Pregenerated sensors for SENP3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000005204Ensembl transcript IDs: ENSMUST00000005336.9, ENSMUST00000066760.8, ENSMUST00000134942.2
Found 130 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR GCA 90 bp | GCAGGCAGTAATCCCTTTGCGCGTCCACCACCCCCACACTGTTTTCCTGCCCTCAGGGAGAAAGAGGCTTaGTTTTATGTGGCCATTCCC | + |
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Preference number: 2 (lower is better) Translates to: AGSNPFARPPPPHCFPALREKEA*FYVAIP Trigger: GGGAATGGCCACATAAAAGCAAGCCTCTTTCTCCCT...GAGGGCAGGAAAACAGTGTGGGGGTGGTGGACGCGCAAAGGGATTACTGCCTGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000005336.9 ENSMUST00000066760.8 |
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| 3UTR-3UTR CCA 90 bp | GAAGATCGGGCAGGCAGTAATCCCTTTGCGCGTCCACCACCCCCACACTGTTTTAGGCTTGCTTTTATGTaGCCATTCCCTTCCCATCAG | + |
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Preference number: 2 (lower is better) Translates to: EDRAGSNPFARPPPPHCFRLAFM*PFPSHQ Trigger: CTGATGGGAAGGGAATGGCCACATAAAAGCAAGCCT...AAAACAGTGTGGGGGTGGTGGACGCGCAAAGGGATTACTGCCTGCCCGATCTTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000005336.9 ENSMUST00000066760.8 |
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| 3UTR TCA 72 bp | GCGCGTCCACCACCCCCACACTGTTTTCCTGCCCTCTaGACATGGAAGGAGGAATGGCTGCTCCACCTAGGC | + |
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Preference number: 3 (lower is better) Translates to: ARPPPPHCFPAL*TWKEEWLLHLG Trigger: GCCTAGGTGGAGCAGCCATTCCTCCTTCCATGTTCAGAGGGCAGGAAAACAGTGTGGGGGTGGTGGACGCGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000005336.9 ENSMUST00000066760.8 |
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| 3UTR GCA 72 bp | TCCCTTTGCGCGTCCACCACCCCCACACTGTTTTCCTaGCCTCTGAACATGGAAGGAGGAATGGCTGCTCCA | + |
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Preference number: 3 (lower is better) Translates to: SLCASTTPTLFS*PLNMEGGMAAP Trigger: TGGAGCAGCCATTCCTCCTTCCATGTTCAGAGGGCAGGAAAACAGTGTGGGGGTGGTGGACGCGCAAAGGGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000005336.9 ENSMUST00000066760.8 |
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| 3UTR-3UTR CAA 90 bp | GATCGGGCAGGCAGTAATCCCTTTGCGCGTCCACCACCCCCACACTGTTTTCCTGAGGGAGAAAGAGGCTaGCTTTTATGTGGCCATTCC | + |
|
Preference number: 3 (lower is better) Translates to: DRAGSNPFARPPPPHCFPEGERG*LLCGHS Trigger: GGAATGGCCACATAAAAGCAAGCCTCTTTCTCCCTC...AGGAAAACAGTGTGGGGGTGGTGGACGCGCAAAGGGATTACTGCCTGCCCGATC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000005336.9 ENSMUST00000066760.8 |
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| 3UTR-3UTR CAA 90 bp | CAGGCAGTAATCCCTTTGCGCGTCCACCACCCCCACACTGTTTTCCTGCCCTCTGAGGGAGAAAGAGGCTaGCTTTTATGTGGCCATTCC | + |
|
Preference number: 3 (lower is better) Translates to: QAVIPLRVHHPHTVFLPSEGERG*LLCGHS Trigger: GGAATGGCCACATAAAAGCAAGCCTCTTTCTCCCTC...AGAGGGCAGGAAAACAGTGTGGGGGTGGTGGACGCGCAAAGGGATTACTGCCTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000005336.9 ENSMUST00000066760.8 |
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| CDS-3UTR CCA 90 bp | CGGGCAGGCAGTAATCCCTTTGCGCGTCCACCACCCCCACACTGTTTTCCTGCCCGCCGCCGGCCTCGGTaGCGCCCCCAAAGCTTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: RAGSNPFARPPPPHCFPARRRPR*RPQSFQ Trigger: CTGGAAGCTTTGGGGGCGCCACCGAGGCCGGCGGCG...GGCAGGAAAACAGTGTGGGGGTGGTGGACGCGCAAAGGGATTACTGCCTGCCCG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000005336.9 ENSMUST00000066760.8 |
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| CDS-3UTR GCA 90 bp | GAAGGGTCTCCCTTTCCCCTGCCCACTGATGGGCTAAGGGTCTGGGGTATGAGGAGATGGTTCTTGGGGTaGGCGAGGTTCCGCCGCCGG | + |
|
Preference number: 4 (lower is better) Translates to: EGSPFPLPTDGLRVWGMRRWFLG*ARFRRR Trigger: CCGGCGGCGGAACCTCGCGCACCCCAAGAACCATCT...CCTCATACCCCAGACCCTTAGCCCATCAGTGGGCAGGGGAAAGGGAGACCCTTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000005336.9 ENSMUST00000066760.8 |
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| CDS-3UTR GCA 90 bp | TCCCTTTGCGCGTCCACCACCCCCACACTGTTTTCCTGCCCTCTGAACATGGAAGCTGGCATCAGGGGGTaGCAGGCTGCGCTCCCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: SLCASTTPTLFSCPLNMEAGIRG*QAALPF Trigger: GAAGGGGAGCGCAGCCTGGCACCCCCTGATGCCAGC...TTCCATGTTCAGAGGGCAGGAAAACAGTGTGGGGGTGGTGGACGCGCAAAGGGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000005336.9 ENSMUST00000066760.8 |
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| CDS-3UTR CCA 90 bp | CGGGCAGGCAGTAATCCCTTTGCGCGTCCACCACCCCCACACTGTTTTCCTGCCAGGGAGGCGTCTAGTTaGCACTGTGGTCCCAGACCC | + |
|
Preference number: 4 (lower is better) Translates to: RAGSNPFARPPPPHCFPAREASS*HCGPRP Trigger: GGGTCTGGGACCACAGTGCCAACTAGACGCCTCCCT...GGCAGGAAAACAGTGTGGGGGTGGTGGACGCGCAAAGGGATTACTGCCTGCCCG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000005336.9 ENSMUST00000066760.8 |
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| CDS-3UTR CCA 90 bp | GATCGGGCAGGCAGTAATCCCTTTGCGCGTCCACCACCCCCACACTGTTTTCCTTCTGGAAGGCTCTCATaGCTCGGCGCCGGCGCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: DRAGSNPFARPPPPHCFPSGRLS*LGAGAV Trigger: CACAGCGCCGGCGCCGAGCCATGAGAGCCTTCCAGA...AGGAAAACAGTGTGGGGGTGGTGGACGCGCAAAGGGATTACTGCCTGCCCGATC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000005336.9 ENSMUST00000066760.8 |
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| CDS-3UTR TCA 90 bp | CGGGCAGGCAGTAATCCCTTTGCGCGTCCACCACCCCCACACTGTTTTCCTGCCTCGGCGCCGGCGCTGTaGGCAGGTTTTTCTATGAGA | + |
|
Preference number: 4 (lower is better) Translates to: RAGSNPFARPPPPHCFPASAPAL*AGFSMR Trigger: TCTCATAGAAAAACCTGCTCACAGCGCCGGCGCCGA...GGCAGGAAAACAGTGTGGGGGTGGTGGACGCGCAAAGGGATTACTGCCTGCCCG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000005336.9 ENSMUST00000066760.8 |
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| CDS-3UTR TCA 90 bp | CGGGCAGGCAGTAATCCCTTTGCGCGTCCACCACCCCCACACTGTTTTCCTGCCTCCCATCCTCTGCCATaGGAGCACCTAGCAGACCCA | + |
|
Preference number: 4 (lower is better) Translates to: RAGSNPFARPPPPHCFPASHPLP*EHLADP Trigger: TGGGTCTGCTAGGTGCTCTCATGGCAGAGGATGGGA...GGCAGGAAAACAGTGTGGGGGTGGTGGACGCGCAAAGGGATTACTGCCTGCCCG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000005336.9 ENSMUST00000066760.8 |
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| CDS-3UTR CCA 90 bp | GCAGGCAGTAATCCCTTTGCGCGTCCACCACCCCCACACTGTTTTCCTGCCCTCAGGGAGGCGTCTAGTTaGCACTGTGGTCCCAGACCC | + |
|
Preference number: 4 (lower is better) Translates to: AGSNPFARPPPPHCFPALREASS*HCGPRP Trigger: GGGTCTGGGACCACAGTGCCAACTAGACGCCTCCCT...GAGGGCAGGAAAACAGTGTGGGGGTGGTGGACGCGCAAAGGGATTACTGCCTGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000005336.9 ENSMUST00000066760.8 |
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| CDS-3UTR CCA 90 bp | GCAGGCAGTAATCCCTTTGCGCGTCCACCACCCCCACACTGTTTTCCTGCCCTCTCCTGGGGTGAGAGATaGTTCTTGGGGTGCGCGAGG | + |
|
Preference number: 4 (lower is better) Translates to: AGSNPFARPPPPHCFPALSWGER*FLGCAR Trigger: CCTCGCGCACCCCAAGAACCATCTCTCACCCCAGGA...GAGGGCAGGAAAACAGTGTGGGGGTGGTGGACGCGCAAAGGGATTACTGCCTGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000005336.9 ENSMUST00000066760.8 |
