RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SENP2 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000022855

Ensembl transcript IDs: ENSMUST00000023561.8, ENSMUST00000231724.2, ENSMUST00000231798.2, ENSMUST00000232263.2, ENSMUST00000232534.2, ENSMUST00000232679.2

Found 308 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TCTCCATCACTCTTCCTGCTCCTCCCAGGAAGGATCTACCGACCCTaGCTCTCCCCACTGGGAACTGGGATTACAGATGTGAGCAGGGAT +
Preference number: 1 (lower is better)
Translates to: SPSLFLLLPGRIYRP*LSPLGTGITDVSRD
Trigger: ATCCCTGCTCACATCTGTAATCCCAGTTCCCAGTGGGGAGAGGCAGGGTCGGTAGATCCTTCCTGGGAGGAGCAGGAAGAGTGATGGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000023561.8
3UTR GCA 90 bp TATGAGCAGACATGGGAGAGGGAAGTTGTTCTCCATCACTCTTCCTaGTCCTCCCAGGAAGGATCTACCGACCCTGCCTCTCCCCACTGG +
Preference number: 1 (lower is better)
Translates to: YEQTWEREVVLHHSS*SSQEGSTDPASPHW
Trigger: CCAGTGGGGAGAGGCAGGGTCGGTAGATCCTTCCTGGGAGGAGCAGGAAGAGTGATGGAGAACAACTTCCCTCTCCCATGTCTGCTCATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000023561.8
3UTR CCA 90 bp CCTCCCAGGAAGGATCTACCGACCCTGCCTCTCCCCACTGGGAACTaGGATTACAGATGTGAGCAGGGATCCAGCTTGTTACAGACACAC +
Preference number: 1 (lower is better)
Translates to: PPRKDLPTLPLPTGN*DYRCEQGSSLLQTH
Trigger: GTGTGTCTGTAACAAGCTGGATCCCTGCTCACATCTGTAATCCCAGTTCCCAGTGGGGAGAGGCAGGGTCGGTAGATCCTTCCTGGGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000023561.8
3UTR CCA 90 bp GTTCTGTTACCCGTGCGCACACAGGTGACAGAGAGCTGGGGCTTCTaGTACCTTAGCTTGGATTCAGACACTCAGGTAAAGCAGTGCCAC +
Preference number: 1 (lower is better)
Translates to: VLLPVRTQVTESWGF*YLSLDSDTQVKQCH
Trigger: GTGGCACTGCTTTACCTGAGTGTCTGAATCCAAGCTAAGGTACCAGAAGCCCCAGCTCTCTGTCACCTGTGTGCGCACGGGTAACAGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000023561.8
3UTR CCA 90 bp GCCTTCCGATTTCAGCGTAAAACCAAAGGAGGGCAGGACTCTCCGTaGCTGATCGCGGGTCACTGTCACTCTGATCTTTGGATAGTCGCT +
Preference number: 1 (lower is better)
Translates to: AFRFQRKTKGGQDSP*LIAGHCHSDLWIVA
Trigger: AGCGACTATCCAAAGATCAGAGTGACAGTGACCCGCGATCAGCCACGGAGAGTCCTGCCCTCCTTTGGTTTTACGCTGAAATCGGAAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000231724.2
ENSMUST00000231798.2
3UTR CCA 90 bp GCGGGTGATTCGCAACTTGAAAGCGCTGCTCAAAATCTCATCTGGTaGGCCGTGGCCCAGGGCATTACTGATTTCCTTTTCCATGTCCTC +
Preference number: 1 (lower is better)
Translates to: AGDSQLESAAQNLIW*AVAQGITDFLFHVL
Trigger: GAGGACATGGAAAAGGAAATCAGTAATGCCCTGGGCCACGGCCCACCAGATGAGATTTTGAGCAGCGCTTTCAAGTTGCGAATCACCCGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000231724.2
ENSMUST00000231798.2
ENSMUST00000232263.2
ENSMUST00000232679.2
3UTR CCA 90 bp TCCGCGGGTGATTCGCAACTTGAAAGCGCTGCTCAAAATCTCATCTaGTGGGCCGTGGCCCAGGGCATTACTGATTTCCTTTTCCATGTC +
Preference number: 1 (lower is better)
Translates to: SAGDSQLESAAQNLI*WAVAQGITDFLFHV
Trigger: GACATGGAAAAGGAAATCAGTAATGCCCTGGGCCACGGCCCACCAGATGAGATTTTGAGCAGCGCTTTCAAGTTGCGAATCACCCGCGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000231724.2
ENSMUST00000231798.2
ENSMUST00000232263.2
ENSMUST00000232679.2
3UTR CCA 90 bp TACTTTTCTCTTTCATCCTTTTGGACACCCTCCTCCACGGTGCAGTaGGGACGCCTCACACCCTTGCCACCCTCTTCAGAAATCATCTCT +
Preference number: 1 (lower is better)
Translates to: YFSLSSFWTPSSTVQ*GRLTPLPPSSEIIS
Trigger: AGAGATGATTTCTGAAGAGGGTGGCAAGGGTGTGAGGCGTCCCCACTGCACCGTGGAGGAGGGTGTCCAAAAGGATGAAAGAGAAAAGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000231724.2
ENSMUST00000231798.2
ENSMUST00000232679.2
3UTR CCA 90 bp CAGAAGGGGCCACATTCCGTGTTCCATTACAAGCAGAAGACACCATaGGTTTTGTGGTCAGCTGGAACGGGAATCCAAATAAACTGGCAG +
Preference number: 1 (lower is better)
Translates to: QKGPHSVFHYKQKTP*VLWSAGTGIQINWQ
Trigger: CTGCCAGTTTATTTGGATTCCCGTTCCAGCTGACCACAAAACCCATGGTGTCTTCTGCTTGTAATGGAACACGGAATGTGGCCCCTTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000231724.2
3UTR TCA 90 bp TCATTTCAAGTCTCAGAGCAAACAGGTTTCAACAGCTACAACCTCTaGTCAGCTGCCCAGGCGTCCCAAGAGCAGACGTGTACGTTTGTA +
Preference number: 1 (lower is better)
Translates to: SFQVSEQTGFNSYNL*SAAQASQEQTCTFV
Trigger: TACAAACGTACACGTCTGCTCTTGGGACGCCTGGGCAGCTGATCAGAGGTTGTAGCTGTTGAAACCTGTTTGCTCTGAGACTTGAAATGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023561.8
ENSMUST00000232263.2
3UTR TCA 90 bp CCATTGTGGAGAGGCCTTCATGCACTCTTGAGAGCTCAGTACCTGTaGGAGAAGAGAAATGATCGGGGACTTTTTAACCCACAATGCATG +
Preference number: 1 (lower is better)
Translates to: PLWRGLHALLRAQYL*EKRNDRGLFNPQCM
Trigger: CATGCATTGTGGGTTAAAAAGTCCCCGATCATTTCTCTTCTCTCACAGGTACTGAGCTCTCAAGAGTGCATGAAGGCCTCTCCACAATGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000023561.8
ENSMUST00000231724.2
ENSMUST00000231798.2
ENSMUST00000232263.2
ENSMUST00000232679.2
3UTR TCA 90 bp ATAAGAACTTACTGTGTGTGCACAGGAATGTGGTGGATGCGCTTATaGGCAGACATGGGAGAGGGAAGTTGTTCTCCATCACTCTTCCTG +
Preference number: 1 (lower is better)
Translates to: IRTYCVCTGMWWMRL*ADMGEGSCSPSLFL
Trigger: CAGGAAGAGTGATGGAGAACAACTTCCCTCTCCCATGTCTGCTCATAAGCGCATCCACCACATTCCTGTGCACACACAGTAAGTTCTTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000023561.8
3UTR GCA 90 bp CTTGCTCCTGAGGCTTCCATGTTAAGGAACTCTCTGGATTGCTTTTaGTATGGCGACGACCACTTGGCCTTCTATTATAGCCTTCCGATT +
Preference number: 1 (lower is better)
Translates to: LAPEASMLRNSLDCF*YGDDHLAFYYSLPI
Trigger: AATCGGAAGGCTATAATAGAAGGCCAAGTGGTCGTCGCCATAGCAAAAGCAATCCAGAGAGTTCCTTAACATGGAAGCCTCAGGAGCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000231724.2
ENSMUST00000231798.2
ENSMUST00000232679.2
3UTR GCA 90 bp TCACACCTTGCTCCTGAGGCTTCCATGTTAAGGAACTCTCTGGATTaGTTTTGCTATGGCGACGACCACTTGGCCTTCTATTATAGCCTT +
Preference number: 1 (lower is better)
Translates to: SHLAPEASMLRNSLD*FCYGDDHLAFYYSL
Trigger: AAGGCTATAATAGAAGGCCAAGTGGTCGTCGCCATAGCAAAAGCAATCCAGAGAGTTCCTTAACATGGAAGCCTCAGGAGCAAGGTGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000231724.2
ENSMUST00000231798.2
ENSMUST00000232679.2
3UTR CCA 90 bp CCACATTCCGTGTTCCATTACAAGCAGAAGACACCATGGGTTTTGTaGTCAGCTGGAACGGGAATCCAAATAAACTGGCAGCATTGTAGA +
Preference number: 1 (lower is better)
Translates to: PHSVFHYKQKTPWVL*SAGTGIQINWQHCR
Trigger: TCTACAATGCTGCCAGTTTATTTGGATTCCCGTTCCAGCTGACCACAAAACCCATGGTGTCTTCTGCTTGTAATGGAACACGGAATGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000231724.2
3UTR TCA 90 bp TCGGGAAGTTCTTTTCCTTTATCTCAAGCACTGATATTTTCCTTCTaGGTAAGCCATTGCTTCCACTTCCTAGACGAAGTCGGGCAGACA +
Preference number: 1 (lower is better)
Translates to: SGSSFPLSQALIFSF*VSHCFHFLDEVGQT
Trigger: TGTCTGCCCGACTTCGTCTAGGAAGTGGAAGCAATGGCTTACTCAGAAGGAAAATATCAGTGCTTGAGATAAAGGAAAAGAACTTCCCGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000231724.2
ENSMUST00000231798.2
ENSMUST00000232263.2
ENSMUST00000232679.2
3UTR GCA 90 bp GGCTTCTGGTACCTTAGCTTGGATTCAGACACTCAGGTAAAGCAGTaGCACCATAGCTTAACATTCTGTACTTTTGCATTTTCCATCTTC +
Preference number: 1 (lower is better)
Translates to: GFWYLSLDSDTQVKQ*HHSLTFCTFAFSIF
Trigger: GAAGATGGAAAATGCAAAAGTACAGAATGTTAAGCTATGGTGGCACTGCTTTACCTGAGTGTCTGAATCCAAGCTAAGGTACCAGAAGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000023561.8
3UTR TCA 90 bp TTGTTTCAACAACTCTATACTGTTTTGGAACAAAATGGGTTGTTCTaGCGCCATGATTCTGCTCCTCCACCCAGCCTTTGGTCTTTAATG +
Preference number: 1 (lower is better)
Translates to: LFQQLYTVLEQNGLF*RHDSAPPPSLWSLM
Trigger: CATTAAAGACCAAAGGCTGGGTGGAGGAGCAGAATCATGGCGTCAGAACAACCCATTTTGTTCCAAAACAGTATAGAGTTGTTGAAACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000231724.2
ENSMUST00000231798.2
ENSMUST00000232679.2
3UTR TCA 90 bp GAATCTCATGTGGCTTCATGCTGTAGTGGGTCCACTCTAAGAGGTTaGGATCTGTATTTCTTTTGGTCTTGCTTTCATCCTGTAAATACT +
Preference number: 1 (lower is better)
Translates to: ESHVASCCSGSTLRG*DLYFFWSCFHPVNT
Trigger: AGTATTTACAGGATGAAAGCAAGACCAAAAGAAATACAGATCTCAACCTCTTAGAGTGGACCCACTACAGCATGAAGCCACATGAGATTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000231724.2
ENSMUST00000231798.2
ENSMUST00000232263.2
ENSMUST00000232679.2
3UTR-3UTR CCA 90 bp CCACCAGCAGCTAGAAGACCAGGCGGGGCATTGTCACAGCAACTGCTGGTGAAGGGGCAGGACTCTCCGTaGCTGATCGCGGGTCACTGT +
Preference number: 2 (lower is better)
Translates to: PPAARRPGGALSQQLLVKGQDSP*LIAGHC
Trigger: ACAGTGACCCGCGATCAGCCACGGAGAGTCCTGCCC...CTTCACCAGCAGTTGCTGTGACAATGCCCCGCCTGGTCTTCTAGCTGCTGGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000231724.2
ENSMUST00000231798.2
ENSMUST00000232679.2
3UTR-3UTR TCA 90 bp TCAGAGCCAAGTACTAATCTCTCTCCAAAGGCTCAGTGGGGCTGGAGTGGGGCACCGTGCGCACACAGGTaGCAGAGAGCTGGGGCTTCT +
Preference number: 2 (lower is better)
Translates to: SEPSTNLSPKAQWGWSGAPCAHR*QRAGAS
Trigger: AGAAGCCCCAGCTCTCTGTCACCTGTGTGCGCACGG...TGCCCCACTCCAGCCCCACTGAGCCTTTGGAGAGAGATTAGTACTTGGCTCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000023561.8
3UTR-3UTR CCA 90 bp TCCTCCCAGGAAGGATCTACCGACCCTGCCTCTCCCCACTGGGAACTGGGATTATCAGTGGGGCTGGAGTaGGGCATGCTGATGAGCCAA +
Preference number: 2 (lower is better)
Translates to: SSQEGSTDPASPHWELGLSVGLE*GMLMSQ
Trigger: TTGGCTCATCAGCATGCCCCACTCCAGCCCCACTGA...TAATCCCAGTTCCCAGTGGGGAGAGGCAGGGTCGGTAGATCCTTCCTGGGAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000023561.8
3UTR-3UTR GCA 90 bp GAGCAGACAGCTCAGGCCAGCCCTTCCCTGGTGAGGCTCACACACTCACTCACCGTGGAGAGGCCTTCATaGACTCTTGAGAGCTCAGTA +
Preference number: 2 (lower is better)
Translates to: EQTAQASPSLVRLTHSLTVERPS*TLESSV
Trigger: TACTGAGCTCTCAAGAGTGCATGAAGGCCTCTCCAC...GGTGAGTGAGTGTGTGAGCCTCACCAGGGAAGGGCTGGCCTGAGCTGTCTGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000023561.8
ENSMUST00000231798.2
ENSMUST00000232263.2
3UTR-3UTR CCA 90 bp TCTCGGGTTGGCTCAGCCATTTCAGTCCCCATCACAGGCCCAGCTTCCATAACGTCAGTGGGGCTGGAGTaGGGCATGCTGATGAGCCAA +
Preference number: 2 (lower is better)
Translates to: SRVGSAISVPITGPASITSVGLE*GMLMSQ
Trigger: TTGGCTCATCAGCATGCCCCACTCCAGCCCCACTGA...CGTTATGGAAGCTGGGCCTGTGATGGGGACTGAAATGGCTGAGCCAACCCGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000023561.8
ENSMUST00000232263.2
3UTR-3UTR CCA 90 bp CTACAACCTCTGATCAGCTGCCCAGGCGTCCCAAGAGCAGACGTGTACGTTTGTTCTCCAAAGGCTCAGTaGGGCTGGAGTGGGGCATGC +
Preference number: 2 (lower is better)
Translates to: LQPLISCPGVPRADVYVCSPKAQ*GWSGAC
Trigger: GCATGCCCCACTCCAGCCCCACTGAGCCTTTGGAGA...ACAAACGTACACGTCTGCTCTTGGGACGCCTGGGCAGCTGATCAGAGGTTGTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000023561.8
ENSMUST00000232263.2
3UTR-3UTR CCA 90 bp AGGGCCATTGTGGAGAGGCCTTCATGCACTCTTGAGAGCTCAGTACCTGTGAGAGGGCAGGACTCTCCGTaGCTGATCGCGGGTCACTGT +
Preference number: 2 (lower is better)
Translates to: RAIVERPSCTLESSVPVRGQDSP*LIAGHC
Trigger: ACAGTGACCCGCGATCAGCCACGGAGAGTCCTGCCC...TCTCACAGGTACTGAGCTCTCAAGAGTGCATGAAGGCCTCTCCACAATGGCCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000231724.2
ENSMUST00000231798.2
ENSMUST00000232679.2
3UTR-3UTR TCA 90 bp GAGCAGACAGCTCAGGCCAGCCCTTCCCTGGTGAGGCTCACACACTCACTCACCTGCCCAATGAGAGAGTaGATTCGTGTGAACACACAG +
Preference number: 2 (lower is better)
Translates to: EQTAQASPSLVRLTHSLTCPMRE*IRVNTQ
Trigger: CTGTGTGTTCACACGAATTCACTCTCTCATTGGGCA...GGTGAGTGAGTGTGTGAGCCTCACCAGGGAAGGGCTGGCCTGAGCTGTCTGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000023561.8
ENSMUST00000231798.2
ENSMUST00000232263.2
3UTR-3UTR CCA 90 bp CAAGTACTAATCTCTCTCCAAAGGCTCAGTGGGGCTGGAGTGGGGCATGCTGATTCTCCAAAGGCTCAGTaGGGCTGGAGTGGGGCATGC +
Preference number: 2 (lower is better)
Translates to: QVLISLQRLSGAGVGHADSPKAQ*GWSGAC
Trigger: GCATGCCCCACTCCAGCCCCACTGAGCCTTTGGAGA...ATCAGCATGCCCCACTCCAGCCCCACTGAGCCTTTGGAGAGAGATTAGTACTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000023561.8
ENSMUST00000231798.2
ENSMUST00000232263.2
3UTR-3UTR TCA 90 bp CCCGTGCGCACACAGGTGACAGAGAGCTGGGGCTTCTGGTACCTTAGCTTGGATCCATCCAAGCAGGACTaGGCCAACAGAAACAAACCT +
Preference number: 2 (lower is better)
