Pregenerated sensors for SENP6 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000034252Ensembl transcript IDs: ENSMUST00000037484.15, ENSMUST00000164859.8, ENSMUST00000175999.8, ENSMUST00000176360.8
Found 197 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GGGGAGCCTTCCAGGCCCAGCCTCCTCGTCACTCTGAGCCACCGCTaGCGCTGGCGTACTGCTCTGCTCCGTCCCCTAAGGACGTCTCTG | + |
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Preference number: 1 (lower is better) Translates to: GEPSRPSLLVTLSHR*RWRTALLRPLRTSL Trigger: CAGAGACGTCCTTAGGGGACGGAGCAGAGCAGTACGCCAGCGCCAGCGGTGGCTCAGAGTGACGAGGAGGCTGGGCCTGGAAGGCTCCCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000175999.8 |
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| 3UTR GCA 90 bp | AAGCTGCCGTTGCCAGGACAGCCTTCACCTGAGTTGCTGGGGGTATaGTGGAGCAGGGTCGCCTCACTAGCACAAGTCAAGGTGCACTGT | + |
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Preference number: 1 (lower is better) Translates to: KLPLPGQPSPELLGV*WSRVASLAQVKVHC Trigger: ACAGTGCACCTTGACTTGTGCTAGTGAGGCGACCCTGCTCCAGCATACCCCCAGCAACTCAGGTGAAGGCTGTCCTGGCAACGGCAGCTT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000037484.15 ENSMUST00000175999.8 |
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| 3UTR CCA 90 bp | CTGCCGTTGCCAGGACAGCCTTCACCTGAGTTGCTGGGGGTATGCTaGAGCAGGGTCGCCTCACTAGCACAAGTCAAGGTGCACTGTCTT | + |
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Preference number: 1 (lower is better) Translates to: LPLPGQPSPELLGVC*SRVASLAQVKVHCL Trigger: AAGACAGTGCACCTTGACTTGTGCTAGTGAGGCGACCCTGCTCCAGCATACCCCCAGCAACTCAGGTGAAGGCTGTCCTGGCAACGGCAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000037484.15 ENSMUST00000175999.8 |
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| 3UTR TCA 90 bp | TCGGTCCTGATTGCTCTGAGCCGCTGTTCTGATGCCTGGCGTCTGTaGGTGAGCATGATGGAAGCGCCTCCCATGAACCACAGTTCCAGA | + |
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Preference number: 1 (lower is better) Translates to: SVLIALSRCSDAWRL*VSMMEAPPMNHSSR Trigger: TCTGGAACTGTGGTTCATGGGAGGCGCTTCCATCATGCTCACTCACAGACGCCAGGCATCAGAACAGCGGCTCAGAGCAATCAGGACCGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175999.8 |
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| 3UTR TCA 90 bp | AAGGAGTCCGTCATCACTGCTATCATCCGGGTCATCCTGATCCTCTaGGAAGTCAATGAGCTCATCTTCAAGCAGCTTCCCACCGTCTGC | + |
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Preference number: 1 (lower is better) Translates to: KESVITAIIRVILIL*EVNELIFKQLPTVC Trigger: GCAGACGGTGGGAAGCTGCTTGAAGATGAGCTCATTGACTTCTCAGAGGATCAGGATGACCCGGATGATAGCAGTGATGACGGACTCCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175999.8 |
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| 3UTR TCA 90 bp | CATCACTGCTATCATCCGGGTCATCCTGATCCTCTGAGAAGTCAATaGGCTCATCTTCAAGCAGCTTCCCACCGTCTGCTGACTGATCAC | + |
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Preference number: 1 (lower is better) Translates to: HHCYHPGHPDPLRSQ*AHLQAASHRLLTDH Trigger: GTGATCAGTCAGCAGACGGTGGGAAGCTGCTTGAAGATGAGCTCATTGACTTCTCAGAGGATCAGGATGACCCGGATGATAGCAGTGATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175999.8 |
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| 3UTR TCA 90 bp | TGCACTCATCACCCAACTACAGGCCCAGCCCCACAGCTTCTCAACTaGAAGAGGAAACTGAAAATGAGAGCTTCTGCTGCACTATGCAAT | + |
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Preference number: 1 (lower is better) Translates to: CTHHPTTGPAPQLLN*KRKLKMRASAALCN Trigger: ATTGCATAGTGCAGCAGAAGCTCTCATTTTCAGTTTCCTCTTTCAGTTGAGAAGCTGTGGGGCTGGGCCTGTAGTTGGGTGATGAGTGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037484.15 |
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| 3UTR GCA 90 bp | ACAATGGTATTTAACTCAGGCTCTGCTGGACTGCTTCTGGGTTCCTaGTCTGCTCTACAGGCATCTGCATTTAGTGCAGCTTCAACTTTT | + |
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Preference number: 1 (lower is better) Translates to: TMVFNSGSAGLLLGS*SALQASAFSAASTF Trigger: AAAAGTTGAAGCTGCACTAAATGCAGATGCCTGTAGAGCAGAGCAGGAACCCAGAAGCAGTCCAGCAGAGCCTGAGTTAAATACCATTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175999.8 |
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| 3UTR GCA 90 bp | GAAAACTGTTCCTTAACTAGTTCTGTCATCCAGGCTGCAGCACACTaGAAGATGAACTGCAAAGGTCCTGTTGGATATTTGAGATTCAAG | + |
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Preference number: 1 (lower is better) Translates to: ENCSLTSSVIQAAAH*KMNCKGPVGYLRFK Trigger: CTTGAATCTCAAATATCCAACAGGACCTTTGCAGTTCATCTTGCAGTGTGCTGCAGCCTGGATGACAGAACTAGTTAAGGAACAGTTTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037484.15 ENSMUST00000175999.8 |
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| 3UTR CCA 90 bp | TCATCCCGGAGGCCATTCTCACTTTGGGTTCTATCACAAATGTCCTaGCACGTAGATTCTCCGTTACTTGGTTCTTCATTTTCATTGATA | + |
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Preference number: 1 (lower is better) Translates to: SSRRPFSLWVLSQMS*HVDSPLLGSSFSLI Trigger: TATCAATGAAAATGAAGAACCAAGTAACGGAGAATCTACGTGCCAGGACATTTGTGATAGAACCCAAAGTGAGAATGGCCTCCGGGATGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000175999.8 |
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| 3UTR TCA 90 bp | ACGACACAGTTTTCACTTTGTTCTCTTTTTGCGCGCAGTTTCCTTTaGTGCTCTCTTCATAGCTTCTTGTACAGGCAACAAGTCTGCTAT | + |
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Preference number: 1 (lower is better) Translates to: TTQFSLCSLFARSFL*CSLHSFLYRQQVCY Trigger: ATAGCAGACTTGTTGCCTGTACAAGAAGCTATGAAGAGAGCATCAAAGGAAACTGCGCGCAAAAAGAGAACAAAGTGAAAACTGTGTCGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000175999.8 |
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| 3UTR TCA 90 bp | TGGAGCAGGGTCGCCTCACTAGCACAAGTCAAGGTGCACTGTCTTTaGTTGCTCTTAATGGTGTTTAAGTATTTGTGTAAAATTATGAAT | + |
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Preference number: 1 (lower is better) Translates to: WSRVASLAQVKVHCL*LLLMVFKYLCKIMN Trigger: ATTCATAATTTTACACAAATACTTAAACACCATTAAGAGCAATCAAAGACAGTGCACCTTGACTTGTGCTAGTGAGGCGACCCTGCTCCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037484.15 ENSMUST00000175999.8 |
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| 3UTR-3UTR CCA 90 bp | GGGGTATGCTGGAGCAGGGTCGCCTCACTAGCACAAGTCAAGGTGCACTGTCTTTGCTGTGTCTGTCACTaGGAAGGGGGAGCCTTCCAG | + |
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Preference number: 2 (lower is better) Translates to: GVCWSRVASLAQVKVHCLCCVCH*EGGAFQ Trigger: CTGGAAGGCTCCCCCTTCCCAGTGACAGACACAGCA...AAGACAGTGCACCTTGACTTGTGCTAGTGAGGCGACCCTGCTCCAGCATACCCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000037484.15 ENSMUST00000175999.8 |
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| 3UTR CAA 90 bp | TATTTGAGATTCAAGCTGCCGTTGCCAGGACAGCCTTCACCTGAGTaGCTGGGGGTATGCTGGAGCAGGGTCGCCTCACTAGCACAAGTC | + |
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Preference number: 2 (lower is better) Translates to: YLRFKLPLPGQPSPE*LGVCWSRVASLAQV Trigger: GACTTGTGCTAGTGAGGCGACCCTGCTCCAGCATACCCCCAGCAACTCAGGTGAAGGCTGTCCTGGCAACGGCAGCTTGAATCTCAAATA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000037484.15 ENSMUST00000175999.8 |
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| 3UTR-3UTR GCA 90 bp | GGGGTATGCTGGAGCAGGGTCGCCTCACTAGCACAAGTCAAGGTGCACTGTCTTTCCCCCAAGAGTAAATaGTGTGTCTGTCACTGGGAA | + |
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Preference number: 2 (lower is better) Translates to: GVCWSRVASLAQVKVHCLSPKSK*CVCHWE Trigger: TTCCCAGTGACAGACACAGCATTTACTCTTGGGGGA...AAGACAGTGCACCTTGACTTGTGCTAGTGAGGCGACCCTGCTCCAGCATACCCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000037484.15 ENSMUST00000175999.8 |
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| 3UTR CAA 90 bp | ATGAACTGCAAAGGTCCTGTTGGATATTTGAGATTCAAGCTGCCGTaGCCAGGACAGCCTTCACCTGAGTTGCTGGGGGTATGCTGGAGC | + |
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Preference number: 2 (lower is better) Translates to: MNCKGPVGYLRFKLP*PGQPSPELLGVCWS Trigger: GCTCCAGCATACCCCCAGCAACTCAGGTGAAGGCTGTCCTGGCAACGGCAGCTTGAATCTCAAATATCCAACAGGACCTTTGCAGTTCAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000037484.15 ENSMUST00000175999.8 |
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| 3UTR-3UTR GCA 90 bp | ATGAACTGCAAAGGTCCTGTTGGATATTTGAGATTCAAGCTGCCGTTGCCAGGAGAGTTGCTGGGGGTATaGTGGAGCAGGGTCGCCTCA | + |
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Preference number: 2 (lower is better) Translates to: MNCKGPVGYLRFKLPLPGELLGV*WSRVAS Trigger: TGAGGCGACCCTGCTCCAGCATACCCCCAGCAACTC...TCCTGGCAACGGCAGCTTGAATCTCAAATATCCAACAGGACCTTTGCAGTTCAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000037484.15 ENSMUST00000175999.8 |
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| 3UTR CAA 90 bp | GCTGCAGCACACTGCAAGATGAACTGCAAAGGTCCTGTTGGATATTaGAGATTCAAGCTGCCGTTGCCAGGACAGCCTTCACCTGAGTTG | + |
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Preference number: 2 (lower is better) Translates to: AAAHCKMNCKGPVGY*RFKLPLPGQPSPEL Trigger: CAACTCAGGTGAAGGCTGTCCTGGCAACGGCAGCTTGAATCTCAAATATCCAACAGGACCTTTGCAGTTCATCTTGCAGTGTGCTGCAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037484.15 ENSMUST00000175999.8 |
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| 3UTR-3UTR GCA 90 bp | TTACACTGTATGCGTTTCTCCGGTAACAAGGCTCACTTTCTTCCTGTGCAGCACAGCCTTCACCTGAGTTaGTGGGGGTATGCTGGAGCA | + |
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Preference number: 2 (lower is better) Translates to: LHCMRFSGNKAHFLPVQHSLHLS*WGYAGA Trigger: TGCTCCAGCATACCCCCAGCAACTCAGGTGAAGGCT...GTGCTGCACAGGAAGAAAGTGAGCCTTGTTACCGGAGAAACGCATACAGTGTAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000175999.8 |
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| 3UTR-3UTR GCA 90 bp | CTTTTATTTGCTCCATGGGGTTACAACAAGGGCCTCCTGCACGGTAAACCTGCACAGGCTGCAGCACACTaGAAGATGAACTGCAAAGGT | + |
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Preference number: 2 (lower is better) Translates to: LLFAPWGYNKGLLHGKPAQAAAH*KMNCKG Trigger: ACCTTTGCAGTTCATCTTGCAGTGTGCTGCAGCCTG...TGCAGGTTTACCGTGCAGGAGGCCCTTGTTGTAACCCCATGGAGCAAATAAAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037484.15 |
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| 3UTR-3UTR CCA 90 bp | TGCAAAGGTCCTGTTGGATATTTGAGATTCAAGCTGCCGTTGCCAGGACAGCCTCCAATGAAGATTGTATaGCTCTCCCCAGCTTCTTCG | + |
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Preference number: 2 (lower is better) Translates to: CKGPVGYLRFKLPLPGQPPMKIV*LSPASS Trigger: CGAAGAAGCTGGGGAGAGCCATACAATCTTCATTGG...AGGCTGTCCTGGCAACGGCAGCTTGAATCTCAAATATCCAACAGGACCTTTGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000175999.8 |