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| CDS-3UTR GCA 90 bp | CAGGCAGTAATCCCTTTGCGCGTCCACCACCCCCACACTGTTTTCCTGCCCTCTTCCCGAAGGGGGCTATaGTGGCCAGCTTTCTCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: QAVIPLRVHHPHTVFLPSSRRGL*WPAFSP Trigger: TGGGGAGAAAGCTGGCCAGCATAGCCCCCTTCGGGA...AGAGGGCAGGAAAACAGTGTGGGGGTGGTGGACGCGCAAAGGGATTACTGCCTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000005336.9 ENSMUST00000066760.8 |
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| CDS-3UTR CCA 90 bp | CAGGCAGTAATCCCTTTGCGCGTCCACCACCCCCACACTGTTTTCCTGCCCTCTGTGAGAGATGGTTCTTaGGGTGCGCGAGGTTCCGCC | + |
|
Preference number: 4 (lower is better) Translates to: QAVIPLRVHHPHTVFLPSVRDGS*GARGSA Trigger: GGCGGAACCTCGCGCACCCCAAGAACCATCTCTCAC...AGAGGGCAGGAAAACAGTGTGGGGGTGGTGGACGCGCAAAGGGATTACTGCCTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000005336.9 ENSMUST00000066760.8 |
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| CDS-3UTR CCA 90 bp | CGGGCAGGCAGTAATCCCTTTGCGCGTCCACCACCCCCACACTGTTTTCCTGCCGTTGCACCCCCTTCCTaGGGTGAGAGATGGTTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: RAGSNPFARPPPPHCFPAVAPPS*GERWFL Trigger: CAAGAACCATCTCTCACCCCAGGAAGGGGGTGCAAC...GGCAGGAAAACAGTGTGGGGGTGGTGGACGCGCAAAGGGATTACTGCCTGCCCG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000005336.9 ENSMUST00000066760.8 |
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| CDS-3UTR CCA 90 bp | GATCGGGCAGGCAGTAATCCCTTTGCGCGTCCACCACCCCCACACTGTTTTCCTCCCAGAGGGCACTGGTaGAGACCCTCTCATCCCATC | + |
|
Preference number: 4 (lower is better) Translates to: DRAGSNPFARPPPPHCFPPRGHW*RPSHPI Trigger: GATGGGATGAGAGGGTCTCCACCAGTGCCCTCTGGG...AGGAAAACAGTGTGGGGGTGGTGGACGCGCAAAGGGATTACTGCCTGCCCGATC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000005336.9 ENSMUST00000066760.8 |
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| CDS-3UTR TCA 90 bp | CAGGCAGTAATCCCTTTGCGCGTCCACCACCCCCACACTGTTTTCCTGCCCTCTAAAACGACAGCAGGGTaGTGGCACCTGTGGCGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: QAVIPLRVHHPHTVFLPSKTTAG*WHLWRC Trigger: GCAACGCCACAGGTGCCATCACCCTGCTGTCGTTTT...AGAGGGCAGGAAAACAGTGTGGGGGTGGTGGACGCGCAAAGGGATTACTGCCTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000005336.9 ENSMUST00000066760.8 |
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| CDS-3UTR GCA 90 bp | GAAGATCGGGCAGGCAGTAATCCCTTTGCGCGTCCACCACCCCCACACTGTTTTTCCCGAAGGGGGCTATaGTGGCCAGCTTTCTCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: EDRAGSNPFARPPPPHCFSRRGL*WPAFSP Trigger: TGGGGAGAAAGCTGGCCAGCATAGCCCCCTTCGGGA...AAAACAGTGTGGGGGTGGTGGACGCGCAAAGGGATTACTGCCTGCCCGATCTTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt. Matches the following 2 transcripts: ENSMUST00000005336.9 ENSMUST00000066760.8 |
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| CDS-3UTR GCA 90 bp | GAAGGGTCTCCCTTTCCCCTGCCCACTGATGGGCTAAGGGTCTGGGGTATGAGGGAGATAAGGGACCAGTaGACCTCCAGATGGATGGGG | + |
|
Preference number: 4 (lower is better) Translates to: EGSPFPLPTDGLRVWGMREIRDQ*TSRWMG Trigger: CCCCATCCATCTGGAGGTGCACTGGTCCCTTATCTC...CCTCATACCCCAGACCCTTAGCCCATCAGTGGGCAGGGGAAAGGGAGACCCTTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000005336.9 ENSMUST00000066760.8 ENSMUST00000134942.2 |
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| CDS-3UTR GCA 90 bp | CGGGCAGGCAGTAATCCCTTTGCGCGTCCACCACCCCCACACTGTTTTCCTGCCAGTTTGGGCATGTCCTaGTGGGTGAAGCTGAATGGC | + |
|
Preference number: 4 (lower is better) Translates to: RAGSNPFARPPPPHCFPASLGMS*WVKLNG Trigger: GCCATTCAGCTTCACCCAGCAGGACATGCCCAAACT...GGCAGGAAAACAGTGTGGGGGTGGTGGACGCGCAAAGGGATTACTGCCTGCCCG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000005336.9 ENSMUST00000066760.8 |
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| CDS-3UTR CCA 90 bp | CGGGCAGGCAGTAATCCCTTTGCGCGTCCACCACCCCCACACTGTTTTCCTGCCCCCCAAAGCTTCCAGTaGAATGTCAGCGAGGTGCTT | + |
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Preference number: 4 (lower is better) Translates to: RAGSNPFARPPPPHCFPAPQSFQ*NVSEVL Trigger: AAGCACCTCGCTGACATTCCACTGGAAGCTTTGGGG...GGCAGGAAAACAGTGTGGGGGTGGTGGACGCGCAAAGGGATTACTGCCTGCCCG 59% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt. Matches the following 2 transcripts: ENSMUST00000005336.9 ENSMUST00000066760.8 |
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| CDS-3UTR CCA 90 bp | TCCCTTTGCGCGTCCACCACCCCCACACTGTTTTCCTGCCCTCTGAACATGGAAGTGAGAGATGGTTCTTaGGGTGCGCGAGGTTCCGCC | + |
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Preference number: 4 (lower is better) Translates to: SLCASTTPTLFSCPLNMEVRDGS*GARGSA Trigger: GGCGGAACCTCGCGCACCCCAAGAACCATCTCTCAC...TTCCATGTTCAGAGGGCAGGAAAACAGTGTGGGGGTGGTGGACGCGCAAAGGGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000005336.9 ENSMUST00000066760.8 |
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| CDS-3UTR CCA 90 bp | TCCCTTTGCGCGTCCACCACCCCCACACTGTTTTCCTGCCCTCTGAACATGGAACCCAGAGGGCACTGGTaGAGACCCTCTCATCCCATC | + |
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Preference number: 4 (lower is better) Translates to: SLCASTTPTLFSCPLNMEPRGHW*RPSHPI Trigger: GATGGGATGAGAGGGTCTCCACCAGTGCCCTCTGGG...TTCCATGTTCAGAGGGCAGGAAAACAGTGTGGGGGTGGTGGACGCGCAAAGGGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000005336.9 ENSMUST00000066760.8 |
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| CDS-3UTR TCA 90 bp | TCCCTTTGCGCGTCCACCACCCCCACACTGTTTTCCTGCCCTCTGAACATGGAAAAAACGACAGCAGGGTaGTGGCACCTGTGGCGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: SLCASTTPTLFSCPLNMEKTTAG*WHLWRC Trigger: GCAACGCCACAGGTGCCATCACCCTGCTGTCGTTTT...TTCCATGTTCAGAGGGCAGGAAAACAGTGTGGGGGTGGTGGACGCGCAAAGGGA 58% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt. Matches the following 2 transcripts: ENSMUST00000005336.9 ENSMUST00000066760.8 |
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| CDS-3UTR GCA 90 bp | GAAGGGTCTCCCTTTCCCCTGCCCACTGATGGGCTAAGGGTCTGGGGTATGAGGAGTTTGGGCATGTCCTaGTGGGTGAAGCTGAATGGC | + |
|
Preference number: 4 (lower is better) Translates to: EGSPFPLPTDGLRVWGMRSLGMS*WVKLNG Trigger: GCCATTCAGCTTCACCCAGCAGGACATGCCCAAACT...CCTCATACCCCAGACCCTTAGCCCATCAGTGGGCAGGGGAAAGGGAGACCCTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000005336.9 ENSMUST00000066760.8 ENSMUST00000134942.2 |
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| CDS-3UTR CCA 90 bp | CAGGCAGTAATCCCTTTGCGCGTCCACCACCCCCACACTGTTTTCCTGCCCTCTGTTGCACCCCCTTCCTaGGGTGAGAGATGGTTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: QAVIPLRVHHPHTVFLPSVAPPS*GERWFL Trigger: CAAGAACCATCTCTCACCCCAGGAAGGGGGTGCAAC...AGAGGGCAGGAAAACAGTGTGGGGGTGGTGGACGCGCAAAGGGATTACTGCCTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000005336.9 ENSMUST00000066760.8 |
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| CDS-3UTR TCA 90 bp | CAGGCAGTAATCCCTTTGCGCGTCCACCACCCCCACACTGTTTTCCTGCCCTCTCCAAGTCATCCATGGTaGGCACGTGTCGCTTATAGG | + |
|
Preference number: 4 (lower is better) Translates to: QAVIPLRVHHPHTVFLPSPSHPW*ARVAYR Trigger: CCTATAAGCGACACGTGCTCACCATGGATGACTTGG...AGAGGGCAGGAAAACAGTGTGGGGGTGGTGGACGCGCAAAGGGATTACTGCCTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000005336.9 ENSMUST00000066760.8 |
