAGGTTGTCATAGCTGTTCTCTaGAGCTGGGGCTTTCTCTTC | + |
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Preference number: 5 (lower is better) Translates to: ANVGFIYVTSQFHIETQVVIAVL*SWGFLF Trigger: GAAGAGAAAGCCCCAGCTCAAGAGAACAGCTATGAC...AACCTGGGTCTCAATATGGAATTGAGAAGTTACATATATAAACCCAACATTAGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000051039.5 ENSMUST00000163586.9 ENSMUST00000177963.8 |
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| CDS-3UTR CAA 90 bp | TCAAAGTTATGCTCCCAGTCTATAGCCATTTATTTTAATGACGTTCCATGTTCTGTCATAGCTGTTCTCTaGAGCTGGGGCTTTCTCTTC | + |
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Preference number: 5 (lower is better) Translates to: SKLCSQSIAIYFNDVPCSVIAVL*SWGFLF Trigger: GAAGAGAAAGCCCCAGCTCAAGAGAACAGCTATGAC...AGAACATGGAACGTCATTAAAATAAATGGCTATAGACTGGGAGCATAACTTTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000051039.5 ENSMUST00000163586.9 ENSMUST00000177963.8 ENSMUST00000216329.2 ENSMUST00000217093.2 |
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| CDS-3UTR CAA 90 bp | TACAGTGAAACTTCCCATTCAGAGAACACAGAGGATGACATTCTTACAGAACAAAGGGTCCATCTTGTATaGAGCAGGGATTCTCAGAAA | + |
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Preference number: 5 (lower is better) Translates to: YSETSHSENTEDDILTEQRVHLV*SRDSQK Trigger: TTTCTGAGAATCCCTGCTCAATACAAGATGGACCCT...TTGTTCTGTAAGAATGTCATCCTCTGTGTTCTCTGAATGGGAAGTTTCACTGTA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216329.2 |
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| CDS-3UTR CAA 90 bp | TCAAAGTTATGCTCCCAGTCTATAGCCATTTATTTTAATGACGTTCCATGTTCTACCAGTTTGTCTCCTTaGCTGCCTAAGAAAGCCTTC | + |
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Preference number: 5 (lower is better) Translates to: SKLCSQSIAIYFNDVPCSTSLSP*LPKKAF Trigger: GAAGGCTTTCTTAGGCAGCAAAGGAGACAAACTGGT...AGAACATGGAACGTCATTAAAATAAATGGCTATAGACTGGGAGCATAACTTTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000051039.5 ENSMUST00000163586.9 ENSMUST00000177963.8 ENSMUST00000216329.2 ENSMUST00000217093.2 |
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| CDS-3UTR CAA 90 bp | TCAAAGTTATGCTCCCAGTCTATAGCCATTTATTTTAATGACGTTCCATGTTCTTCCACAAAGACCAGTTaGTCTCCTTTGCTGCCTAAG | + |
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Preference number: 5 (lower is better) Translates to: SKLCSQSIAIYFNDVPCSSTKTS*SPLLPK Trigger: CTTAGGCAGCAAAGGAGACAAACTGGTCTTTGTGGA...AGAACATGGAACGTCATTAAAATAAATGGCTATAGACTGGGAGCATAACTTTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000051039.5 ENSMUST00000163586.9 ENSMUST00000177963.8 ENSMUST00000216329.2 ENSMUST00000217093.2 |
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| CDS-3UTR CAA 90 bp | ATACCAACAAGAAAAGAAGGCTCTTACTTGAAACTGTGTAATGAGAGGTTTGTTTCCACAAAGACCAGTTaGTCTCCTTTGCTGCCTAAG | + |
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Preference number: 5 (lower is better) Translates to: IPTRKEGSYLKLCNERFVSTKTS*SPLLPK Trigger: CTTAGGCAGCAAAGGAGACAAACTGGTCTTTGTGGA...AACAAACCTCTCATTACACAGTTTCAAGTAAGAGCCTTCTTTTCTTGTTGGTAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000051039.5 ENSMUST00000163586.9 ENSMUST00000177963.8 ENSMUST00000216329.2 ENSMUST00000217093.2 |
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| CDS-3UTR CAA 90 bp | GCTAATGTTGGGTTTATATATGTAACTTCTCAATTCCATATTGAGACCCAGGTTTTTGCATGGATTGAGTaGCTCCTGCTATGGGAATCA | + |