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| 3UTR-3UTR TCA 90 bp | ATGAACTGCAAAGGTCCTGTTGGATATTTGAGATTCAAGCTGCCGTTGCCAGGAAGAAGGGCCTCTGAGTaGGTCCATAAGGAGGATACA | + |
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Preference number: 2 (lower is better) Translates to: MNCKGPVGYLRFKLPLPGRRASE*VHKEDT Trigger: TGTATCCTCCTTATGGACTCACTCAGAGGCCCTTCT...TCCTGGCAACGGCAGCTTGAATCTCAAATATCCAACAGGACCTTTGCAGTTCAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175999.8 |
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| 3UTR-3UTR GCA 90 bp | AGAAAGCCCGTGTTCACAGATGAAAACTGTTCCTTAACTAGTTCTGTCATCCAGGATTCAAGCTGCCGTTaGCAGGACAGCCTTCACCTG | + |
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Preference number: 2 (lower is better) Translates to: RKPVFTDENCSLTSSVIQDSSCR*QDSLHL Trigger: CAGGTGAAGGCTGTCCTGGCAACGGCAGCTTGAATC...CTGGATGACAGAACTAGTTAAGGAACAGTTTTCATCTGTGAACACGGGCTTTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037484.15 ENSMUST00000175999.8 |
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| 3UTR-3UTR GCA 90 bp | ATGAACTGCAAAGGTCCTGTTGGATATTTGAGATTCAAGCTGCCGTTGCCAGGATCTGGGTTCCTGCTCTaGTCTACAGGCATCTGCATT | + |
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Preference number: 2 (lower is better) Translates to: MNCKGPVGYLRFKLPLPGSGFLL*STGICI Trigger: AATGCAGATGCCTGTAGAGCAGAGCAGGAACCCAGA...TCCTGGCAACGGCAGCTTGAATCTCAAATATCCAACAGGACCTTTGCAGTTCAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175999.8 |
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| 3UTR-3UTR CCA 90 bp | TGGAACTCACTTATGACATTTTTACAGGCTTTATCACCCCAGTCTCTGAGTAGTTGCTGTGTCTGTCACTaGGAAGGGGGAGCCTTCCAG | + |
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Preference number: 2 (lower is better) Translates to: WNSLMTFLQALSPQSLSSCCVCH*EGGAFQ Trigger: CTGGAAGGCTCCCCCTTCCCAGTGACAGACACAGCA...ACTACTCAGAGACTGGGGTGATAAAGCCTGTAAAAATGTCATAAGTGAGTTCCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000037484.15 ENSMUST00000164859.8 ENSMUST00000175999.8 |
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| 3UTR CAA 90 bp | CCGTCCCCTAAGGACGTCTCTGCTAAGGAGTCCTTCAGCAGCTTCTaGTCTTTACTCTGTGATTCCTGTAGCTTCAAAATTATGTTTCGG | + |
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Preference number: 2 (lower is better) Translates to: PSPKDVSAKESFSSF*SLLCDSCSFKIMFR Trigger: CCGAAACATAATTTTGAAGCTACAGGAATCACAGAGTAAAGACAAGAAGCTGCTGAAGGACTCCTTAGCAGAGACGTCCTTAGGGGACGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000175999.8 |
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| 3UTR-3UTR GCA 90 bp | GGTCGCCTCACTAGCACAAGTCAAGGTGCACTGTCTTTGATTGCTCTTAATGGTCAGCTTCTGGTAAACTaGTGGTATTGCCTGGAGAAA | + |
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Preference number: 2 (lower is better) Translates to: GRLTSTSQGALSLIALNGQLLVN*WYCLEK Trigger: TTTCTCCAGGCAATACCAGCAGTTTACCAGAAGCTG...ACCATTAAGAGCAATCAAAGACAGTGCACCTTGACTTGTGCTAGTGAGGCGACC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175999.8 |
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| 3UTR-3UTR CCA 90 bp | TTACACTGTATGCGTTTCTCCGGTAACAAGGCTCACTTTCTTCCTGTGCAGCACAAGCACCCATCTCACTaGCAGAAGAAACACAACTGT | + |
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Preference number: 2 (lower is better) Translates to: LHCMRFSGNKAHFLPVQHKHPSH*QKKHNC Trigger: ACAGTTGTGTTTCTTCTGCCAGTGAGATGGGTGCTT...GTGCTGCACAGGAAGAAAGTGAGCCTTGTTACCGGAGAAACGCATACAGTGTAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175999.8 |
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| 3UTR CAA 90 bp | ATGATGTACAGAACTGAAGCATTCATCCCGGAGGCCATTCTCACTTaGGGTTCTATCACAAATGTCCTGGCACGTAGATTCTCCGTTACT | + |
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Preference number: 2 (lower is better) Translates to: MMYRTEAFIPEAILT*GSITNVLARRFSVT Trigger: AGTAACGGAGAATCTACGTGCCAGGACATTTGTGATAGAACCCAAAGTGAGAATGGCCTCCGGGATGAATGCTTCAGTTCTGTACATCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175999.8 |
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| 3UTR-3UTR CCA 90 bp | CTGGAGCAGGGTCGCCTCACTAGCACAAGTCAAGGTGCACTGTCTTTGATTGCTCATGTTAAGTCCAATTaGGTTGCCTTTCAAAGTTTT | + |
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Preference number: 2 (lower is better) Translates to: LEQGRLTSTSQGALSLIAHVKSN*VAFQSF Trigger: AAAACTTTGAAAGGCAACCCAATTGGACTTAACATG...AGCAATCAAAGACAGTGCACCTTGACTTGTGCTAGTGAGGCGACCCTGCTCCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175999.8 |
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| 3UTR-3UTR GCA 90 bp | CACACTCCTTTGGAACTCACTTATGACATTTTTACAGGCTTTATCACCCCAGTCTCCCCCAAGAGTAAATaGTGTGTCTGTCACTGGGAA | + |
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Preference number: 2 (lower is better) Translates to: HTPLELTYDIFTGFITPVSPKSK*CVCHWE Trigger: TTCCCAGTGACAGACACAGCATTTACTCTTGGGGGA...GACTGGGGTGATAAAGCCTGTAAAAATGTCATAAGTGAGTTCCAAAGGAGTGTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000037484.15 ENSMUST00000164859.8 ENSMUST00000175999.8 |
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| 3UTR-3UTR GCA 90 bp | TGCAAAGGTCCTGTTGGATATTTGAGATTCAAGCTGCCGTTGCCAGGACAGCCTGAAAATGAGAGCTTCTaGTGCACTATGCAATTAAAG | + |
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Preference number: 2 (lower is better) Translates to: CKGPVGYLRFKLPLPGQPENESF*CTMQLK Trigger: CTTTAATTGCATAGTGCAGCAGAAGCTCTCATTTTC...AGGCTGTCCTGGCAACGGCAGCTTGAATCTCAAATATCCAACAGGACCTTTGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037484.15 |
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| 3UTR-3UTR GCA 90 bp | TTGTTGTATCGACAGATTAGTTGTCTCAGGATTTCTCCTCTCTCTCTGATTAAGCTGCTTCTGGGTTCCTaGTCTGCTCTACAGGCATCT | + |
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Preference number: 2 (lower is better) Translates to: LLYRQISCLRISPLSLIKLLLGS*SALQAS Trigger: AGATGCCTGTAGAGCAGAGCAGGAACCCAGAAGCAG...CTTAATCAGAGAGAGAGGAGAAATCCTGAGACAACTAATCTGTCGATACAACAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175999.8 |
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| 3UTR-3UTR CCA 90 bp | ACTAAATATATGAATTCGGTCAGCGTCTTCTTTCTTCAGTTTTTCAAGCACCAATGCTGTGTCTGTCACTaGGAAGGGGGAGCCTTCCAG | + |
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Preference number: 2 (lower is better) Translates to: TKYMNSVSVFFLQFFKHQCCVCH*EGGAFQ Trigger: CTGGAAGGCTCCCCCTTCCCAGTGACAGACACAGCA...TTGGTGCTTGAAAAACTGAAGAAAGAAGACGCTGACCGAATTCATATATTTAGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000175999.8 |
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| 3UTR-3UTR CCA 90 bp | GGTCGCCTCACTAGCACAAGTCAAGGTGCACTGTCTTTGATTGCTCTTAATGGTCTGCAAAGGTCCTGTTaGATATTTGAGATTCAAGCT | + |
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Preference number: 2 (lower is better) Translates to: GRLTSTSQGALSLIALNGLQRSC*IFEIQA Trigger: AGCTTGAATCTCAAATATCCAACAGGACCTTTGCAG...ACCATTAAGAGCAATCAAAGACAGTGCACCTTGACTTGTGCTAGTGAGGCGACC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037484.15 ENSMUST00000175999.8 |
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| 3UTR CAA 90 bp | ACAGCTAAGCAATGTTTTCTATTTAACATCTTCTTGATCACAGGCTaGGCAGCAGAGTTCTGTGAACAAGCACCCATCTCACTGGCAGAA | + |
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Preference number: 2 (lower is better) Translates to: TAKQCFLFNIFLITG*AAEFCEQAPISLAE Trigger: TTCTGCCAGTGAGATGGGTGCTTGTTCACAGAACTCTGCTGCCAAGCCTGTGATCAAGAAGATGTTAAATAGAAAACATTGCTTAGCTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000175999.8 |
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| 3UTR-3UTR GCA 90 bp | ATGAACTGCAAAGGTCCTGTTGGATATTTGAGATTCAAGCTGCCGTTGCCAGGAGTTTTTACTCTCCCATaGCGTTTTTGTTGTATCGAC | + |
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Preference number: 2 (lower is better) Translates to: MNCKGPVGYLRFKLPLPGVFTLP*RFCCID Trigger: GTCGATACAACAAAAACGGCATGGGAGAGTAAAAAC...TCCTGGCAACGGCAGCTTGAATCTCAAATATCCAACAGGACCTTTGCAGTTCAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000175999.8 |
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| 3UTR-3UTR CCA 90 bp | CTAAGGAGTCCTTCAGCAGCTTCTTGTCTTTACTCTGTGATTCCTGTAGCTTCACTATCACAAATGTCCTaGCACGTAGATTCTCCGTTA | + |
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Preference number: 2 (lower is better) Translates to: LRSPSAASCLYSVIPVASLSQMS*HVDSPL Trigger: TAACGGAGAATCTACGTGCCAGGACATTTGTGATAG...TGAAGCTACAGGAATCACAGAGTAAAGACAAGAAGCTGCTGAAGGACTCCTTAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175999.8 |
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| 3UTR CAA 90 bp | CCAGAACATAATGCTGTGCCTGCGGTGCTTTCACTCAGTTTCTTATaGTTGCTTAACATGTTAAGTCCAATTGGGTTGCCTTTCAAAGTT | + |
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Preference number: 2 (lower is better) Translates to: PEHNAVPAVLSLSFL*LLNMLSPIGLPFKV Trigger: AACTTTGAAAGGCAACCCAATTGGACTTAACATGTTAAGCAACAATAAGAAACTGAGTGAAAGCACCGCAGGCACAGCATTATGTTCTGG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175999.8 |
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| 3UTR-3UTR CCA 90 bp | AGAAAGCCCGTGTTCACAGATGAAAACTGTTCCTTAACTAGTTCTGTCATCCAGCTGCAAAGGTCCTGTTaGATATTTGAGATTCAAGCT | + |
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Preference number: 2 (lower is better) Translates to: RKPVFTDENCSLTSSVIQLQRSC*IFEIQA Trigger: AGCTTGAATCTCAAATATCCAACAGGACCTTTGCAG...CTGGATGACAGAACTAGTTAAGGAACAGTTTTCATCTGTGAACACGGGCTTTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037484.15 ENSMUST00000175999.8 |
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| 3UTR CAA 90 bp | TCACTCAGTTTCTTATTGTTGCTTAACATGTTAAGTCCAATTGGGTaGCCTTTCAAAGTTTTAAAGCCGTCAGTCTTGCTCCGCCTTACA | + |
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Preference number: 2 (lower is better) Translates to: SLSFLLLLNMLSPIG*PFKVLKPSVLLRLT Trigger: TGTAAGGCGGAGCAAGACTGACGGCTTTAAAACTTTGAAAGGCAACCCAATTGGACTTAACATGTTAAGCAACAATAAGAAACTGAGTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000175999.8 |
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| 3UTR-3UTR CCA 90 bp | AGAAAGCCCGTGTTCACAGATGAAAACTGTTCCTTAACTAGTTCTGTCATCCAGTTCTTTTCCACATTTTaGGCAATATTCACGCTGTTC | + |
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Preference number: 2 (lower is better) Translates to: RKPVFTDENCSLTSSVIQFFSTF*AIFTLF Trigger: GAACAGCGTGAATATTGCCCAAAATGTGGAAAAGAA...CTGGATGACAGAACTAGTTAAGGAACAGTTTTCATCTGTGAACACGGGCTTTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000175999.8 |
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| 3UTR CAA 90 bp | GAACATAATGCTGTGCCTGCGGTGCTTTCACTCAGTTTCTTATTGTaGCTTAACATGTTAAGTCCAATTGGGTTGCCTTTCAAAGTTTTA | + |