Translates to: PVRTQVTESWGFWYLSLDPSKQD*ANRNKP
Trigger: AGGTTTGTTTCTGTTGGCTCAGTCCTGCTTGGATGG...ATCCAAGCTAAGGTACCAGAAGCCCCAGCTCTCTGTCACCTGTGTGCGCACGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000023561.8
3UTR-3UTR TCA 90 bp ATCTCTCTCCAAAGGCTCAGTGGGGCTGGAGTGGGGCATGCTGATGAGCCAAGATGTTCTTGTATGGGGTaGATAGTCCAGGGCTCTGAG +
Preference number: 2 (lower is better)
Translates to: ISLQRLSGAGVGHADEPRCSCMG*IVQGSE
Trigger: CTCAGAGCCCTGGACTATTCACCCCATACAAGAACA...TCTTGGCTCATCAGCATGCCCCACTCCAGCCCCACTGAGCCTTTGGAGAGAGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000023561.8
ENSMUST00000231798.2
ENSMUST00000232263.2
3UTR-3UTR CCA 90 bp CCACCAGCAGCTAGAAGACCAGGCGGGGCATTGTCACAGCAACTGCTGGTGAAGAGATCAGGCTCCATTTaGTGTCCTCTTGTACCTTCC +
Preference number: 2 (lower is better)
Translates to: PPAARRPGGALSQQLLVKRSGSI*CPLVPS
Trigger: GGAAGGTACAAGAGGACACCAAATGGAGCCTGATCT...CTTCACCAGCAGTTGCTGTGACAATGCCCCGCCTGGTCTTCTAGCTGCTGGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000231724.2
ENSMUST00000231798.2
ENSMUST00000232679.2
3UTR-3UTR TCA 90 bp TTCGCCCTCCAGTGTGGGCACTGGGGATCAAACTCTGGTCAGGTAGCTATTTTGAATAGTCCAGGGCTCTaGGCAGGCACAGCCTTAGAA +
Preference number: 2 (lower is better)
Translates to: FALQCGHWGSNSGQVAILNSPGL*AGTALE
Trigger: TTCTAAGGCTGTGCCTGCTCAGAGCCCTGGACTATT...CAAAATAGCTACCTGACCAGAGTTTGATCCCCAGTGCCCACACTGGAGGGCGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000023561.8
ENSMUST00000232263.2
3UTR-3UTR GCA 90 bp CAACCTCTGATCAGCTGCCCAGGCGTCCCAAGAGCAGACGTGTACGTTTGTATCGTGGAGAGGCCTTCATaGACTCTTGAGAGCTCAGTA +
Preference number: 2 (lower is better)
Translates to: QPLISCPGVPRADVYVCIVERPS*TLESSV
Trigger: TACTGAGCTCTCAAGAGTGCATGAAGGCCTCTCCAC...GATACAAACGTACACGTCTGCTCTTGGGACGCCTGGGCAGCTGATCAGAGGTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023561.8
ENSMUST00000232263.2
3UTR CAA 90 bp CTCCCCACTGGGAACTGGGATTACAGATGTGAGCAGGGATCCAGCTaGTTACAGACACACCTGGCTGAGACTAAAAGTCAATCCTGGCCT +
Preference number: 2 (lower is better)
Translates to: LPTGNWDYRCEQGSS*LQTHLAETKSQSWP
Trigger: AGGCCAGGATTGACTTTTAGTCTCAGCCAGGTGTGTCTGTAACAAGCTGGATCCCTGCTCACATCTGTAATCCCAGTTCCCAGTGGGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000023561.8
3UTR CAA 90 bp GTGCGCACACAGGTGACAGAGAGCTGGGGCTTCTGGTACCTTAGCTaGGATTCAGACACTCAGGTAAAGCAGTGCCACCATAGCTTAACA +
Preference number: 2 (lower is better)
Translates to: VRTQVTESWGFWYLS*DSDTQVKQCHHSLT
Trigger: TGTTAAGCTATGGTGGCACTGCTTTACCTGAGTGTCTGAATCCAAGCTAAGGTACCAGAAGCCCCAGCTCTCTGTCACCTGTGTGCGCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000023561.8
3UTR CAA 90 bp ACATCCATCAAAGAACCACCAGCAGCTAGAAGACCAGGCGGGGCATaGTCACAGCAACTGCTGGTGAAGGATCTCCCACACCATCTTCTT +
Preference number: 2 (lower is better)
Translates to: TSIKEPPAARRPGGA*SQQLLVKDLPHHLL
Trigger: AAGAAGATGGTGTGGGAGATCCTTCACCAGCAGTTGCTGTGACAATGCCCCGCCTGGTCTTCTAGCTGCTGGTGGTTCTTTGATGGATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000231724.2
ENSMUST00000231798.2
ENSMUST00000232263.2
ENSMUST00000232679.2
3UTR-3UTR TCA 90 bp CCACCAGCAGCTAGAAGACCAGGCGGGGCATTGTCACAGCAACTGCTGGTGAAGCTGATATTTTCCTTCTaGGTAAGCCATTGCTTCCAC +
Preference number: 2 (lower is better)
Translates to: PPAARRPGGALSQQLLVKLIFSF*VSHCFH
Trigger: GTGGAAGCAATGGCTTACTCAGAAGGAAAATATCAG...CTTCACCAGCAGTTGCTGTGACAATGCCCCGCCTGGTCTTCTAGCTGCTGGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000231724.2
ENSMUST00000231798.2
ENSMUST00000232263.2
ENSMUST00000232679.2
3UTR-3UTR GCA 90 bp TCAAAGAACCACCAGCAGCTAGAAGACCAGGCGGGGCATTGTCACAGCAACTGCAGGAACTCTCTGGATTaGTTTTGCTATGGCGACGAC +
Preference number: 2 (lower is better)
Translates to: SKNHQQLEDQAGHCHSNCRNSLD*FCYGDD
Trigger: GTCGTCGCCATAGCAAAAGCAATCCAGAGAGTTCCT...GCAGTTGCTGTGACAATGCCCCGCCTGGTCTTCTAGCTGCTGGTGGTTCTTTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000231724.2
ENSMUST00000231798.2
ENSMUST00000232679.2
3UTR-3UTR GCA 90 bp CCCTCCACACCTCTAGTCAGGGCCATTGTGGAGAGGCCTTCATGCACTCTTGAGGGTCCATCTTTTCACTaGTTGGTAACCTCCAGACTT +
Preference number: 2 (lower is better)
Translates to: PSTPLVRAIVERPSCTLEGPSFH*LVTSRL
Trigger: AAGTCTGGAGGTTACCAAGCAGTGAAAAGATGGACC...CTCAAGAGTGCATGAAGGCCTCTCCACAATGGCCCTGACTAGAGGTGTGGAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000231798.2
ENSMUST00000232263.2
ENSMUST00000232679.2
3UTR-3UTR CCA 90 bp GAAGAGATTTACCCCTTTGGTCCATCTTTTCACTGCTTGGTAACCTCCAGACTTGGGCAGGACTCTCCGTaGCTGATCGCGGGTCACTGT +
Preference number: 2 (lower is better)
Translates to: EEIYPFGPSFHCLVTSRLGQDSP*LIAGHC
Trigger: ACAGTGACCCGCGATCAGCCACGGAGAGTCCTGCCC...AAGTCTGGAGGTTACCAAGCAGTGAAAAGATGGACCAAAGGGGTAAATCTCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000231724.2
ENSMUST00000231798.2
ENSMUST00000232679.2
3UTR-3UTR TCA 90 bp AGGCCCAGCTTCCATAACGAAGGTCATTTCAAGTCTCAGAGCAAACAGGTTTCACCTTCCTCCCCCTGCTaGTATCTCTCTGCAGCAGGA +
Preference number: 2 (lower is better)
Translates to: RPSFHNEGHFKSQSKQVSPSSPC*YLSAAG
Trigger: TCCTGCTGCAGAGAGATATCAGCAGGGGGAGGAAGG...TGAAACCTGTTTGCTCTGAGACTTGAAATGACCTTCGTTATGGAAGCTGGGCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000023561.8
ENSMUST00000232263.2
3UTR-3UTR TCA 90 bp AAACATCCATCAAAGAACCACCAGCAGCTAGAAGACCAGGCGGGGCATTGTCACGGCAGACACTTCTTCTaGCAGATCAGGCTCCATTTG +
Preference number: 2 (lower is better)
Translates to: KHPSKNHQQLEDQAGHCHGRHFF*QIRLHL
Trigger: CAAATGGAGCCTGATCTGTCAGAAGAAGTGTCTGCC...GTGACAATGCCCCGCCTGGTCTTCTAGCTGCTGGTGGTTCTTTGATGGATGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000231724.2
ENSMUST00000231798.2
ENSMUST00000232263.2
ENSMUST00000232679.2
3UTR-3UTR TCA 90 bp ATCTCTCTCCAAAGGCTCAGTGGGGCTGGAGTGGGGCATGCTGATGAGCCAAGACAATGTACCTTCCGATaGATAGGTACCAGAACAAGT +
Preference number: 2 (lower is better)
Translates to: ISLQRLSGAGVGHADEPRQCTFR*IGTRTS
Trigger: ACTTGTTCTGGTACCTATTCATCGGAAGGTACATTG...TCTTGGCTCATCAGCATGCCCCACTCCAGCCCCACTGAGCCTTTGGAGAGAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000231798.2
ENSMUST00000232263.2
3UTR-3UTR GCA 90 bp TGCTTCCACTTCCTAGACGAAGTCGGGCAGACACTTCTTCTGACAGATCAGGCTGTGGAGAGGCCTTCATaGACTCTTGAGAGCTCAGTA +
Preference number: 2 (lower is better)
Translates to: CFHFLDEVGQTLLLTDQAVERPS*TLESSV
Trigger: TACTGAGCTCTCAAGAGTGCATGAAGGCCTCTCCAC...AGCCTGATCTGTCAGAAGAAGTGTCTGCCCGACTTCGTCTAGGAAGTGGAAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000231724.2
ENSMUST00000231798.2
ENSMUST00000232263.2
ENSMUST00000232679.2
3UTR-3UTR GCA 90 bp AGGGCCATTGTGGAGAGGCCTTCATGCACTCTTGAGAGCTCAGTACCTGTGAGAAGGAACTCTCTGGATTaGTTTTGCTATGGCGACGAC +
Preference number: 2 (lower is better)
Translates to: RAIVERPSCTLESSVPVRRNSLD*FCYGDD
Trigger: GTCGTCGCCATAGCAAAAGCAATCCAGAGAGTTCCT...TCTCACAGGTACTGAGCTCTCAAGAGTGCATGAAGGCCTCTCCACAATGGCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000231724.2
ENSMUST00000231798.2
ENSMUST00000232679.2
3UTR-3UTR CCA 90 bp AGGGCCATTGTGGAGAGGCCTTCATGCACTCTTGAGAGCTCAGTACCTGTGAGAAGATCAGGCTCCATTTaGTGTCCTCTTGTACCTTCC +
Preference number: 2 (lower is better)
Translates to: RAIVERPSCTLESSVPVRRSGSI*CPLVPS
Trigger: GGAAGGTACAAGAGGACACCAAATGGAGCCTGATCT...TCTCACAGGTACTGAGCTCTCAAGAGTGCATGAAGGCCTCTCCACAATGGCCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000231724.2
ENSMUST00000231798.2
ENSMUST00000232679.2
3UTR-3UTR TCA 90 bp CATTCAACTGCTGAGGAATCTCATGTGGCTTCATGCTGTAGTGGGTCCACTCTAAATAGTCCAGGGCTCTaGGCAGGCACAGCCTTAGAA +
Preference number: 2 (lower is better)
Translates to: HSTAEESHVASCCSGSTLNSPGL*AGTALE
Trigger: TTCTAAGGCTGTGCCTGCTCAGAGCCCTGGACTATT...TAGAGTGGACCCACTACAGCATGAAGCCACATGAGATTCCTCAGCAGTTGAATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000231798.2
ENSMUST00000232263.2
ENSMUST00000232679.2
3UTR-3UTR TCA 90 bp CACTGGGGATCAAACTCTGGTCAGGTAGCTATTTTGTTTGATAGGCCGGGATCAAATAGTCCAGGGCTCTaGGCAGGCACAGCCTTAGAA +
Preference number: 2 (lower is better)
Translates to: HWGSNSGQVAILFDRPGSNSPGL*AGTALE
Trigger: TTCTAAGGCTGTGCCTGCTCAGAGCCCTGGACTATT...TGATCCCGGCCTATCAAACAAAATAGCTACCTGACCAGAGTTTGATCCCCAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000023561.8
ENSMUST00000232263.2
3UTR-3UTR TCA 90 bp TATTCTTCTCATAAGCTCAATGTAACAGTTCTGTTACCCGTGCGCACACAGGTGCCTTCCTCCCCCTGCTaGTATCTCTCTGCAGCAGGA +
Preference number: 2 (lower is better)
Translates to: YSSHKLNVTVLLPVRTQVPSSPC*YLSAAG
Trigger: TCCTGCTGCAGAGAGATATCAGCAGGGGGAGGAAGG...CACCTGTGTGCGCACGGGTAACAGAACTGTTACATTGAGCTTATGAGAAGAATA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000023561.8
3UTR-3UTR TCA 90 bp CATTTGGTGTCCTCTTGTACCTTCCTTTTCAAATCGGAGTCCCACCACCTTCTCGGGAACGTGCTTCCATaGGCACCTTCTTTAAGTCGC +
Preference number: 2 (lower is better)
Translates to: HLVSSCTFLFKSESHHLLGNVLP*APSLSR
Trigger: GCGACTTAAAGAAGGTGCTCATGGAAGCACGTTCCC...GAGAAGGTGGTGGGACTCCGATTTGAAAAGGAAGGTACAAGAGGACACCAAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000231724.2
ENSMUST00000231798.2
ENSMUST00000232679.2
3UTR-3UTR TCA 90 bp AGCAGTGGGAAAAGGGCACTGCCCAATGAGAGAGTGAATTCGTGTGAACACACAGGCCCAGGGCATTACTaGTTTCCTTTTCCATGTCCT +
Preference number: 2 (lower is better)
Translates to: SSGKRALPNERVNSCEHTGPGHY*FPFPCP
Trigger: AGGACATGGAAAAGGAAATCAGTAATGCCCTGGGCC...TGTGTGTTCACACGAATTCACTCTCTCATTGGGCAGTGCCCTTTTCCCACTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000231798.2
ENSMUST00000232263.2
ENSMUST00000232679.2
3UTR-3UTR GCA 90 bp TCAGAGCCAAGTACTAATCTCTCTCCAAAGGCTCAGTGGGGCTGGAGTGGGGCAGAGGACACCTTCAAATaGCACATTAGCTATAGCATC +
Preference number: 2 (lower is better)
Translates to: SEPSTNLSPKAQWGWSGAEDTFK*HISYSI
Trigger: GATGCTATAGCTAATGTGGCATTTGAAGGTGTCCTC...TGCCCCACTCCAGCCCCACTGAGCCTTTGGAGAGAGATTAGTACTTGGCTCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000023561.8
3UTR-3UTR CCA 90 bp TCAGAGCCAAGTACTAATCTCTCTCCAAAGGCTCAGTGGGGCTGGAGTGGGGCAATTTGGTCCATCTGTTaGTTTGTGCAAGTATGGAGG +
Preference number: 2 (lower is better)
Translates to: SEPSTNLSPKAQWGWSGAIWSIC*FVQVWR
Trigger: CCTCCATACTTGCACAAACCAACAGATGGACCAAAT...TGCCCCACTCCAGCCCCACTGAGCCTTTGGAGAGAGATTAGTACTTGGCTCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000023561.8
ENSMUST00000232263.2
3UTR-3UTR CCA 90 bp AACTCTATACTGTTTTGGAACAAAATGGGTTGTTCTGACGCCATGATTCTGCTCTCCTCCACGGTGCAGTaGGGACGCCTCACACCCTTG +
Preference number: 2 (lower is better)
Translates to: NSILFWNKMGCSDAMILLSSTVQ*GRLTPL
Trigger: CAAGGGTGTGAGGCGTCCCCACTGCACCGTGGAGGA...GAGCAGAATCATGGCGTCAGAACAACCCATTTTGTTCCAAAACAGTATAGAGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000231724.2
ENSMUST00000231798.2
ENSMUST00000232679.2
3UTR CAA 90 bp GGGCCACATTCCGTGTTCCATTACAAGCAGAAGACACCATGGGTTTaGTGGTCAGCTGGAACGGGAATCCAAATAAACTGGCAGCATTGT +
Preference number: 2 (lower is better)
Translates to: GPHSVFHYKQKTPWV*WSAGTGIQINWQHC
Trigger: ACAATGCTGCCAGTTTATTTGGATTCCCGTTCCAGCTGACCACAAAACCCATGGTGTCTTCTGCTTGTAATGGAACACGGAATGTGGCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000231724.2
3UTR CAA 90 bp GGGCAGACACTTCTTCTGACAGATCAGGCTCCATTTGGTGTCCTCTaGTACCTTCCTTTTCAAATCGGAGTCCCACCACCTTCTCTGTAT +
Preference number: 2 (lower is better)
Translates to: GQTLLLTDQAPFGVL*YLPFQIGVPPPSLY
Trigger: ATACAGAGAAGGTGGTGGGACTCCGATTTGAAAAGGAAGGTACAAGAGGACACCAAATGGAGCCTGATCTGTCAGAAGAAGTGTCTGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000231724.2
ENSMUST00000231798.2
ENSMUST00000232679.2
3UTR-3UTR TCA 90 bp CAACCTCTGATCAGCTGCCCAGGCGTCCCAAGAGCAGACGTGTACGTTTGTATCTGCTCACAGTTACTTTaGATCCAGTTTCAAGAGGAA +
Preference number: 2 (lower is better)
Translates to: QPLISCPGVPRADVYVCICSQLL*IQFQEE
Trigger: TTCCTCTTGAAACTGGATTCAAAGTAACTGTGAGCA...GATACAAACGTACACGTCTGCTCTTGGGACGCCTGGGCAGCTGATCAGAGGTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023561.8
ENSMUST00000232263.2