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| CDS-3UTR TCA 90 bp | GAAGGGTCTCCCTTTCCCCTGCCCACTGATGGGCTAAGGGTCTGGGGTATGAGGCAGGGACTGTGTCCATaGCCAGATCTCCATACATGT | + |
|
Preference number: 4 (lower is better) Translates to: EGSPFPLPTDGLRVWGMRQGLCP*PDLHTC Trigger: ACATGTATGGAGATCTGGTCATGGACACAGTCCCTG...CCTCATACCCCAGACCCTTAGCCCATCAGTGGGCAGGGGAAAGGGAGACCCTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000005336.9 ENSMUST00000066760.8 |
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| CDS-3UTR CCA 90 bp | GATCGGGCAGGCAGTAATCCCTTTGCGCGTCCACCACCCCCACACTGTTTTCCTCCCCAAAGCTTCCAGTaGAATGTCAGCGAGGTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: DRAGSNPFARPPPPHCFPPQSFQ*NVSEVL Trigger: AAGCACCTCGCTGACATTCCACTGGAAGCTTTGGGG...AGGAAAACAGTGTGGGGGTGGTGGACGCGCAAAGGGATTACTGCCTGCCCGATC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000005336.9 ENSMUST00000066760.8 |
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| CDS-3UTR TCA 90 bp | CAGGCAGTAATCCCTTTGCGCGTCCACCACCCCCACACTGTTTTCCTGCCCTCTCTCTTCTTCACTAGCTaGGGCATCAAAAGATGGCCG | + |
|
Preference number: 4 (lower is better) Translates to: QAVIPLRVHHPHTVFLPSLFFTS*GIKRWP Trigger: CGGCCATCTTTTGATGCCTCAGCTAGTGAAGAAGAG...AGAGGGCAGGAAAACAGTGTGGGGGTGGTGGACGCGCAAAGGGATTACTGCCTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000005336.9 ENSMUST00000066760.8 |
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| CDS-3UTR TCA 90 bp | GAAGATCGGGCAGGCAGTAATCCCTTTGCGCGTCCACCACCCCCACACTGTTTTCCAAGTCATCCATGGTaGGCACGTGTCGCTTATAGG | + |
|
Preference number: 4 (lower is better) Translates to: EDRAGSNPFARPPPPHCFPSHPW*ARVAYR Trigger: CCTATAAGCGACACGTGCTCACCATGGATGACTTGG...AAAACAGTGTGGGGGTGGTGGACGCGCAAAGGGATTACTGCCTGCCCGATCTTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000005336.9 ENSMUST00000066760.8 |
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| CDS-3UTR TCA 90 bp | CGGGCAGGCAGTAATCCCTTTGCGCGTCCACCACCCCCACACTGTTTTCCTGCCTGGCCACATTCATTTTaGAGTAACCTTTCCAGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: RAGSNPFARPPPPHCFPAWPHSF*SNLSSP Trigger: AGGGCTGGAAAGGTTACTTCAAAATGAATGTGGCCA...GGCAGGAAAACAGTGTGGGGGTGGTGGACGCGCAAAGGGATTACTGCCTGCCCG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000005336.9 ENSMUST00000066760.8 |
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| CDS-3UTR GCA 90 bp | GAAGATCGGGCAGGCAGTAATCCCTTTGCGCGTCCACCACCCCCACACTGTTTTCCGATCTGCCTCTTCTaGAATGCCCAAGTCAGAGCT | + |
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Preference number: 4 (lower is better) Translates to: EDRAGSNPFARPPPPHCFPICLF*NAQVRA Trigger: AGCTCTGACTTGGGCATTGCAGAAGAGGCAGATCGG...AAAACAGTGTGGGGGTGGTGGACGCGCAAAGGGATTACTGCCTGCCCGATCTTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000005336.9 ENSMUST00000066760.8 |
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| CDS-3UTR GCA 90 bp | TCCCTTTGCGCGTCCACCACCCCCACACTGTTTTCCTGCCCTCTGAACATGGAACCGATCTGCCTCTTCTaGAATGCCCAAGTCAGAGCT | + |
|
Preference number: 4 (lower is better) Translates to: SLCASTTPTLFSCPLNMEPICLF*NAQVRA Trigger: AGCTCTGACTTGGGCATTGCAGAAGAGGCAGATCGG...TTCCATGTTCAGAGGGCAGGAAAACAGTGTGGGGGTGGTGGACGCGCAAAGGGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000005336.9 ENSMUST00000066760.8 |
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| CDS-3UTR GCA 90 bp | GAAGGGTCTCCCTTTCCCCTGCCCACTGATGGGCTAAGGGTCTGGGGTATGAGGGGTGTAGAGAACTCCTaGTGGAAAATGTCCTCCAAC | + |
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Preference number: 4 (lower is better) Translates to: EGSPFPLPTDGLRVWGMRGVENS*WKMSSN Trigger: GTTGGAGGACATTTTCCAGCAGGAGTTCTCTACACC...CCTCATACCCCAGACCCTTAGCCCATCAGTGGGCAGGGGAAAGGGAGACCCTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000005336.9 ENSMUST00000066760.8 ENSMUST00000134942.2 |
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| CDS-3UTR GCA 90 bp | GAAGGGTCTCCCTTTCCCCTGCCCACTGATGGGCTAAGGGTCTGGGGTATGAGGACAGGGCCAGGTGCTTaGAGTACTGTAATACAAAGG | + |
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Preference number: 4 (lower is better) Translates to: EGSPFPLPTDGLRVWGMRTGPGA*STVIQR Trigger: CCTTTGTATTACAGTACTGCAAGCACCTGGCCCTGT...CCTCATACCCCAGACCCTTAGCCCATCAGTGGGCAGGGGAAAGGGAGACCCTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000005336.9 ENSMUST00000066760.8 ENSMUST00000134942.2 |
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| CDS-3UTR CCA 90 bp | GAAGGGTCTCCCTTTCCCCTGCCCACTGATGGGCTAAGGGTCTGGGGTATGAGGGCACCTCCAGATGGATaGGGATTAGCAGTAATTCCT | + |
|
Preference number: 4 (lower is better) Translates to: EGSPFPLPTDGLRVWGMRAPPDG*GLAVIP Trigger: AGGAATTACTGCTAATCCCCATCCATCTGGAGGTGC...CCTCATACCCCAGACCCTTAGCCCATCAGTGGGCAGGGGAAAGGGAGACCCTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000005336.9 ENSMUST00000066760.8 ENSMUST00000134942.2 |
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| CDS-3UTR CCA 90 bp | GAAGGGTCTCCCTTTCCCCTGCCCACTGATGGGCTAAGGGTCTGGGGTATGAGGCAGTGCACCTCCAGATaGATGGGGATTAGCAGTAAT | + |
|
Preference number: 4 (lower is better) Translates to: EGSPFPLPTDGLRVWGMRQCTSR*MGISSN Trigger: ATTACTGCTAATCCCCATCCATCTGGAGGTGCACTG...CCTCATACCCCAGACCCTTAGCCCATCAGTGGGCAGGGGAAAGGGAGACCCTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000005336.9 ENSMUST00000066760.8 ENSMUST00000134942.2 |
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| CDS-3UTR GCA 90 bp | ATAGAGGGAGAAAGAGGCTTGCTTTTATGTGGCCATTCCCTTCCCATCAGAAATGCTGGCATCAGGGGGTaGCAGGCTGCGCTCCCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: IEGERGLLLCGHSLPIRNAGIRG*QAALPF Trigger: GAAGGGGAGCGCAGCCTGGCACCCCCTGATGCCAGC...ATTTCTGATGGGAAGGGAATGGCCACATAAAAGCAAGCCTCTTTCTCCCTCTAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000005336.9 ENSMUST00000066760.8 |
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| CDS-3UTR GCA 90 bp | TCCCTTTGCGCGTCCACCACCCCCACACTGTTTTCCTGCCCTCTGAACATGGAACTGCCTCTTCTGCAATaGCCAAGTCAGAGCTCTGAA | + |
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Preference number: 4 (lower is better) Translates to: SLCASTTPTLFSCPLNMELPLLQ*PSQSSE Trigger: TTCAGAGCTCTGACTTGGGCATTGCAGAAGAGGCAG...TTCCATGTTCAGAGGGCAGGAAAACAGTGTGGGGGTGGTGGACGCGCAAAGGGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000005336.9 ENSMUST00000066760.8 |
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| CDS-3UTR CCA 90 bp | AAAGAGGCTTGCTTTTATGTGGCCATTCCCTTCCCATCAGAAATCAATATACTCCGCCGCCGGCCTCGGTaGCGCCCCCAAAGCTTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: KEACFYVAIPFPSEINILRRRPR*RPQSFQ Trigger: CTGGAAGCTTTGGGGGCGCCACCGAGGCCGGCGGCG...GAGTATATTGATTTCTGATGGGAAGGGAATGGCCACATAAAAGCAAGCCTCTTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000005336.9 ENSMUST00000066760.8 |
||
| CDS-3UTR CCA 90 bp | TGGGTAGAGAAACAAAAAGGAACTAGAGTTTCTTGGGAAGGGTCTCCCTTTCCCGGGCCCAGAGGGCACTaGTGGAGACCCTCTCATCCC | + |
|
Preference number: 4 (lower is better) Translates to: WVEKQKGTRVSWEGSPFPGPRGH*WRPSHP Trigger: GGGATGAGAGGGTCTCCACCAGTGCCCTCTGGGCCC...GGGAAAGGGAGACCCTTCCCAAGAAACTCTAGTTCCTTTTTGTTTCTCTACCCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000005336.9 ENSMUST00000066760.8 |
||