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Preference number: 2 (lower is better) Translates to: EHNAVPAVLSLSFLL*LNMLSPIGLPFKVL Trigger: TAAAACTTTGAAAGGCAACCCAATTGGACTTAACATGTTAAGCAACAATAAGAAACTGAGTGAAAGCACCGCAGGCACAGCATTATGTTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000175999.8 |
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| 3UTR-3UTR TCA 90 bp | ACTAAATATATGAATTCGGTCAGCGTCTTCTTTCTTCAGTTTTTCAAGCACCAATTGCTTTTCGTGGTATaGCAATGGTATTTAACTCAG | + |
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Preference number: 2 (lower is better) Translates to: TKYMNSVSVFFLQFFKHQLLFVV*QWYLTQ Trigger: CTGAGTTAAATACCATTGTCATACCACGAAAAGCAA...TTGGTGCTTGAAAAACTGAAGAAAGAAGACGCTGACCGAATTCATATATTTAGT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000175999.8 |
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| 3UTR CCA 72 bp | TCCAGGCCCAGCCTCCTCGTCACTCTGAGCCACCGCTaGCGCTGGCGTACTGCTCTGCTCCGTCCCCTAAGG | + |
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Preference number: 3 (lower is better) Translates to: SRPSLLVTLSHR*RWRTALLRPLR Trigger: CCTTAGGGGACGGAGCAGAGCAGTACGCCAGCGCCAGCGGTGGCTCAGAGTGACGAGGAGGCTGGGCCTGGA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000175999.8 |
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| 3UTR CCA 72 bp | ACAGTCTCCCCCAAGAGTAAATGCTGTGTCTGTCACTaGGAAGGGGGAGCCTTCCAGGCCCAGCCTCCTCGT | + |
|
Preference number: 3 (lower is better) Translates to: TVSPKSKCCVCH*EGGAFQAQPPR Trigger: ACGAGGAGGCTGGGCCTGGAAGGCTCCCCCTTCCCAGTGACAGACACAGCATTTACTCTTGGGGGAGACTGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000175999.8 |
||
| 3UTR TCA 72 bp | ATTGCTCTGAGCCGCTGTTCTGATGCCTGGCGTCTGTaGGTGAGCATGATGGAAGCGCCTCCCATGAACCAC | + |
|
Preference number: 3 (lower is better) Translates to: IALSRCSDAWRL*VSMMEAPPMNH Trigger: GTGGTTCATGGGAGGCGCTTCCATCATGCTCACTCACAGACGCCAGGCATCAGAACAGCGGCTCAGAGCAAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175999.8 |
||
| 3UTR GCA 72 bp | GCACTTCAGCTCTTTACAGTCTCCCCCAAGAGTAAATaGTGTGTCTGTCACTGGGAAGGGGGAGCCTTCCAG | + |
|
Preference number: 3 (lower is better) Translates to: ALQLFTVSPKSK*CVCHWEGGAFQ Trigger: CTGGAAGGCTCCCCCTTCCCAGTGACAGACACAGCATTTACTCTTGGGGGAGACTGTAAAGAGCTGAAGTGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000037484.15 ENSMUST00000164859.8 ENSMUST00000175999.8 |
||
| 3UTR-3UTR CAA 90 bp | CTAAGGAGTCCTTCAGCAGCTTCTTGTCTTTACTCTGTGATTCCTGTAGCTTCACAGCCTTCACCTGAGTaGCTGGGGGTATGCTGGAGC | + |
|
Preference number: 3 (lower is better) Translates to: LRSPSAASCLYSVIPVASQPSPE*LGVCWS Trigger: GCTCCAGCATACCCCCAGCAACTCAGGTGAAGGCTG...TGAAGCTACAGGAATCACAGAGTAAAGACAAGAAGCTGCTGAAGGACTCCTTAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000175999.8 |
||
| 3UTR TCA 72 bp | TATCATCCGGGTCATCCTGATCCTCTGAGAAGTCAATaGGCTCATCTTCAAGCAGCTTCCCACCGTCTGCTG | + |
|
Preference number: 3 (lower is better) Translates to: YHPGHPDPLRSQ*AHLQAASHRLL Trigger: CAGCAGACGGTGGGAAGCTGCTTGAAGATGAGCTCATTGACTTCTCAGAGGATCAGGATGACCCGGATGATA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175999.8 |
||
| 3UTR GCA 72 bp | TTTAACTCAGGCTCTGCTGGACTGCTTCTGGGTTCCTaGTCTGCTCTACAGGCATCTGCATTTAGTGCAGCT | + |
|
Preference number: 3 (lower is better) Translates to: FNSGSAGLLLGS*SALQASAFSAA Trigger: AGCTGCACTAAATGCAGATGCCTGTAGAGCAGAGCAGGAACCCAGAAGCAGTCCAGCAGAGCCTGAGTTAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175999.8 |
||
| 3UTR CCA 72 bp | TGGCAGCAGAGTTCTGTGAACAAGCACCCATCTCACTaGCAGAAGAAACACAACTGTCCTCTGCACTTGGAG | + |
|
Preference number: 3 (lower is better) Translates to: WQQSSVNKHPSH*QKKHNCPLHLE Trigger: CTCCAAGTGCAGAGGACAGTTGTGTTTCTTCTGCCAGTGAGATGGGTGCTTGTTCACAGAACTCTGCTGCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175999.8 |
||
| 3UTR-3UTR CAA 90 bp | AGAAAGCCCGTGTTCACAGATGAAAACTGTTCCTTAACTAGTTCTGTCATCCAGCAGCCTTCACCTGAGTaGCTGGGGGTATGCTGGAGC | + |
|
Preference number: 3 (lower is better) Translates to: RKPVFTDENCSLTSSVIQQPSPE*LGVCWS Trigger: GCTCCAGCATACCCCCAGCAACTCAGGTGAAGGCTG...CTGGATGACAGAACTAGTTAAGGAACAGTTTTCATCTGTGAACACGGGCTTTCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000037484.15 ENSMUST00000175999.8 |
||
| 3UTR TCA 72 bp | GTCATCACTGCTATCATCCGGGTCATCCTGATCCTCTaGGAAGTCAATGAGCTCATCTTCAAGCAGCTTCCC | + |
|
Preference number: 3 (lower is better) Translates to: VITAIIRVILIL*EVNELIFKQLP Trigger: GGGAAGCTGCTTGAAGATGAGCTCATTGACTTCTCAGAGGATCAGGATGACCCGGATGATAGCAGTGATGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175999.8 |
||
| 3UTR-3UTR CAA 90 bp | GCAGCAGAGTTCTGTGAACAAGCACCCATCTCACTGGCAGAAGAAACACAACTGGGTCCTGTTGGATATTaGAGATTCAAGCTGCCGTTG | + |
|
Preference number: 3 (lower is better) Translates to: AAEFCEQAPISLAEETQLGPVGY*RFKLPL Trigger: CAACGGCAGCTTGAATCTCAAATATCCAACAGGACC...CAGTTGTGTTTCTTCTGCCAGTGAGATGGGTGCTTGTTCACAGAACTCTGCTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175999.8 |
||
| 3UTR TCA 72 bp | CATCTTCTTGATCACAGGCTTGGCAGCAGAGTTCTGTaGACAAGCACCCATCTCACTGGCAGAAGAAACACA | + |
|
Preference number: 3 (lower is better) Translates to: HLLDHRLGSRVL*TSTHLTGRRNT Trigger: TGTGTTTCTTCTGCCAGTGAGATGGGTGCTTGTTCACAGAACTCTGCTGCCAAGCCTGTGATCAAGAAGATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175999.8 |
||
| 3UTR GCA 72 bp | GCCTCCCATGAACCACAGTTCCAGAACATAATGCTGTaGCTGCGGTGCTTTCACTCAGTTTCTTATTGTTGC | + |
|
Preference number: 3 (lower is better) Translates to: ASHEPQFQNIML*LRCFHSVSYCC Trigger: GCAACAATAAGAAACTGAGTGAAAGCACCGCAGGCACAGCATTATGTTCTGGAACTGTGGTTCATGGGAGGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175999.8 |
||
| 3UTR CCA 72 bp | TGCAGCACACTGCAAGATGAACTGCAAAGGTCCTGTTaGATATTTGAGATTCAAGCTGCCGTTGCCAGGACA | + |
|
Preference number: 3 (lower is better) Translates to: CSTLQDELQRSC*IFEIQAAVART Trigger: TGTCCTGGCAACGGCAGCTTGAATCTCAAATATCCAACAGGACCTTTGCAGTTCATCTTGCAGTGTGCTGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037484.15 ENSMUST00000175999.8 |
||
| 3UTR CCA 72 bp | CAATGGTATTTAACTCAGGCTCTGCTGGACTGCTTCTaGGTTCCTGCTCTGCTCTACAGGCATCTGCATTTA | + |
|
Preference number: 3 (lower is better) Translates to: QWYLTQALLDCF*VPALLYRHLHL Trigger: TAAATGCAGATGCCTGTAGAGCAGAGCAGGAACCCAGAAGCAGTCCAGCAGAGCCTGAGTTAAATACCATTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175999.8 |
||
| 3UTR-3UTR CAA 90 bp | GGTCGCCTCACTAGCACAAGTCAAGGTGCACTGTCTTTGATTGCTCTTAATGGTGGTCCTGTTGGATATTaGAGATTCAAGCTGCCGTTG | + |
|
Preference number: 3 (lower is better) Translates to: GRLTSTSQGALSLIALNGGPVGY*RFKLPL Trigger: CAACGGCAGCTTGAATCTCAAATATCCAACAGGACC...ACCATTAAGAGCAATCAAAGACAGTGCACCTTGACTTGTGCTAGTGAGGCGACC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037484.15 ENSMUST00000175999.8 |
||
| 3UTR-3UTR CAA 90 bp | GGTCGCCTCACTAGCACAAGTCAAGGTGCACTGTCTTTGATTGCTCTTAATGGTGGTAAACTGCTGGTATaGCCTGGAGAAACACTACTG | + |
|
Preference number: 3 (lower is better) Translates to: GRLTSTSQGALSLIALNGGKLLV*PGETLL Trigger: CAGTAGTGTTTCTCCAGGCAATACCAGCAGTTTACC...ACCATTAAGAGCAATCAAAGACAGTGCACCTTGACTTGTGCTAGTGAGGCGACC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175999.8 |
||
| 3UTR GCA 72 bp | TCTGTCATCCAGGCTGCAGCACACTGCAAGATGAACTaGAAAGGTCCTGTTGGATATTTGAGATTCAAGCTG | + |
|
Preference number: 3 (lower is better) Translates to: SVIQAAAHCKMN*KGPVGYLRFKL Trigger: CAGCTTGAATCTCAAATATCCAACAGGACCTTTGCAGTTCATCTTGCAGTGTGCTGCAGCCTGGATGACAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037484.15 ENSMUST00000175999.8 |
||
| 3UTR TCA 72 bp | TACCAAGCTGGTCCTTCATTCTTGCTTTTCGTGGTATaGCAATGGTATTTAACTCAGGCTCTGCTGGACTGC | + |
|
Preference number: 3 (lower is better) Translates to: YQAGPSFLLFVV*QWYLTQALLDC Trigger: GCAGTCCAGCAGAGCCTGAGTTAAATACCATTGTCATACCACGAAAAGCAAGAATGAAGGACCAGCTTGGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000175999.8 |
||
| 3UTR TCA 72 bp | TCCCACCGTCTGCTGACTGATCACCGTAGTTTAGTCTaGTTTTGCTTAAGGCATCTGGATGATGTACAGAAC | + |
|
Preference number: 3 (lower is better) Translates to: SHRLLTDHRSLV*FCLRHLDDVQN Trigger: GTTCTGTACATCATCCAGATGCCTTAAGCAAAATCAGACTAAACTACGGTGATCAGTCAGCAGACGGTGGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000175999.8 |
||
| 3UTR GCA 72 bp | TCCTTAACTAGTTCTGTCATCCAGGCTGCAGCACACTaGAAGATGAACTGCAAAGGTCCTGTTGGATATTTG | + |
|
Preference number: 3 (lower is better) Translates to: SLTSSVIQAAAH*KMNCKGPVGYL Trigger: CAAATATCCAACAGGACCTTTGCAGTTCATCTTGCAGTGTGCTGCAGCCTGGATGACAGAACTAGTTAAGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037484.15 ENSMUST00000175999.8 |
||
| 3UTR CCA 72 bp | TTTGGGCAATATTCACGCTGTTCAGAAACCTCTAAATaGGTCAAACACTTCTTTGAGGCAGGGGACAGAGGA | + |
|
Preference number: 3 (lower is better) Translates to: FGQYSRCSETSK*VKHFFEAGDRG Trigger: TCCTCTGTCCCCTGCCTCAAAGAAGTGTTTGACCCATTTAGAGGTTTCTGAACAGCGTGAATATTGCCCAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000175999.8 |
||
| 3UTR-3UTR CAA 90 bp | GGTCGCCTCACTAGCACAAGTCAAGGTGCACTGTCTTTGATTGCTCTTAATGGTATTCAAAGTTACGGCTaGTCGGCAATTTCTTTGCAA | + |
|
Preference number: 3 (lower is better) Translates to: GRLTSTSQGALSLIALNGIQSYG*SAISLQ Trigger: TTGCAAAGAAATTGCCGACAAGCCGTAACTTTGAAT...ACCATTAAGAGCAATCAAAGACAGTGCACCTTGACTTGTGCTAGTGAGGCGACC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175999.8 |
||
| 3UTR-3UTR CAA 90 bp | CTAAGGAGTCCTTCAGCAGCTTCTTGTCTTTACTCTGTGATTCCTGTAGCTTCAACTGAAGTTGTTCTGTaGTGGGACTTTTGGGTTGGA | + |
|
Preference number: 3 (lower is better) Translates to: LRSPSAASCLYSVIPVASTEVVL*WDFWVG Trigger: TCCAACCCAAAAGTCCCACAACAGAACAACTTCAGT...TGAAGCTACAGGAATCACAGAGTAAAGACAAGAAGCTGCTGAAGGACTCCTTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000175999.8 |
||
| 3UTR-3UTR CAA 90 bp | ATGAACTGCAAAGGTCCTGTTGGATATTTGAGATTCAAGCTGCCGTTGCCAGGAGCAACAAGTCTGCTATaGGCTTCGTCAAAAAGAATT | + |
|
Preference number: 3 (lower is better) Translates to: MNCKGPVGYLRFKLPLPGATSLL*ASSKRI Trigger: AATTCTTTTTGACGAAGCCAATAGCAGACTTGTTGC...TCCTGGCAACGGCAGCTTGAATCTCAAATATCCAACAGGACCTTTGCAGTTCAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000175999.8 |
||
| 3UTR-3UTR CAA 90 bp | CTAAGGAGTCCTTCAGCAGCTTCTTGTCTTTACTCTGTGATTCCTGTAGCTTCACTATTTAACATCTTCTaGATCACAGGCTTGGCAGCA | + |
|
Preference number: 3 (lower is better) Translates to: LRSPSAASCLYSVIPVASLFNIF*ITGLAA Trigger: TGCTGCCAAGCCTGTGATCAAGAAGATGTTAAATAG...TGAAGCTACAGGAATCACAGAGTAAAGACAAGAAGCTGCTGAAGGACTCCTTAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175999.8 |
||
| 3UTR TCA 72 bp | TCAGTTTTCTTCATTATATGGTCTCCACCTTGGCCATaGCTTAGCATTACAGGGCTGTTTTCAGCTTTGTGG | + |
|
Preference number: 3 (lower is better) Translates to: SVFFIIWSPPWP*LSITGLFSALW Trigger: CCACAAAGCTGAAAACAGCCCTGTAATGCTAAGTCATGGCCAAGGTGGAGACCATATAATGAAGAAAACTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000175999.8 |