3UTR-3UTR TCA 90 bp TCAGAGCCAAGTACTAATCTCTCTCCAAAGGCTCAGTGGGGCTGGAGTGGGGCATGCTCACAGTTACTTTaGATCCAGTTTCAAGAGGAA +
Preference number: 2 (lower is better)
Translates to: SEPSTNLSPKAQWGWSGACSQLL*IQFQEE
Trigger: TTCCTCTTGAAACTGGATTCAAAGTAACTGTGAGCA...TGCCCCACTCCAGCCCCACTGAGCCTTTGGAGAGAGATTAGTACTTGGCTCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000023561.8
ENSMUST00000231798.2
ENSMUST00000232263.2
3UTR-3UTR TCA 90 bp GAGGTCTTCCGTTCTTCTGTCCTTCTCTTTGCTCGGGAAGTTCTTTTCCTTTATGTTGTTCTGACGCCATaGTTCTGCTCCTCCACCCAG +
Preference number: 2 (lower is better)
Translates to: EVFRSSVLLFAREVLFLYVVLTP*FCSSTQ
Trigger: CTGGGTGGAGGAGCAGAATCATGGCGTCAGAACAAC...ATAAAGGAAAAGAACTTCCCGAGCAAAGAGAAGGACAGAAGAACGGAAGACCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000231724.2
ENSMUST00000231798.2
ENSMUST00000232679.2
3UTR-3UTR GCA 90 bp AGCAGTGGGAAAAGGGCACTGCCCAATGAGAGAGTGAATTCGTGTGAACACACAGTTTCAGCATGCTGCTaGAGGATCCAGAACTCATCA +
Preference number: 2 (lower is better)
Translates to: SSGKRALPNERVNSCEHTVSACC*RIQNSS
Trigger: TGATGAGTTCTGGATCCTGCAGCAGCATGCTGAAAC...TGTGTGTTCACACGAATTCACTCTCTCATTGGGCAGTGCCCTTTTCCCACTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000231798.2
3UTR-3UTR CCA 90 bp CACTCCAGCATTAGAGAAGCTAGCGAACACCTCCTTCCTCCCCCTGCTGATATCATTATAAAAGAGCAGTaGGAAAAGGGCACTGCCCAA +
Preference number: 2 (lower is better)
Translates to: HSSIREASEHLLPPPADIIIKEQ*EKGTAQ
Trigger: TTGGGCAGTGCCCTTTTCCCACTGCTCTTTTATAAT...GATATCAGCAGGGGGAGGAAGGAGGTGTTCGCTAGCTTCTCTAATGCTGGAGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000023561.8
ENSMUST00000231798.2
ENSMUST00000232263.2
3UTR-3UTR TCA 90 bp CACCACCAGGCTCCAATGTACCTTCCGATGAATAGGTACCAGAACAAGTTCTTGTGCCCAATGAGAGAGTaGATTCGTGTGAACACACAG +
Preference number: 2 (lower is better)
Translates to: HHQAPMYLPMNRYQNKFLCPMRE*IRVNTQ
Trigger: CTGTGTGTTCACACGAATTCACTCTCTCATTGGGCA...CAAGAACTTGTTCTGGTACCTATTCATCGGAAGGTACATTGGAGCCTGGTGGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000231798.2
ENSMUST00000232263.2
ENSMUST00000232679.2
3UTR-3UTR TCA 90 bp AAGAGAAATGATCGGGGACTTTTTAACCCACAATGCATGAGGTATATGGAAACAGTTAGACCAGCTGCCTaGTCCCGGCATCACTGGCAC +
Preference number: 2 (lower is better)
Translates to: KRNDRGLFNPQCMRYMETVRPAA*SRHHWH
Trigger: GTGCCAGTGATGCCGGGATCAGGCAGCTGGTCTAAC...TGTTTCCATATACCTCATGCATTGTGGGTTAAAAAGTCCCCGATCATTTCTCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000023561.8
ENSMUST00000232263.2
3UTR-3UTR GCA 90 bp ATCTCTCTCCAAAGGCTCAGTGGGGCTGGAGTGGGGCATGCTGATGAGCCAAGACTTTTTAACCCACAATaGATGAGGTATATGGAAACA +
Preference number: 2 (lower is better)
Translates to: ISLQRLSGAGVGHADEPRLFNPQ*MRYMET
Trigger: TGTTTCCATATACCTCATGCATTGTGGGTTAAAAAG...TCTTGGCTCATCAGCATGCCCCACTCCAGCCCCACTGAGCCTTTGGAGAGAGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000023561.8
ENSMUST00000231798.2
ENSMUST00000232263.2
3UTR-3UTR GCA 90 bp GTTCGAAGAGATTTACCCCTTTGGTCCATCTTTTCACTGCTTGGTAACCTCCAGGTGGAGAGGCCTTCATaGACTCTTGAGAGCTCAGTA +
Preference number: 2 (lower is better)
Translates to: VRRDLPLWSIFSLLGNLQVERPS*TLESSV
Trigger: TACTGAGCTCTCAAGAGTGCATGAAGGCCTCTCCAC...CTGGAGGTTACCAAGCAGTGAAAAGATGGACCAAAGGGGTAAATCTCTTCGAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000231724.2
ENSMUST00000231798.2
ENSMUST00000232263.2
ENSMUST00000232679.2
3UTR-3UTR GCA 90 bp ATTTGGTGTCCTCTTGTACCTTCCTTTTCAAATCGGAGTCCCACCACCTTCTCTTACCCAGTTTCAGCATaGTGCTGCAGGATCCAGAAC +
Preference number: 2 (lower is better)
Translates to: IWCPLVPSFSNRSPTTFSYPVSA*CCRIQN
Trigger: GTTCTGGATCCTGCAGCAGCATGCTGAAACTGGGTA...AGAGAAGGTGGTGGGACTCCGATTTGAAAAGGAAGGTACAAGAGGACACCAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000231724.2
ENSMUST00000231798.2
3UTR-3UTR GCA 90 bp CTACAACCTCTGATCAGCTGCCCAGGCGTCCCAAGAGCAGACGTGTACGTTTGTACTGAATGCATGAAGTaGTGGATAACCTTGCTTTTT +
Preference number: 2 (lower is better)
Translates to: LQPLISCPGVPRADVYVCTECMK*WITLLF
Trigger: AAAAAGCAAGGTTATCCAGCACTTCATGCATTCAGT...ACAAACGTACACGTCTGCTCTTGGGACGCCTGGGCAGCTGATCAGAGGTTGTAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000232263.2
3UTR-3UTR GCA 90 bp TCAGAGCCAAGTACTAATCTCTCTCCAAAGGCTCAGTGGGGCTGGAGTGGGGCACACATAATGCAACAGTaGATACAGAAGAGAAAACAC +
Preference number: 2 (lower is better)
Translates to: SEPSTNLSPKAQWGWSGAHIMQQ*IQKRKH
Trigger: GTGTTTTCTCTTCTGTATGCACTGTTGCATTATGTG...TGCCCCACTCCAGCCCCACTGAGCCTTTGGAGAGAGATTAGTACTTGGCTCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000232263.2
3UTR-3UTR CCA 90 bp TTGCTTCCACTTCCTAGACGAAGTCGGGCAGACACTTCTTCTGACAGATCAGGCGGTTTTGTGGTCAGCTaGAACGGGAATCCAAATAAA +
Preference number: 2 (lower is better)
Translates to: LLPLPRRSRADTSSDRSGGFVVS*NGNPNK
Trigger: TTTATTTGGATTCCCGTTCCAGCTGACCACAAAACC...GCCTGATCTGTCAGAAGAAGTGTCTGCCCGACTTCGTCTAGGAAGTGGAAGCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000231724.2
3UTR-3UTR CCA 90 bp GTTCTTGTTCGAAGAGATTTACCCCTTTGGTCCATCTTTTCACTGCTTGGTAACTCATCTGGTGGGCCGTaGCCCAGGGCATTACTGATT +
Preference number: 2 (lower is better)
Translates to: VLVRRDLPLWSIFSLLGNSSGGP*PRALLI
Trigger: AATCAGTAATGCCCTGGGCCACGGCCCACCAGATGA...GTTACCAAGCAGTGAAAAGATGGACCAAAGGGGTAAATCTCTTCGAACAAGAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000231724.2
ENSMUST00000231798.2
ENSMUST00000232263.2
ENSMUST00000232679.2
3UTR-3UTR CCA 90 bp AGGGCCATTGTGGAGAGGCCTTCATGCACTCTTGAGAGCTCAGTACCTGTGAGAAGAGATTTACCCCTTTaGTCCATCTTTTCACTGCTT +
Preference number: 2 (lower is better)
Translates to: RAIVERPSCTLESSVPVRRDLPL*SIFSLL
Trigger: AAGCAGTGAAAAGATGGACCAAAGGGGTAAATCTCT...TCTCACAGGTACTGAGCTCTCAAGAGTGCATGAAGGCCTCTCCACAATGGCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000231724.2
ENSMUST00000231798.2
ENSMUST00000232263.2
ENSMUST00000232679.2
3UTR-3UTR CCA 90 bp AAACATCCATCAAAGAACCACCAGCAGCTAGAAGACCAGGCGGGGCATTGTCACATCTCACAGATCCTGTaGCCTTTTTGTCCCATAGAA +
Preference number: 2 (lower is better)
Translates to: KHPSKNHQQLEDQAGHCHISQIL*PFCPIE
Trigger: TTCTATGGGACAAAAAGGCCACAGGATCTGTGAGAT...GTGACAATGCCCCGCCTGGTCTTCTAGCTGCTGGTGGTTCTTTGATGGATGTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000231724.2
ENSMUST00000231798.2
ENSMUST00000232263.2
ENSMUST00000232679.2
3UTR-3UTR TCA 90 bp GGTACCAGAACAAGTTCTTGTTCGAAGAGATTTACCCCTTTGGTCCATCTTTTCAATAGTCCAGGGCTCTaGGCAGGCACAGCCTTAGAA +
Preference number: 2 (lower is better)
Translates to: GTRTSSCSKRFTPLVHLFNSPGL*AGTALE
Trigger: TTCTAAGGCTGTGCCTGCTCAGAGCCCTGGACTATT...GAAAAGATGGACCAAAGGGGTAAATCTCTTCGAACAAGAACTTGTTCTGGTACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000231798.2
ENSMUST00000232263.2
ENSMUST00000232679.2
3UTR-3UTR TCA 90 bp TTGCTTCCACTTCCTAGACGAAGTCGGGCAGACACTTCTTCTGACAGATCAGGCGAGAGTGAATTCGTGTaGACACACAGAACAATTCAT +
Preference number: 2 (lower is better)
Translates to: LLPLPRRSRADTSSDRSGESEFV*THRTIH
Trigger: ATGAATTGTTCTGTGTGTTCACACGAATTCACTCTC...GCCTGATCTGTCAGAAGAAGTGTCTGCCCGACTTCGTCTAGGAAGTGGAAGCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000231798.2
ENSMUST00000232263.2
ENSMUST00000232679.2
3UTR-3UTR TCA 90 bp CACTGGGGATCAAACTCTGGTCAGGTAGCTATTTTGTTTGATAGGCCGGGATCAAAAATAGGCTTCCATTaGGGAGCATCTTCAGAGCAG +
Preference number: 2 (lower is better)
Translates to: HWGSNSGQVAILFDRPGSKIGFH*GASSEQ
Trigger: CTGCTCTGAAGATGCTCCTCAATGGAAGCCTATTTT...TGATCCCGGCCTATCAAACAAAATAGCTACCTGACCAGAGTTTGATCCCCAGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000023561.8
ENSMUST00000232263.2
3UTR-3UTR TCA 90 bp CATTCAACTGCTGAGGAATCTCATGTGGCTTCATGCTGTAGTGGGTCCACTCTAAAAATAGGCTTCCATTaGGGAGCATCTTCAGAGCAG +
Preference number: 2 (lower is better)
Translates to: HSTAEESHVASCCSGSTLKIGFH*GASSEQ
Trigger: CTGCTCTGAAGATGCTCCTCAATGGAAGCCTATTTT...TAGAGTGGACCCACTACAGCATGAAGCCACATGAGATTCCTCAGCAGTTGAATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000231798.2
ENSMUST00000232263.2
3UTR-3UTR TCA 90 bp CCAATGTACCTTCCGATGAATAGGTACCAGAACAAGTTCTTGTTCGAAGAGATTGTTGTTCTGACGCCATaGTTCTGCTCCTCCACCCAG +
Preference number: 2 (lower is better)
Translates to: PMYLPMNRYQNKFLFEEIVVLTP*FCSSTQ
Trigger: CTGGGTGGAGGAGCAGAATCATGGCGTCAGAACAAC...AATCTCTTCGAACAAGAACTTGTTCTGGTACCTATTCATCGGAAGGTACATTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000231724.2
ENSMUST00000231798.2
ENSMUST00000232679.2
3UTR-3UTR GCA 90 bp CAACCTCTGATCAGCTGCCCAGGCGTCCCAAGAGCAGACGTGTACGTTTGTATCATATACTCTAGGTTCTaGCAGTCTTTTATTACGTCA +
Preference number: 2 (lower is better)
Translates to: QPLISCPGVPRADVYVCIIYSRF*QSFITS
Trigger: TGACGTAATAAAAGACTGGCAGAACCTAGAGTATAT...GATACAAACGTACACGTCTGCTCTTGGGACGCCTGGGCAGCTGATCAGAGGTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000023561.8
ENSMUST00000232263.2
3UTR-3UTR GCA 90 bp AAGAGGTCTTCCGTTCTTCTGTCCTTCTCTTTGCTCGGGAAGTTCTTTTCCTTTTACCCAGTTTCAGCATaGTGCTGCAGGATCCAGAAC +
Preference number: 2 (lower is better)
Translates to: KRSSVLLSFSLLGKFFSFYPVSA*CCRIQN
Trigger: GTTCTGGATCCTGCAGCAGCATGCTGAAACTGGGTA...AAAGGAAAAGAACTTCCCGAGCAAAGAGAAGGACAGAAGAACGGAAGACCTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000231724.2
ENSMUST00000231798.2
3UTR-3UTR GCA 90 bp AAACATCCATCAAAGAACCACCAGCAGCTAGAAGACCAGGCGGGGCATTGTCACGAAGAATGTACTGAATaGATGAAGTGCTGGATAACC +
Preference number: 2 (lower is better)
Translates to: KHPSKNHQQLEDQAGHCHEECTE*MKCWIT
Trigger: GGTTATCCAGCACTTCATGCATTCAGTACATTCTTC...GTGACAATGCCCCGCCTGGTCTTCTAGCTGCTGGTGGTTCTTTGATGGATGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000231724.2
ENSMUST00000231798.2
ENSMUST00000232263.2
ENSMUST00000232679.2
3UTR-3UTR CCA 90 bp TCCATCAAAGAACCACCAGCAGCTAGAAGACCAGGCGGGGCATTGTCACAGCAATGTCACTCTGATCTTTaGATAGTCGCTTATTCCATT +
Preference number: 2 (lower is better)
Translates to: SIKEPPAARRPGGALSQQCHSDL*IVAYSI
Trigger: AATGGAATAAGCGACTATCCAAAGATCAGAGTGACA...TTGCTGTGACAATGCCCCGCCTGGTCTTCTAGCTGCTGGTGGTTCTTTGATGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000231724.2
ENSMUST00000231798.2
3UTR-3UTR CCA 90 bp GTGCTGAGTGAATGTGATAGGTTTGTCCCTAGAAATATAATCTGCATATTTACATCCTCCACGGTGCAGTaGGGACGCCTCACACCCTTG +
Preference number: 2 (lower is better)
Translates to: VLSECDRFVPRNIICIFTSSTVQ*GRLTPL
Trigger: CAAGGGTGTGAGGCGTCCCCACTGCACCGTGGAGGA...TGTAAATATGCAGATTATATTTCTAGGGACAAACCTATCACATTCACTCAGCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000231724.2
ENSMUST00000231798.2
ENSMUST00000232679.2
3UTR-3UTR TCA 90 bp TCCTTTTCAAATCGGAGTCCCACCACCTTCTCTGTATCAGCTTTCCCTTTTGAAGGGTCACTGTCACTCTaGTCTTTGGATAGTCGCTTA +
Preference number: 2 (lower is better)
Translates to: SFSNRSPTTFSVSAFPFEGSLSL*SLDSRL
Trigger: TAAGCGACTATCCAAAGATCAGAGTGACAGTGACCC...TTCAAAAGGGAAAGCTGATACAGAGAAGGTGGTGGGACTCCGATTTGAAAAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000231724.2
ENSMUST00000231798.2
3UTR-3UTR TCA 90 bp ATGTCCTCTGTAAATTCAAAGAGGTCTTCCGTTCTTCTGTCCTTCTCTTTGCTCGTCACACCTTGCTCCTaGGGCTTCCATGTTAAGGAA +
Preference number: 2 (lower is better)
Translates to: MSSVNSKRSSVLLSFSLLVTPCS*GFHVKE
Trigger: TTCCTTAACATGGAAGCCTCAGGAGCAAGGTGTGAC...GAGCAAAGAGAAGGACAGAAGAACGGAAGACCTCTTTGAATTTACAGAGGACAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000231724.2
ENSMUST00000231798.2
ENSMUST00000232679.2
3UTR-3UTR TCA 90 bp CCAATGTACCTTCCGATGAATAGGTACCAGAACAAGTTCTTGTTCGAAGAGATTGGGAACGTGCTTCCATaGGCACCTTCTTTAAGTCGC +
Preference number: 2 (lower is better)
Translates to: PMYLPMNRYQNKFLFEEIGNVLP*APSLSR
Trigger: GCGACTTAAAGAAGGTGCTCATGGAAGCACGTTCCC...AATCTCTTCGAACAAGAACTTGTTCTGGTACCTATTCATCGGAAGGTACATTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000231724.2
ENSMUST00000231798.2
ENSMUST00000232679.2
3UTR-3UTR TCA 90 bp AACTCTATACTGTTTTGGAACAAAATGGGTTGTTCTGACGCCATGATTCTGCTCGGGAACGTGCTTCCATaGGCACCTTCTTTAAGTCGC +
Preference number: 2 (lower is better)
Translates to: NSILFWNKMGCSDAMILLGNVLP*APSLSR