| CDS-3UTR CCA 90 bp | CGGGCAGGCAGTAATCCCTTTGCGCGTCCACCACCCCCACACTGTTTTCCTGCCTACATGTTCATCACCTaGTCATTGAGCCAGTTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: RAGSNPFARPPPPHCFPAYMFIT*SLSQFC Trigger: ACAGAACTGGCTCAATGACCAGGTGATGAACATGTA...GGCAGGAAAACAGTGTGGGGGTGGTGGACGCGCAAAGGGATTACTGCCTGCCCG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000005336.9 ENSMUST00000066760.8 |
||
| CDS-3UTR CCA 90 bp | GATCGGGCAGGCAGTAATCCCTTTGCGCGTCCACCACCCCCACACTGTTTTCCTGCACCTCCAGATGGATaGGGATTAGCAGTAATTCCT | + |
|
Preference number: 4 (lower is better) Translates to: DRAGSNPFARPPPPHCFPAPPDG*GLAVIP Trigger: AGGAATTACTGCTAATCCCCATCCATCTGGAGGTGC...AGGAAAACAGTGTGGGGGTGGTGGACGCGCAAAGGGATTACTGCCTGCCCGATC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000005336.9 ENSMUST00000066760.8 |
||
| CDS-3UTR TCA 90 bp | TCCCTTTGCGCGTCCACCACCCCCACACTGTTTTCCTGCCCTCTGAACATGGAAGGGAGTCAAAATAGGTaGTGGTACGTCGCCTTACAT | + |
|
Preference number: 4 (lower is better) Translates to: SLCASTTPTLFSCPLNMEGSQNR*WYVALH Trigger: ATGTAAGGCGACGTACCATCACCTATTTTGACTCCC...TTCCATGTTCAGAGGGCAGGAAAACAGTGTGGGGGTGGTGGACGCGCAAAGGGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000005336.9 ENSMUST00000066760.8 |
||
| CDS-3UTR TCA 90 bp | GAAGATCGGGCAGGCAGTAATCCCTTTGCGCGTCCACCACCCCCACACTGTTTTGGGAGTCAAAATAGGTaGTGGTACGTCGCCTTACAT | + |
|
Preference number: 4 (lower is better) Translates to: EDRAGSNPFARPPPPHCFGSQNR*WYVALH Trigger: ATGTAAGGCGACGTACCATCACCTATTTTGACTCCC...AAAACAGTGTGGGGGTGGTGGACGCGCAAAGGGATTACTGCCTGCCCGATCTTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000005336.9 ENSMUST00000066760.8 |
||
| CDS-3UTR GCA 90 bp | ATAGAGGGAGAAAGAGGCTTGCTTTTATGTGGCCATTCCCTTCCCATCAGAAATAGATGGTTCTTGGGGTaGGCGAGGTTCCGCCGCCGG | + |
|
Preference number: 4 (lower is better) Translates to: IEGERGLLLCGHSLPIRNRWFLG*ARFRRR Trigger: CCGGCGGCGGAACCTCGCGCACCCCAAGAACCATCT...ATTTCTGATGGGAAGGGAATGGCCACATAAAAGCAAGCCTCTTTCTCCCTCTAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000005336.9 ENSMUST00000066760.8 |
||
| CDS-3UTR GCA 90 bp | GAAGGGTCTCCCTTTCCCCTGCCCACTGATGGGCTAAGGGTCTGGGGTATGAGGAAGCTGTTGAAGAAATaGACCTTTTCAGGGACTGTG | + |
|
Preference number: 4 (lower is better) Translates to: EGSPFPLPTDGLRVWGMRKLLKK*TFSGTV Trigger: CACAGTCCCTGAAAAGGTGCATTTCTTCAACAGCTT...CCTCATACCCCAGACCCTTAGCCCATCAGTGGGCAGGGGAAAGGGAGACCCTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000005336.9 ENSMUST00000066760.8 |
||
| CDS-3UTR GCA 90 bp | CGGGCAGGCAGTAATCCCTTTGCGCGTCCACCACCCCCACACTGTTTTCCTGCCTCACTGTCATTATTCTaGCTGGCCACATTCATTTTG | + |
|
Preference number: 4 (lower is better) Translates to: RAGSNPFARPPPPHCFPASLSLF*LATFIL Trigger: CAAAATGAATGTGGCCAGGCAGAATAATGACAGTGA...GGCAGGAAAACAGTGTGGGGGTGGTGGACGCGCAAAGGGATTACTGCCTGCCCG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000005336.9 ENSMUST00000066760.8 |
||
| CDS-3UTR GCA 90 bp | GAAGATCGGGCAGGCAGTAATCCCTTTGCGCGTCCACCACCCCCACACTGTTTTACAGGGCCAGGTGCTTaGAGTACTGTAATACAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: EDRAGSNPFARPPPPHCFTGPGA*STVIQR Trigger: CCTTTGTATTACAGTACTGCAAGCACCTGGCCCTGT...AAAACAGTGTGGGGGTGGTGGACGCGCAAAGGGATTACTGCCTGCCCGATCTTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000005336.9 ENSMUST00000066760.8 |
||
| CDS-3UTR CCA 90 bp | TCCCTTTGCGCGTCCACCACCCCCACACTGTTTTCCTGCCCTCTGAACATGGAAGTCCCCCAAAACCATTaGGTAGAGTACATGAGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: SLCASTTPTLFSCPLNMEVPQNH*VEYMRG Trigger: TCCTCTCATGTACTCTACCCAATGGTTTTGGGGGAC...TTCCATGTTCAGAGGGCAGGAAAACAGTGTGGGGGTGGTGGACGCGCAAAGGGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000005336.9 ENSMUST00000066760.8 |
||
| CDS-3UTR CCA 90 bp | GCAGGCAGTAATCCCTTTGCGCGTCCACCACCCCCACACTGTTTTCCTGCCCTCTACATGTTCATCACCTaGTCATTGAGCCAGTTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: AGSNPFARPPPPHCFPALYMFIT*SLSQFC Trigger: ACAGAACTGGCTCAATGACCAGGTGATGAACATGTA...GAGGGCAGGAAAACAGTGTGGGGGTGGTGGACGCGCAAAGGGATTACTGCCTGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000005336.9 ENSMUST00000066760.8 |
||
| CDS-3UTR CCA 90 bp | GAAGGGTCTCCCTTTCCCCTGCCCACTGATGGGCTAAGGGTCTGGGGTATGAGGCCCCATCATAACCCTTaGTACGGAGTTTATCATAGA | + |
|
Preference number: 4 (lower is better) Translates to: EGSPFPLPTDGLRVWGMRPHHNP*YGVYHR Trigger: TCTATGATAAACTCCGTACCAAGGGTTATGATGGGG...CCTCATACCCCAGACCCTTAGCCCATCAGTGGGCAGGGGAAAGGGAGACCCTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000005336.9 ENSMUST00000066760.8 |
||
| CDS-3UTR GCA 90 bp | AAAGAGGCTTGCTTTTATGTGGCCATTCCCTTCCCATCAGAAATCAATATACTCCAGGGGGTGCCAGGCTaGGCTCCCCTTCAGGACCAG | + |
|
Preference number: 4 (lower is better) Translates to: KEACFYVAIPFPSEINILQGVPG*APLQDQ Trigger: CTGGTCCTGAAGGGGAGCGCAGCCTGGCACCCCCTG...GAGTATATTGATTTCTGATGGGAAGGGAATGGCCACATAAAAGCAAGCCTCTTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000005336.9 ENSMUST00000066760.8 |
||
| CDS-3UTR CCA 90 bp | TGGGTAGAGAAACAAAAAGGAACTAGAGTTTCTTGGGAAGGGTCTCCCTTTCCCCCCAGACCCAGGATCTaGCCCAAAACCACCACCGGA | + |
|
Preference number: 4 (lower is better) Translates to: WVEKQKGTRVSWEGSPFPPRPRI*PKTTTG Trigger: TCCGGTGGTGGTTTTGGGCCAGATCCTGGGTCTGGG...GGGAAAGGGAGACCCTTCCCAAGAAACTCTAGTTCCTTTTTGTTTCTCTACCCA 52% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt. Matches the following 2 transcripts: ENSMUST00000005336.9 ENSMUST00000066760.8 |
||
| CDS-3UTR CCA 90 bp | GATCGGGCAGGCAGTAATCCCTTTGCGCGTCCACCACCCCCACACTGTTTTCCTCCCCATCATAACCCTTaGTACGGAGTTTATCATAGA | + |
|
Preference number: 4 (lower is better) Translates to: DRAGSNPFARPPPPHCFPPHHNP*YGVYHR Trigger: TCTATGATAAACTCCGTACCAAGGGTTATGATGGGG...AGGAAAACAGTGTGGGGGTGGTGGACGCGCAAAGGGATTACTGCCTGCCCGATC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000005336.9 ENSMUST00000066760.8 |
||
| CDS-3UTR GCA 90 bp | TCCCTTTGCGCGTCCACCACCCCCACACTGTTTTCCTGCCCTCTGAACATGGAAAAGCTGTTGAAGAAATaGACCTTTTCAGGGACTGTG | + |
|
Preference number: 4 (lower is better) Translates to: SLCASTTPTLFSCPLNMEKLLKK*TFSGTV Trigger: CACAGTCCCTGAAAAGGTGCATTTCTTCAACAGCTT...TTCCATGTTCAGAGGGCAGGAAAACAGTGTGGGGGTGGTGGACGCGCAAAGGGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000005336.9 ENSMUST00000066760.8 |
||
| CDS-3UTR CCA 90 bp | ATAGAGGGAGAAAGAGGCTTGCTTTTATGTGGCCATTCCCTTCCCATCAGAAATTCCTGGGGTGAGAGATaGTTCTTGGGGTGCGCGAGG | + |
|
Preference number: 4 (lower is better) Translates to: IEGERGLLLCGHSLPIRNSWGER*FLGCAR Trigger: CCTCGCGCACCCCAAGAACCATCTCTCACCCCAGGA...ATTTCTGATGGGAAGGGAATGGCCACATAAAAGCAAGCCTCTTTCTCCCTCTAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000005336.9 ENSMUST00000066760.8 |
||
| CDS-3UTR CCA 90 bp | ATAGAGGGAGAAAGAGGCTTGCTTTTATGTGGCCATTCCCTTCCCATCAGAAATCGAAGGGGGCTATGCTaGCCAGCTTTCTCCCCAGTC | + |
|
Preference number: 4 (lower is better) Translates to: IEGERGLLLCGHSLPIRNRRGLC*PAFSPV Trigger: GACTGGGGAGAAAGCTGGCCAGCATAGCCCCCTTCG...ATTTCTGATGGGAAGGGAATGGCCACATAAAAGCAAGCCTCTTTCTCCCTCTAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000005336.9 ENSMUST00000066760.8 |
||
| CDS-3UTR CCA 90 bp | AGAGGCTTGCTTTTATGTGGCCATTCCCTTCCCATCAGAAATCAATATACTCGCCGAAGGGGGCTATGCTaGCCAGCTTTCTCCCCAGTC | + |
|
Preference number: 4 (lower is better) Translates to: RGLLLCGHSLPIRNQYTRRRGLC*PAFSPV Trigger: GACTGGGGAGAAAGCTGGCCAGCATAGCCCCCTTCG...GCGAGTATATTGATTTCTGATGGGAAGGGAATGGCCACATAAAAGCAAGCCTCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000005336.9 ENSMUST00000066760.8 |