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Preference number: 5 (lower is better) Translates to: ANVGFIYVTSQFHIETQVFAWIE*LLLWES Trigger: TGATTCCCATAGCAGGAGCAACTCAATCCATGCAAA...AACCTGGGTCTCAATATGGAATTGAGAAGTTACATATATAAACCCAACATTAGC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000051039.5 ENSMUST00000163586.9 ENSMUST00000177963.8 |
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| CDS GCA 72 bp | CCTCTCTTCTTTGTGATGTATGTCGGGGTGAGTAGCTaGAGCGGGGACTCTGGCTGCCGTCTAAAGAGACTC | + |
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Preference number: 6 (lower is better) Translates to: PLFFVMYVGVSS*SGDSGCRLKRL Trigger: GAGTCTCTTTAGACGGCAGCCAGAGTCCCCGCTGCAGCTACTCACCCCGACATACATCACAAAGAAGAGAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000051039.5 ENSMUST00000163586.9 ENSMUST00000177963.8 ENSMUST00000216329.2 ENSMUST00000217093.2 |
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| CDS TCA 72 bp | TGCAGCGGGGACTCTGGCTGCCGTCTAAAGAGACTCTaGCACAAGGCCTCGGTGTTACATATCACGTACATC | + |
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Preference number: 6 (lower is better) Translates to: CSGDSGCRLKRL*HKASVLHITYI Trigger: GATGTACGTGATATGTAACACCGAGGCCTTGTGTCAGAGTCTCTTTAGACGGCAGCCAGAGTCCCCGCTGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000051039.5 ENSMUST00000163586.9 ENSMUST00000177963.8 ENSMUST00000213257.2 ENSMUST00000216329.2 ENSMUST00000217093.2 |
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| CDS CCA 72 bp | CACGTACATCCCACAGTCATAGCTGTTCTCTTGAGCTaGGGCTTTCTCTTCCACAAAGACCAGTTTGTCTCC | + |
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Preference number: 6 (lower is better) Translates to: HVHPTVIAVLLS*GFLFHKDQFVS Trigger: GGAGACAAACTGGTCTTTGTGGAAGAGAAAGCCCCAGCTCAAGAGAACAGCTATGACTGTGGGATGTACGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000051039.5 ENSMUST00000163586.9 ENSMUST00000177963.8 ENSMUST00000213257.2 ENSMUST00000216329.2 ENSMUST00000217093.2 |
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| CDS CAA 72 bp | GGGGCTTTCTCTTCCACAAAGACCAGTTTGTCTCCTTaGCTGCCTAAGAAAGCCTTCAGTTTCTCTGCTACC | + |
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Preference number: 6 (lower is better) Translates to: GAFSSTKTSLSP*LPKKAFSFSAT Trigger: GGTAGCAGAGAAACTGAAGGCTTTCTTAGGCAGCAAAGGAGACAAACTGGTCTTTGTGGAAGAGAAAGCCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000051039.5 ENSMUST00000163586.9 ENSMUST00000177963.8 ENSMUST00000213257.2 ENSMUST00000216329.2 ENSMUST00000217093.2 |
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| CDS GCA 72 bp | TTGCTGCCTAAGAAAGCCTTCAGTTTCTCTGCTACCTaGTTTGCATGGATTGAGTTGCTCCTGCTATGGGAA | + |
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Preference number: 6 (lower is better) Translates to: LLPKKAFSFSAT*FAWIELLLLWE Trigger: TTCCCATAGCAGGAGCAACTCAATCCATGCAAAGCAGGTAGCAGAGAAACTGAAGGCTTTCTTAGGCAGCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000051039.5 ENSMUST00000163586.9 ENSMUST00000177963.8 ENSMUST00000213257.2 ENSMUST00000216329.2 ENSMUST00000217093.2 |
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| CDS GCA 72 bp | GGGCTTTCTCTTCCACAAAGACCAGTTTGTCTCCTTTaGTGCCTAAGAAAGCCTTCAGTTTCTCTGCTACCT | + |
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Preference number: 6 (lower is better) Translates to: GLSLPQRPVCLL*CLRKPSVSLLP Trigger: AGGTAGCAGAGAAACTGAAGGCTTTCTTAGGCAGCAAAGGAGACAAACTGGTCTTTGTGGAAGAGAAAGCCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000051039.5 ENSMUST00000163586.9 ENSMUST00000177963.8 ENSMUST00000213257.2 ENSMUST00000216329.2 ENSMUST00000217093.2 |