Trigger: GCGACTTAAAGAAGGTGCTCATGGAAGCACGTTCCC...GAGCAGAATCATGGCGTCAGAACAACCCATTTTGTTCCAAAACAGTATAGAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000231724.2
ENSMUST00000231798.2
ENSMUST00000232679.2
3UTR-3UTR TCA 90 bp AAGAGAAATGATCGGGGACTTTTTAACCCACAATGCATGAGGTATATGGAAACACACAGCAACTGCTGGTaGAGGATCTCCCACACCATC +
Preference number: 2 (lower is better)
Translates to: KRNDRGLFNPQCMRYMETHSNCW*RISHTI
Trigger: GATGGTGTGGGAGATCCTTCACCAGCAGTTGCTGTG...TGTTTCCATATACCTCATGCATTGTGGGTTAAAAAGTCCCCGATCATTTCTCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000231724.2
ENSMUST00000231798.2
ENSMUST00000232263.2
ENSMUST00000232679.2
3UTR-3UTR GCA 90 bp GAAGAGATTTACCCCTTTGGTCCATCTTTTCACTGCTTGGTAACCTCCAGACTTGTTTCAGCATGCTGCTaGAGGATCCAGAACTCATCA +
Preference number: 2 (lower is better)
Translates to: EEIYPFGPSFHCLVTSRLVSACC*RIQNSS
Trigger: TGATGAGTTCTGGATCCTGCAGCAGCATGCTGAAAC...AAGTCTGGAGGTTACCAAGCAGTGAAAAGATGGACCAAAGGGGTAAATCTCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000231724.2
ENSMUST00000231798.2
3UTR-3UTR CCA 90 bp CCTCTTCAGAAATCATCTCTGTCACACCTTGCTCCTGAGGCTTCCATGTTAAGGATTATAAAAGAGCAGTaGGAAAAGGGCACTGCCCAA +
Preference number: 2 (lower is better)
Translates to: PLQKSSLSHLAPEASMLRIIKEQ*EKGTAQ
Trigger: TTGGGCAGTGCCCTTTTCCCACTGCTCTTTTATAAT...CCTTAACATGGAAGCCTCAGGAGCAAGGTGTGACAGAGATGATTTCTGAAGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000231798.2
ENSMUST00000232679.2
3UTR-3UTR CCA 90 bp ATGCATGAAGTGCTGGATAACCTTGCTTTTTACTCCTTTCCACTAAAAGATTCATCAGTGGGGCTGGAGTaGGGCATGCTGATGAGCCAA +
Preference number: 2 (lower is better)
Translates to: MHEVLDNLAFYSFPLKDSSVGLE*GMLMSQ
Trigger: TTGGCTCATCAGCATGCCCCACTCCAGCCCCACTGA...TGAATCTTTTAGTGGAAAGGAGTAAAAAGCAAGGTTATCCAGCACTTCATGCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000231798.2
ENSMUST00000232263.2
3UTR-3UTR CCA 90 bp GCGGGTCACTGTCACTCTGATCTTTGGATAGTCGCTTATTCCATTAGGAGATTTAAGCAGAAGACACCATaGGTTTTGTGGTCAGCTGGA +
Preference number: 2 (lower is better)
Translates to: AGHCHSDLWIVAYSIRRFKQKTP*VLWSAG
Trigger: TCCAGCTGACCACAAAACCCATGGTGTCTTCTGCTT...AAATCTCCTAATGGAATAAGCGACTATCCAAAGATCAGAGTGACAGTGACCCGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000231724.2
3UTR-3UTR CCA 90 bp AGCAGTGGGAAAAGGGCACTGCCCAATGAGAGAGTGAATTCGTGTGAACACACAAGAGATTTACCCCTTTaGTCCATCTTTTCACTGCTT +
Preference number: 2 (lower is better)
Translates to: SSGKRALPNERVNSCEHTRDLPL*SIFSLL
Trigger: AAGCAGTGAAAAGATGGACCAAAGGGGTAAATCTCT...TGTGTGTTCACACGAATTCACTCTCTCATTGGGCAGTGCCCTTTTCCCACTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000231798.2
ENSMUST00000232263.2
ENSMUST00000232679.2
3UTR CAA 90 bp CAGGCTCCAATGTACCTTCCGATGAATAGGTACCAGAACAAGTTCTaGTTCGAAGAGATTTACCCCTTTGGTCCATCTTTTCACTGCTTG +
Preference number: 2 (lower is better)
Translates to: QAPMYLPMNRYQNKF*FEEIYPFGPSFHCL
Trigger: CAAGCAGTGAAAAGATGGACCAAAGGGGTAAATCTCTTCGAACAAGAACTTGTTCTGGTACCTATTCATCGGAAGGTACATTGGAGCCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000231724.2
ENSMUST00000231798.2
ENSMUST00000232263.2
ENSMUST00000232679.2
3UTR-3UTR TCA 90 bp AGGCCCAGCTTCCATAACGAAGGTCATTTCAAGTCTCAGAGCAAACAGGTTTCAACAACTTTGGAAGGTTaGGGCAGAGAAAAGAGGAAA +
Preference number: 2 (lower is better)
Translates to: RPSFHNEGHFKSQSKQVSTTLEG*GREKRK
Trigger: TTTCCTCTTTTCTCTGCCTCAACCTTCCAAAGTTGT...TGAAACCTGTTTGCTCTGAGACTTGAAATGACCTTCGTTATGGAAGCTGGGCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000023561.8
ENSMUST00000232263.2
3UTR-3UTR TCA 90 bp ACAGGCCCAGCTTCCATAACGAAGGTCATTTCAAGTCTCAGAGCAAACAGGTTTACAACTTTGGAAGGTTaGGGCAGAGAAAAGAGGAAA +
Preference number: 2 (lower is better)
Translates to: TGPASITKVISSLRANRFTTLEG*GREKRK
Trigger: TTTCCTCTTTTCTCTGCCTCAACCTTCCAAAGTTGT...AAACCTGTTTGCTCTGAGACTTGAAATGACCTTCGTTATGGAAGCTGGGCCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000023561.8
ENSMUST00000232263.2
3UTR-3UTR TCA 90 bp ATGTCCTCTGTAAATTCAAAGAGGTCTTCCGTTCTTCTGTCCTTCTCTTTGCTCGGGTCACTGTCACTCTaGTCTTTGGATAGTCGCTTA +
Preference number: 2 (lower is better)
Translates to: MSSVNSKRSSVLLSFSLLGSLSL*SLDSRL
Trigger: TAAGCGACTATCCAAAGATCAGAGTGACAGTGACCC...GAGCAAAGAGAAGGACAGAAGAACGGAAGACCTCTTTGAATTTACAGAGGACAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000231724.2
ENSMUST00000231798.2
3UTR-3UTR TCA 90 bp ATGCATGAAGTGCTGGATAACCTTGCTTTTTACTCCTTTCCACTAAAAGATTCACTGAGAACTGTGGTGTaGAACCGTGGGAGGGAACGT +
Preference number: 2 (lower is better)
Translates to: MHEVLDNLAFYSFPLKDSLRTVV*NRGRER
Trigger: ACGTTCCCTCCCACGGTTTCACACCACAGTTCTCAG...TGAATCTTTTAGTGGAAAGGAGTAAAAAGCAAGGTTATCCAGCACTTCATGCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000231724.2
ENSMUST00000231798.2
ENSMUST00000232679.2
3UTR-3UTR TCA 90 bp GTTCGAAGAGATTTACCCCTTTGGTCCATCTTTTCACTGCTTGGTAACCTCCAGCTGATATTTTCCTTCTaGGTAAGCCATTGCTTCCAC +
Preference number: 2 (lower is better)
Translates to: VRRDLPLWSIFSLLGNLQLIFSF*VSHCFH
Trigger: GTGGAAGCAATGGCTTACTCAGAAGGAAAATATCAG...CTGGAGGTTACCAAGCAGTGAAAAGATGGACCAAAGGGGTAAATCTCTTCGAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000231724.2
ENSMUST00000231798.2
ENSMUST00000232263.2
ENSMUST00000232679.2
3UTR-3UTR TCA 90 bp CACTGGGGATCAAACTCTGGTCAGGTAGCTATTTTGTTTGATAGGCCGGGATCAGATAGAAGAATGTACTaGATGCATGAAGTGCTGGAT +
Preference number: 2 (lower is better)
Translates to: HWGSNSGQVAILFDRPGSDRRMY*MHEVLD
Trigger: ATCCAGCACTTCATGCATTCAGTACATTCTTCTATC...TGATCCCGGCCTATCAAACAAAATAGCTACCTGACCAGAGTTTGATCCCCAGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000232263.2
3UTR-3UTR TCA 90 bp GTACCAGAACAAGTTCTTGTTCGAAGAGATTTACCCCTTTGGTCCATCTTTTCATACTGCACAGCCCACTaGCATGCAGATTTAGGGTCT +
Preference number: 2 (lower is better)
Translates to: VPEQVLVRRDLPLWSIFSYCTAH*HADLGS
Trigger: AGACCCTAAATCTGCATGTCAGTGGGCTGTGCAGTA...TGAAAAGATGGACCAAAGGGGTAAATCTCTTCGAACAAGAACTTGTTCTGGTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000232263.2
3UTR-3UTR GCA 90 bp AGTCCCCATCACAGGCCCAGCTTCCATAACGAAGGTCATTTCAAGTCTCAGAGCTCATATAACAGATCCTaGATTTCCCACATTCATATG +
Preference number: 2 (lower is better)
Translates to: SPHHRPSFHNEGHFKSQSSYNRS*ISHIHM
Trigger: CATATGAATGTGGGAAATGCAGGATCTGTTATATGA...GCTCTGAGACTTGAAATGACCTTCGTTATGGAAGCTGGGCCTGTGATGGGGACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000023561.8
ENSMUST00000232263.2
3UTR-3UTR GCA 90 bp TGCTTCCACTTCCTAGACGAAGTCGGGCAGACACTTCTTCTGACAGATCAGGCTTCATATAACAGATCCTaGATTTCCCACATTCATATG +
Preference number: 2 (lower is better)
Translates to: CFHFLDEVGQTLLLTDQASYNRS*ISHIHM
Trigger: CATATGAATGTGGGAAATGCAGGATCTGTTATATGA...AGCCTGATCTGTCAGAAGAAGTGTCTGCCCGACTTCGTCTAGGAAGTGGAAGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000231798.2
ENSMUST00000232263.2
ENSMUST00000232679.2
3UTR-3UTR GCA 90 bp GTTCTTGTTCGAAGAGATTTACCCCTTTGGTCCATCTTTTCACTGCTTGGTAACAGGAACTCTCTGGATTaGTTTTGCTATGGCGACGAC +
Preference number: 2 (lower is better)
Translates to: VLVRRDLPLWSIFSLLGNRNSLD*FCYGDD
Trigger: GTCGTCGCCATAGCAAAAGCAATCCAGAGAGTTCCT...GTTACCAAGCAGTGAAAAGATGGACCAAAGGGGTAAATCTCTTCGAACAAGAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000231724.2
ENSMUST00000231798.2
ENSMUST00000232679.2
3UTR-3UTR CCA 90 bp CCATTTGGTGTCCTCTTGTACCTTCCTTTTCAAATCGGAGTCCCACCACCTTCTGGAATCCAAATAAACTaGCAGCATTGTAGAGACTGT +
Preference number: 2 (lower is better)
Translates to: PFGVLLYLPFQIGVPPPSGIQIN*QHCRDC
Trigger: ACAGTCTCTACAATGCTGCCAGTTTATTTGGATTCC...AGAAGGTGGTGGGACTCCGATTTGAAAAGGAAGGTACAAGAGGACACCAAATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000231724.2
3UTR CAA 90 bp TTTTCCTTTATCTCAAGCACTGATATTTTCCTTCTGAGTAAGCCATaGCTTCCACTTCCTAGACGAAGTCGGGCAGACACTTCTTCTGAC +
Preference number: 2 (lower is better)
Translates to: FSFISSTDIFLLSKP*LPLPRRSRADTSSD
Trigger: GTCAGAAGAAGTGTCTGCCCGACTTCGTCTAGGAAGTGGAAGCAATGGCTTACTCAGAAGGAAAATATCAGTGCTTGAGATAAAGGAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000231724.2
ENSMUST00000231798.2
ENSMUST00000232263.2
ENSMUST00000232679.2
3UTR-3UTR TCA 90 bp GTTCGAAGAGATTTACCCCTTTGGTCCATCTTTTCACTGCTTGGTAACCTCCAGGAGAGTGAATTCGTGTaGACACACAGAACAATTCAT +
Preference number: 2 (lower is better)
Translates to: VRRDLPLWSIFSLLGNLQESEFV*THRTIH
Trigger: ATGAATTGTTCTGTGTGTTCACACGAATTCACTCTC...CTGGAGGTTACCAAGCAGTGAAAAGATGGACCAAAGGGGTAAATCTCTTCGAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000231798.2
ENSMUST00000232263.2
ENSMUST00000232679.2
3UTR-3UTR TCA 90 bp TTGAATCCAGTTTCAAGAGGAAGCCAAGCTACTTCGGTTCTAGAAAAGAAAGTCTGCCCAATGAGAGAGTaGATTCGTGTGAACACACAG +
Preference number: 2 (lower is better)
Translates to: LNPVSRGSQATSVLEKKVCPMRE*IRVNTQ
Trigger: CTGTGTGTTCACACGAATTCACTCTCTCATTGGGCA...GACTTTCTTTTCTAGAACCGAAGTAGCTTGGCTTCCTCTTGAAACTGGATTCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000023561.8
ENSMUST00000231798.2
ENSMUST00000232263.2
3UTR-3UTR TCA 90 bp AAGAGAAATGATCGGGGACTTTTTAACCCACAATGCATGAGGTATATGGAAACAGTCACACCTTGCTCCTaGGGCTTCCATGTTAAGGAA +
Preference number: 2 (lower is better)
Translates to: KRNDRGLFNPQCMRYMETVTPCS*GFHVKE
Trigger: TTCCTTAACATGGAAGCCTCAGGAGCAAGGTGTGAC...TGTTTCCATATACCTCATGCATTGTGGGTTAAAAAGTCCCCGATCATTTCTCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000231724.2
ENSMUST00000231798.2
ENSMUST00000232679.2
3UTR-3UTR TCA 90 bp GTGCTGAGTGAATGTGATAGGTTTGTCCCTAGAAATATAATCTGCATATTTACACTGAGAACTGTGGTGTaGAACCGTGGGAGGGAACGT +
Preference number: 2 (lower is better)
Translates to: VLSECDRFVPRNIICIFTLRTVV*NRGRER
Trigger: ACGTTCCCTCCCACGGTTTCACACCACAGTTCTCAG...TGTAAATATGCAGATTATATTTCTAGGGACAAACCTATCACATTCACTCAGCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000231724.2
ENSMUST00000231798.2
ENSMUST00000232679.2
3UTR-3UTR TCA 90 bp AAGAGAAATGATCGGGGACTTTTTAACCCACAATGCATGAGGTATATGGAAACAGGCAGACACTTCTTCTaGCAGATCAGGCTCCATTTG +
Preference number: 2 (lower is better)
Translates to: KRNDRGLFNPQCMRYMETGRHFF*QIRLHL
Trigger: CAAATGGAGCCTGATCTGTCAGAAGAAGTGTCTGCC...TGTTTCCATATACCTCATGCATTGTGGGTTAAAAAGTCCCCGATCATTTCTCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000231724.2
ENSMUST00000231798.2
ENSMUST00000232263.2
ENSMUST00000232679.2
3UTR-3UTR CCA 90 bp AAGAGGTCTTCCGTTCTTCTGTCCTTCTCTTTGCTCGGGAAGTTCTTTTCCTTTATTATAAAAGAGCAGTaGGAAAAGGGCACTGCCCAA +
Preference number: 2 (lower is better)
Translates to: KRSSVLLSFSLLGKFFSFIIKEQ*EKGTAQ
Trigger: TTGGGCAGTGCCCTTTTCCCACTGCTCTTTTATAAT...AAAGGAAAAGAACTTCCCGAGCAAAGAGAAGGACAGAAGAACGGAAGACCTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000231798.2
ENSMUST00000232263.2
ENSMUST00000232679.2
3UTR-3UTR CCA 90 bp CATTCAACTGCTGAGGAATCTCATGTGGCTTCATGCTGTAGTGGGTCCACTCTAGAATGCATGAAGTGCTaGATAACCTTGCTTTTTACT +
Preference number: 2 (lower is better)
Translates to: HSTAEESHVASCCSGSTLECMKC*ITLLFT
Trigger: AGTAAAAAGCAAGGTTATCCAGCACTTCATGCATTC...TAGAGTGGACCCACTACAGCATGAAGCCACATGAGATTCCTCAGCAGTTGAATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000231724.2
ENSMUST00000231798.2
ENSMUST00000232263.2
ENSMUST00000232679.2
3UTR-3UTR CCA 90 bp ACAGGCCCAGCTTCCATAACGAAGGTCATTTCAAGTCTCAGAGCAAACAGGTTTAGAGATTTACCCCTTTaGTCCATCTTTTCACTGCTT +
Preference number: 2 (lower is better)
Translates to: TGPASITKVISSLRANRFRDLPL*SIFSLL
Trigger: AAGCAGTGAAAAGATGGACCAAAGGGGTAAATCTCT...AAACCTGTTTGCTCTGAGACTTGAAATGACCTTCGTTATGGAAGCTGGGCCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000232263.2
3UTR-3UTR GCA 90 bp CACTGGGGATCAAACTCTGGTCAGGTAGCTATTTTGTTTGATAGGCCGGGATCACTTTTTAACCCACAATaGATGAGGTATATGGAAACA +
Preference number: 2 (lower is better)
Translates to: HWGSNSGQVAILFDRPGSLFNPQ*MRYMET
Trigger: TGTTTCCATATACCTCATGCATTGTGGGTTAAAAAG...TGATCCCGGCCTATCAAACAAAATAGCTACCTGACCAGAGTTTGATCCCCAGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000023561.8
ENSMUST00000232263.2