||
| CDS-3UTR TCA 90 bp | AGAGGCTTGCTTTTATGTGGCCATTCCCTTCCCATCAGAAATCAATATACTCGCTCCCATCCTCTGCCATaGGAGCACCTAGCAGACCCA | + |
|
Preference number: 4 (lower is better) Translates to: RGLLLCGHSLPIRNQYTRSHPLP*EHLADP Trigger: TGGGTCTGCTAGGTGCTCTCATGGCAGAGGATGGGA...GCGAGTATATTGATTTCTGATGGGAAGGGAATGGCCACATAAAAGCAAGCCTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005336.9 ENSMUST00000066760.8 |
||
| CDS-3UTR GCA 90 bp | TCCCTTTGCGCGTCCACCACCCCCACACTGTTTTCCTGCCCTCTGAACATGGAATCACTGTCATTATTCTaGCTGGCCACATTCATTTTG | + |
|
Preference number: 4 (lower is better) Translates to: SLCASTTPTLFSCPLNMESLSLF*LATFIL Trigger: CAAAATGAATGTGGCCAGGCAGAATAATGACAGTGA...TTCCATGTTCAGAGGGCAGGAAAACAGTGTGGGGGTGGTGGACGCGCAAAGGGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000005336.9 ENSMUST00000066760.8 |
||
| CDS-3UTR TCA 90 bp | TGGGTAGAGAAACAAAAAGGAACTAGAGTTTCTTGGGAAGGGTCTCCCTTTCCCGAGCAGGTTTTTCTATaGGAGGGTCGGAGAGCTCGA | + |
|
Preference number: 4 (lower is better) Translates to: WVEKQKGTRVSWEGSPFPEQVFL*EGRRAR Trigger: TCGAGCTCTCCGACCCTCTCATAGAAAAACCTGCTC...GGGAAAGGGAGACCCTTCCCAAGAAACTCTAGTTCCTTTTTGTTTCTCTACCCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000005336.9 ENSMUST00000066760.8 |
||
| CDS-3UTR GCA 90 bp | ATAGAGGGAGAAAGAGGCTTGCTTTTATGTGGCCATTCCCTTCCCATCAGAAATCTCCCCAGTCCGATCTaGCTCTTCTGCAATGCCCAA | + |
|
Preference number: 4 (lower is better) Translates to: IEGERGLLLCGHSLPIRNLPSPI*LFCNAQ Trigger: TTGGGCATTGCAGAAGAGGCAGATCGGACTGGGGAG...ATTTCTGATGGGAAGGGAATGGCCACATAAAAGCAAGCCTCTTTCTCCCTCTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000005336.9 ENSMUST00000066760.8 |
||
| CDS-3UTR GCA 90 bp | AGAGGCTTGCTTTTATGTGGCCATTCCCTTCCCATCAGAAATCAATATACTCGCCTCCCCAGTCCGATCTaGCTCTTCTGCAATGCCCAA | + |
|
Preference number: 4 (lower is better) Translates to: RGLLLCGHSLPIRNQYTRLPSPI*LFCNAQ Trigger: TTGGGCATTGCAGAAGAGGCAGATCGGACTGGGGAG...GCGAGTATATTGATTTCTGATGGGAAGGGAATGGCCACATAAAAGCAAGCCTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000005336.9 ENSMUST00000066760.8 |
||
| CDS-3UTR CCA 90 bp | AAAGAGGCTTGCTTTTATGTGGCCATTCCCTTCCCATCAGAAATCAATATACTCCCCAGACCCAGGATCTaGCCCAAAACCACCACCGGA | + |
|
Preference number: 4 (lower is better) Translates to: KEACFYVAIPFPSEINILPRPRI*PKTTTG Trigger: TCCGGTGGTGGTTTTGGGCCAGATCCTGGGTCTGGG...GAGTATATTGATTTCTGATGGGAAGGGAATGGCCACATAAAAGCAAGCCTCTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000005336.9 ENSMUST00000066760.8 |
||
| CDS-3UTR TCA 90 bp | AGAGGCTTGCTTTTATGTGGCCATTCCCTTCCCATCAGAAATCAATATACTCGCGAGCAGGTTTTTCTATaGGAGGGTCGGAGAGCTCGA | + |
|
Preference number: 4 (lower is better) Translates to: RGLLLCGHSLPIRNQYTREQVFL*EGRRAR Trigger: TCGAGCTCTCCGACCCTCTCATAGAAAAACCTGCTC...GCGAGTATATTGATTTCTGATGGGAAGGGAATGGCCACATAAAAGCAAGCCTCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000005336.9 ENSMUST00000066760.8 |
||
| CDS-3UTR TCA 90 bp | AGAGGCTTGCTTTTATGTGGCCATTCCCTTCCCATCAGAAATCAATATACTCGCCTCTTCTTCACTAGCTaGGGCATCAAAAGATGGCCG | + |
|
Preference number: 4 (lower is better) Translates to: RGLLLCGHSLPIRNQYTRLFFTS*GIKRWP Trigger: CGGCCATCTTTTGATGCCTCAGCTAGTGAAGAAGAG...GCGAGTATATTGATTTCTGATGGGAAGGGAATGGCCACATAAAAGCAAGCCTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000005336.9 ENSMUST00000066760.8 |
||
| CDS-3UTR TCA 90 bp | TGGGTAGAGAAACAAAAAGGAACTAGAGTTTCTTGGGAAGGGTCTCCCTTTCCCGGGAGTCAAAATAGGTaGTGGTACGTCGCCTTACAT | + |
|
Preference number: 4 (lower is better) Translates to: WVEKQKGTRVSWEGSPFPGSQNR*WYVALH Trigger: ATGTAAGGCGACGTACCATCACCTATTTTGACTCCC...GGGAAAGGGAGACCCTTCCCAAGAAACTCTAGTTCCTTTTTGTTTCTCTACCCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000005336.9 ENSMUST00000066760.8 ENSMUST00000134942.2 |
||
| CDS-3UTR GCA 90 bp | TGGGTAGAGAAACAAAAAGGAACTAGAGTTTCTTGGGAAGGGTCTCCCTTTCCCGGAATGTCAGCGAGGTaGTTTTTGAGTAGAGCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: WVEKQKGTRVSWEGSPFPGMSAR*FLSRAA Trigger: TGCTGCTCTACTCAAAAAGCACCTCGCTGACATTCC...GGGAAAGGGAGACCCTTCCCAAGAAACTCTAGTTCCTTTTTGTTTCTCTACCCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000005336.9 ENSMUST00000066760.8 |
||
| CDS-3UTR GCA 90 bp | AGAGGCTTGCTTTTATGTGGCCATTCCCTTCCCATCAGAAATCAATATACTCGCCTGCCTCTTCTGCAATaGCCAAGTCAGAGCTCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: RGLLLCGHSLPIRNQYTRLPLLQ*PSQSSE Trigger: TTCAGAGCTCTGACTTGGGCATTGCAGAAGAGGCAG...GCGAGTATATTGATTTCTGATGGGAAGGGAATGGCCACATAAAAGCAAGCCTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005336.9 ENSMUST00000066760.8 |
||
| CDS-3UTR GCA 90 bp | TGGGTAGAGAAACAAAAAGGAACTAGAGTTTCTTGGGAAGGGTCTCCCTTTCCCGGTGTAGAGAACTCCTaGTGGAAAATGTCCTCCAAC | + |
|
Preference number: 4 (lower is better) Translates to: WVEKQKGTRVSWEGSPFPGVENS*WKMSSN Trigger: GTTGGAGGACATTTTCCAGCAGGAGTTCTCTACACC...GGGAAAGGGAGACCCTTCCCAAGAAACTCTAGTTCCTTTTTGTTTCTCTACCCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000005336.9 ENSMUST00000066760.8 ENSMUST00000134942.2 |
||
| CDS-3UTR CCA 90 bp | TGGGTAGAGAAACAAAAAGGAACTAGAGTTTCTTGGGAAGGGTCTCCCTTTCCCGTCCCCCAAAACCATTaGGTAGAGTACATGAGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: WVEKQKGTRVSWEGSPFPVPQNH*VEYMRG Trigger: TCCTCTCATGTACTCTACCCAATGGTTTTGGGGGAC...GGGAAAGGGAGACCCTTCCCAAGAAACTCTAGTTCCTTTTTGTTTCTCTACCCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000005336.9 ENSMUST00000066760.8 |
||
| CDS-3UTR TCA 90 bp | TGGGTAGAGAAACAAAAAGGAACTAGAGTTTCTTGGGAAGGGTCTCCCTTTCCCTGGCCACATTCATTTTaGAGTAACCTTTCCAGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: WVEKQKGTRVSWEGSPFPWPHSF*SNLSSP Trigger: AGGGCTGGAAAGGTTACTTCAAAATGAATGTGGCCA...GGGAAAGGGAGACCCTTCCCAAGAAACTCTAGTTCCTTTTTGTTTCTCTACCCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000005336.9 ENSMUST00000066760.8 ENSMUST00000134942.2 |
||
| CDS-3UTR GCA 90 bp | AGAGGCTTGCTTTTATGTGGCCATTCCCTTCCCATCAGAAATCAATATACTCGCGGTGTAGAGAACTCCTaGTGGAAAATGTCCTCCAAC | + |
|
Preference number: 4 (lower is better) Translates to: RGLLLCGHSLPIRNQYTRGVENS*WKMSSN Trigger: GTTGGAGGACATTTTCCAGCAGGAGTTCTCTACACC...GCGAGTATATTGATTTCTGATGGGAAGGGAATGGCCACATAAAAGCAAGCCTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000005336.9 ENSMUST00000066760.8 |
||
| CDS-3UTR GCA 90 bp | AAAGAGGCTTGCTTTTATGTGGCCATTCCCTTCCCATCAGAAATCAATATACTCAGTTTGGGCATGTCCTaGTGGGTGAAGCTGAATGGC | + |
|
Preference number: 4 (lower is better) Translates to: KEACFYVAIPFPSEINILSLGMS*WVKLNG Trigger: GCCATTCAGCTTCACCCAGCAGGACATGCCCAAACT...GAGTATATTGATTTCTGATGGGAAGGGAATGGCCACATAAAAGCAAGCCTCTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005336.9 ENSMUST00000066760.8 |
||
| CDS-3UTR CCA 90 bp | AGAGGCTTGCTTTTATGTGGCCATTCCCTTCCCATCAGAAATCAATATACTCGCGCACCTCCAGATGGATaGGGATTAGCAGTAATTCCT | + |
|
Preference number: 4 (lower is better) Translates to: RGLLLCGHSLPIRNQYTRAPPDG*GLAVIP Trigger: AGGAATTACTGCTAATCCCCATCCATCTGGAGGTGC...GCGAGTATATTGATTTCTGATGGGAAGGGAATGGCCACATAAAAGCAAGCCTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005336.9 ENSMUST00000066760.8 |
||
| CDS-3UTR CCA 90 bp | AGAGGCTTGCTTTTATGTGGCCATTCCCTTCCCATCAGAAATCAATATACTCGCCAGTGCACCTCCAGATaGATGGGGATTAGCAGTAAT | + |
|