||
| 3UTR GCA 72 bp | TCCAAACTTTATCTTCTTTACTCATCTGTAGCTGCATaGTCAGCTTCTGGTAAACTGCTGGTATTGCCTGGA | + |
|
Preference number: 3 (lower is better) Translates to: SKLYLLYSSVAA*SASGKLLVLPG Trigger: TCCAGGCAATACCAGCAGTTTACCAGAAGCTGAGCATGCAGCTACAGATGAGTAAAGAAGATAAAGTTTGGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175999.8 |
||
| 3UTR CCA 72 bp | CGACGTTTTAAAGGTGTGCTGATGGAATTACCAAGCTaGTCCTTCATTCTTGCTTTTCGTGGTATGACAATG | + |
|
Preference number: 3 (lower is better) Translates to: RRFKGVLMELPS*SFILAFRGMTM Trigger: CATTGTCATACCACGAAAAGCAAGAATGAAGGACCAGCTTGGTAATTCCATCAGCACACCTTTAAAACGTCG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000175999.8 |
||
| 3UTR GCA 72 bp | TCTCAACTGAAAGAGGAAACTGAAAATGAGAGCTTCTaGTGCACTATGCAATTAAAGAGAACACTTCGCAGG | + |
|
Preference number: 3 (lower is better) Translates to: SQLKEETENESF*CTMQLKRTLRR Trigger: CCTGCGAAGTGTTCTCTTTAATTGCATAGTGCAGCAGAAGCTCTCATTTTCAGTTTCCTCTTTCAGTTGAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037484.15 |
||
| 3UTR GCA 72 bp | ATATCTACATGCCGTGTCCACGTTTTTACTCTCCCATaGCGTTTTTGTTGTATCGACAGATTAGTTGTCTCA | + |
|
Preference number: 3 (lower is better) Translates to: ISTCRVHVFTLP*RFCCIDRLVVS Trigger: TGAGACAACTAATCTGTCGATACAACAAAAACGGCATGGGAGAGTAAAAACGTGGACACGGCATGTAGATAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000175999.8 |
||
| 3UTR TCA 72 bp | GTCGCCTCACTAGCACAAGTCAAGGTGCACTGTCTTTaGTTGCTCTTAATGGTGTTTAAGTATTTGTGTAAA | + |
|
Preference number: 3 (lower is better) Translates to: VASLAQVKVHCL*LLLMVFKYLCK Trigger: TTTACACAAATACTTAAACACCATTAAGAGCAATCAAAGACAGTGCACCTTGACTTGTGCTAGTGAGGCGAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037484.15 ENSMUST00000175999.8 |
||
| 3UTR GCA 72 bp | CAACTGAAAGAGGAAACTGAAAATGAGAGCTTCTGCTaGACTATGCAATTAAAGAGAACACTTCGCAGGTTA | + |
|
Preference number: 3 (lower is better) Translates to: QLKEETENESFC*TMQLKRTLRRL Trigger: TAACCTGCGAAGTGTTCTCTTTAATTGCATAGTGCAGCAGAAGCTCTCATTTTCAGTTTCCTCTTTCAGTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037484.15 |
||
| 3UTR GCA 72 bp | TGCTCTCTTCATAGCTTCTTGTACAGGCAACAAGTCTaGTATTGGCTTCGTCAAAAAGAATTTTTGCAAAAA | + |
|
Preference number: 3 (lower is better) Translates to: CSLHSFLYRQQV*YWLRQKEFLQK Trigger: TTTTTGCAAAAATTCTTTTTGACGAAGCCAATAGCAGACTTGTTGCCTGTACAAGAAGCTATGAAGAGAGCA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000175999.8 |
||
| 3UTR TCA 72 bp | TTGTCTGTATGTAATTATGTCTGCTATCATCACAGGTaGCCAAAATATCAATTGGAATCTTATCCACACTGT | + |
|
Preference number: 3 (lower is better) Translates to: LSVCNYVCYHHR*PKYQLESYPHC Trigger: ACAGTGTGGATAAGATTCCAATTGATATTTTGGTCACCTGTGATGATAGCAGACATAATTACATACAGACAA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000175999.8 |
||
| CDS-3UTR GCA 90 bp | CTGGAGCAGGGTCGCCTCACTAGCACAAGTCAAGGTGCACTGTCTTTGATTGCTAAAGAGCCCCAGCGCTaGCACCGCTCTTGCCCGCCG | + |
|
Preference number: 4 (lower is better) Translates to: LEQGRLTSTSQGALSLIAKEPQR*HRSCPP Trigger: CGGCGGGCAAGAGCGGTGGCAGCGCTGGGGCTCTTT...AGCAATCAAAGACAGTGCACCTTGACTTGTGCTAGTGAGGCGACCCTGCTCCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037484.15 ENSMUST00000175999.8 |
||
| 3UTR CAA 72 bp | TTCAAGCTGCCGTTGCCAGGACAGCCTTCACCTGAGTaGCTGGGGGTATGCTGGAGCAGGGTCGCCTCACTA | + |
|
Preference number: 4 (lower is better) Translates to: FKLPLPGQPSPE*LGVCWSRVASL Trigger: TAGTGAGGCGACCCTGCTCCAGCATACCCCCAGCAACTCAGGTGAAGGCTGTCCTGGCAACGGCAGCTTGAA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000037484.15 ENSMUST00000175999.8 |
||
| CDS-3UTR TCA 90 bp | CCCAAGAGTAAATGCTGTGTCTGTCACTGGGAAGGGGGAGCCTTCCAGGCCCAGGGGTATTCTTTCCTCTaGGCCGCTGTTCTGATGCCT | + |
|
Preference number: 4 (lower is better) Translates to: PKSKCCVCHWEGGAFQAQGYSFL*AAVLMP Trigger: AGGCATCAGAACAGCGGCTCAGAGGAAAGAATACCC...CTGGGCCTGGAAGGCTCCCCCTTCCCAGTGACAGACACAGCATTTACTCTTGGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000037484.15 |
||
| CDS-3UTR TCA 90 bp | GTAAATGCTGTGTCTGTCACTGGGAAGGGGGAGCCTTCCAGGCCCAGCCTCCTCGATGATGTACAGAACTaGAGCATTCATCCCGGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: VNAVSVTGKGEPSRPSLLDDVQN*SIHPGG Trigger: GCCTCCGGGATGAATGCTTCAGTTCTGTACATCATC...GAGGAGGCTGGGCCTGGAAGGCTCCCCCTTCCCAGTGACAGACACAGCATTTAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000037484.15 ENSMUST00000164859.8 |
||
| CDS-3UTR GCA 90 bp | CAGGCTTTATCACCCCAGTCTCTGAGTAGTGAGCACTTCAGCTCTTTACAGTCTAAAGAGCCCCAGCGCTaGCACCGCTCTTGCCCGCCG | + |
|
Preference number: 4 (lower is better) Translates to: QALSPQSLSSEHFSSLQSKEPQR*HRSCPP Trigger: CGGCGGGCAAGAGCGGTGGCAGCGCTGGGGCTCTTT...AGACTGTAAAGAGCTGAAGTGCTCACTACTCAGAGACTGGGGTGATAAAGCCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037484.15 ENSMUST00000175999.8 |
||
| CDS-3UTR GCA 90 bp | CCCAAGAGTAAATGCTGTGTCTGTCACTGGGAAGGGGGAGCCTTCCAGGCCCAGCTGCTTCTGGGTTCCTaGTCTGCTCTACAGGCATCT | + |
|
Preference number: 4 (lower is better) Translates to: PKSKCCVCHWEGGAFQAQLLLGS*SALQAS Trigger: AGATGCCTGTAGAGCAGAGCAGGAACCCAGAAGCAG...CTGGGCCTGGAAGGCTCCCCCTTCCCAGTGACAGACACAGCATTTACTCTTGGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000037484.15 ENSMUST00000164859.8 |
||
| CDS-3UTR TCA 90 bp | GTCTCCCCCAAGAGTAAATGCTGTGTCTGTCACTGGGAAGGGGGAGCCTTCCAGGGCAGCAGAGTTCTGTaGACAAGCACCCATCTCACT | + |
|
Preference number: 4 (lower is better) Translates to: VSPKSKCCVCHWEGGAFQGSRVL*TSTHLT Trigger: AGTGAGATGGGTGCTTGTTCACAGAACTCTGCTGCC...CTGGAAGGCTCCCCCTTCCCAGTGACAGACACAGCATTTACTCTTGGGGGAGAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000037484.15 ENSMUST00000164859.8 |
||
| CDS-3UTR TCA 90 bp | GTCTCCCCCAAGAGTAAATGCTGTGTCTGTCACTGGGAAGGGGGAGCCTTCCAGAGAAGGGCCTCTGAGTaGGTCCATAAGGAGGATACA | + |
|
Preference number: 4 (lower is better) Translates to: VSPKSKCCVCHWEGGAFQRRASE*VHKEDT Trigger: TGTATCCTCCTTATGGACTCACTCAGAGGCCCTTCT...CTGGAAGGCTCCCCCTTCCCAGTGACAGACACAGCATTTACTCTTGGGGGAGAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000037484.15 ENSMUST00000164859.8 |
||
| CDS-3UTR GCA 90 bp | TCTCCCCCAAGAGTAAATGCTGTGTCTGTCACTGGGAAGGGGGAGCCTTCCAGGTCTGGGTTCCTGCTCTaGTCTACAGGCATCTGCATT | + |
|
Preference number: 4 (lower is better) Translates to: SPPRVNAVSVTGKGEPSRSGFLL*STGICI Trigger: AATGCAGATGCCTGTAGAGCAGAGCAGGAACCCAGA...CCTGGAAGGCTCCCCCTTCCCAGTGACAGACACAGCATTTACTCTTGGGGGAGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000037484.15 ENSMUST00000164859.8 |
||
| CDS-3UTR TCA 90 bp | CTGGAGCAGGGTCGCCTCACTAGCACAAGTCAAGGTGCACTGTCTTTGATTGCTTGGAAGCGCCTCCCATaGACCACAGTTCCAGAACAT | + |
|
Preference number: 4 (lower is better) Translates to: LEQGRLTSTSQGALSLIAWKRLP*TTVPEH Trigger: ATGTTCTGGAACTGTGGTTCATGGGAGGCGCTTCCA...AGCAATCAAAGACAGTGCACCTTGACTTGTGCTAGTGAGGCGACCCTGCTCCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037484.15 |
||
| CDS-3UTR TCA 90 bp | TTTACAGTCTCCCCCAAGAGTAAATGCTGTGTCTGTCACTGGGAAGGGGGAGCCGGTCAAACACTTCTTTaGGGCAGGGGACAGAGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: FTVSPKSKCCVCHWEGGAGQTLL*GRGQRR Trigger: TCTCCTCTGTCCCCTGCCTCAAAGAAGTGTTTGACC...GGCTCCCCCTTCCCAGTGACAGACACAGCATTTACTCTTGGGGGAGACTGTAAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000037484.15 ENSMUST00000164859.8 |
||
| CDS-3UTR TCA 90 bp | GTAAATGCTGTGTCTGTCACTGGGAAGGGGGAGCCTTCCAGGCCCAGCCTCCTCTATTTAACATCTTCTTaGTCACAGGCTTGGCAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: VNAVSVTGKGEPSRPSLLYLTSS*SQAWQQ Trigger: CTGCTGCCAAGCCTGTGATCAAGAAGATGTTAAATA...GAGGAGGCTGGGCCTGGAAGGCTCCCCCTTCCCAGTGACAGACACAGCATTTAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000037484.15 ENSMUST00000164859.8 |
||
| CDS-3UTR TCA 90 bp | GTCTCCCCCAAGAGTAAATGCTGTGTCTGTCACTGGGAAGGGGGAGCCTTCCAGCCTCTGAGAAGTCAATaGGCTCATCTTCAAGCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: VSPKSKCCVCHWEGGAFQPLRSQ*AHLQAA Trigger: AGCTGCTTGAAGATGAGCTCATTGACTTCTCAGAGG...CTGGAAGGCTCCCCCTTCCCAGTGACAGACACAGCATTTACTCTTGGGGGAGAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000037484.15 ENSMUST00000164859.8 |
||
| CDS-3UTR GCA 90 bp | CCCAAGAGTAAATGCTGTGTCTGTCACTGGGAAGGGGGAGCCTTCCAGGCCCAGTGCCCCATCTTTGTCTaGATCTCCTTCACTTTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: PKSKCCVCHWEGGAFQAQCPIFV*ISFTFF Trigger: GAAGAAAGTGAAGGAGATGCAGACAAAGATGGGGCA...CTGGGCCTGGAAGGCTCCCCCTTCCCAGTGACAGACACAGCATTTACTCTTGGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000037484.15 |
||
| CDS-3UTR CCA 90 bp | GGGGTATGCTGGAGCAGGGTCGCCTCACTAGCACAAGTCAAGGTGCACTGTCTTCAGTGCCGCTTCTGCTaGACTTTCCTCTTAATCTCA | + |
|
Preference number: 4 (lower is better) Translates to: GVCWSRVASLAQVKVHCLQCRFC*TFLLIS Trigger: TGAGATTAAGAGGAAAGTCCAGCAGAAGCGGCACTG...AAGACAGTGCACCTTGACTTGTGCTAGTGAGGCGACCCTGCTCCAGCATACCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037484.15 |
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| CDS-3UTR CCA 90 bp | GTAAATGCTGTGTCTGTCACTGGGAAGGGGGAGCCTTCCAGGCCCAGCCTCCTCCTATCACAAATGTCCTaGCACGTAGATTCTCCGTTA | + |
|
Preference number: 4 (lower is better) Translates to: VNAVSVTGKGEPSRPSLLLSQMS*HVDSPL Trigger: TAACGGAGAATCTACGTGCCAGGACATTTGTGATAG...GAGGAGGCTGGGCCTGGAAGGCTCCCCCTTCCCAGTGACAGACACAGCATTTAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000037484.15 ENSMUST00000164859.8 |
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| CDS-3UTR TCA 90 bp | CCCAAGAGTAAATGCTGTGTCTGTCACTGGGAAGGGGGAGCCTTCCAGGCCCAGAATTTTGACAACATTTaGACGAGAAGGGCCTCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: PKSKCCVCHWEGGAFQAQNFDNI*TRRASE Trigger: CTCAGAGGCCCTTCTCGTTCAAATGTTGTCAAAATT...CTGGGCCTGGAAGGCTCCCCCTTCCCAGTGACAGACACAGCATTTACTCTTGGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000037484.15 ENSMUST00000164859.8 |
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| CDS-3UTR GCA 90 bp | GTCTCCCCCAAGAGTAAATGCTGTGTCTGTCACTGGGAAGGGGGAGCCTTCCAGCAGCTTCTGGTAAACTaGTGGTATTGCCTGGAGAAA | + |
|
Preference number: 4 (lower is better) Translates to: VSPKSKCCVCHWEGGAFQQLLVN*WYCLEK Trigger: TTTCTCCAGGCAATACCAGCAGTTTACCAGAAGCTG...CTGGAAGGCTCCCCCTTCCCAGTGACAGACACAGCATTTACTCTTGGGGGAGAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000037484.15 ENSMUST00000164859.8 |
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| CDS-3UTR CCA 90 bp | GTCTCCCCCAAGAGTAAATGCTGTGTCTGTCACTGGGAAGGGGGAGCCTTCCAGAAGCACCCATCTCACTaGCAGAAGAAACACAACTGT | + |
|
Preference number: 4 (lower is better) Translates to: VSPKSKCCVCHWEGGAFQKHPSH*QKKHNC Trigger: ACAGTTGTGTTTCTTCTGCCAGTGAGATGGGTGCTT...CTGGAAGGCTCCCCCTTCCCAGTGACAGACACAGCATTTACTCTTGGGGGAGAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000037484.15 ENSMUST00000164859.8 |