3UTR-3UTR GCA 90 bp CATTTGGTGTCCTCTTGTACCTTCCTTTTCAAATCGGAGTCCCACCACCTTCTCCTTTTTAACCCACAATaGATGAGGTATATGGAAACA +
Preference number: 2 (lower is better)
Translates to: HLVSSCTFLFKSESHHLLLFNPQ*MRYMET
Trigger: TGTTTCCATATACCTCATGCATTGTGGGTTAAAAAG...GAGAAGGTGGTGGGACTCCGATTTGAAAAGGAAGGTACAAGAGGACACCAAATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000231724.2
ENSMUST00000231798.2
ENSMUST00000232679.2
3UTR-3UTR GCA 90 bp CATTCAACTGCTGAGGAATCTCATGTGGCTTCATGCTGTAGTGGGTCCACTCTAATATACTCTAGGTTCTaGCAGTCTTTTATTACGTCA +
Preference number: 2 (lower is better)
Translates to: HSTAEESHVASCCSGSTLIYSRF*QSFITS
Trigger: TGACGTAATAAAAGACTGGCAGAACCTAGAGTATAT...TAGAGTGGACCCACTACAGCATGAAGCCACATGAGATTCCTCAGCAGTTGAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000232263.2
3UTR-3UTR GCA 90 bp ACAGGCCCAGCTTCCATAACGAAGGTCATTTCAAGTCTCAGAGCAAACAGGTTTTCATATAACAGATCCTaGATTTCCCACATTCATATG +
Preference number: 2 (lower is better)
Translates to: TGPASITKVISSLRANRFSYNRS*ISHIHM
Trigger: CATATGAATGTGGGAAATGCAGGATCTGTTATATGA...AAACCTGTTTGCTCTGAGACTTGAAATGACCTTCGTTATGGAAGCTGGGCCTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000023561.8
ENSMUST00000232263.2
3UTR-3UTR GCA 90 bp GTTCGAAGAGATTTACCCCTTTGGTCCATCTTTTCACTGCTTGGTAACCTCCAGTCATATAACAGATCCTaGATTTCCCACATTCATATG +
Preference number: 2 (lower is better)
Translates to: VRRDLPLWSIFSLLGNLQSYNRS*ISHIHM
Trigger: CATATGAATGTGGGAAATGCAGGATCTGTTATATGA...CTGGAGGTTACCAAGCAGTGAAAAGATGGACCAAAGGGGTAAATCTCTTCGAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000231798.2
ENSMUST00000232263.2
ENSMUST00000232679.2
3UTR-3UTR CCA 90 bp TTCCGTTCTTCTGTCCTTCTCTTTGCTCGGGAAGTTCTTTTCCTTTATCTCAAGTATGGAACTCCACATTaGGTAGTGAATACGTGCATA +
Preference number: 2 (lower is better)
Translates to: FRSSVLLFAREVLFLYLKYGTPH*VVNTCI
Trigger: TATGCACGTATTCACTACCCAATGTGGAGTTCCATA...CTTGAGATAAAGGAAAAGAACTTCCCGAGCAAAGAGAAGGACAGAAGAACGGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000232263.2
3UTR-3UTR TCA 90 bp AAGAGAAATGATCGGGGACTTTTTAACCCACAATGCATGAGGTATATGGAAACACTGATATTTTCCTTCTaGGTAAGCCATTGCTTCCAC +
Preference number: 2 (lower is better)
Translates to: KRNDRGLFNPQCMRYMETLIFSF*VSHCFH
Trigger: GTGGAAGCAATGGCTTACTCAGAAGGAAAATATCAG...TGTTTCCATATACCTCATGCATTGTGGGTTAAAAAGTCCCCGATCATTTCTCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000231724.2
ENSMUST00000231798.2
ENSMUST00000232263.2
ENSMUST00000232679.2
3UTR-3UTR GCA 90 bp AAGAGAAATGATCGGGGACTTTTTAACCCACAATGCATGAGGTATATGGAAACACTAGGCACTAGATCTTaGAAAATGTGCTCTGACCAA +
Preference number: 2 (lower is better)
Translates to: KRNDRGLFNPQCMRYMETLGTRS*KMCSDQ
Trigger: TTGGTCAGAGCACATTTTGCAAGATCTAGTGCCTAG...TGTTTCCATATACCTCATGCATTGTGGGTTAAAAAGTCCCCGATCATTTCTCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000023561.8
ENSMUST00000231798.2
ENSMUST00000232263.2
3UTR-3UTR CCA 90 bp TATTCTTCTCATAAGCTCAATGTAACAGTTCTGTTACCCGTGCGCACACAGGTGCATCGTCATTTCTTCTaGCATTTTCAAGCCTTAAAA +
Preference number: 2 (lower is better)
Translates to: YSSHKLNVTVLLPVRTQVHRHFF*HFQALK
Trigger: TTTTAAGGCTTGAAAATGCCAGAAGAAATGACGATG...CACCTGTGTGCGCACGGGTAACAGAACTGTTACATTGAGCTTATGAGAAGAATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000023561.8
3UTR-3UTR TCA 90 bp TTTCATCCTGTAAATACTGAAGAAGAATCTCACAGATCCTGTGGCCTTTTTGTCGAGAGTGAATTCGTGTaGACACACAGAACAATTCAT +
Preference number: 2 (lower is better)
Translates to: FHPVNTEEESHRSCGLFVESEFV*THRTIH
Trigger: ATGAATTGTTCTGTGTGTTCACACGAATTCACTCTC...GACAAAAAGGCCACAGGATCTGTGAGATTCTTCTTCAGTATTTACAGGATGAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000231798.2
ENSMUST00000232263.2
ENSMUST00000232679.2
3UTR-3UTR GCA 90 bp CGTCATTTCTTCTGGCATTTTCAAGCCTTAAAAGAGAGAACCTTAACTGTATGTCTAGGCACTAGATCTTaGAAAATGTGCTCTGACCAA +
Preference number: 2 (lower is better)
Translates to: RHFFWHFQALKERTLTVCLGTRS*KMCSDQ
Trigger: TTGGTCAGAGCACATTTTGCAAGATCTAGTGCCTAG...ACATACAGTTAAGGTTCTCTCTTTTAAGGCTTGAAAATGCCAGAAGAAATGACG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000023561.8
ENSMUST00000231798.2
ENSMUST00000232263.2
3UTR-3UTR CCA 90 bp CGTCATTTCTTCTGGCATTTTCAAGCCTTAAAAGAGAGAACCTTAACTGTATGTATTATAAAAGAGCAGTaGGAAAAGGGCACTGCCCAA +
Preference number: 2 (lower is better)
Translates to: RHFFWHFQALKERTLTVCIIKEQ*EKGTAQ
Trigger: TTGGGCAGTGCCCTTTTCCCACTGCTCTTTTATAAT...ACATACAGTTAAGGTTCTCTCTTTTAAGGCTTGAAAATGCCAGAAGAAATGACG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENSMUST00000023561.8
ENSMUST00000231798.2
ENSMUST00000232263.2
3UTR-3UTR TCA 90 bp CGTCATTTCTTCTGGCATTTTCAAGCCTTAAAAGAGAGAACCTTAACTGTATGTGAGAGTGAATTCGTGTaGACACACAGAACAATTCAT +
Preference number: 2 (lower is better)
Translates to: RHFFWHFQALKERTLTVCESEFV*THRTIH
Trigger: ATGAATTGTTCTGTGTGTTCACACGAATTCACTCTC...ACATACAGTTAAGGTTCTCTCTTTTAAGGCTTGAAAATGCCAGAAGAAATGACG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000023561.8
ENSMUST00000231798.2
ENSMUST00000232263.2
3UTR-3UTR TCA 90 bp GTGCTGAGTGAATGTGATAGGTTTGTCCCTAGAAATATAATCTGCATATTTACATCCACTCTAAGAGGTTaGGATCTGTATTTCTTTTGG +
Preference number: 2 (lower is better)
Translates to: VLSECDRFVPRNIICIFTSTLRG*DLYFFW
Trigger: CCAAAAGAAATACAGATCTCAACCTCTTAGAGTGGA...TGTAAATATGCAGATTATATTTCTAGGGACAAACCTATCACATTCACTCAGCAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000231724.2
ENSMUST00000231798.2
ENSMUST00000232263.2
ENSMUST00000232679.2
3UTR-3UTR GCA 90 bp TTTCATCCTGTAAATACTGAAGAAGAATCTCACAGATCCTGTGGCCTTTTTGTCCTTTTTAACCCACAATaGATGAGGTATATGGAAACA +
Preference number: 2 (lower is better)
Translates to: FHPVNTEEESHRSCGLFVLFNPQ*MRYMET
Trigger: TGTTTCCATATACCTCATGCATTGTGGGTTAAAAAG...GACAAAAAGGCCACAGGATCTGTGAGATTCTTCTTCAGTATTTACAGGATGAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENSMUST00000231724.2
ENSMUST00000231798.2
ENSMUST00000232263.2
ENSMUST00000232679.2
3UTR-3UTR GCA 90 bp AAGAGAAATGATCGGGGACTTTTTAACCCACAATGCATGAGGTATATGGAAACATGGGTAGTGAATACGTaGATAAAGATATACTGGATA +
Preference number: 2 (lower is better)
Translates to: KRNDRGLFNPQCMRYMETWVVNT*IKIYWI
Trigger: TATCCAGTATATCTTTATGCACGTATTCACTACCCA...TGTTTCCATATACCTCATGCATTGTGGGTTAAAAAGTCCCCGATCATTTCTCTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000232263.2
3UTR-3UTR GCA 90 bp TTTGAATACCTCTTTTCACTTCTCATTGAACAGAGAGGTCCTCTTGTTTCAACACTTTTTAACCCACAATaGATGAGGTATATGGAAACA +
Preference number: 2 (lower is better)
Translates to: FEYLFSLLIEQRGPLVSTLFNPQ*MRYMET
Trigger: TGTTTCCATATACCTCATGCATTGTGGGTTAAAAAG...TGTTGAAACAAGAGGACCTCTCTGTTCAATGAGAAGTGAAAAGAGGTATTCAAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000231724.2
ENSMUST00000231798.2
ENSMUST00000232679.2
3UTR-3UTR CAA 90 bp CCCGTGCGCACACAGGTGACAGAGAGCTGGGGCTTCTGGTACCTTAGCTTGGATCCACCTGGTCTCGGGTaGGCTCAGCCATTTCAGTCC +
Preference number: 3 (lower is better)
Translates to: PVRTQVTESWGFWYLSLDPPGLG*AQPFQS
Trigger: GGACTGAAATGGCTGAGCCAACCCGAGACCAGGTGG...ATCCAAGCTAAGGTACCAGAAGCCCCAGCTCTCTGTCACCTGTGTGCGCACGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000023561.8
3UTR CCA 72 bp TGCTCGCTTTCAGGTTTAGGCCACCTGGTCTCGGGTTaGCTCAGCCATTTCAGTCCCCATCACAGGCCCAGC +
Preference number: 3 (lower is better)
Translates to: CSLSGLGHLVSG*LSHFSPHHRPS
Trigger: GCTGGGCCTGTGATGGGGACTGAAATGGCTGAGCCAACCCGAGACCAGGTGGCCTAAACCTGAAAGCGAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000023561.8
ENSMUST00000232263.2
3UTR TCA 72 bp CTTCAGAGCAGACAGCTCAGGCCAGCCCTTCCCTGGTaGGGCTCACACACTCACTCACCAGACCTACGACTT +
Preference number: 3 (lower is better)
Translates to: LQSRQLRPALPW*GSHTHSPDLRL
Trigger: AAGTCGTAGGTCTGGTGAGTGAGTGTGTGAGCCTCACCAGGGAAGGGCTGGCCTGAGCTGTCTGCTCTGAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000023561.8
ENSMUST00000231798.2
ENSMUST00000232263.2
3UTR GCA 72 bp CTCTTCCTGCTCCTCCCAGGAAGGATCTACCGACCCTaGCTCTCCCCACTGGGAACTGGGATTACAGATGTG +
Preference number: 3 (lower is better)
Translates to: LFLLLPGRIYRP*LSPLGTGITDV
Trigger: CACATCTGTAATCCCAGTTCCCAGTGGGGAGAGGCAGGGTCGGTAGATCCTTCCTGGGAGGAGCAGGAAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000023561.8
3UTR CCA 72 bp CTTTCATCCTTTTGGACACCCTCCTCCACGGTGCAGTaGGGACGCCTCACACCCTTGCCACCCTCTTCAGAA +
Preference number: 3 (lower is better)
Translates to: LSSFWTPSSTVQ*GRLTPLPPSSE
Trigger: TTCTGAAGAGGGTGGCAAGGGTGTGAGGCGTCCCCACTGCACCGTGGAGGAGGGTGTCCAAAAGGATGAAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000231724.2
ENSMUST00000231798.2
ENSMUST00000232679.2
3UTR TCA 72 bp CCTGCCTCTCCCCACTGGGAACTGGGATTACAGATGTaGGCAGGGATCCAGCTTGTTACAGACACACCTGGC +
Preference number: 3 (lower is better)
Translates to: PASPHWELGLQM*AGIQLVTDTPG
Trigger: GCCAGGTGTGTCTGTAACAAGCTGGATCCCTGCTCACATCTGTAATCCCAGTTCCCAGTGGGGAGAGGCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000023561.8
3UTR-3UTR CAA 90 bp CCACCAGCAGCTAGAAGACCAGGCGGGGCATTGTCACAGCAACTGCTGGTGAAGCAGATCAGGCTCCATTaGGTGTCCTCTTGTACCTTC +
Preference number: 3 (lower is better)
Translates to: PPAARRPGGALSQQLLVKQIRLH*VSSCTF
Trigger: GAAGGTACAAGAGGACACCAAATGGAGCCTGATCTG...CTTCACCAGCAGTTGCTGTGACAATGCCCCGCCTGGTCTTCTAGCTGCTGGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000231724.2
ENSMUST00000231798.2
ENSMUST00000232679.2
3UTR GCA 72 bp GCACACCCGGGTGGCGAGCTTGAGGACACCTTCAAATaGCACATTAGCTATAGCATCACTCACCTGGGGAGA +
Preference number: 3 (lower is better)
Translates to: AHPGGELEDTFK*HISYSITHLGR
Trigger: TCTCCCCAGGTGAGTGATGCTATAGCTAATGTGGCATTTGAAGGTGTCCTCAAGCTCGCCACCCGGGTGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000023561.8
3UTR GCA 72 bp ACATGGGAGAGGGAAGTTGTTCTCCATCACTCTTCCTaGTCCTCCCAGGAAGGATCTACCGACCCTGCCTCT +
Preference number: 3 (lower is better)
Translates to: TWEREVVLHHSS*SSQEGSTDPAS
Trigger: AGAGGCAGGGTCGGTAGATCCTTCCTGGGAGGAGCAGGAAGAGTGATGGAGAACAACTTCCCTCTCCCATGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000023561.8
3UTR CCA 72 bp CCCGTGCGCACACAGGTGACAGAGAGCTGGGGCTTCTaGTACCTTAGCTTGGATTCAGACACTCAGGTAAAG +
Preference number: 3 (lower is better)
Translates to: PVRTQVTESWGF*YLSLDSDTQVK
Trigger: CTTTACCTGAGTGTCTGAATCCAAGCTAAGGTACCAGAAGCCCCAGCTCTCTGTCACCTGTGTGCGCACGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000023561.8
3UTR-3UTR CAA 90 bp TGCTTCCACTTCCTAGACGAAGTCGGGCAGACACTTCTTCTGACAGATCAGGCTGGACGCCTCACACCCTaGCCACCCTCTTCAGAAATC +
Preference number: 3 (lower is better)
Translates to: CFHFLDEVGQTLLLTDQAGRLTP*PPSSEI
Trigger: GATTTCTGAAGAGGGTGGCAAGGGTGTGAGGCGTCC...AGCCTGATCTGTCAGAAGAAGTGTCTGCCCGACTTCGTCTAGGAAGTGGAAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000231724.2
ENSMUST00000231798.2
ENSMUST00000232679.2
3UTR CCA 72 bp AAGGATCTACCGACCCTGCCTCTCCCCACTGGGAACTaGGATTACAGATGTGAGCAGGGATCCAGCTTGTTA +
Preference number: 3 (lower is better)
Translates to: KDLPTLPLPTGN*DYRCEQGSSLL
Trigger: TAACAAGCTGGATCCCTGCTCACATCTGTAATCCCAGTTCCCAGTGGGGAGAGGCAGGGTCGGTAGATCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000023561.8
3UTR CCA 72 bp TTTCAGCGTAAAACCAAAGGAGGGCAGGACTCTCCGTaGCTGATCGCGGGTCACTGTCACTCTGATCTTTGG +
Preference number: 3 (lower is better)
Translates to: FQRKTKGGQDSP*LIAGHCHSDLW
Trigger: CCAAAGATCAGAGTGACAGTGACCCGCGATCAGCCACGGAGAGTCCTGCCCTCCTTTGGTTTTACGCTGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000231724.2
ENSMUST00000231798.2
ENSMUST00000232679.2
3UTR TCA 72 bp GCTGCTGCAGGATCCAGAACTCATCAGCTCACAAGATaGAGAGTTCGAAAAGACCTCTCCAGAAGGGGCCAC +
Preference number: 3 (lower is better)
Translates to: AAAGSRTHQLTR*RVRKDLSRRGH
Trigger: GTGGCCCCTTCTGGAGAGGTCTTTTCGAACTCTTCATCTTGTGAGCTGATGAGTTCTGGATCCTGCAGCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000231724.2
ENSMUST00000231798.2
3UTR GCA 72 bp ACACCTCTAGTCAGGGCCATTGTGGAGAGGCCTTCATaGACTCTTGAGAGCTCAGTACCTGTGAGAGAAGAG +
Preference number: 3 (lower is better)