Preference number: 4 (lower is better) Translates to: RGLLLCGHSLPIRNQYTRQCTSR*MGISSN Trigger: ATTACTGCTAATCCCCATCCATCTGGAGGTGCACTG...GCGAGTATATTGATTTCTGATGGGAAGGGAATGGCCACATAAAAGCAAGCCTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000005336.9 ENSMUST00000066760.8 |
||
| CDS-3UTR TCA 90 bp | AAAGAGGCTTGCTTTTATGTGGCCATTCCCTTCCCATCAGAAATCAATATACTCCAGGGACTGTGTCCATaGCCAGATCTCCATACATGT | + |
|
Preference number: 4 (lower is better) Translates to: KEACFYVAIPFPSEINILQGLCP*PDLHTC Trigger: ACATGTATGGAGATCTGGTCATGGACACAGTCCCTG...GAGTATATTGATTTCTGATGGGAAGGGAATGGCCACATAAAAGCAAGCCTCTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005336.9 ENSMUST00000066760.8 |
||
| 3UTR CAA 72 bp | ACAAGGCAACATTCTCCTATAGAGGGAGAAAGAGGCTaGCTTTTATGTGGCCATTCCCTTCCCATCAGAAAT | + |
|
Preference number: 4 (lower is better) Translates to: TRQHSPIEGERG*LLCGHSLPIRN Trigger: ATTTCTGATGGGAAGGGAATGGCCACATAAAAGCAAGCCTCTTTCTCCCTCTATAGGAGAATGTTGCCTTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005336.9 ENSMUST00000066760.8 |
||
| CDS-3UTR GCA 90 bp | AAAGAGGCTTGCTTTTATGTGGCCATTCCCTTCCCATCAGAAATCAATATACTCGGAATGTCAGCGAGGTaGTTTTTGAGTAGAGCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: KEACFYVAIPFPSEINILGMSAR*FLSRAA Trigger: TGCTGCTCTACTCAAAAAGCACCTCGCTGACATTCC...GAGTATATTGATTTCTGATGGGAAGGGAATGGCCACATAAAAGCAAGCCTCTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000005336.9 ENSMUST00000066760.8 |
||
| CDS-3UTR GCA 90 bp | TGGGTAGAGAAACAAAAAGGAACTAGAGTTTCTTGGGAAGGGTCTCCCTTTCCCTCACTGTCATTATTCTaGCTGGCCACATTCATTTTG | + |
|
Preference number: 4 (lower is better) Translates to: WVEKQKGTRVSWEGSPFPSLSLF*LATFIL Trigger: CAAAATGAATGTGGCCAGGCAGAATAATGACAGTGA...GGGAAAGGGAGACCCTTCCCAAGAAACTCTAGTTCCTTTTTGTTTCTCTACCCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000005336.9 ENSMUST00000066760.8 ENSMUST00000134942.2 |
||
| CDS-3UTR TCA 90 bp | AGAGGCTTGCTTTTATGTGGCCATTCCCTTCCCATCAGAAATCAATATACTCGCGCAGTAATTCCTTATTaGAGATGTCCACATTTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: RGLLLCGHSLPIRNQYTRAVIPY*RCPHFW Trigger: CCAAAAATGTGGACATCTTCAATAAGGAATTACTGC...GCGAGTATATTGATTTCTGATGGGAAGGGAATGGCCACATAAAAGCAAGCCTCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000005336.9 ENSMUST00000066760.8 |
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| CDS-3UTR TCA 90 bp | ATAGAGGGAGAAAGAGGCTTGCTTTTATGTGGCCATTCCCTTCCCATCAGAAATGCAGTAATTCCTTATTaGAGATGTCCACATTTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: IEGERGLLLCGHSLPIRNAVIPY*RCPHFW Trigger: CCAAAAATGTGGACATCTTCAATAAGGAATTACTGC...ATTTCTGATGGGAAGGGAATGGCCACATAAAAGCAAGCCTCTTTCTCCCTCTAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000005336.9 ENSMUST00000066760.8 |
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| CDS TCA 90 bp | AAGGCTCTCATGGCTCGGCGCCGGCGCTGTGAGCAGGTTTTTCTATaGGAGGGTCGGAGAGCTCGAGAGCGCTGGGAGGCCCCCAGTTGG | + |
|
Preference number: 5 (lower is better) Translates to: KALMARRRRCEQVFL*EGRRARERWEAPSW Trigger: CCAACTGGGGGCCTCCCAGCGCTCTCGAGCTCTCCGACCCTCTCATAGAAAAACCTGCTCACAGCGCCGGCGCCGAGCCATGAGAGCCTT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000005336.9 ENSMUST00000066760.8 |
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| CDS CCA 90 bp | GAGAGATGGTTCTTGGGGTGCGCGAGGTTCCGCCGCCGGCCTCGGTaGCGCCCCCAAAGCTTCCAGTGGAATGTCAGCGAGGTGCTTTTT | + |
|
Preference number: 5 (lower is better) Translates to: ERWFLGCARFRRRPR*RPQSFQWNVSEVLF Trigger: AAAAAGCACCTCGCTGACATTCCACTGGAAGCTTTGGGGGCGCCACCGAGGCCGGCGGCGGAACCTCGCGCACCCCAAGAACCATCTCTC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000005336.9 ENSMUST00000066760.8 |
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| CDS TCA 90 bp | GTAGAGCAGCATCTGGAAGGCTCTCATGGCTCGGCGCCGGCGCTGTaGGCAGGTTTTTCTATGAGAGGGTCGGAGAGCTCGAGAGCGCTG | + |
|
Preference number: 5 (lower is better) Translates to: VEQHLEGSHGSAPAL*AGFSMRGSESSRAL Trigger: CAGCGCTCTCGAGCTCTCCGACCCTCTCATAGAAAAACCTGCTCACAGCGCCGGCGCCGAGCCATGAGAGCCTTCCAGATGCTGCTCTAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000005336.9 ENSMUST00000066760.8 |
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| CDS TCA 90 bp | GTGGCGCCCCCAAAGCTTCCAGTGGAATGTCAGCGAGGTGCTTTTTaGGTAGAGCAGCATCTGGAAGGCTCTCATGGCTCGGCGCCGGCG | + |
|
Preference number: 5 (lower is better) Translates to: VAPPKLPVECQRGAF*VEQHLEGSHGSAPA Trigger: CGCCGGCGCCGAGCCATGAGAGCCTTCCAGATGCTGCTCTACTCAAAAAGCACCTCGCTGACATTCCACTGGAAGCTTTGGGGGCGCCAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000005336.9 ENSMUST00000066760.8 |
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| CDS CCA 90 bp | GGTCCAGAGGAGACTTTGGGGTCCACCTTAGTCCATCTTCCTCCATaGGGGGCCCAGAGGGCACTGGTGGAGACCCTCTCATCCCATCCT | + |
|
Preference number: 5 (lower is better) Translates to: GPEETLGSTLVHLPP*GAQRALVETLSSHP Trigger: AGGATGGGATGAGAGGGTCTCCACCAGTGCCCTCTGGGCCCCCCATGGAGGAAGATGGACTAAGGTGGACCCCAAAGTCTCCTCTGGACC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000005336.9 ENSMUST00000066760.8 |
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| CDS GCA 90 bp | GGCCTCGGTGGCGCCCCCAAAGCTTCCAGTGGAATGTCAGCGAGGTaGTTTTTGAGTAGAGCAGCATCTGGAAGGCTCTCATGGCTCGGC | + |
|
Preference number: 5 (lower is better) Translates to: GLGGAPKASSGMSAR*FLSRAASGRLSWLG Trigger: GCCGAGCCATGAGAGCCTTCCAGATGCTGCTCTACTCAAAAAGCACCTCGCTGACATTCCACTGGAAGCTTTGGGGGCGCCACCGAGGCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000005336.9 ENSMUST00000066760.8 |
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| CDS-3UTR CAA 90 bp | CGGGCAGGCAGTAATCCCTTTGCGCGTCCACCACCCCCACACTGTTTTCCTGCCGGTCCAGAGGAGACTTaGGGGTCCACCTTAGTCCAT | + |
|
Preference number: 5 (lower is better) Translates to: RAGSNPFARPPPPHCFPAGPEET*GSTLVH Trigger: ATGGACTAAGGTGGACCCCAAAGTCTCCTCTGGACC...GGCAGGAAAACAGTGTGGGGGTGGTGGACGCGCAAAGGGATTACTGCCTGCCCG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000005336.9 ENSMUST00000066760.8 |
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| CDS-3UTR CAA 90 bp | CGGGCAGGCAGTAATCCCTTTGCGCGTCCACCACCCCCACACTGTTTTCCTGCCTCCAGTCGGTCTTTTTaGACTGCCTCTGCCTGTAGA | + |
|
Preference number: 5 (lower is better) Translates to: RAGSNPFARPPPPHCFPASSRSF*TASACR Trigger: TCTACAGGCAGAGGCAGTCAAAAAAGACCGACTGGA...GGCAGGAAAACAGTGTGGGGGTGGTGGACGCGCAAAGGGATTACTGCCTGCCCG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000005336.9 ENSMUST00000066760.8 |
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| CDS CCA 90 bp | TCAGCGAGGTGCTTTTTGAGTAGAGCAGCATCTGGAAGGCTCTCATaGCTCGGCGCCGGCGCTGTGAGCAGGTTTTTCTATGAGAGGGTC | + |
|
Preference number: 5 (lower is better) Translates to: SARCFLSRAASGRLS*LGAGAVSRFFYERV Trigger: GACCCTCTCATAGAAAAACCTGCTCACAGCGCCGGCGCCGAGCCATGAGAGCCTTCCAGATGCTGCTCTACTCAAAAAGCACCTCGCTGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000005336.9 ENSMUST00000066760.8 |
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| CDS-3UTR CAA 90 bp | CGGGCAGGCAGTAATCCCTTTGCGCGTCCACCACCCCCACACTGTTTTCCTGCCAAGATGTCCACATTTTaGGTCCACCTCTTTACCCCA | + |
|
Preference number: 5 (lower is better) Translates to: RAGSNPFARPPPPHCFPAKMSTF*VHLFTP Trigger: TGGGGTAAAGAGGTGGACCAAAAATGTGGACATCTT...GGCAGGAAAACAGTGTGGGGGTGGTGGACGCGCAAAGGGATTACTGCCTGCCCG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000005336.9 ENSMUST00000066760.8 |