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| CDS-3UTR CCA 90 bp | CCCAAGAGTAAATGCTGTGTCTGTCACTGGGAAGGGGGAGCCTTCCAGGCCCAGAGGCCATTCTCACTTTaGGTTCTATCACAAATGTCC | + |
|
Preference number: 4 (lower is better) Translates to: PKSKCCVCHWEGGAFQAQRPFSL*VLSQMS Trigger: GGACATTTGTGATAGAACCCAAAGTGAGAATGGCCT...CTGGGCCTGGAAGGCTCCCCCTTCCCAGTGACAGACACAGCATTTACTCTTGGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000037484.15 ENSMUST00000164859.8 |
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| CDS-3UTR TCA 90 bp | TCTCCCCCAAGAGTAAATGCTGTGTCTGTCACTGGGAAGGGGGAGCCTTCCAGGCACCGTAGTTTAGTCTaGTTTTGCTTAAGGCATCTG | + |
|
Preference number: 4 (lower is better) Translates to: SPPRVNAVSVTGKGEPSRHRSLV*FCLRHL Trigger: CAGATGCCTTAAGCAAAATCAGACTAAACTACGGTG...CCTGGAAGGCTCCCCCTTCCCAGTGACAGACACAGCATTTACTCTTGGGGGAGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000037484.15 ENSMUST00000164859.8 |
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| CDS-3UTR GCA 90 bp | CTTTTATTTGCTCCATGGGGTTACAACAAGGGCCTCCTGCACGGTAAACCTGCACTGCTTCTGGGTTCCTaGTCTGCTCTACAGGCATCT | + |
|
Preference number: 4 (lower is better) Translates to: LLFAPWGYNKGLLHGKPALLLGS*SALQAS Trigger: AGATGCCTGTAGAGCAGAGCAGGAACCCAGAAGCAG...TGCAGGTTTACCGTGCAGGAGGCCCTTGTTGTAACCCCATGGAGCAAATAAAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037484.15 |
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| CDS-3UTR GCA 90 bp | GTCTCCCCCAAGAGTAAATGCTGTGTCTGTCACTGGGAAGGGGGAGCCTTCCAGCCTTCACTTAGACAGTaGAGGTCCTCATTAGTAACA | + |
|
Preference number: 4 (lower is better) Translates to: VSPKSKCCVCHWEGGAFQPSLRQ*RSSLVT Trigger: TGTTACTAATGAGGACCTGCACTGTCTAAGTGAAGG...CTGGAAGGCTCCCCCTTCCCAGTGACAGACACAGCATTTACTCTTGGGGGAGAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000037484.15 ENSMUST00000164859.8 |
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| CDS-3UTR GCA 90 bp | CCCAAGAGTAAATGCTGTGTCTGTCACTGGGAAGGGGGAGCCTTCCAGGCCCAGGTTTTTACTCTCCCATaGCGTTTTTGTTGTATCGAC | + |
|
Preference number: 4 (lower is better) Translates to: PKSKCCVCHWEGGAFQAQVFTLP*RFCCID Trigger: GTCGATACAACAAAAACGGCATGGGAGAGTAAAAAC...CTGGGCCTGGAAGGCTCCCCCTTCCCAGTGACAGACACAGCATTTACTCTTGGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 2 transcripts: ENSMUST00000037484.15 ENSMUST00000164859.8 |
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| 3UTR CAA 72 bp | AAAGGTCCTGTTGGATATTTGAGATTCAAGCTGCCGTaGCCAGGACAGCCTTCACCTGAGTTGCTGGGGGTA | + |
|
Preference number: 4 (lower is better) Translates to: KGPVGYLRFKLP*PGQPSPELLGV Trigger: TACCCCCAGCAACTCAGGTGAAGGCTGTCCTGGCAACGGCAGCTTGAATCTCAAATATCCAACAGGACCTTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000037484.15 ENSMUST00000175999.8 |
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| CDS-3UTR TCA 90 bp | CTGGAGCAGGGTCGCCTCACTAGCACAAGTCAAGGTGCACTGTCTTTGATTGCTCCTCATCTTCTACACTaGGTAGATTTGCCCCATCTT | + |
|
Preference number: 4 (lower is better) Translates to: LEQGRLTSTSQGALSLIAPHLLH*VDLPHL Trigger: AAGATGGGGCAAATCTACTCAGTGTAGAAGATGAGG...AGCAATCAAAGACAGTGCACCTTGACTTGTGCTAGTGAGGCGACCCTGCTCCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037484.15 |
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| CDS-3UTR TCA 90 bp | CAGGCTTTATCACCCCAGTCTCTGAGTAGTGAGCACTTCAGCTCTTTACAGTCTGGTCAAACACTTCTTTaGGGCAGGGGACAGAGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: QALSPQSLSSEHFSSLQSGQTLL*GRGQRR Trigger: TCTCCTCTGTCCCCTGCCTCAAAGAAGTGTTTGACC...AGACTGTAAAGAGCTGAAGTGCTCACTACTCAGAGACTGGGGTGATAAAGCCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037484.15 ENSMUST00000164859.8 |
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| CDS-3UTR GCA 90 bp | GTCTCCCCCAAGAGTAAATGCTGTGTCTGTCACTGGGAAGGGGGAGCCTTCCAGCTGGTCCTTCATTCTTaGTTTTCGTGGTATGACAAT | + |
|
Preference number: 4 (lower is better) Translates to: VSPKSKCCVCHWEGGAFQLVLHS*FSWYDN Trigger: ATTGTCATACCACGAAAAGCAAGAATGAAGGACCAG...CTGGAAGGCTCCCCCTTCCCAGTGACAGACACAGCATTTACTCTTGGGGGAGAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000037484.15 ENSMUST00000164859.8 |
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| CDS-3UTR GCA 90 bp | TCTCCCCCAAGAGTAAATGCTGTGTCTGTCACTGGGAAGGGGGAGCCTTCCAGGCTGGTCCTTCATTCTTaGTTTTCGTGGTATGACAAT | + |
|
Preference number: 4 (lower is better) Translates to: SPPRVNAVSVTGKGEPSRLVLHS*FSWYDN Trigger: ATTGTCATACCACGAAAAGCAAGAATGAAGGACCAG...CCTGGAAGGCTCCCCCTTCCCAGTGACAGACACAGCATTTACTCTTGGGGGAGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000037484.15 ENSMUST00000164859.8 |
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| CDS-3UTR TCA 90 bp | TCTCCCCCAAGAGTAAATGCTGTGTCTGTCACTGGGAAGGGGGAGCCTTCCAGGTTGCTTTTCGTGGTATaGCAATGGTATTTAACTCAG | + |
|
Preference number: 4 (lower is better) Translates to: SPPRVNAVSVTGKGEPSRLLFVV*QWYLTQ Trigger: CTGAGTTAAATACCATTGTCATACCACGAAAAGCAA...CCTGGAAGGCTCCCCCTTCCCAGTGACAGACACAGCATTTACTCTTGGGGGAGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000037484.15 ENSMUST00000164859.8 |
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| CDS-3UTR TCA 90 bp | CTGAGTAGTGAGCACTTCAGCTCTTTACAGTCTCCCCCAAGAGTAAATGCTGTGGCGCGCAGTTTCCTTTaGTGCTCTCTTCATAGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: LSSEHFSSLQSPPRVNAVARSFL*CSLHSF Trigger: GAAGCTATGAAGAGAGCATCAAAGGAAACTGCGCGC...CACAGCATTTACTCTTGGGGGAGACTGTAAAGAGCTGAAGTGCTCACTACTCAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000037484.15 ENSMUST00000164859.8 |
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| CDS-3UTR TCA 90 bp | AGTAGTGAGCACTTCAGCTCTTTACAGTCTCCCCCAAGAGTAAATGCTGTGTCTGGCAGCAGAGTTCTGTaGACAAGCACCCATCTCACT | + |
|
Preference number: 4 (lower is better) Translates to: SSEHFSSLQSPPRVNAVSGSRVL*TSTHLT Trigger: AGTGAGATGGGTGCTTGTTCACAGAACTCTGCTGCC...AGACACAGCATTTACTCTTGGGGGAGACTGTAAAGAGCTGAAGTGCTCACTACT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000037484.15 ENSMUST00000164859.8 |
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| CDS-3UTR TCA 90 bp | GAGCACTTCAGCTCTTTACAGTCTCCCCCAAGAGTAAATGCTGTGTCTGTCACTGATGATGTACAGAACTaGAGCATTCATCCCGGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: EHFSSLQSPPRVNAVSVTDDVQN*SIHPGG Trigger: GCCTCCGGGATGAATGCTTCAGTTCTGTACATCATC...AGTGACAGACACAGCATTTACTCTTGGGGGAGACTGTAAAGAGCTGAAGTGCTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000037484.15 ENSMUST00000164859.8 |
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| CDS-3UTR GCA 90 bp | GCTTTATCACCCCAGTCTCTGAGTAGTGAGCACTTCAGCTCTTTACAGTCTCCCCTACAGTGCCGCTTCTaGTGGACTTTCCTCTTAATC | + |
|
Preference number: 4 (lower is better) Translates to: ALSPQSLSSEHFSSLQSPLQCRF*WTFLLI Trigger: GATTAAGAGGAAAGTCCAGCAGAAGCGGCACTGTAG...GGGAGACTGTAAAGAGCTGAAGTGCTCACTACTCAGAGACTGGGGTGATAAAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037484.15 ENSMUST00000164859.8 |
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| CDS-3UTR GCA 90 bp | GCACTTCAGCTCTTTACAGTCTCCCCCAAGAGTAAATGCTGTGTCTGTCACTGGCTACAGTGCCGCTTCTaGTGGACTTTCCTCTTAATC | + |
|
Preference number: 4 (lower is better) Translates to: ALQLFTVSPKSKCCVCHWLQCRF*WTFLLI Trigger: GATTAAGAGGAAAGTCCAGCAGAAGCGGCACTGTAG...CCAGTGACAGACACAGCATTTACTCTTGGGGGAGACTGTAAAGAGCTGAAGTGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000037484.15 ENSMUST00000164859.8 |
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| 3UTR CAA 72 bp | CACTGCAAGATGAACTGCAAAGGTCCTGTTGGATATTaGAGATTCAAGCTGCCGTTGCCAGGACAGCCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: HCKMNCKGPVGY*RFKLPLPGQPS Trigger: TGAAGGCTGTCCTGGCAACGGCAGCTTGAATCTCAAATATCCAACAGGACCTTTGCAGTTCATCTTGCAGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037484.15 ENSMUST00000175999.8 |
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| CDS-3UTR TCA 90 bp | AGTAGTGAGCACTTCAGCTCTTTACAGTCTCCCCCAAGAGTAAATGCTGTGTCTGCGCGCAGTTTCCTTTaGTGCTCTCTTCATAGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: SSEHFSSLQSPPRVNAVSARSFL*CSLHSF Trigger: GAAGCTATGAAGAGAGCATCAAAGGAAACTGCGCGC...AGACACAGCATTTACTCTTGGGGGAGACTGTAAAGAGCTGAAGTGCTCACTACT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000037484.15 ENSMUST00000164859.8 |
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| CDS-3UTR TCA 90 bp | CCCCAGTCTCTGAGTAGTGAGCACTTCAGCTCTTTACAGTCTCCCCCAAGAGTATATTTAACATCTTCTTaGTCACAGGCTTGGCAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: PQSLSSEHFSSLQSPPRVYLTSS*SQAWQQ Trigger: CTGCTGCCAAGCCTGTGATCAAGAAGATGTTAAATA...TACTCTTGGGGGAGACTGTAAAGAGCTGAAGTGCTCACTACTCAGAGACTGGGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000037484.15 ENSMUST00000164859.8 |
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| CDS-3UTR GCA 90 bp | GATGAAAACTGTTCCTTAACTAGTTCTGTCATCCAGGCTGCAGCACACTGCAAGTCTGGGTTCCTGCTCTaGTCTACAGGCATCTGCATT | + |
|
Preference number: 4 (lower is better) Translates to: DENCSLTSSVIQAAAHCKSGFLL*STGICI Trigger: AATGCAGATGCCTGTAGAGCAGAGCAGGAACCCAGA...CTTGCAGTGTGCTGCAGCCTGGATGACAGAACTAGTTAAGGAACAGTTTTCATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037484.15 |
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| CDS-3UTR CCA 90 bp | CAGGCTTTATCACCCCAGTCTCTGAGTAGTGAGCACTTCAGCTCTTTACAGTCTCAGTGCCGCTTCTGCTaGACTTTCCTCTTAATCTCA | + |
|
Preference number: 4 (lower is better) Translates to: QALSPQSLSSEHFSSLQSQCRFC*TFLLIS Trigger: TGAGATTAAGAGGAAAGTCCAGCAGAAGCGGCACTG...AGACTGTAAAGAGCTGAAGTGCTCACTACTCAGAGACTGGGGTGATAAAGCCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037484.15 ENSMUST00000164859.8 |
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| CDS-3UTR CCA 90 bp | GAGCACTTCAGCTCTTTACAGTCTCCCCCAAGAGTAAATGCTGTGTCTGTCACTCCAATGAAGATTGTATaGCTCTCCCCAGCTTCTTCG | + |
|
Preference number: 4 (lower is better) Translates to: EHFSSLQSPPRVNAVSVTPMKIV*LSPASS Trigger: CGAAGAAGCTGGGGAGAGCCATACAATCTTCATTGG...AGTGACAGACACAGCATTTACTCTTGGGGGAGACTGTAAAGAGCTGAAGTGCTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000037484.15 ENSMUST00000164859.8 |
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| CDS-3UTR CCA 90 bp | GCTTTATCACCCCAGTCTCTGAGTAGTGAGCACTTCAGCTCTTTACAGTCTCCCCTGTTGTGGGACTTTTaGGTTGGACCCTTTCATAAC | + |
|
Preference number: 4 (lower is better) Translates to: ALSPQSLSSEHFSSLQSPLLWDF*VGPFHN Trigger: GTTATGAAAGGGTCCAACCCAAAAGTCCCACAACAG...GGGAGACTGTAAAGAGCTGAAGTGCTCACTACTCAGAGACTGGGGTGATAAAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000037484.15 ENSMUST00000164859.8 |