Translates to: TPLVRAIVERPS*TLESSVPVREE
Trigger: CTCTTCTCTCACAGGTACTGAGCTCTCAAGAGTGCATGAAGGCCTCTCCACAATGGCCCTGACTAGAGGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000023561.8
ENSMUST00000231724.2
ENSMUST00000231798.2
ENSMUST00000232263.2
ENSMUST00000232679.2
3UTR GCA 72 bp GCAAACAGGTTTCAACAGCTACAACCTCTGATCAGCTaGCCAGGCGTCCCAAGAGCAGACGTGTACGTTTGT +
Preference number: 3 (lower is better)
Translates to: ANRFQQLQPLIS*PGVPRADVYVC
Trigger: ACAAACGTACACGTCTGCTCTTGGGACGCCTGGGCAGCTGATCAGAGGTTGTAGCTGTTGAAACCTGTTTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023561.8
ENSMUST00000232263.2
3UTR-3UTR CAA 90 bp TCAGGCCAGCCCTTCCCTGGTGAGGCTCACACACTCACTCACCAGACCTACGACATGCTCACAGTTACTTaGAATCCAGTTTCAAGAGGA +
Preference number: 3 (lower is better)
Translates to: SGQPFPGEAHTLTHQTYDMLTVT*NPVSRG
Trigger: TCCTCTTGAAACTGGATTCAAAGTAACTGTGAGCAT...GTCGTAGGTCTGGTGAGTGAGTGTGTGAGCCTCACCAGGGAAGGGCTGGCCTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000023561.8
ENSMUST00000231798.2
ENSMUST00000232263.2
3UTR-3UTR CAA 90 bp TCCTCCCAGGAAGGATCTACCGACCCTGCCTCTCCCCACTGGGAACTGGGATTAAAAAATAGGCTTCCATaGAGGAGCATCTTCAGAGCA +
Preference number: 3 (lower is better)
Translates to: SSQEGSTDPASPHWELGLKNRLP*RSIFRA
Trigger: TGCTCTGAAGATGCTCCTCAATGGAAGCCTATTTTT...TAATCCCAGTTCCCAGTGGGGAGAGGCAGGGTCGGTAGATCCTTCCTGGGAGGA
52% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000023561.8
3UTR-3UTR CAA 90 bp TCCATCAAAGAACCACCAGCAGCTAGAAGACCAGGCGGGGCATTGTCACAGCAACTCTCTGGATTGCTTTaGCTATGGCGACGACCACTT +
Preference number: 3 (lower is better)
Translates to: SIKEPPAARRPGGALSQQLSGLL*LWRRPL
Trigger: AAGTGGTCGTCGCCATAGCAAAAGCAATCCAGAGAG...TTGCTGTGACAATGCCCCGCCTGGTCTTCTAGCTGCTGGTGGTTCTTTGATGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000231724.2
ENSMUST00000231798.2
ENSMUST00000232679.2
3UTR-3UTR CAA 90 bp TCCATCAAAGAACCACCAGCAGCTAGAAGACCAGGCGGGGCATTGTCACAGCAATTCTCTTTCATCCTTTaGGACACCCTCCTCCACGGT +
Preference number: 3 (lower is better)
Translates to: SIKEPPAARRPGGALSQQFSFIL*DTLLHG
Trigger: ACCGTGGAGGAGGGTGTCCAAAAGGATGAAAGAGAA...TTGCTGTGACAATGCCCCGCCTGGTCTTCTAGCTGCTGGTGGTTCTTTGATGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000231724.2
ENSMUST00000231798.2
ENSMUST00000232679.2
3UTR-3UTR CAA 90 bp TCCATCAAAGAACCACCAGCAGCTAGAAGACCAGGCGGGGCATTGTCACAGCAATCCTCCACCCAGCCTTaGGTCTTTAATGTGTCCATC +
Preference number: 3 (lower is better)
Translates to: SIKEPPAARRPGGALSQQSSTQP*VFNVSI
Trigger: GATGGACACATTAAAGACCAAAGGCTGGGTGGAGGA...TTGCTGTGACAATGCCCCGCCTGGTCTTCTAGCTGCTGGTGGTTCTTTGATGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000231724.2
ENSMUST00000231798.2
ENSMUST00000232679.2
3UTR-3UTR CAA 90 bp CCACCAGCAGCTAGAAGACCAGGCGGGGCATTGTCACAGCAACTGCTGGTGAAGCCATTTGGTGTCCTCTaGTACCTTCCTTTTCAAATC +
Preference number: 3 (lower is better)
Translates to: PPAARRPGGALSQQLLVKPFGVL*YLPFQI
Trigger: GATTTGAAAAGGAAGGTACAAGAGGACACCAAATGG...CTTCACCAGCAGTTGCTGTGACAATGCCCCGCCTGGTCTTCTAGCTGCTGGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000231724.2
ENSMUST00000231798.2
ENSMUST00000232679.2
3UTR-3UTR CAA 90 bp TCAAAGAACCACCAGCAGCTAGAAGACCAGGCGGGGCATTGTCACAGCAACTGCCTTCTGTCCTTCTCTTaGCTCGGGAAGTTCTTTTCC +
Preference number: 3 (lower is better)
Translates to: SKNHQQLEDQAGHCHSNCLLSFS*LGKFFS
Trigger: GGAAAAGAACTTCCCGAGCAAAGAGAAGGACAGAAG...GCAGTTGCTGTGACAATGCCCCGCCTGGTCTTCTAGCTGCTGGTGGTTCTTTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000231724.2
ENSMUST00000231798.2
ENSMUST00000232263.2
ENSMUST00000232679.2
3UTR-3UTR CAA 90 bp TCAGGCCAGCCCTTCCCTGGTGAGGCTCACACACTCACTCACCAGACCTACGACTCTTTCTCTCTCTTTTaGTACCAGAACAACTTTGGA +
Preference number: 3 (lower is better)
Translates to: SGQPFPGEAHTLTHQTYDSFSLF*YQNNFG
Trigger: TCCAAAGTTGTTCTGGTACAAAAAGAGAGAGAAAGA...GTCGTAGGTCTGGTGAGTGAGTGTGTGAGCCTCACCAGGGAAGGGCTGGCCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000023561.8
ENSMUST00000232263.2
3UTR-3UTR CAA 90 bp TGCTTCCACTTCCTAGACGAAGTCGGGCAGACACTTCTTCTGACAGATCAGGCTCTCTCTGGATTGCTTTaGCTATGGCGACGACCACTT +
Preference number: 3 (lower is better)
Translates to: CFHFLDEVGQTLLLTDQALSGLL*LWRRPL
Trigger: AAGTGGTCGTCGCCATAGCAAAAGCAATCCAGAGAG...AGCCTGATCTGTCAGAAGAAGTGTCTGCCCGACTTCGTCTAGGAAGTGGAAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000231724.2
ENSMUST00000231798.2
ENSMUST00000232679.2
3UTR-3UTR CAA 90 bp AAACATCCATCAAAGAACCACCAGCAGCTAGAAGACCAGGCGGGGCATTGTCACCGGGTGATTCGCAACTaGAAAGCGCTGCTCAAAATC +
Preference number: 3 (lower is better)
Translates to: KHPSKNHQQLEDQAGHCHRVIRN*KALLKI
Trigger: GATTTTGAGCAGCGCTTTCAAGTTGCGAATCACCCG...GTGACAATGCCCCGCCTGGTCTTCTAGCTGCTGGTGGTTCTTTGATGGATGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000231724.2
ENSMUST00000231798.2
ENSMUST00000232263.2
ENSMUST00000232679.2
3UTR-3UTR CAA 90 bp AGCAGTGGGAAAAGGGCACTGCCCAATGAGAGAGTGAATTCGTGTGAACACACACAGATCAGGCTCCATTaGGTGTCCTCTTGTCTGACC +
Preference number: 3 (lower is better)
Translates to: SSGKRALPNERVNSCEHTQIRLH*VSSCLT
Trigger: GGTCAGACAAGAGGACACCAAATGGAGCCTGATCTG...TGTGTGTTCACACGAATTCACTCTCTCATTGGGCAGTGCCCTTTTCCCACTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000232263.2
3UTR CCA 72 bp TTACAGACACACCTGGCTGAGACTAAAAGTCAATCCTaGCCTCACCACCCAACCATCTGTCTCTCCAGGTTC +
Preference number: 3 (lower is better)
Translates to: LQTHLAETKSQS*PHHPTICLSRF
Trigger: GAACCTGGAGAGACAGATGGTTGGGTGGTGAGGCCAGGATTGACTTTTAGTCTCAGCCAGGTGTGTCTGTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000023561.8
3UTR CCA 72 bp TTGAAAGCGCTGCTCAAAATCTCATCTGGTGGGCCGTaGCCCAGGGCATTACTGATTTCCTTTTCCATGTCC +
Preference number: 3 (lower is better)
Translates to: LKALLKISSGGP*PRALLISFSMS
Trigger: GGACATGGAAAAGGAAATCAGTAATGCCCTGGGCCACGGCCCACCAGATGAGATTTTGAGCAGCGCTTTCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000231724.2
ENSMUST00000231798.2
ENSMUST00000232263.2
ENSMUST00000232679.2
3UTR CCA 72 bp TCGCAACTTGAAAGCGCTGCTCAAAATCTCATCTGGTaGGCCGTGGCCCAGGGCATTACTGATTTCCTTTTC +
Preference number: 3 (lower is better)
Translates to: SQLESAAQNLIW*AVAQGITDFLF
Trigger: GAAAAGGAAATCAGTAATGCCCTGGGCCACGGCCCACCAGATGAGATTTTGAGCAGCGCTTTCAAGTTGCGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000231724.2
ENSMUST00000231798.2
ENSMUST00000232263.2
ENSMUST00000232679.2
3UTR CCA 72 bp GATTCGCAACTTGAAAGCGCTGCTCAAAATCTCATCTaGTGGGCCGTGGCCCAGGGCATTACTGATTTCCTT +
Preference number: 3 (lower is better)
Translates to: DSQLESAAQNLI*WAVAQGITDFL
Trigger: AAGGAAATCAGTAATGCCCTGGGCCACGGCCCACCAGATGAGATTTTGAGCAGCGCTTTCAAGTTGCGAATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000231724.2
ENSMUST00000231798.2
ENSMUST00000232263.2
ENSMUST00000232679.2
3UTR-3UTR CAA 90 bp ATCTCTCTCCAAAGGCTCAGTGGGGCTGGAGTGGGGCATGCTGATGAGCCAAGAATGCTCACAGTTACTTaGAATCCAGTTTCAAGAGGA +
Preference number: 3 (lower is better)
Translates to: ISLQRLSGAGVGHADEPRMLTVT*NPVSRG
Trigger: TCCTCTTGAAACTGGATTCAAAGTAACTGTGAGCAT...TCTTGGCTCATCAGCATGCCCCACTCCAGCCCCACTGAGCCTTTGGAGAGAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000023561.8
ENSMUST00000231798.2
ENSMUST00000232263.2
3UTR TCA 72 bp TACTGTGTGTGCACAGGAATGTGGTGGATGCGCTTATaGGCAGACATGGGAGAGGGAAGTTGTTCTCCATCA +
Preference number: 3 (lower is better)
Translates to: YCVCTGMWWMRL*ADMGEGSCSPS
Trigger: TGATGGAGAACAACTTCCCTCTCCCATGTCTGCTCATAAGCGCATCCACCACATTCCTGTGCACACACAGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000023561.8
3UTR TCA 72 bp CTGTGGTGTGAAACCGTGGGAGGGAACGTGCTTCCATaGGCACCTTCTTTAAGTCGCTCCAATAACTTTCGA +
Preference number: 3 (lower is better)
Translates to: LWCETVGGNVLP*APSLSRSNNFR
Trigger: TCGAAAGTTATTGGAGCGACTTAAAGAAGGTGCTCATGGAAGCACGTTCCCTCCCACGGTTTCACACCACAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000231724.2
ENSMUST00000231798.2
ENSMUST00000232679.2
3UTR GCA 72 bp GCTCCTGAGGCTTCCATGTTAAGGAACTCTCTGGATTaGTTTTGCTATGGCGACGACCACTTGGCCTTCTAT +
Preference number: 3 (lower is better)
Translates to: APEASMLRNSLD*FCYGDDHLAFY
Trigger: ATAGAAGGCCAAGTGGTCGTCGCCATAGCAAAAGCAATCCAGAGAGTTCCTTAACATGGAAGCCTCAGGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000231724.2
ENSMUST00000231798.2
ENSMUST00000232679.2
3UTR-3UTR CAA 90 bp CCTCTTCAGAAATCATCTCTGTCACACCTTGCTCCTGAGGCTTCCATGTTAAGGCTCTCTGGATTGCTTTaGCTATGGCGACGACCACTT +
Preference number: 3 (lower is better)
Translates to: PLQKSSLSHLAPEASMLRLSGLL*LWRRPL
Trigger: AAGTGGTCGTCGCCATAGCAAAAGCAATCCAGAGAG...CCTTAACATGGAAGCCTCAGGAGCAAGGTGTGACAGAGATGATTTCTGAAGAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000231724.2
ENSMUST00000231798.2
ENSMUST00000232679.2
3UTR-3UTR CAA 90 bp ATTTGGTGTCCTCTTGTACCTTCCTTTTCAAATCGGAGTCCCACCACCTTCTCTCATCTCTGTCACACCTaGCTCCTGAGGCTTCCATGT +
Preference number: 3 (lower is better)
Translates to: IWCPLVPSFSNRSPTTFSHLCHT*LLRLPC
Trigger: ACATGGAAGCCTCAGGAGCAAGGTGTGACAGAGATG...AGAGAAGGTGGTGGGACTCCGATTTGAAAAGGAAGGTACAAGAGGACACCAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000231724.2
ENSMUST00000231798.2
ENSMUST00000232679.2
3UTR-3UTR CAA 90 bp AGGGCCATTGTGGAGAGGCCTTCATGCACTCTTGAGAGCTCAGTACCTGTGAGATCTTTTCACTTCTCATaGAACAGAGAGGTCCTCTTG +
Preference number: 3 (lower is better)
Translates to: RAIVERPSCTLESSVPVRSFHFS*NREVLL
Trigger: CAAGAGGACCTCTCTGTTCAATGAGAAGTGAAAAGA...TCTCACAGGTACTGAGCTCTCAAGAGTGCATGAAGGCCTCTCCACAATGGCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000231724.2
ENSMUST00000231798.2
ENSMUST00000232679.2
3UTR-3UTR CAA 90 bp AGGCTAAATAAAGGAAGGGGTCCCTGTGTAGTCTGCCTTGAGGAGGTTACAACACGGGTGATTCGCAACTaGAAAGCGCTGCTCAAAATC +
Preference number: 3 (lower is better)
Translates to: RLNKGRGPCVVCLEEVTTRVIRN*KALLKI
Trigger: GATTTTGAGCAGCGCTTTCAAGTTGCGAATCACCCG...TGTTGTAACCTCCTCAAGGCAGACTACACAGGGACCCCTTCCTTTATTTAGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000232263.2
3UTR TCA 72 bp CATTTGTTCTTGTATGGGGTGAATAGTCCAGGGCTCTaGGCAGGCACAGCCTTAGAAACAGGGTTTCAAGCA +
Preference number: 3 (lower is better)
Translates to: HLFLYGVNSPGL*AGTALETGFQA
Trigger: TGCTTGAAACCCTGTTTCTAAGGCTGTGCCTGCTCAGAGCCCTGGACTATTCACCCCATACAAGAACAAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000023561.8
ENSMUST00000231798.2
ENSMUST00000232263.2
ENSMUST00000232679.2
3UTR-3UTR CAA 90 bp TTCGCCCTCCAGTGTGGGCACTGGGGATCAAACTCTGGTCAGGTAGCTATTTTGATGCTCACAGTTACTTaGAATCCAGTTTCAAGAGGA +
Preference number: 3 (lower is better)
Translates to: FALQCGHWGSNSGQVAILMLTVT*NPVSRG
Trigger: TCCTCTTGAAACTGGATTCAAAGTAACTGTGAGCAT...CAAAATAGCTACCTGACCAGAGTTTGATCCCCAGTGCCCACACTGGAGGGCGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000023561.8
ENSMUST00000232263.2
3UTR-3UTR CAA 90 bp GGTACCAGAACAAGTTCTTGTTCGAAGAGATTTACCCCTTTGGTCCATCTTTTCCATCTCTGTCACACCTaGCTCCTGAGGCTTCCATGT +
Preference number: 3 (lower is better)
Translates to: GTRTSSCSKRFTPLVHLFHLCHT*LLRLPC
Trigger: ACATGGAAGCCTCAGGAGCAAGGTGTGACAGAGATG...GAAAAGATGGACCAAAGGGGTAAATCTCTTCGAACAAGAACTTGTTCTGGTACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000231724.2
ENSMUST00000231798.2
ENSMUST00000232679.2
3UTR-3UTR CAA 90 bp CTTGTTCGAAGAGATTTACCCCTTTGGTCCATCTTTTCACTGCTTGGTAACCTCTTCTCTTTCATCCTTTaGGACACCCTCCTCCACGGT +
Preference number: 3 (lower is better)
Translates to: LVRRDLPLWSIFSLLGNLFSFIL*DTLLHG
Trigger: ACCGTGGAGGAGGGTGTCCAAAAGGATGAAAGAGAA...GAGGTTACCAAGCAGTGAAAAGATGGACCAAAGGGGTAAATCTCTTCGAACAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000231724.2
ENSMUST00000231798.2
ENSMUST00000232679.2
3UTR-3UTR CAA 90 bp GTTCGAAGAGATTTACCCCTTTGGTCCATCTTTTCACTGCTTGGTAACCTCCAGCTTCTGAGTAAGCCATaGCTTCCACTTCCTAGACGA +
Preference number: 3 (lower is better)
Translates to: VRRDLPLWSIFSLLGNLQLLSKP*LPLPRR