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| CDS-3UTR CAA 90 bp | GAAGGGTCTCCCTTTCCCCTGCCCACTGATGGGCTAAGGGTCTGGGGTATGAGGTCTGCCTGTAGATACTaGGCAATATGCTTAGGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: EGSPFPLPTDGLRVWGMRSACRY*AICLGQ Trigger: CTGCCCTAAGCATATTGCCAAGTATCTACAGGCAGA...CCTCATACCCCAGACCCTTAGCCCATCAGTGGGCAGGGGAAAGGGAGACCCTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000005336.9 ENSMUST00000066760.8 ENSMUST00000134942.2 |
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| CDS-3UTR CAA 90 bp | GATCGGGCAGGCAGTAATCCCTTTGCGCGTCCACCACCCCCACACTGTTTTCCTTCTGCCTGTAGATACTaGGCAATATGCTTAGGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: DRAGSNPFARPPPPHCFPSACRY*AICLGQ Trigger: CTGCCCTAAGCATATTGCCAAGTATCTACAGGCAGA...AGGAAAACAGTGTGGGGGTGGTGGACGCGCAAAGGGATTACTGCCTGCCCGATC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000005336.9 ENSMUST00000066760.8 |
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| CDS-3UTR CAA 90 bp | GAAGATCGGGCAGGCAGTAATCCCTTTGCGCGTCCACCACCCCCACACTGTTTTTCCAGTCGGTCTTTTTaGACTGCCTCTGCCTGTAGA | + |
|
Preference number: 5 (lower is better) Translates to: EDRAGSNPFARPPPPHCFSSRSF*TASACR Trigger: TCTACAGGCAGAGGCAGTCAAAAAAGACCGACTGGA...AAAACAGTGTGGGGGTGGTGGACGCGCAAAGGGATTACTGCCTGCCCGATCTTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 2 transcripts: ENSMUST00000005336.9 ENSMUST00000066760.8 |
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| CDS-3UTR CAA 90 bp | AGAGGCTTGCTTTTATGTGGCCATTCCCTTCCCATCAGAAATCAATATACTCGCGGTCCAGAGGAGACTTaGGGGTCCACCTTAGTCCAT | + |
|
Preference number: 5 (lower is better) Translates to: RGLLLCGHSLPIRNQYTRGPEET*GSTLVH Trigger: ATGGACTAAGGTGGACCCCAAAGTCTCCTCTGGACC...GCGAGTATATTGATTTCTGATGGGAAGGGAATGGCCACATAAAAGCAAGCCTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000005336.9 ENSMUST00000066760.8 |
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| CDS-3UTR CAA 90 bp | TGGGTAGAGAAACAAAAAGGAACTAGAGTTTCTTGGGAAGGGTCTCCCTTTCCCTCAGCGAGGTGCTTTTaGAGTAGAGCAGCATCTGGA | + |
|
Preference number: 5 (lower is better) Translates to: WVEKQKGTRVSWEGSPFPSARCF*SRAASG Trigger: TCCAGATGCTGCTCTACTCAAAAAGCACCTCGCTGA...GGGAAAGGGAGACCCTTCCCAAGAAACTCTAGTTCCTTTTTGTTTCTCTACCCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000005336.9 ENSMUST00000066760.8 |
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| CDS-3UTR CAA 90 bp | TGGGTAGAGAAACAAAAAGGAACTAGAGTTTCTTGGGAAGGGTCTCCCTTTCCCTCCAGTCGGTCTTTTTaGACTGCCTCTGCCTGTAGA | + |
|
Preference number: 5 (lower is better) Translates to: WVEKQKGTRVSWEGSPFPSSRSF*TASACR Trigger: TCTACAGGCAGAGGCAGTCAAAAAAGACCGACTGGA...GGGAAAGGGAGACCCTTCCCAAGAAACTCTAGTTCCTTTTTGTTTCTCTACCCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000005336.9 ENSMUST00000066760.8 ENSMUST00000134942.2 |
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| CDS-3UTR CAA 90 bp | TGGGTAGAGAAACAAAAAGGAACTAGAGTTTCTTGGGAAGGGTCTCCCTTTCCCGACAGGGCCAGGTGCTaGCAGTACTGTAATACAAAG | + |
|
Preference number: 5 (lower is better) Translates to: WVEKQKGTRVSWEGSPFPDRARC*QYCNTK Trigger: CTTTGTATTACAGTACTGCAAGCACCTGGCCCTGTC...GGGAAAGGGAGACCCTTCCCAAGAAACTCTAGTTCCTTTTTGTTTCTCTACCCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000005336.9 ENSMUST00000066760.8 ENSMUST00000134942.2 |
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| CDS GCA 90 bp | ATCAGCTGTAGTACCAGACTCTTCCTTGAGGGTGTAGAGAACTCCTaGTGGAAAATGTCCTCCAACTTCTCTACAACTTCATCAGTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: ISCSTRLFLEGVENS*WKMSSNFSTTSSVL Trigger: CAGCACTGATGAAGTTGTAGAGAAGTTGGAGGACATTTTCCAGCAGGAGTTCTCTACACCCTCAAGGAAGAGTCTGGTACTACAGCTGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000005336.9 ENSMUST00000066760.8 ENSMUST00000134942.2 |
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| CDS CCA 90 bp | AGCTGTAGTACCAGACTCTTCCTTGAGGGTGTAGAGAACTCCTGCTaGAAAATGTCCTCCAACTTCTCTACAACTTCATCAGTGCTGAGA | + |
|
Preference number: 5 (lower is better) Translates to: SCSTRLFLEGVENSC*KMSSNFSTTSSVLR Trigger: TCTCAGCACTGATGAAGTTGTAGAGAAGTTGGAGGACATTTTCCAGCAGGAGTTCTCTACACCCTCAAGGAAGAGTCTGGTACTACAGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005336.9 ENSMUST00000066760.8 |
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| CDS CCA 90 bp | CGTCGCCTTACATCAACTGAGATAAGGGACCAGTGCACCTCCAGATaGATGGGGATTAGCAGTAATTCCTTATTGAAGATGTCCACCATA | + |
|
Preference number: 5 (lower is better) Translates to: RRLTSTEIRDQCTSR*MGISSNSLLKMSTI Trigger: TATGGTGGACATCTTCAATAAGGAATTACTGCTAATCCCCATCCATCTGGAGGTGCACTGGTCCCTTATCTCAGTTGATGTAAGGCGACG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000134942.2 |
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| CDS-3UTR CAA 90 bp | AGAGGCTTGCTTTTATGTGGCCATTCCCTTCCCATCAGAAATCAATATACTCGCTCAGCGAGGTGCTTTTaGAGTAGAGCAGCATCTGGA | + |
|
Preference number: 5 (lower is better) Translates to: RGLLLCGHSLPIRNQYTRSARCF*SRAASG Trigger: TCCAGATGCTGCTCTACTCAAAAAGCACCTCGCTGA...GCGAGTATATTGATTTCTGATGGGAAGGGAATGGCCACATAAAAGCAAGCCTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000005336.9 ENSMUST00000066760.8 |
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| CDS-3UTR CAA 90 bp | ATAGAGGGAGAAAGAGGCTTGCTTTTATGTGGCCATTCCCTTCCCATCAGAAATGACAGGGCCAGGTGCTaGCAGTACTGTAATACAAAG | + |
|
Preference number: 5 (lower is better) Translates to: IEGERGLLLCGHSLPIRNDRARC*QYCNTK Trigger: CTTTGTATTACAGTACTGCAAGCACCTGGCCCTGTC...ATTTCTGATGGGAAGGGAATGGCCACATAAAAGCAAGCCTCTTTCTCCCTCTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005336.9 ENSMUST00000066760.8 |
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| CDS CCA 90 bp | CGTCGCCTTACATCAACTGAGATAAGGGACCAGTGCACCTCCAGATaGATGGGGATTAGCAGTAATTCCTTATTGAAGATGTCCACATTT | + |
|
Preference number: 5 (lower is better) Translates to: RRLTSTEIRDQCTSR*MGISSNSLLKMSTF Trigger: AAATGTGGACATCTTCAATAAGGAATTACTGCTAATCCCCATCCATCTGGAGGTGCACTGGTCCCTTATCTCAGTTGATGTAAGGCGACG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005336.9 ENSMUST00000066760.8 |
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| CDS-3UTR CAA 90 bp | TGGGTAGAGAAACAAAAAGGAACTAGAGTTTCTTGGGAAGGGTCTCCCTTTCCCAGCAGTAATTCCTTATaGAAGATGTCCACCATAGCG | + |
|
Preference number: 5 (lower is better) Translates to: WVEKQKGTRVSWEGSPFPSSNSL*KMSTIA Trigger: CGCTATGGTGGACATCTTCAATAAGGAATTACTGCT...GGGAAAGGGAGACCCTTCCCAAGAAACTCTAGTTCCTTTTTGTTTCTCTACCCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000134942.2 |
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| CDS CCA 72 bp | GCGTTGCACCCCCTTCCTGGGGTGAGAGATGGTTCTTaGGGTGCGCGAGGTTCCGCCGCCGGCCTCGGTGGC | + |
|
Preference number: 6 (lower is better) Translates to: ALHPLPGVRDGS*GARGSAAGLGG Trigger: GCCACCGAGGCCGGCGGCGGAACCTCGCGCACCCCAAGAACCATCTCTCACCCCAGGAAGGGGGTGCAACGC 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000005336.9 ENSMUST00000066760.8 |
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| CDS CCA 72 bp | TTCTTGGGGTGCGCGAGGTTCCGCCGCCGGCCTCGGTaGCGCCCCCAAAGCTTCCAGTGGAATGTCAGCGAG | + |
|
Preference number: 6 (lower is better) Translates to: FLGCARFRRRPR*RPQSFQWNVSE Trigger: CTCGCTGACATTCCACTGGAAGCTTTGGGGGCGCCACCGAGGCCGGCGGCGGAACCTCGCGCACCCCAAGAA 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000005336.9 ENSMUST00000066760.8 |