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| CDS-3UTR TCA 90 bp | CTTTTATTTGCTCCATGGGGTTACAACAAGGGCCTCCTGCACGGTAAACCTGCACTTAAGGCATCTGGATaGTGTACAGAACTGAAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: LLFAPWGYNKGLLHGKPALKASG*CTELKH Trigger: ATGCTTCAGTTCTGTACATCATCCAGATGCCTTAAG...TGCAGGTTTACCGTGCAGGAGGCCCTTGTTGTAACCCCATGGAGCAAATAAAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037484.15 |
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| CDS-3UTR TCA 90 bp | AGTAGTGAGCACTTCAGCTCTTTACAGTCTCCCCCAAGAGTAAATGCTGTGTCTCCTCTGAGAAGTCAATaGGCTCATCTTCAAGCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: SSEHFSSLQSPPRVNAVSPLRSQ*AHLQAA Trigger: AGCTGCTTGAAGATGAGCTCATTGACTTCTCAGAGG...AGACACAGCATTTACTCTTGGGGGAGACTGTAAAGAGCTGAAGTGCTCACTACT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000037484.15 ENSMUST00000164859.8 |
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| CDS-3UTR GCA 90 bp | TTTACAGTCTCCCCCAAGAGTAAATGCTGTGTCTGTCACTGGGAAGGGGGAGCCAGGGTGAATAAAAGCTaGATGACTGTTTACTTTACG | + |
|
Preference number: 4 (lower is better) Translates to: FTVSPKSKCCVCHWEGGARVNKS*MTVYFT Trigger: CGTAAAGTAAACAGTCATGCAGCTTTTATTCACCCT...GGCTCCCCCTTCCCAGTGACAGACACAGCATTTACTCTTGGGGGAGACTGTAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000037484.15 ENSMUST00000164859.8 |
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| CDS-3UTR GCA 90 bp | GCTTTATCACCCCAGTCTCTGAGTAGTGAGCACTTCAGCTCTTTACAGTCTCCCACACTTTACACTGTATaGGTTTCTCCGGTAACAAGG | + |
|
Preference number: 4 (lower is better) Translates to: ALSPQSLSSEHFSSLQSPTLYTV*VSPVTR Trigger: CCTTGTTACCGGAGAAACGCATACAGTGTAAAGTGT...GGGAGACTGTAAAGAGCTGAAGTGCTCACTACTCAGAGACTGGGGTGATAAAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037484.15 ENSMUST00000164859.8 |
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| CDS-3UTR GCA 90 bp | GCACTTCAGCTCTTTACAGTCTCCCCCAAGAGTAAATGCTGTGTCTGTCACTGGACACTTTACACTGTATaGGTTTCTCCGGTAACAAGG | + |
|
Preference number: 4 (lower is better) Translates to: ALQLFTVSPKSKCCVCHWTLYTV*VSPVTR Trigger: CCTTGTTACCGGAGAAACGCATACAGTGTAAAGTGT...CCAGTGACAGACACAGCATTTACTCTTGGGGGAGACTGTAAAGAGCTGAAGTGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000037484.15 ENSMUST00000164859.8 |
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| CDS-3UTR CCA 90 bp | GCTTTATCACCCCAGTCTCTGAGTAGTGAGCACTTCAGCTCTTTACAGTCTCCCTTTGTGGACATAAGGTaGGTATTCTTTCCTCTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: ALSPQSLSSEHFSSLQSPFVDIR*VFFPLS Trigger: GCTCAGAGGAAAGAATACCCACCTTATGTCCACAAA...GGGAGACTGTAAAGAGCTGAAGTGCTCACTACTCAGAGACTGGGGTGATAAAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037484.15 |
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| CDS-3UTR CCA 90 bp | GCACTTCAGCTCTTTACAGTCTCCCCCAAGAGTAAATGCTGTGTCTGTCACTGGAGGCCATTCTCACTTTaGGTTCTATCACAAATGTCC | + |
|
Preference number: 4 (lower is better) Translates to: ALQLFTVSPKSKCCVCHWRPFSL*VLSQMS Trigger: GGACATTTGTGATAGAACCCAAAGTGAGAATGGCCT...CCAGTGACAGACACAGCATTTACTCTTGGGGGAGACTGTAAAGAGCTGAAGTGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000037484.15 ENSMUST00000164859.8 |
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| CDS-3UTR CCA 90 bp | CAGGCTTTATCACCCCAGTCTCTGAGTAGTGAGCACTTCAGCTCTTTACAGTCTCTGTTGTGGGACTTTTaGGTTGGACCCTTTCATAAC | + |
|
Preference number: 4 (lower is better) Translates to: QALSPQSLSSEHFSSLQSLLWDF*VGPFHN Trigger: GTTATGAAAGGGTCCAACCCAAAAGTCCCACAACAG...AGACTGTAAAGAGCTGAAGTGCTCACTACTCAGAGACTGGGGTGATAAAGCCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037484.15 ENSMUST00000164859.8 |
||
| 3UTR CAA 72 bp | AGAACTGAAGCATTCATCCCGGAGGCCATTCTCACTTaGGGTTCTATCACAAATGTCCTGGCACGTAGATTC | + |
|
Preference number: 4 (lower is better) Translates to: RTEAFIPEAILT*GSITNVLARRF Trigger: GAATCTACGTGCCAGGACATTTGTGATAGAACCCAAAGTGAGAATGGCCTCCGGGATGAATGCTTCAGTTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175999.8 |
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| CDS-3UTR TCA 90 bp | CTGAGTAGTGAGCACTTCAGCTCTTTACAGTCTCCCCCAAGAGTAAATGCTGTGCACCGTAGTTTAGTCTaGTTTTGCTTAAGGCATCTG | + |
|
Preference number: 4 (lower is better) Translates to: LSSEHFSSLQSPPRVNAVHRSLV*FCLRHL Trigger: CAGATGCCTTAAGCAAAATCAGACTAAACTACGGTG...CACAGCATTTACTCTTGGGGGAGACTGTAAAGAGCTGAAGTGCTCACTACTCAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000037484.15 ENSMUST00000164859.8 |
||
| CDS-3UTR GCA 90 bp | GCACTTCAGCTCTTTACAGTCTCCCCCAAGAGTAAATGCTGTGTCTGTCACTGGTACAGGCAACAAGTCTaGTATTGGCTTCGTCAAAAA | + |
|
Preference number: 4 (lower is better) Translates to: ALQLFTVSPKSKCCVCHWYRQQV*YWLRQK Trigger: TTTTTGACGAAGCCAATAGCAGACTTGTTGCCTGTA...CCAGTGACAGACACAGCATTTACTCTTGGGGGAGACTGTAAAGAGCTGAAGTGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000037484.15 ENSMUST00000164859.8 |
||
| CDS-3UTR CCA 90 bp | CCCCAGTCTCTGAGTAGTGAGCACTTCAGCTCTTTACAGTCTCCCCCAAGAGTATTCTTTTCCACATTTTaGGCAATATTCACGCTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: PQSLSSEHFSSLQSPPRVFFSTF*AIFTLF Trigger: GAACAGCGTGAATATTGCCCAAAATGTGGAAAAGAA...TACTCTTGGGGGAGACTGTAAAGAGCTGAAGTGCTCACTACTCAGAGACTGGGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000037484.15 ENSMUST00000164859.8 |
||
| CDS-3UTR CCA 90 bp | CAGGCTTTATCACCCCAGTCTCTGAGTAGTGAGCACTTCAGCTCTTTACAGTCTCTATCACAAATGTCCTaGCACGTAGATTCTCCGTTA | + |
|
Preference number: 4 (lower is better) Translates to: QALSPQSLSSEHFSSLQSLSQMS*HVDSPL Trigger: TAACGGAGAATCTACGTGCCAGGACATTTGTGATAG...AGACTGTAAAGAGCTGAAGTGCTCACTACTCAGAGACTGGGGTGATAAAGCCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037484.15 ENSMUST00000164859.8 |
||
| CDS-3UTR TCA 90 bp | GCACTTCAGCTCTTTACAGTCTCCCCCAAGAGTAAATGCTGTGTCTGTCACTGGTGCTATCATCACAGGTaGCCAAAATATCAATTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: ALQLFTVSPKSKCCVCHWCYHHR*PKYQLE Trigger: TTCCAATTGATATTTTGGTCACCTGTGATGATAGCA...CCAGTGACAGACACAGCATTTACTCTTGGGGGAGACTGTAAAGAGCTGAAGTGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000037484.15 ENSMUST00000164859.8 |
||
| CDS-3UTR TCA 90 bp | CTGAGTAGTGAGCACTTCAGCTCTTTACAGTCTCCCCCAAGAGTAAATGCTGTGTTCCTCCAGGTAAAATaGCTTTCCCATTTGTCTGTA | + |
|
Preference number: 4 (lower is better) Translates to: LSSEHFSSLQSPPRVNAVFLQVK*LSHLSV Trigger: TACAGACAAATGGGAAAGTCATTTTACCTGGAGGAA...CACAGCATTTACTCTTGGGGGAGACTGTAAAGAGCTGAAGTGCTCACTACTCAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000037484.15 ENSMUST00000164859.8 |
||
| CDS-3UTR TCA 90 bp | CAGTCTCTGAGTAGTGAGCACTTCAGCTCTTTACAGTCTCCCCCAAGAGTAAATCTTAAGGCATCTGGATaGTGTACAGAACTGAAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: QSLSSEHFSSLQSPPRVNLKASG*CTELKH Trigger: ATGCTTCAGTTCTGTACATCATCCAGATGCCTTAAG...ATTTACTCTTGGGGGAGACTGTAAAGAGCTGAAGTGCTCACTACTCAGAGACTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000037484.15 ENSMUST00000164859.8 |
||
| CDS-3UTR GCA 90 bp | CCCCAGTCTCTGAGTAGTGAGCACTTCAGCTCTTTACAGTCTCCCCCAAGAGTATCAAAAATATCTACATaGCGTGTCCACGTTTTTACT | + |
|
Preference number: 4 (lower is better) Translates to: PQSLSSEHFSSLQSPPRVSKIST*RVHVFT Trigger: AGTAAAAACGTGGACACGGCATGTAGATATTTTTGA...TACTCTTGGGGGAGACTGTAAAGAGCTGAAGTGCTCACTACTCAGAGACTGGGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt. Matches the following 2 transcripts: ENSMUST00000037484.15 ENSMUST00000164859.8 |
||
| CDS-3UTR CCA 90 bp | GCTTTATCACCCCAGTCTCTGAGTAGTGAGCACTTCAGCTCTTTACAGTCTCCCTCAGAAACCTCTAAATaGGTCAAACACTTCTTTGAG | + |
|
Preference number: 4 (lower is better) Translates to: ALSPQSLSSEHFSSLQSPSETSK*VKHFFE Trigger: CTCAAAGAAGTGTTTGACCCATTTAGAGGTTTCTGA...GGGAGACTGTAAAGAGCTGAAGTGCTCACTACTCAGAGACTGGGGTGATAAAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037484.15 ENSMUST00000164859.8 |
||
| CDS-3UTR CCA 90 bp | GATGAAAACTGTTCCTTAACTAGTTCTGTCATCCAGGCTGCAGCACACTGCAAGACTGCTGGTATTGCCTaGAGAAACACTACTGGTAAT | + |
|
Preference number: 4 (lower is better) Translates to: DENCSLTSSVIQAAAHCKTAGIA*RNTTGN Trigger: ATTACCAGTAGTGTTTCTCCAGGCAATACCAGCAGT...CTTGCAGTGTGCTGCAGCCTGGATGACAGAACTAGTTAAGGAACAGTTTTCATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037484.15 |
||
| CDS-3UTR CCA 90 bp | CAGTCTCTGAGTAGTGAGCACTTCAGCTCTTTACAGTCTCCCCCAAGAGTAAATACTGCTGGTATTGCCTaGAGAAACACTACTGGTAAT | + |
|
Preference number: 4 (lower is better) Translates to: QSLSSEHFSSLQSPPRVNTAGIA*RNTTGN Trigger: ATTACCAGTAGTGTTTCTCCAGGCAATACCAGCAGT...ATTTACTCTTGGGGGAGACTGTAAAGAGCTGAAGTGCTCACTACTCAGAGACTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000037484.15 ENSMUST00000164859.8 |
||
| 3UTR CAA 72 bp | GCTGTGCCTGCGGTGCTTTCACTCAGTTTCTTATTGTaGCTTAACATGTTAAGTCCAATTGGGTTGCCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: AVPAVLSLSFLL*LNMLSPIGLPF Trigger: GAAAGGCAACCCAATTGGACTTAACATGTTAAGCAACAATAAGAAACTGAGTGAAAGCACCGCAGGCACAGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175999.8 |
||
| CDS-3UTR TCA 90 bp | CAGGCTTTATCACCCCAGTCTCTGAGTAGTGAGCACTTCAGCTCTTTACAGTCTTGCTATCATCACAGGTaGCCAAAATATCAATTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: QALSPQSLSSEHFSSLQSCYHHR*PKYQLE Trigger: TTCCAATTGATATTTTGGTCACCTGTGATGATAGCA...AGACTGTAAAGAGCTGAAGTGCTCACTACTCAGAGACTGGGGTGATAAAGCCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037484.15 ENSMUST00000164859.8 |
||
| CDS-3UTR GCA 90 bp | CACACTCCTTTGGAACTCACTTATGACATTTTTACAGGCTTTATCACCCCAGTCCAGCTTCTGGTAAACTaGTGGTATTGCCTGGAGAAA | + |
|
Preference number: 4 (lower is better) Translates to: HTPLELTYDIFTGFITPVQLLVN*WYCLEK Trigger: TTTCTCCAGGCAATACCAGCAGTTTACCAGAAGCTG...GACTGGGGTGATAAAGCCTGTAAAAATGTCATAAGTGAGTTCCAAAGGAGTGTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000037484.15 ENSMUST00000164859.8 |
||
| CDS-3UTR GCA 90 bp | CTGAGTAGTGAGCACTTCAGCTCTTTACAGTCTCCCCCAAGAGTAAATGCTGTGACAGTAGGCTTTAAATaGCACTGTCCTATTTCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: LSSEHFSSLQSPPRVNAVTVGFK*HCPISE Trigger: TTCAGAAATAGGACAGTGGCATTTAAAGCCTACTGT...CACAGCATTTACTCTTGGGGGAGACTGTAAAGAGCTGAAGTGCTCACTACTCAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000037484.15 ENSMUST00000164859.8 |
||
| CDS-3UTR CCA 90 bp | TGCAAAGGTCCTGTTGGATATTTGAGATTCAAGCTGCCGTTGCCAGGACAGCCTCATGTTAAGTCCAATTaGGTTGCCTTTCAAAGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: CKGPVGYLRFKLPLPGQPHVKSN*VAFQSF Trigger: AAAACTTTGAAAGGCAACCCAATTGGACTTAACATG...AGGCTGTCCTGGCAACGGCAGCTTGAATCTCAAATATCCAACAGGACCTTTGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037484.15 |
||
| CDS-3UTR CCA 90 bp | GAGCACTTCAGCTCTTTACAGTCTCCCCCAAGAGTAAATGCTGTGTCTGTCACTTTCTTTTCCACATTTTaGGCAATATTCACGCTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: EHFSSLQSPPRVNAVSVTFFSTF*AIFTLF Trigger: GAACAGCGTGAATATTGCCCAAAATGTGGAAAAGAA...AGTGACAGACACAGCATTTACTCTTGGGGGAGACTGTAAAGAGCTGAAGTGCTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000037484.15 ENSMUST00000164859.8 |