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| CDS GCA 72 bp | CTTTCTCTTCCACAAAGACCAGTTTGTCTCCTTTGCTaGCTAAGAAAGCCTTCAGTTTCTCTGCTACCTGCT | + |
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Preference number: 6 (lower is better) Translates to: LSLPQRPVCLLC*LRKPSVSLLPA Trigger: AGCAGGTAGCAGAGAAACTGAAGGCTTTCTTAGGCAGCAAAGGAGACAAACTGGTCTTTGTGGAAGAGAAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000051039.5 ENSMUST00000163586.9 ENSMUST00000177963.8 ENSMUST00000213257.2 ENSMUST00000216329.2 ENSMUST00000217093.2 |
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| CDS CCA 72 bp | CTATTGGCAAAGTATTCAAAGGCAAACCCAATAATGTaGTCGTTGAGCCAGCTTGGAGGGTCCAATAGTGAG | + |
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Preference number: 6 (lower is better) Translates to: LLAKYSKANPIM*SLSQLGGSNSE Trigger: CTCACTATTGGACCCTCCAAGCTGGCTCAACGACCACATTATTGGGTTTGCCTTTGAATACTTTGCCAATAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000051039.5 ENSMUST00000163586.9 ENSMUST00000177963.8 ENSMUST00000213257.2 ENSMUST00000216329.2 ENSMUST00000217093.2 |
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| CDS CAA 72 bp | GCAAAGTATTCAAAGGCAAACCCAATAATGTGGTCGTaGAGCCAGCTTGGAGGGTCCAATAGTGAGACATCT | + |
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Preference number: 6 (lower is better) Translates to: AKYSKANPIMWS*SQLGGSNSETS Trigger: AGATGTCTCACTATTGGACCCTCCAAGCTGGCTCAACGACCACATTATTGGGTTTGCCTTTGAATACTTTGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000051039.5 ENSMUST00000163586.9 ENSMUST00000177963.8 ENSMUST00000213257.2 ENSMUST00000216329.2 ENSMUST00000217093.2 |
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| CDS CAA 72 bp | TGCCTAAGAAAGCCTTCAGTTTCTCTGCTACCTGCTTaGCATGGATTGAGTTGCTCCTGCTATGGGAATCAT | + |
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Preference number: 6 (lower is better) Translates to: CLRKPSVSLLPA*HGLSCSCYGNH Trigger: ATGATTCCCATAGCAGGAGCAACTCAATCCATGCAAAGCAGGTAGCAGAGAAACTGAAGGCTTTCTTAGGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000051039.5 ENSMUST00000163586.9 ENSMUST00000177963.8 ENSMUST00000213257.2 ENSMUST00000216329.2 ENSMUST00000217093.2 |
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| CDS CAA 90 bp | CTCCTTTGCTGCCTAAGAAAGCCTTCAGTTTCTCTGCTACCTGCTTaGCATGGATTGAGTTGCTCCTGCTATGGGAATCATAATGAAAGA | + |
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Preference number: 6 (lower is better) Translates to: LLCCLRKPSVSLLPA*HGLSCSCYGNHNER Trigger: TCTTTCATTATGATTCCCATAGCAGGAGCAACTCAATCCATGCAAAGCAGGTAGCAGAGAAACTGAAGGCTTTCTTAGGCAGCAAAGGAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000051039.5 ENSMUST00000163586.9 ENSMUST00000177963.8 ENSMUST00000213257.2 ENSMUST00000216329.2 ENSMUST00000217093.2 |
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| CDS GCA 72 bp | TCTCTGCTACCTGCTTTGCATGGATTGAGTTGCTCCTaGTATGGGAATCATAATGAAAGAAGCTATTTTTAT | + |
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Preference number: 6 (lower is better) Translates to: SLLPALHGLSCS*YGNHNERSYFY Trigger: ATAAAAATAGCTTCTTTCATTATGATTCCCATAGCAGGAGCAACTCAATCCATGCAAAGCAGGTAGCAGAGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000051039.5 ENSMUST00000163586.9 ENSMUST00000177963.8 ENSMUST00000213257.2 ENSMUST00000216329.2 ENSMUST00000217093.2 |
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