Trigger: TCGTCTAGGAAGTGGAAGCAATGGCTTACTCAGAAG...CTGGAGGTTACCAAGCAGTGAAAAGATGGACCAAAGGGGTAAATCTCTTCGAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000231724.2
ENSMUST00000231798.2
ENSMUST00000232263.2
ENSMUST00000232679.2
3UTR-3UTR CAA 90 bp ACAGGCCCAGCTTCCATAACGAAGGTCATTTCAAGTCTCAGAGCAAACAGGTTTCTTCTGTCCTTCTCTTaGCTCGGGAAGTTCTTTTCC +
Preference number: 3 (lower is better)
Translates to: TGPASITKVISSLRANRFLLSFS*LGKFFS
Trigger: GGAAAAGAACTTCCCGAGCAAAGAGAAGGACAGAAG...AAACCTGTTTGCTCTGAGACTTGAAATGACCTTCGTTATGGAAGCTGGGCCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000232263.2
3UTR TCA 72 bp AGAGGCCTTCATGCACTCTTGAGAGCTCAGTACCTGTaGGAGAAGAGAAATGATCGGGGACTTTTTAACCCA +
Preference number: 3 (lower is better)
Translates to: RGLHALLRAQYL*EKRNDRGLFNP
Trigger: TGGGTTAAAAAGTCCCCGATCATTTCTCTTCTCTCACAGGTACTGAGCTCTCAAGAGTGCATGAAGGCCTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000023561.8
ENSMUST00000231724.2
ENSMUST00000231798.2
ENSMUST00000232263.2
ENSMUST00000232679.2
3UTR TCA 72 bp AGGTCCATCACCACCAGGCTCCAATGTACCTTCCGATaGATAGGTACCAGAACAAGTTCTTGTTCGAAGAGA +
Preference number: 3 (lower is better)
Translates to: RSITTRLQCTFR*IGTRTSSCSKR
Trigger: TCTCTTCGAACAAGAACTTGTTCTGGTACCTATTCATCGGAAGGTACATTGGAGCCTGGTGGTGATGGACCT
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000231724.2
ENSMUST00000231798.2
ENSMUST00000232263.2
ENSMUST00000232679.2
3UTR GCA 72 bp GAGGCTTCCATGTTAAGGAACTCTCTGGATTGCTTTTaGTATGGCGACGACCACTTGGCCTTCTATTATAGC +
Preference number: 3 (lower is better)
Translates to: EASMLRNSLDCF*YGDDHLAFYYS
Trigger: GCTATAATAGAAGGCCAAGTGGTCGTCGCCATAGCAAAAGCAATCCAGAGAGTTCCTTAACATGGAAGCCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000231724.2
ENSMUST00000231798.2
ENSMUST00000232679.2
3UTR CCA 72 bp GTGTTCCATTACAAGCAGAAGACACCATGGGTTTTGTaGTCAGCTGGAACGGGAATCCAAATAAACTGGCAG +
Preference number: 3 (lower is better)
Translates to: VFHYKQKTPWVL*SAGTGIQINWQ
Trigger: CTGCCAGTTTATTTGGATTCCCGTTCCAGCTGACCACAAAACCCATGGTGTCTTCTGCTTGTAATGGAACAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000231724.2
3UTR CCA 72 bp CCACATTCCGTGTTCCATTACAAGCAGAAGACACCATaGGTTTTGTGGTCAGCTGGAACGGGAATCCAAATA +
Preference number: 3 (lower is better)
Translates to: PHSVFHYKQKTP*VLWSAGTGIQI
Trigger: TATTTGGATTCCCGTTCCAGCTGACCACAAAACCCATGGTGTCTTCTGCTTGTAATGGAACACGGAATGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000231724.2
3UTR-3UTR CAA 90 bp AGCAGTGGGAAAAGGGCACTGCCCAATGAGAGAGTGAATTCGTGTGAACACACAGCAGGAAGTGGCAGTTaGATTAACATTCTTTTCAGA +
Preference number: 3 (lower is better)
Translates to: SSGKRALPNERVNSCEHTAGSGS*INILFR
Trigger: TCTGAAAAGAATGTTAATCAAACTGCCACTTCCTGC...TGTGTGTTCACACGAATTCACTCTCTCATTGGGCAGTGCCCTTTTCCCACTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000023561.8
ENSMUST00000231798.2
ENSMUST00000232263.2
ENSMUST00000232679.2
3UTR-3UTR CAA 90 bp TTTGAATACCTCTTTTCACTTCTCATTGAACAGAGAGGTCCTCTTGTTTCAACAGGACGCCTCACACCCTaGCCACCCTCTTCAGAAATC +
Preference number: 3 (lower is better)
Translates to: FEYLFSLLIEQRGPLVSTGRLTP*PPSSEI
Trigger: GATTTCTGAAGAGGGTGGCAAGGGTGTGAGGCGTCC...TGTTGAAACAAGAGGACCTCTCTGTTCAATGAGAAGTGAAAAGAGGTATTCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000231724.2
ENSMUST00000231798.2
ENSMUST00000232679.2
3UTR-3UTR CAA 90 bp GTTCTTGTTCGAAGAGATTTACCCCTTTGGTCCATCTTTTCACTGCTTGGTAACTTCTCTTTCATCCTTTaGGACACCCTCCTCCACGGT +
Preference number: 3 (lower is better)
Translates to: VLVRRDLPLWSIFSLLGNFSFIL*DTLLHG
Trigger: ACCGTGGAGGAGGGTGTCCAAAAGGATGAAAGAGAA...GTTACCAAGCAGTGAAAAGATGGACCAAAGGGGTAAATCTCTTCGAACAAGAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000231724.2
ENSMUST00000231798.2
ENSMUST00000232679.2
3UTR-3UTR CAA 90 bp GTTCTTGTTCGAAGAGATTTACCCCTTTGGTCCATCTTTTCACTGCTTGGTAACCAGATCAGGCTCCATTaGGTGTCCTCTTGTACCTTC +
Preference number: 3 (lower is better)
Translates to: VLVRRDLPLWSIFSLLGNQIRLH*VSSCTF
Trigger: GAAGGTACAAGAGGACACCAAATGGAGCCTGATCTG...GTTACCAAGCAGTGAAAAGATGGACCAAAGGGGTAAATCTCTTCGAACAAGAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000231724.2
ENSMUST00000231798.2
ENSMUST00000232679.2
3UTR-3UTR CAA 90 bp CATTCAACTGCTGAGGAATCTCATGTGGCTTCATGCTGTAGTGGGTCCACTCTATACCAGAACAAGTTCTaGTTCGAAGAGATTTACCCC +
Preference number: 3 (lower is better)
Translates to: HSTAEESHVASCCSGSTLYQNKF*FEEIYP
Trigger: GGGGTAAATCTCTTCGAACAAGAACTTGTTCTGGTA...TAGAGTGGACCCACTACAGCATGAAGCCACATGAGATTCCTCAGCAGTTGAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000231724.2
ENSMUST00000231798.2
ENSMUST00000232263.2
ENSMUST00000232679.2
3UTR CCA 72 bp ACTCTCTGGATTGCTTTTGCTATGGCGACGACCACTTaGCCTTCTATTATAGCCTTCCGATTTCAGCGTAAA +
Preference number: 3 (lower is better)
Translates to: TLWIAFAMATTT*PSIIAFRFQRK
Trigger: TTTACGCTGAAATCGGAAGGCTATAATAGAAGGCCAAGTGGTCGTCGCCATAGCAAAAGCAATCCAGAGAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000231724.2
ENSMUST00000231798.2
ENSMUST00000232679.2
3UTR TCA 72 bp AGAGCAGTGGGAAAAGGGCACTGCCCAATGAGAGAGTaGATTCGTGTGAACACACAGAACAATTCATATAAC +
Preference number: 3 (lower is better)
Translates to: RAVGKGHCPMRE*IRVNTQNNSYN
Trigger: GTTATATGAATTGTTCTGTGTGTTCACACGAATTCACTCTCTCATTGGGCAGTGCCCTTTTCCCACTGCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000023561.8
ENSMUST00000231798.2
ENSMUST00000232263.2
ENSMUST00000232679.2
3UTR-3UTR CAA 90 bp CTTGTTCGAAGAGATTTACCCCTTTGGTCCATCTTTTCACTGCTTGGTAACCTCAAAAATAGGCTTCCATaGAGGAGCATCTTCAGAGCA +
Preference number: 3 (lower is better)
Translates to: LVRRDLPLWSIFSLLGNLKNRLP*RSIFRA
Trigger: TGCTCTGAAGATGCTCCTCAATGGAAGCCTATTTTT...GAGGTTACCAAGCAGTGAAAAGATGGACCAAAGGGGTAAATCTCTTCGAACAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000231798.2
ENSMUST00000232263.2
3UTR-3UTR CAA 90 bp CGTCATTTCTTCTGGCATTTTCAAGCCTTAAAAGAGAGAACCTTAACTGTATGTGGTCTGAGGACAATTTaGGGGAGTCAGTTTTCGCCC +
Preference number: 3 (lower is better)
Translates to: RHFFWHFQALKERTLTVCGLRTI*GSQFSP
Trigger: GGGCGAAAACTGACTCCCCAAAATTGTCCTCAGACC...ACATACAGTTAAGGTTCTCTCTTTTAAGGCTTGAAAATGCCAGAAGAAATGACG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENSMUST00000023561.8
ENSMUST00000232263.2
3UTR-3UTR CAA 90 bp TCCTTTTCAAATCGGAGTCCCACCACCTTCTCTGTATCAGCTTTCCCTTTTGAATCTTTTCACTTCTCATaGAACAGAGAGGTCCTCTTG +
Preference number: 3 (lower is better)
Translates to: SFSNRSPTTFSVSAFPFESFHFS*NREVLL
Trigger: CAAGAGGACCTCTCTGTTCAATGAGAAGTGAAAAGA...TTCAAAAGGGAAAGCTGATACAGAGAAGGTGGTGGGACTCCGATTTGAAAAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000231724.2
ENSMUST00000231798.2
ENSMUST00000232679.2
3UTR-3UTR CAA 90 bp AGGATCCAGAACTCATCAGCTCACAAGATGAAGAGTTCGAAAAGACCTCTCCAGGAGACTGTTCTTCACTaGGTGAATAAAGCAATCTTT +
Preference number: 3 (lower is better)
Translates to: RIQNSSAHKMKSSKRPLQETVLH*VNKAIF
Trigger: AAAGATTGCTTTATTCACCAAGTGAAGAACAGTCTC...CTGGAGAGGTCTTTTCGAACTCTTCATCTTGTGAGCTGATGAGTTCTGGATCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000231724.2
3UTR-3UTR CAA 90 bp AAGAGAAATGATCGGGGACTTTTTAACCCACAATGCATGAGGTATATGGAAACACTTCTGTCCTTCTCTTaGCTCGGGAAGTTCTTTTCC +
Preference number: 3 (lower is better)
Translates to: KRNDRGLFNPQCMRYMETLLSFS*LGKFFS
Trigger: GGAAAAGAACTTCCCGAGCAAAGAGAAGGACAGAAG...TGTTTCCATATACCTCATGCATTGTGGGTTAAAAAGTCCCCGATCATTTCTCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000231724.2
ENSMUST00000231798.2
ENSMUST00000232263.2
ENSMUST00000232679.2
3UTR CCA 72 bp CAGCCAGATCCTACAACAGAGCATCGTCATTTCTTCTaGCATTTTCAAGCCTTAAAAGAGAGAACCTTAACT +
Preference number: 3 (lower is better)
Translates to: QPDPTTEHRHFF*HFQALKERTLT
Trigger: AGTTAAGGTTCTCTCTTTTAAGGCTTGAAAATGCCAGAAGAAATGACGATGCTCTGTTGTAGGATCTGGCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000023561.8
ENSMUST00000231798.2
ENSMUST00000232263.2
3UTR CCA 72 bp GAGAGGTCCTCTTGTTTCAACAACTCTATACTGTTTTaGAACAAAATGGGTTGTTCTGACGCCATGATTCTG +
Preference number: 3 (lower is better)
Translates to: ERSSCFNNSILF*NKMGCSDAMIL
Trigger: CAGAATCATGGCGTCAGAACAACCCATTTTGTTCCAAAACAGTATAGAGTTGTTGAAACAAGAGGACCTCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000231724.2
ENSMUST00000231798.2
ENSMUST00000232679.2
3UTR-3UTR CAA 90 bp ATGTCCTCTGTAAATTCAAAGAGGTCTTCCGTTCTTCTGTCCTTCTCTTTGCTCGCAGGAAGTGGCAGTTaGATTAACATTCTTTTCAGA +
Preference number: 3 (lower is better)
Translates to: MSSVNSKRSSVLLSFSLLAGSGS*INILFR
Trigger: TCTGAAAAGAATGTTAATCAAACTGCCACTTCCTGC...GAGCAAAGAGAAGGACAGAAGAACGGAAGACCTCTTTGAATTTACAGAGGACAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000231798.2
ENSMUST00000232263.2
ENSMUST00000232679.2
3UTR-3UTR CAA 90 bp GTGCTGAGTGAATGTGATAGGTTTGTCCCTAGAAATATAATCTGCATATTTACATCCTCCACCCAGCCTTaGGTCTTTAATGTGTCCATC +
Preference number: 3 (lower is better)
Translates to: VLSECDRFVPRNIICIFTSSTQP*VFNVSI
Trigger: GATGGACACATTAAAGACCAAAGGCTGGGTGGAGGA...TGTAAATATGCAGATTATATTTCTAGGGACAAACCTATCACATTCACTCAGCAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000231724.2
ENSMUST00000231798.2
ENSMUST00000232679.2
3UTR-3UTR CAA 90 bp CTTGTTCGAAGAGATTTACCCCTTTGGTCCATCTTTTCACTGCTTGGTAACCTCCAACTCTATACTGTTTaGGAACAAAATGGGTTGTTC +
Preference number: 3 (lower is better)
Translates to: LVRRDLPLWSIFSLLGNLQLYTV*EQNGLF
Trigger: GAACAACCCATTTTGTTCCAAAACAGTATAGAGTTG...GAGGTTACCAAGCAGTGAAAAGATGGACCAAAGGGGTAAATCTCTTCGAACAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000231724.2
ENSMUST00000231798.2
ENSMUST00000232679.2
3UTR TCA 72 bp TCTTTTCCTTTATCTCAAGCACTGATATTTTCCTTCTaGGTAAGCCATTGCTTCCACTTCCTAGACGAAGTC +
Preference number: 3 (lower is better)
Translates to: SFPLSQALIFSF*VSHCFHFLDEV
Trigger: GACTTCGTCTAGGAAGTGGAAGCAATGGCTTACTCAGAAGGAAAATATCAGTGCTTGAGATAAAGGAAAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000231724.2
ENSMUST00000231798.2
ENSMUST00000232263.2
ENSMUST00000232679.2
3UTR GCA 72 bp GAGAAGAGAAATGATCGGGGACTTTTTAACCCACAATaGATGAGGTATATGGAAACATCCATCAAAGAACCA +
Preference number: 3 (lower is better)
Translates to: EKRNDRGLFNPQ*MRYMETSIKEP
Trigger: TGGTTCTTTGATGGATGTTTCCATATACCTCATGCATTGTGGGTTAAAAAGTCCCCGATCATTTCTCTTCTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000023561.8
ENSMUST00000231724.2
ENSMUST00000231798.2
ENSMUST00000232263.2
ENSMUST00000232679.2
3UTR-3UTR CAA 90 bp GTGCTGAGTGAATGTGATAGGTTTGTCCCTAGAAATATAATCTGCATATTTACATCTTTTCACTTCTCATaGAACAGAGAGGTCCTCTTG +
Preference number: 3 (lower is better)
Translates to: VLSECDRFVPRNIICIFTSFHFS*NREVLL
Trigger: CAAGAGGACCTCTCTGTTCAATGAGAAGTGAAAAGA...TGTAAATATGCAGATTATATTTCTAGGGACAAACCTATCACATTCACTCAGCAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000231724.2
ENSMUST00000231798.2
ENSMUST00000232679.2
3UTR GCA 72 bp TATTACGTCATAAAAGCAACACTAGGCACTAGATCTTaGAAAATGTGCTCTGACCAACTTTCTGAAATTGAC +
Preference number: 3 (lower is better)
Translates to: YYVIKATLGTRS*KMCSDQLSEID
Trigger: GTCAATTTCAGAAAGTTGGTCAGAGCACATTTTGCAAGATCTAGTGCCTAGTGTTGCTTTTATGACGTAATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000023561.8
ENSMUST00000231798.2
ENSMUST00000232263.2
3UTR-3UTR CAA 90 bp GTGCTGAGTGAATGTGATAGGTTTGTCCCTAGAAATATAATCTGCATATTTACACAACTCTATACTGTTTaGGAACAAAATGGGTTGTTC +
Preference number: 3 (lower is better)
Translates to: VLSECDRFVPRNIICIFTQLYTV*EQNGLF
Trigger: GAACAACCCATTTTGTTCCAAAACAGTATAGAGTTG...TGTAAATATGCAGATTATATTTCTAGGGACAAACCTATCACATTCACTCAGCAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000231724.2
ENSMUST00000231798.2
ENSMUST00000232679.2
3UTR GCA 72 bp TTGACAATGCTTGATTTTGTACACATAATGCAACAGTaGATACAGAAGAGAAAACACTGTACAAGTTATGGA +
Preference number: 3 (lower is better)
Translates to: LTMLDFVHIMQQ*IQKRKHCTSYG
Trigger: TCCATAACTTGTACAGTGTTTTCTCTTCTGTATGCACTGTTGCATTATGTGTACAAAATCAAGCATTGTCAA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000232263.2
3UTR CCA 72 bp TATGGAAGAAACTATTTTCTAGTTTTAACTCCACTATaGAACTCCACATTGGGTAGTGAATACGTGCATAAA +