||
| CDS-3UTR CCA 90 bp | GAGCACTTCAGCTCTTTACAGTCTCCCCCAAGAGTAAATGCTGTGTCTGTCACTATGGAATTACCAAGCTaGTCCTTCATTCTTGCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: EHFSSLQSPPRVNAVSVTMELPS*SFILAF Trigger: AAAAGCAAGAATGAAGGACCAGCTTGGTAATTCCAT...AGTGACAGACACAGCATTTACTCTTGGGGGAGACTGTAAAGAGCTGAAGTGCTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000037484.15 ENSMUST00000164859.8 |
||
| CDS-3UTR CCA 90 bp | TGGAACTCACTTATGACATTTTTACAGGCTTTATCACCCCAGTCTCTGAGTAGTCCAATGAAGATTGTATaGCTCTCCCCAGCTTCTTCG | + |
|
Preference number: 4 (lower is better) Translates to: WNSLMTFLQALSPQSLSSPMKIV*LSPASS Trigger: CGAAGAAGCTGGGGAGAGCCATACAATCTTCATTGG...ACTACTCAGAGACTGGGGTGATAAAGCCTGTAAAAATGTCATAAGTGAGTTCCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000037484.15 ENSMUST00000164859.8 |
||
| CDS-3UTR TCA 90 bp | GATGAAAACTGTTCCTTAACTAGTTCTGTCATCCAGGCTGCAGCACACTGCAAGTTGCTTTTCGTGGTATaGCAATGGTATTTAACTCAG | + |
|
Preference number: 4 (lower is better) Translates to: DENCSLTSSVIQAAAHCKLLFVV*QWYLTQ Trigger: CTGAGTTAAATACCATTGTCATACCACGAAAAGCAA...CTTGCAGTGTGCTGCAGCCTGGATGACAGAACTAGTTAAGGAACAGTTTTCATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037484.15 |
||
| CDS-3UTR TCA 90 bp | AGAAAGCCCGTGTTCACAGATGAAAACTGTTCCTTAACTAGTTCTGTCATCCAGAATTTTGACAACATTTaGACGAGAAGGGCCTCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: RKPVFTDENCSLTSSVIQNFDNI*TRRASE Trigger: CTCAGAGGCCCTTCTCGTTCAAATGTTGTCAAAATT...CTGGATGACAGAACTAGTTAAGGAACAGTTTTCATCTGTGAACACGGGCTTTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037484.15 |
||
| CDS-3UTR GCA 90 bp | CACACTCCTTTGGAACTCACTTATGACATTTTTACAGGCTTTATCACCCCAGTCCCTTCACTTAGACAGTaGAGGTCCTCATTAGTAACA | + |
|
Preference number: 4 (lower is better) Translates to: HTPLELTYDIFTGFITPVPSLRQ*RSSLVT Trigger: TGTTACTAATGAGGACCTGCACTGTCTAAGTGAAGG...GACTGGGGTGATAAAGCCTGTAAAAATGTCATAAGTGAGTTCCAAAGGAGTGTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000037484.15 ENSMUST00000164859.8 |
||
| CDS-3UTR GCA 90 bp | GATGAAAACTGTTCCTTAACTAGTTCTGTCATCCAGGCTGCAGCACACTGCAAGACAGTAGGCTTTAAATaGCACTGTCCTATTTCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: DENCSLTSSVIQAAAHCKTVGFK*HCPISE Trigger: TTCAGAAATAGGACAGTGGCATTTAAAGCCTACTGT...CTTGCAGTGTGCTGCAGCCTGGATGACAGAACTAGTTAAGGAACAGTTTTCATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037484.15 |
||
| CDS-3UTR CCA 90 bp | AGTAGTGAGCACTTCAGCTCTTTACAGTCTCCCCCAAGAGTAAATGCTGTGTCTATGGAATTACCAAGCTaGTCCTTCATTCTTGCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: SSEHFSSLQSPPRVNAVSMELPS*SFILAF Trigger: AAAAGCAAGAATGAAGGACCAGCTTGGTAATTCCAT...AGACACAGCATTTACTCTTGGGGGAGACTGTAAAGAGCTGAAGTGCTCACTACT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000037484.15 ENSMUST00000164859.8 |
||
| CDS-3UTR CCA 90 bp | CTTTGGAACTCACTTATGACATTTTTACAGGCTTTATCACCCCAGTCTCTGAGTAAGCACCCATCTCACTaGCAGAAGAAACACAACTGT | + |
|
Preference number: 4 (lower is better) Translates to: LWNSLMTFLQALSPQSLSKHPSH*QKKHNC Trigger: ACAGTTGTGTTTCTTCTGCCAGTGAGATGGGTGCTT...ACTCAGAGACTGGGGTGATAAAGCCTGTAAAAATGTCATAAGTGAGTTCCAAAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000037484.15 ENSMUST00000164859.8 |
||
| 3UTR CAA 72 bp | CAATGTTTTCTATTTAACATCTTCTTGATCACAGGCTaGGCAGCAGAGTTCTGTGAACAAGCACCCATCTCA | + |
|
Preference number: 4 (lower is better) Translates to: QCFLFNIFLITG*AAEFCEQAPIS Trigger: TGAGATGGGTGCTTGTTCACAGAACTCTGCTGCCAAGCCTGTGATCAAGAAGATGTTAAATAGAAAACATTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000175999.8 |
||
| CDS-3UTR GCA 90 bp | CTTTGGAACTCACTTATGACATTTTTACAGGCTTTATCACCCCAGTCTCTGAGTTACAGGCAACAAGTCTaGTATTGGCTTCGTCAAAAA | + |
|
Preference number: 4 (lower is better) Translates to: LWNSLMTFLQALSPQSLSYRQQV*YWLRQK Trigger: TTTTTGACGAAGCCAATAGCAGACTTGTTGCCTGTA...ACTCAGAGACTGGGGTGATAAAGCCTGTAAAAATGTCATAAGTGAGTTCCAAAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000037484.15 ENSMUST00000164859.8 |
||
| 3UTR CAA 72 bp | CAGTCACTGAAGTTGTTCTGTTGTGGGACTTTTGGGTaGGACCCTTTCATAACATCTTTGGAAAAACTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: QSLKLFCCGTFG*DPFITSLEKLL Trigger: AAGAAGTTTTTCCAAAGATGTTATGAAAGGGTCCAACCCAAAAGTCCCACAACAGAACAACTTCAGTGACTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000175999.8 |
||
| CDS-3UTR GCA 90 bp | TGGAACTCACTTATGACATTTTTACAGGCTTTATCACCCCAGTCTCTGAGTAGTAGGGTGAATAAAAGCTaGATGACTGTTTACTTTACG | + |
|
Preference number: 4 (lower is better) Translates to: WNSLMTFLQALSPQSLSSRVNKS*MTVYFT Trigger: CGTAAAGTAAACAGTCATGCAGCTTTTATTCACCCT...ACTACTCAGAGACTGGGGTGATAAAGCCTGTAAAAATGTCATAAGTGAGTTCCA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000037484.15 ENSMUST00000164859.8 |
||
| CDS-3UTR TCA 90 bp | CAGAAGATACAGAAAAGAAATTCTTATGTGAAAGAAAGCCCGTGTTCACAGATGTTCCTCCAGGTAAAATaGCTTTCCCATTTGTCTGTA | + |
|
Preference number: 4 (lower is better) Translates to: QKIQKRNSYVKESPCSQMFLQVK*LSHLSV Trigger: TACAGACAAATGGGAAAGTCATTTTACCTGGAGGAA...CATCTGTGAACACGGGCTTTCTTTCACATAAGAATTTCTTTTCTGTATCTTCTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037484.15 |
||
| CDS-3UTR CCA 90 bp | TGGAACTCACTTATGACATTTTTACAGGCTTTATCACCCCAGTCTCTGAGTAGTCAACAAGTCTGCTATTaGCTTCGTCAAAAAGAATTT | + |
|
Preference number: 4 (lower is better) Translates to: WNSLMTFLQALSPQSLSSQQVCY*LRQKEF Trigger: AAATTCTTTTTGACGAAGCCAATAGCAGACTTGTTG...ACTACTCAGAGACTGGGGTGATAAAGCCTGTAAAAATGTCATAAGTGAGTTCCA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000037484.15 ENSMUST00000164859.8 |
||
| 3UTR CAA 72 bp | TTCTTATTGTTGCTTAACATGTTAAGTCCAATTGGGTaGCCTTTCAAAGTTTTAAAGCCGTCAGTCTTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: FLLLLNMLSPIG*PFKVLKPSVLL Trigger: GAGCAAGACTGACGGCTTTAAAACTTTGAAAGGCAACCCAATTGGACTTAACATGTTAAGCAACAATAAGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000175999.8 |
||
| CDS-3UTR GCA 90 bp | CAGAAGATACAGAAAAGAAATTCTTATGTGAAAGAAAGCCCGTGTTCACAGATGTCAAAAATATCTACATaGCGTGTCCACGTTTTTACT | + |
|
Preference number: 4 (lower is better) Translates to: QKIQKRNSYVKESPCSQMSKIST*RVHVFT Trigger: AGTAAAAACGTGGACACGGCATGTAGATATTTTTGA...CATCTGTGAACACGGGCTTTCTTTCACATAAGAATTTCTTTTCTGTATCTTCTG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000037484.15 |
||
| CDS TCA 90 bp | TGGGTATTCTTTCCTCTGAGCCGCTGTTCTGATGCCTGGCGTCTGTaGGTGAGCATGATGGAAGCGCCTCCCATGAACCACAGTTCCAGA | + |
|
Preference number: 5 (lower is better) Translates to: WVFFPLSRCSDAWRL*VSMMEAPPMNHSSR Trigger: TCTGGAACTGTGGTTCATGGGAGGCGCTTCCATCATGCTCACTCACAGACGCCAGGCATCAGAACAGCGGCTCAGAGGAAAGAATACCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037484.15 |
||
| CDS-3UTR CAA 90 bp | GTCTCCCCCAAGAGTAAATGCTGTGTCTGTCACTGGGAAGGGGGAGCCTTCCAGGGTAAACTGCTGGTATaGCCTGGAGAAACACTACTG | + |
|
Preference number: 5 (lower is better) Translates to: VSPKSKCCVCHWEGGAFQGKLLV*PGETLL Trigger: CAGTAGTGTTTCTCCAGGCAATACCAGCAGTTTACC...CTGGAAGGCTCCCCCTTCCCAGTGACAGACACAGCATTTACTCTTGGGGGAGAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000037484.15 ENSMUST00000164859.8 |
||
| CDS-3UTR CAA 90 bp | TTATCACCCCAGTCTCTGAGTAGTGAGCACTTCAGCTCTTTACAGTCTCCCCCAGGGTCAAACACTTCTTaGAGGCAGGGGACAGAGGAG | + |
|
Preference number: 5 (lower is better) Translates to: LSPQSLSSEHFSSLQSPPGSNTS*RQGTEE Trigger: CTCCTCTGTCCCCTGCCTCAAAGAAGTGTTTGACCC...TGGGGGAGACTGTAAAGAGCTGAAGTGCTCACTACTCAGAGACTGGGGTGATAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000037484.15 ENSMUST00000164859.8 |
||
| CDS-3UTR CAA 90 bp | TCTCCCCCAAGAGTAAATGCTGTGTCTGTCACTGGGAAGGGGGAGCCTTCCAGGTGTGGGACTTTTGGGTaGGACCCTTTCATAACATCT | + |
|
Preference number: 5 (lower is better) Translates to: SPPRVNAVSVTGKGEPSRCGTFG*DPFITS Trigger: AGATGTTATGAAAGGGTCCAACCCAAAAGTCCCACA...CCTGGAAGGCTCCCCCTTCCCAGTGACAGACACAGCATTTACTCTTGGGGGAGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000037484.15 ENSMUST00000164859.8 |
||
| CDS-3UTR CAA 90 bp | GTCTCCCCCAAGAGTAAATGCTGTGTCTGTCACTGGGAAGGGGGAGCCTTCCAGCTATTTAACATCTTCTaGATCACAGGCTTGGCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: VSPKSKCCVCHWEGGAFQLFNIF*ITGLAA Trigger: TGCTGCCAAGCCTGTGATCAAGAAGATGTTAAATAG...CTGGAAGGCTCCCCCTTCCCAGTGACAGACACAGCATTTACTCTTGGGGGAGAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000037484.15 ENSMUST00000164859.8 |
||
| CDS-3UTR CAA 90 bp | GTCTCCCCCAAGAGTAAATGCTGTGTCTGTCACTGGGAAGGGGGAGCCTTCCAGCAGAGTTCTGATGAATaGATGTTCTTAGCAATGGTC | + |
|
Preference number: 5 (lower is better) Translates to: VSPKSKCCVCHWEGGAFQQSSDE*MFLAMV Trigger: GACCATTGCTAAGAACATCAATTCATCAGAACTCTG...CTGGAAGGCTCCCCCTTCCCAGTGACAGACACAGCATTTACTCTTGGGGGAGAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000037484.15 ENSMUST00000164859.8 |
||
| CDS-3UTR CAA 90 bp | TTTACAGTCTCCCCCAAGAGTAAATGCTGTGTCTGTCACTGGGAAGGGGGAGCCCTATTTAACATCTTCTaGATCACAGGCTTGGCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: FTVSPKSKCCVCHWEGGALFNIF*ITGLAA Trigger: TGCTGCCAAGCCTGTGATCAAGAAGATGTTAAATAG...GGCTCCCCCTTCCCAGTGACAGACACAGCATTTACTCTTGGGGGAGACTGTAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000037484.15 ENSMUST00000164859.8 |
||
| CDS-3UTR CAA 90 bp | GCACTTCAGCTCTTTACAGTCTCCCCCAAGAGTAAATGCTGTGTCTGTCACTGGTCTCTTCATAGCTTCTaGTACAGGCAACAAGTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: ALQLFTVSPKSKCCVCHWSLHSF*YRQQVC Trigger: GCAGACTTGTTGCCTGTACAAGAAGCTATGAAGAGA...CCAGTGACAGACACAGCATTTACTCTTGGGGGAGACTGTAAAGAGCTGAAGTGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000037484.15 ENSMUST00000164859.8 |
||
| CDS-3UTR CAA 90 bp | TTTACAGTCTCCCCCAAGAGTAAATGCTGTGTCTGTCACTGGGAAGGGGGAGCCTGCACTTGGAGTTTTTaGCATGACTGCATTTTCATG | + |
|
Preference number: 5 (lower is better) Translates to: FTVSPKSKCCVCHWEGGACTWSF*HDCIFM Trigger: CATGAAAATGCAGTCATGCAAAAAACTCCAAGTGCA...GGCTCCCCCTTCCCAGTGACAGACACAGCATTTACTCTTGGGGGAGACTGTAAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt. Matches the following 2 transcripts: ENSMUST00000037484.15 ENSMUST00000164859.8 |
||
| CDS-3UTR CAA 90 bp | GCTTTATCACCCCAGTCTCTGAGTAGTGAGCACTTCAGCTCTTTACAGTCTCCCACTGAAGTTGTTCTGTaGTGGGACTTTTGGGTTGGA | + |
|
Preference number: 5 (lower is better) Translates to: ALSPQSLSSEHFSSLQSPTEVVL*WDFWVG Trigger: TCCAACCCAAAAGTCCCACAACAGAACAACTTCAGT...GGGAGACTGTAAAGAGCTGAAGTGCTCACTACTCAGAGACTGGGGTGATAAAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037484.15 ENSMUST00000164859.8 |
||
| CDS-3UTR CAA 90 bp | CTTTTATTTGCTCCATGGGGTTACAACAAGGGCCTCCTGCACGGTAAACCTGCATCCTTCAGCAGCTTCTaGTCTTTACTCTGTGATTCC | + |
|
Preference number: 5 (lower is better) Translates to: LLFAPWGYNKGLLHGKPASFSSF*SLLCDS Trigger: GGAATCACAGAGTAAAGACAAGAAGCTGCTGAAGGA...TGCAGGTTTACCGTGCAGGAGGCCCTTGTTGTAACCCCATGGAGCAAATAAAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037484.15 |