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| CDS CAA 72 bp | GGGGTAGGGGCCAACGAAGACGCTCTCGCCTGGGATTaGAGTAAGTGGTGCCGGGTCCCGGAGGCTCAGGCC | + |
|
Preference number: 6 (lower is better) Translates to: GVGANEDALAWD*SKWCRVPEAQA Trigger: GGCCTGAGCCTCCGGGACCCGGCACCACTTACTCAAATCCCAGGCGAGAGCGTCTTCGTTGGCCCCTACCCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000005336.9 ENSMUST00000066760.8 |
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| CDS CCA 72 bp | GCCAACGAAGACGCTCTCGCCTGGGATTTGAGTAAGTaGTGCCGGGTCCCGGAGGCTCAGGCCCCCAAGACC | + |
|
Preference number: 6 (lower is better) Translates to: ANEDALAWDLSK*CRVPEAQAPKT Trigger: GGTCTTGGGGGCCTGAGCCTCCGGGACCCGGCACCACTTACTCAAATCCCAGGCGAGAGCGTCTTCGTTGGC 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000005336.9 ENSMUST00000066760.8 |
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| CDS TCA 72 bp | GCACTGGTGGAGACCCTCTCATCCCATCCTCTGCCATaGGAGCACCTAGCAGACCCAGCCGGGGTGGGGGTA | + |
|
Preference number: 6 (lower is better) Translates to: ALVETLSSHPLP*EHLADPAGVGV Trigger: TACCCCCACCCCGGCTGGGTCTGCTAGGTGCTCTCATGGCAGAGGATGGGATGAGAGGGTCTCCACCAGTGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000005336.9 ENSMUST00000066760.8 |
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| CDS CAA 90 bp | GGTGGCGCCCCCAAAGCTTCCAGTGGAATGTCAGCGAGGTGCTTTTaGAGTAGAGCAGCATCTGGAAGGCTCTCATGGCTCGGCGCCGGC | + |
|
Preference number: 6 (lower is better) Translates to: GGAPKASSGMSARCF*SRAASGRLSWLGAG Trigger: GCCGGCGCCGAGCCATGAGAGCCTTCCAGATGCTGCTCTACTCAAAAAGCACCTCGCTGACATTCCACTGGAAGCTTTGGGGGCGCCACC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000005336.9 ENSMUST00000066760.8 |
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| CDS TCA 72 bp | CATCTGGAAGGCTCTCATGGCTCGGCGCCGGCGCTGTaGGCAGGTTTTTCTATGAGAGGGTCGGAGAGCTCG | + |
|
Preference number: 6 (lower is better) Translates to: HLEGSHGSAPAL*AGFSMRGSESS Trigger: CGAGCTCTCCGACCCTCTCATAGAAAAACCTGCTCACAGCGCCGGCGCCGAGCCATGAGAGCCTTCCAGATG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000005336.9 ENSMUST00000066760.8 |
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| CDS CCA 72 bp | GAGACTTTGGGGTCCACCTTAGTCCATCTTCCTCCATaGGGGGCCCAGAGGGCACTGGTGGAGACCCTCTCA | + |
|
Preference number: 6 (lower is better) Translates to: ETLGSTLVHLPP*GAQRALVETLS Trigger: TGAGAGGGTCTCCACCAGTGCCCTCTGGGCCCCCCATGGAGGAAGATGGACTAAGGTGGACCCCAAAGTCTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000005336.9 ENSMUST00000066760.8 |
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| CDS CCA 72 bp | TGCTTTTTGAGTAGAGCAGCATCTGGAAGGCTCTCATaGCTCGGCGCCGGCGCTGTGAGCAGGTTTTTCTAT | + |
|
Preference number: 6 (lower is better) Translates to: CFLSRAASGRLS*LGAGAVSRFFY Trigger: ATAGAAAAACCTGCTCACAGCGCCGGCGCCGAGCCATGAGAGCCTTCCAGATGCTGCTCTACTCAAAAAGCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000005336.9 ENSMUST00000066760.8 |
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| CDS TCA 72 bp | CCAAAGCTTCCAGTGGAATGTCAGCGAGGTGCTTTTTaGGTAGAGCAGCATCTGGAAGGCTCTCATGGCTCG | + |
|
Preference number: 6 (lower is better) Translates to: PKLPVECQRGAF*VEQHLEGSHGS Trigger: CGAGCCATGAGAGCCTTCCAGATGCTGCTCTACTCAAAAAGCACCTCGCTGACATTCCACTGGAAGCTTTGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000005336.9 ENSMUST00000066760.8 |
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| CDS CAA 72 bp | CCCAAAGCTTCCAGTGGAATGTCAGCGAGGTGCTTTTaGAGTAGAGCAGCATCTGGAAGGCTCTCATGGCTC | + |
|
Preference number: 6 (lower is better) Translates to: PKASSGMSARCF*SRAASGRLSWL Trigger: GAGCCATGAGAGCCTTCCAGATGCTGCTCTACTCAAAAAGCACCTCGCTGACATTCCACTGGAAGCTTTGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005336.9 ENSMUST00000066760.8 |
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| CDS TCA 72 bp | AGTTCTGTCCATATAAGGTACCCAAGTCATCCATGGTaGGCACGTGTCGCTTATAGGATACCCGGAAGCCCC | + |
|
Preference number: 6 (lower is better) Translates to: SSVHIRYPSHPW*ARVAYRIPGSP Trigger: GGGGCTTCCGGGTATCCTATAAGCGACACGTGCTCACCATGGATGACTTGGGTACCTTATATGGACAGAACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005336.9 ENSMUST00000066760.8 |
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| CDS TCA 72 bp | GTCAAAATAGGTGATGGTACGTCGCCTTACATCAACTaGGATAAGGGACCAGTGCACCTCCAGATGGATGGG | + |
|
Preference number: 6 (lower is better) Translates to: VKIGDGTSPYIN*DKGPVHLQMDG Trigger: CCCATCCATCTGGAGGTGCACTGGTCCCTTATCTCAGTTGATGTAAGGCGACGTACCATCACCTATTTTGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000005336.9 ENSMUST00000066760.8 ENSMUST00000134942.2 |
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| CDS GCA 72 bp | GTACGTCGCCTTACATCAACTGAGATAAGGGACCAGTaGACCTCCAGATGGATGGGGATTAGCAGTAATTCC | + |
|
Preference number: 6 (lower is better) Translates to: VRRLTSTEIRDQ*TSRWMGISSNS Trigger: GGAATTACTGCTAATCCCCATCCATCTGGAGGTGCACTGGTCCCTTATCTCAGTTGATGTAAGGCGACGTAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000005336.9 ENSMUST00000066760.8 ENSMUST00000134942.2 |
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| CDS CAA 72 bp | ACCTCCAGATGGATGGGGATTAGCAGTAATTCCTTATaGAAGATGTCCACCATAGCGTTGCCTGGCATCCGC | + |
|
Preference number: 6 (lower is better) Translates to: TSRWMGISSNSL*KMSTIALPGIR Trigger: GCGGATGCCAGGCAACGCTATGGTGGACATCTTCAATAAGGAATTACTGCTAATCCCCATCCATCTGGAGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000134942.2 |
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| CDS CCA 72 bp | ACCAGACTCTTCCTTGAGGGTGTAGAGAACTCCTGCTaGAAAATGTCCTCCAACTTCTCTACAACTTCATCA | + |
|
Preference number: 6 (lower is better) Translates to: TRLFLEGVENSC*KMSSNFSTTSS Trigger: TGATGAAGTTGTAGAGAAGTTGGAGGACATTTTCCAGCAGGAGTTCTCTACACCCTCAAGGAAGAGTCTGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000005336.9 ENSMUST00000066760.8 ENSMUST00000134942.2 |
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| CDS TCA 72 bp | CCTCCAGATGGATGGGGATTAGCAGTAATTCCTTATTaGAGATGTCCACATTTTTGGTCCACCTCTTTACCC | + |
|
Preference number: 6 (lower is better) Translates to: PPDGWGLAVIPY*RCPHFWSTSLP Trigger: GGGTAAAGAGGTGGACCAAAAATGTGGACATCTTCAATAAGGAATTACTGCTAATCCCCATCCATCTGGAGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000005336.9 ENSMUST00000066760.8 |
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| CDS CCA 72 bp | ACATCAACTGAGATAAGGGACCAGTGCACCTCCAGATaGATGGGGATTAGCAGTAATTCCTTATTGAAGATG | + |
|
Preference number: 6 (lower is better) Translates to: TSTEIRDQCTSR*MGISSNSLLKM Trigger: CATCTTCAATAAGGAATTACTGCTAATCCCCATCCATCTGGAGGTGCACTGGTCCCTTATCTCAGTTGATGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000005336.9 ENSMUST00000066760.8 ENSMUST00000134942.2 |
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| CDS CAA 72 bp | ACCTCCAGATGGATGGGGATTAGCAGTAATTCCTTATaGAAGATGTCCACATTTTTGGTCCACCTCTTTACC | + |
|
Preference number: 6 (lower is better) Translates to: TSRWMGISSNSL*KMSTFLVHLFT Trigger: GGTAAAGAGGTGGACCAAAAATGTGGACATCTTCAATAAGGAATTACTGCTAATCCCCATCCATCTGGAGGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000005336.9 ENSMUST00000066760.8 |
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