||
| CDS-3UTR CAA 90 bp | TTTACAGTCTCCCCCAAGAGTAAATGCTGTGTCTGTCACTGGGAAGGGGGAGCCTTTCTTTTCCACATTTaGGGCAATATTCACGCTGTT | + |
|
Preference number: 5 (lower is better) Translates to: FTVSPKSKCCVCHWEGGAFLFHI*GNIHAV Trigger: AACAGCGTGAATATTGCCCAAAATGTGGAAAAGAAA...GGCTCCCCCTTCCCAGTGACAGACACAGCATTTACTCTTGGGGGAGACTGTAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000037484.15 ENSMUST00000164859.8 |
||
| CDS-3UTR CAA 90 bp | CCCCAGTCTCTGAGTAGTGAGCACTTCAGCTCTTTACAGTCTCCCCCAAGAGTAATTCAAAGTTACGGCTaGTCGGCAATTTCTTTGCAA | + |
|
Preference number: 5 (lower is better) Translates to: PQSLSSEHFSSLQSPPRVIQSYG*SAISLQ Trigger: TTGCAAAGAAATTGCCGACAAGCCGTAACTTTGAAT...TACTCTTGGGGGAGACTGTAAAGAGCTGAAGTGCTCACTACTCAGAGACTGGGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000037484.15 ENSMUST00000164859.8 |
||
| CDS-3UTR CAA 90 bp | CAGTCTCTGAGTAGTGAGCACTTCAGCTCTTTACAGTCTCCCCCAAGAGTAAATAGATTTGCCCCATCTTaGTCTGCATCTCCTTCACTT | + |
|
Preference number: 5 (lower is better) Translates to: QSLSSEHFSSLQSPPRVNRFAPS*SASPSL Trigger: AAGTGAAGGAGATGCAGACAAAGATGGGGCAAATCT...ATTTACTCTTGGGGGAGACTGTAAAGAGCTGAAGTGCTCACTACTCAGAGACTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000037484.15 |
||
| CDS-3UTR CAA 90 bp | CCCCAGTCTCTGAGTAGTGAGCACTTCAGCTCTTTACAGTCTCCCCCAAGAGTAAACAATACCACAACTTaGGCATTTGGTCTGATTTTC | + |
|
Preference number: 5 (lower is better) Translates to: PQSLSSEHFSSLQSPPRVNNTTT*AFGLIF Trigger: GAAAATCAGACCAAATGCCAAAGTTGTGGTATTGTT...TACTCTTGGGGGAGACTGTAAAGAGCTGAAGTGCTCACTACTCAGAGACTGGGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000037484.15 ENSMUST00000164859.8 |
||
| CDS-3UTR CAA 90 bp | CTTTTATTTGCTCCATGGGGTTACAACAAGGGCCTCCTGCACGGTAAACCTGCACAGAGTTCTGATGAATaGATGTTCTTAGCAATGGTC | + |
|
Preference number: 5 (lower is better) Translates to: LLFAPWGYNKGLLHGKPAQSSDE*MFLAMV Trigger: GACCATTGCTAAGAACATCAATTCATCAGAACTCTG...TGCAGGTTTACCGTGCAGGAGGCCCTTGTTGTAACCCCATGGAGCAAATAAAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037484.15 |
||
| CDS-3UTR CAA 90 bp | TGCAAAGGTCCTGTTGGATATTTGAGATTCAAGCTGCCGTTGCCAGGACAGCCTGCAACAAGTCTGCTATaGGCTTCGTCAAAAAGAATT | + |
|
Preference number: 5 (lower is better) Translates to: CKGPVGYLRFKLPLPGQPATSLL*ASSKRI Trigger: AATTCTTTTTGACGAAGCCAATAGCAGACTTGTTGC...AGGCTGTCCTGGCAACGGCAGCTTGAATCTCAAATATCCAACAGGACCTTTGCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037484.15 |
||
| CDS-3UTR CAA 90 bp | GATGAAAACTGTTCCTTAACTAGTTCTGTCATCCAGGCTGCAGCACACTGCAAGTCTCTTCATAGCTTCTaGTACAGGCAACAAGTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: DENCSLTSSVIQAAAHCKSLHSF*YRQQVC Trigger: GCAGACTTGTTGCCTGTACAAGAAGCTATGAAGAGA...CTTGCAGTGTGCTGCAGCCTGGATGACAGAACTAGTTAAGGAACAGTTTTCATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037484.15 |
||
| CDS-3UTR CAA 90 bp | GCACTTCAGCTCTTTACAGTCTCCCCCAAGAGTAAATGCTGTGTCTGTCACTGGTGCACTTGGAGTTTTTaGCATGACTGCATTTTCATG | + |
|
Preference number: 5 (lower is better) Translates to: ALQLFTVSPKSKCCVCHWCTWSF*HDCIFM Trigger: CATGAAAATGCAGTCATGCAAAAAACTCCAAGTGCA...CCAGTGACAGACACAGCATTTACTCTTGGGGGAGACTGTAAAGAGCTGAAGTGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000037484.15 ENSMUST00000164859.8 |
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| CDS-3UTR CAA 90 bp | AGTAGTGAGCACTTCAGCTCTTTACAGTCTCCCCCAAGAGTAAATGCTGTGTCTTGTGGGACTTTTGGGTaGGACCCTTTCATAACATCT | + |
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Preference number: 5 (lower is better) Translates to: SSEHFSSLQSPPRVNAVSCGTFG*DPFITS Trigger: AGATGTTATGAAAGGGTCCAACCCAAAAGTCCCACA...AGACACAGCATTTACTCTTGGGGGAGACTGTAAAGAGCTGAAGTGCTCACTACT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000037484.15 ENSMUST00000164859.8 |
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| CDS-3UTR CAA 90 bp | CAGTCTCTGAGTAGTGAGCACTTCAGCTCTTTACAGTCTCCCCCAAGAGTAAATTCCTTCAGCAGCTTCTaGTCTTTACTCTGTGATTCC | + |
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Preference number: 5 (lower is better) Translates to: QSLSSEHFSSLQSPPRVNSFSSF*SLLCDS Trigger: GGAATCACAGAGTAAAGACAAGAAGCTGCTGAAGGA...ATTTACTCTTGGGGGAGACTGTAAAGAGCTGAAGTGCTCACTACTCAGAGACTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000037484.15 ENSMUST00000164859.8 |
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| CDS-3UTR CAA 90 bp | CAGAAGATACAGAAAAGAAATTCTTATGTGAAAGAAAGCCCGTGTTCACAGATGGGGTCAAACACTTCTTaGAGGCAGGGGACAGAGGAG | + |
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Preference number: 5 (lower is better) Translates to: QKIQKRNSYVKESPCSQMGSNTS*RQGTEE Trigger: CTCCTCTGTCCCCTGCCTCAAAGAAGTGTTTGACCC...CATCTGTGAACACGGGCTTTCTTTCACATAAGAATTTCTTTTCTGTATCTTCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000037484.15 |
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| CDS-3UTR CAA 90 bp | TTATCACCCCAGTCTCTGAGTAGTGAGCACTTCAGCTCTTTACAGTCTCCCCCATTTCTTTTCCACATTTaGGGCAATATTCACGCTGTT | + |
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Preference number: 5 (lower is better) Translates to: LSPQSLSSEHFSSLQSPPFLFHI*GNIHAV Trigger: AACAGCGTGAATATTGCCCAAAATGTGGAAAAGAAA...TGGGGGAGACTGTAAAGAGCTGAAGTGCTCACTACTCAGAGACTGGGGTGATAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000037484.15 ENSMUST00000164859.8 |
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| CDS-3UTR CAA 90 bp | TTATCACCCCAGTCTCTGAGTAGTGAGCACTTCAGCTCTTTACAGTCTCCCCCAAACAATACCACAACTTaGGCATTTGGTCTGATTTTC | + |
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Preference number: 5 (lower is better) Translates to: LSPQSLSSEHFSSLQSPPNNTTT*AFGLIF Trigger: GAAAATCAGACCAAATGCCAAAGTTGTGGTATTGTT...TGGGGGAGACTGTAAAGAGCTGAAGTGCTCACTACTCAGAGACTGGGGTGATAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000037484.15 ENSMUST00000164859.8 |
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| CDS-3UTR CAA 90 bp | CACACTCCTTTGGAACTCACTTATGACATTTTTACAGGCTTTATCACCCCAGTCGGTAAACTGCTGGTATaGCCTGGAGAAACACTACTG | + |
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Preference number: 5 (lower is better) Translates to: HTPLELTYDIFTGFITPVGKLLV*PGETLL Trigger: CAGTAGTGTTTCTCCAGGCAATACCAGCAGTTTACC...GACTGGGGTGATAAAGCCTGTAAAAATGTCATAAGTGAGTTCCAAAGGAGTGTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000037484.15 ENSMUST00000164859.8 |
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| CDS-3UTR CAA 90 bp | CAGGCTTTATCACCCCAGTCTCTGAGTAGTGAGCACTTCAGCTCTTTACAGTCTGCAACAAGTCTGCTATaGGCTTCGTCAAAAAGAATT | + |
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Preference number: 5 (lower is better) Translates to: QALSPQSLSSEHFSSLQSATSLL*ASSKRI Trigger: AATTCTTTTTGACGAAGCCAATAGCAGACTTGTTGC...AGACTGTAAAGAGCTGAAGTGCTCACTACTCAGAGACTGGGGTGATAAAGCCTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000037484.15 ENSMUST00000164859.8 |
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| CDS-3UTR CAA 90 bp | CAGTCTCTGAGTAGTGAGCACTTCAGCTCTTTACAGTCTCCCCCAAGAGTAAATTCTCCCATGCCGTTTTaGTTGTATCGACAGATTAGT | + |
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Preference number: 5 (lower is better) Translates to: QSLSSEHFSSLQSPPRVNSPMPF*LYRQIS Trigger: ACTAATCTGTCGATACAACAAAAACGGCATGGGAGA...ATTTACTCTTGGGGGAGACTGTAAAGAGCTGAAGTGCTCACTACTCAGAGACTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000037484.15 ENSMUST00000164859.8 |
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| CDS-3UTR CAA 90 bp | AGAAAGCCCGTGTTCACAGATGAAAACTGTTCCTTAACTAGTTCTGTCATCCAGATTCAAAGTTACGGCTaGTCGGCAATTTCTTTGCAA | + |
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Preference number: 5 (lower is better) Translates to: RKPVFTDENCSLTSSVIQIQSYG*SAISLQ Trigger: TTGCAAAGAAATTGCCGACAAGCCGTAACTTTGAAT...CTGGATGACAGAACTAGTTAAGGAACAGTTTTCATCTGTGAACACGGGCTTTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037484.15 |
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| CDS-3UTR CAA 90 bp | CAGAAGATACAGAAAAGAAATTCTTATGTGAAAGAAAGCCCGTGTTCACAGATGACTGAAGTTGTTCTGTaGTGGGACTTTTGGGTTGGA | + |
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Preference number: 5 (lower is better) Translates to: QKIQKRNSYVKESPCSQMTEVVL*WDFWVG Trigger: TCCAACCCAAAAGTCCCACAACAGAACAACTTCAGT...CATCTGTGAACACGGGCTTTCTTTCACATAAGAATTTCTTTTCTGTATCTTCTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037484.15 |
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| CDS-3UTR CAA 90 bp | CAGAAGATACAGAAAAGAAATTCTTATGTGAAAGAAAGCCCGTGTTCACAGATGTCTCCCATGCCGTTTTaGTTGTATCGACAGATTAGT | + |
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Preference number: 5 (lower is better) Translates to: QKIQKRNSYVKESPCSQMSPMPF*LYRQIS Trigger: ACTAATCTGTCGATACAACAAAAACGGCATGGGAGA...CATCTGTGAACACGGGCTTTCTTTCACATAAGAATTTCTTTTCTGTATCTTCTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037484.15 |
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| CDS TCA 72 bp | TTTCCTCTGAGCCGCTGTTCTGATGCCTGGCGTCTGTaGGTGAGCATGATGGAAGCGCCTCCCATGAACCAC | + |
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Preference number: 6 (lower is better) Translates to: FPLSRCSDAWRL*VSMMEAPPMNH Trigger: GTGGTTCATGGGAGGCGCTTCCATCATGCTCACTCACAGACGCCAGGCATCAGAACAGCGGCTCAGAGGAAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037484.15 |
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| CDS TCA 72 bp | CATAAGGTGGGTATTCTTTCCTCTGAGCCGCTGTTCTaGTGCCTGGCGTCTGTGAGTGAGCATGATGGAAGC | + |
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Preference number: 6 (lower is better) Translates to: HKVGILSSEPLF*CLASVSEHDGS Trigger: GCTTCCATCATGCTCACTCACAGACGCCAGGCATCAGAACAGCGGCTCAGAGGAAAGAATACCCACCTTATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037484.15 |
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| CDS CCA 72 bp | CATTACAGGGCTGTTTTCAGCTTTGTGGACATAAGGTaGGTATTCTTTCCTCTGAGCCGCTGTTCTGATGCC | + |
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Preference number: 6 (lower is better) Translates to: HYRAVFSFVDIR*VFFPLSRCSDA Trigger: GGCATCAGAACAGCGGCTCAGAGGAAAGAATACCCACCTTATGTCCACAAAGCTGAAAACAGCCCTGTAATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037484.15 |
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| CDS TCA 72 bp | TCATCATCACTAGACAAAATGACTCCACCTTGGCCATaGCTTAGCATTACAGGGCTGTTTTCAGCTTTGTGG | + |
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Preference number: 6 (lower is better) Translates to: SSSLDKMTPPWP*LSITGLFSALW Trigger: CCACAAAGCTGAAAACAGCCCTGTAATGCTAAGTCATGGCCAAGGTGGAGTCATTTTGTCTAGTGATGATGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000176360.8 |
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