Preference number: 3 (lower is better)
Translates to: YGRNYFLVLTPL*NSTLGSEYVHK
Trigger: TTTATGCACGTATTCACTACCCAATGTGGAGTTCCATAGTGGAGTTAAAACTAGAAAATAGTTTCTTCCATA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000232263.2
CDS-3UTR TCA 90 bp CCACCAGCAGCTAGAAGACCAGGCGGGGCATTGTCACAGCAACTGCTGGTGAAGTGGAGCGCCGCCTCTTaGGTAGGGCGCGGGCCCCGG +
Preference number: 4 (lower is better)
Translates to: PPAARRPGGALSQQLLVKWSAAS*VGRGPR
Trigger: CCGGGGCCCGCGCCCTACTCAAGAGGCGGCGCTCCA...CTTCACCAGCAGTTGCTGTGACAATGCCCCGCCTGGTCTTCTAGCTGCTGGTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000231724.2
ENSMUST00000231798.2
ENSMUST00000232679.2
CDS-3UTR TCA 90 bp CTTCTGAGTAAGCCATTGCTTCCACTTCCTAGACGAAGTCGGGCAGACACTTCTTGGAGCGCCGCCTCTTaGGTAGGGCGCGGGCCCCGG +
Preference number: 4 (lower is better)
Translates to: LLSKPLLPLPRRSRADTSWSAAS*VGRGPR
Trigger: CCGGGGCCCGCGCCCTACTCAAGAGGCGGCGCTCCA...AGAAGTGTCTGCCCGACTTCGTCTAGGAAGTGGAAGCAATGGCTTACTCAGAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000231724.2
ENSMUST00000231798.2
ENSMUST00000232679.2
CDS-3UTR TCA 90 bp TGTTCCATTACAAGCAGAAGACACCATGGGTTTTGTGGTCAGCTGGAACGGGAATGGAGCGCCGCCTCTTaGGTAGGGCGCGGGCCCCGG +
Preference number: 4 (lower is better)
Translates to: CSITSRRHHGFCGQLEREWSAAS*VGRGPR
Trigger: CCGGGGCCCGCGCCCTACTCAAGAGGCGGCGCTCCA...TTCCCGTTCCAGCTGACCACAAAACCCATGGTGTCTTCTGCTTGTAATGGAACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000231724.2
CDS-3UTR CCA 90 bp TCTCGGGTTGGCTCAGCCATTTCAGTCCCCATCACAGGCCCAGCTTCCATAACGTCCTCCACGGTGCAGTaGGGACGCCTCACACCCTTG +
Preference number: 4 (lower is better)
Translates to: SRVGSAISVPITGPASITSSTVQ*GRLTPL
Trigger: CAAGGGTGTGAGGCGTCCCCACTGCACCGTGGAGGA...CGTTATGGAAGCTGGGCCTGTGATGGGGACTGAAATGGCTGAGCCAACCCGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000023561.8
CDS-3UTR CCA 90 bp CAACCTCTGATCAGCTGCCCAGGCGTCCCAAGAGCAGACGTGTACGTTTGTATCGGGCAGGACTCTCCGTaGCTGATCGCGGGTCACTGT +
Preference number: 4 (lower is better)
Translates to: QPLISCPGVPRADVYVCIGQDSP*LIAGHC
Trigger: ACAGTGACCCGCGATCAGCCACGGAGAGTCCTGCCC...GATACAAACGTACACGTCTGCTCTTGGGACGCCTGGGCAGCTGATCAGAGGTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000023561.8
CDS-3UTR TCA 90 bp TCTCGGGTTGGCTCAGCCATTTCAGTCCCCATCACAGGCCCAGCTTCCATAACGCTGAGAACTGTGGTGTaGAACCGTGGGAGGGAACGT +
Preference number: 4 (lower is better)
Translates to: SRVGSAISVPITGPASITLRTVV*NRGRER
Trigger: ACGTTCCCTCCCACGGTTTCACACCACAGTTCTCAG...CGTTATGGAAGCTGGGCCTGTGATGGGGACTGAAATGGCTGAGCCAACCCGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000023561.8
CDS-3UTR CCA 90 bp ATCTCTCTCCAAAGGCTCAGTGGGGCTGGAGTGGGGCATGCTGATGAGCCAAGATCATCTGGTGGGCCGTaGCCCAGGGCATTACTGATT +
Preference number: 4 (lower is better)
Translates to: ISLQRLSGAGVGHADEPRSSGGP*PRALLI
Trigger: AATCAGTAATGCCCTGGGCCACGGCCCACCAGATGA...TCTTGGCTCATCAGCATGCCCCACTCCAGCCCCACTGAGCCTTTGGAGAGAGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000023561.8
3UTR CAA 72 bp AAAGAACCACCAGCAGCTAGAAGACCAGGCGGGGCATaGTCACAGCAACTGCTGGTGAAGGATCTCCCACAC +
Preference number: 4 (lower is better)
Translates to: KEPPAARRPGGA*SQQLLVKDLPH
Trigger: GTGTGGGAGATCCTTCACCAGCAGTTGCTGTGACAATGCCCCGCCTGGTCTTCTAGCTGCTGGTGGTTCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000231724.2
ENSMUST00000231798.2
ENSMUST00000232263.2
ENSMUST00000232679.2
CDS-3UTR TCA 90 bp TCTCGGGTTGGCTCAGCCATTTCAGTCCCCATCACAGGCCCAGCTTCCATAACGGGCAGACACTTCTTCTaGCAGATCAGGCTCCATTTG +
Preference number: 4 (lower is better)
Translates to: SRVGSAISVPITGPASITGRHFF*QIRLHL
Trigger: CAAATGGAGCCTGATCTGTCAGAAGAAGTGTCTGCC...CGTTATGGAAGCTGGGCCTGTGATGGGGACTGAAATGGCTGAGCCAACCCGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000023561.8
CDS-3UTR TCA 90 bp GAGCAGACAGCTCAGGCCAGCCCTTCCCTGGTGAGGCTCACACACTCACTCACCCAATGTACCTTCCGATaGATAGGTACCAGAACAAGT +
Preference number: 4 (lower is better)
Translates to: EQTAQASPSLVRLTHSLTQCTFR*IGTRTS
Trigger: ACTTGTTCTGGTACCTATTCATCGGAAGGTACATTG...GGTGAGTGAGTGTGTGAGCCTCACCAGGGAAGGGCTGGCCTGAGCTGTCTGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000023561.8
CDS-3UTR TCA 90 bp CCAGCATTAGAGAAGCTAGCGAACACCTCCTTCCTCCCCCTGCTGATATCTCTCCACAGCAACTGCTGGTaGAGGATCTCCCACACCATC +
Preference number: 4 (lower is better)
Translates to: PALEKLANTSFLPLLISLHSNCW*RISHTI
Trigger: GATGGTGTGGGAGATCCTTCACCAGCAGTTGCTGTG...GAGAGATATCAGCAGGGGGAGGAAGGAGGTGTTCGCTAGCTTCTCTAATGCTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000023561.8
CDS-3UTR CCA 90 bp GAGCAGACAGCTCAGGCCAGCCCTTCCCTGGTGAGGCTCACACACTCACTCACCATCTCACAGATCCTGTaGCCTTTTTGTCCCATAGAA +
Preference number: 4 (lower is better)
Translates to: EQTAQASPSLVRLTHSLTISQIL*PFCPIE
Trigger: TTCTATGGGACAAAAAGGCCACAGGATCTGTGAGAT...GGTGAGTGAGTGTGTGAGCCTCACCAGGGAAGGGCTGGCCTGAGCTGTCTGCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000023561.8
3UTR CAA 72 bp GTGGATGCGCTTATGAGCAGACATGGGAGAGGGAAGTaGTTCTCCATCACTCTTCCTGCTCCTCCCAGGAAG +
Preference number: 4 (lower is better)
Translates to: VDALMSRHGRGK*FSITLPAPPRK
Trigger: CTTCCTGGGAGGAGCAGGAAGAGTGATGGAGAACAACTTCCCTCTCCCATGTCTGCTCATAAGCGCATCCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000023561.8
CDS-3UTR TCA 90 bp CGTCATTTCTTCTGGCATTTTCAAGCCTTAAAAGAGAGAACCTTAACTGTATGTTGGAGCGCCGCCTCTTaGGTAGGGCGCGGGCCCCGG +
Preference number: 4 (lower is better)
Translates to: RHFFWHFQALKERTLTVCWSAAS*VGRGPR
Trigger: CCGGGGCCCGCGCCCTACTCAAGAGGCGGCGCTCCA...ACATACAGTTAAGGTTCTCTCTTTTAAGGCTTGAAAATGCCAGAAGAAATGACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000023561.8
ENSMUST00000231798.2
CDS-3UTR TCA 90 bp TTCGCCCTCCAGTGTGGGCACTGGGGATCAAACTCTGGTCAGGTAGCTATTTTGGGGAACGTGCTTCCATaGGCACCTTCTTTAAGTCGC +
Preference number: 4 (lower is better)
Translates to: FALQCGHWGSNSGQVAILGNVLP*APSLSR
Trigger: GCGACTTAAAGAAGGTGCTCATGGAAGCACGTTCCC...CAAAATAGCTACCTGACCAGAGTTTGATCCCCAGTGCCCACACTGGAGGGCGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000023561.8
CDS-3UTR GCA 90 bp CACTCCAGCATTAGAGAAGCTAGCGAACACCTCCTTCCTCCCCCTGCTGATATCGACGCCTCACACCCTTaGCACCCTCTTCAGAAATCA +
Preference number: 4 (lower is better)
Translates to: HSSIREASEHLLPPPADIDASHP*HPLQKS
Trigger: TGATTTCTGAAGAGGGTGGCAAGGGTGTGAGGCGTC...GATATCAGCAGGGGGAGGAAGGAGGTGTTCGCTAGCTTCTCTAATGCTGGAGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000023561.8
CDS-3UTR GCA 90 bp CCCGTGCGCACACAGGTGACAGAGAGCTGGGGCTTCTGGTACCTTAGCTTGGATGGTCCATCTTTTCACTaGTTGGTAACCTCCAGACTT +
Preference number: 4 (lower is better)
Translates to: PVRTQVTESWGFWYLSLDGPSFH*LVTSRL
Trigger: AAGTCTGGAGGTTACCAAGCAGTGAAAAGATGGACC...ATCCAAGCTAAGGTACCAGAAGCCCCAGCTCTCTGTCACCTGTGTGCGCACGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000023561.8
3UTR CAA 72 bp CAGGTGACAGAGAGCTGGGGCTTCTGGTACCTTAGCTaGGATTCAGACACTCAGGTAAAGCAGTGCCACCAT +
Preference number: 4 (lower is better)
Translates to: QVTESWGFWYLS*DSDTQVKQCHH
Trigger: ATGGTGGCACTGCTTTACCTGAGTGTCTGAATCCAAGCTAAGGTACCAGAAGCCCCAGCTCTCTGTCACCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000023561.8
CDS-3UTR TCA 90 bp CGACCCTGCCTCTCCCCACTGGGAACTGGGATTACAGATGTGAGCAGGGATCCACTGATATTTTCCTTCTaGGTAAGCCATTGCTTCCAC +
Preference number: 4 (lower is better)
Translates to: RPCLSPLGTGITDVSRDPLIFSF*VSHCFH
Trigger: GTGGAAGCAATGGCTTACTCAGAAGGAAAATATCAG...TGGATCCCTGCTCACATCTGTAATCCCAGTTCCCAGTGGGGAGAGGCAGGGTCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000023561.8
CDS-3UTR GCA 90 bp CTACAACCTCTGATCAGCTGCCCAGGCGTCCCAAGAGCAGACGTGTACGTTTGTTCTCATGTGGCTTCATaGTGTAGTGGGTCCACTCTA +
Preference number: 4 (lower is better)
Translates to: LQPLISCPGVPRADVYVCSHVAS*CSGSTL
Trigger: TAGAGTGGACCCACTACAGCATGAAGCCACATGAGA...ACAAACGTACACGTCTGCTCTTGGGACGCCTGGGCAGCTGATCAGAGGTTGTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000023561.8
CDS-3UTR CCA 90 bp CAAGTACTAATCTCTCTCCAAAGGCTCAGTGGGGCTGGAGTGGGGCATGCTGATACACCATGGGTTTTGTaGTCAGCTGGAACGGGAATC +
Preference number: 4 (lower is better)
Translates to: QVLISLQRLSGAGVGHADTPWVL*SAGTGI
Trigger: GATTCCCGTTCCAGCTGACCACAAAACCCATGGTGT...ATCAGCATGCCCCACTCCAGCCCCACTGAGCCTTTGGAGAGAGATTAGTACTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000023561.8
ENSMUST00000231798.2
CDS-3UTR CCA 90 bp TCAGAGCCAAGTACTAATCTCTCTCCAAAGGCTCAGTGGGGCTGGAGTGGGGCAAGATCAGGCTCCATTTaGTGTCCTCTTGTACCTTCC +
Preference number: 4 (lower is better)
Translates to: SEPSTNLSPKAQWGWSGARSGSI*CPLVPS
Trigger: GGAAGGTACAAGAGGACACCAAATGGAGCCTGATCT...TGCCCCACTCCAGCCCCACTGAGCCTTTGGAGAGAGATTAGTACTTGGCTCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000023561.8
CDS-3UTR TCA 90 bp TTCGCCCTCCAGTGTGGGCACTGGGGATCAAACTCTGGTCAGGTAGCTATTTTGGGGTCACTGTCACTCTaGTCTTTGGATAGTCGCTTA +
Preference number: 4 (lower is better)
Translates to: FALQCGHWGSNSGQVAILGSLSL*SLDSRL
Trigger: TAAGCGACTATCCAAAGATCAGAGTGACAGTGACCC...CAAAATAGCTACCTGACCAGAGTTTGATCCCCAGTGCCCACACTGGAGGGCGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000023561.8
CDS-3UTR TCA 90 bp TCCTCCCAGGAAGGATCTACCGACCCTGCCTCTCCCCACTGGGAACTGGGATTAGATAGAAGAATGTACTaGATGCATGAAGTGCTGGAT +
Preference number: 4 (lower is better)
Translates to: SSQEGSTDPASPHWELGLDRRMY*MHEVLD
Trigger: ATCCAGCACTTCATGCATTCAGTACATTCTTCTATC...TAATCCCAGTTCCCAGTGGGGAGAGGCAGGGTCGGTAGATCCTTCCTGGGAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000023561.8
CDS-3UTR GCA 90 bp CTACAACCTCTGATCAGCTGCCCAGGCGTCCCAAGAGCAGACGTGTACGTTTGTCTCATCAGTGTCCACTaGAGTAGAAAACAGAGTGCT +
Preference number: 4 (lower is better)
Translates to: LQPLISCPGVPRADVYVCLISVH*SRKQSA
Trigger: AGCACTCTGTTTTCTACTGCAGTGGACACTGATGAG...ACAAACGTACACGTCTGCTCTTGGGACGCCTGGGCAGCTGATCAGAGGTTGTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000023561.8
CDS-3UTR GCA 90 bp CCAGCATTAGAGAAGCTAGCGAACACCTCCTTCCTCCCCCTGCTGATATCTCTCGTTTCAGCATGCTGCTaGAGGATCCAGAACTCATCA +
Preference number: 4 (lower is better)
Translates to: PALEKLANTSFLPLLISLVSACC*RIQNSS
Trigger: TGATGAGTTCTGGATCCTGCAGCAGCATGCTGAAAC...GAGAGATATCAGCAGGGGGAGGAAGGAGGTGTTCGCTAGCTTCTCTAATGCTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000023561.8
CDS-3UTR CCA 90 bp ATCTCTCTCCAAAGGCTCAGTGGGGCTGGAGTGGGGCATGCTGATGAGCCAAGAGGTTTTGTGGTCAGCTaGAACGGGAATCCAAATAAA +
Preference number: 4 (lower is better)
Translates to: ISLQRLSGAGVGHADEPRGFVVS*NGNPNK
Trigger: TTTATTTGGATTCCCGTTCCAGCTGACCACAAAACC...TCTTGGCTCATCAGCATGCCCCACTCCAGCCCCACTGAGCCTTTGGAGAGAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000023561.8
ENSMUST00000231798.2
CDS-3UTR CCA 90 bp CCAGCATTAGAGAAGCTAGCGAACACCTCCTTCCTCCCCCTGCTGATATCTCTCAAGCAGAAGACACCATaGGTTTTGTGGTCAGCTGGA +
Preference number: 4 (lower is better)
Translates to: PALEKLANTSFLPLLISLKQKTP*VLWSAG
Trigger: TCCAGCTGACCACAAAACCCATGGTGTCTTCTGCTT...GAGAGATATCAGCAGGGGGAGGAAGGAGGTGTTCGCTAGCTTCTCTAATGCTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000023561.8
ENSMUST00000231798.2
CDS-3UTR CCA 90 bp AGGGCCATTGTGGAGAGGCCTTCATGCACTCTTGAGAGCTCAGTACCTGTGAGATGCCGCAGAAGATTCTaGTTTGCTGTGTTCTTCCTG +
Preference number: 4 (lower is better)
Translates to: RAIVERPSCTLESSVPVRCRRRF*FAVFFL
Trigger: CAGGAAGAACACAGCAAACCAGAATCTTCTGCGGCA...TCTCACAGGTACTGAGCTCTCAAGAGTGCATGAAGGCCTCTCCACAATGGCCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000232263.2
CDS-3UTR TCA 90 bp ACAGGCCCAGCTTCCATAACGAAGGTCATTTCAAGTCTCAGAGCAAACAGGTTTGTTGTTCTGACGCCATaGTTCTGCTCCTCCACCCAG +
Preference number: 4 (lower is better)
Translates to: TGPASITKVISSLRANRFVVLTP*FCSSTQ
Trigger: CTGGGTGGAGGAGCAGAATCATGGCGTCAGAACAAC...AAACCTGTTTGCTCTGAGACTTGAAATGACCTTCGTTATGGAAGCTGGGCCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000023561.8
CDS-3UTR GCA 90 bp CTTCCACTTCCTAGACGAAGTCGGGCAGACACTTCTTCTGACAGATCAGGCTCCGCACTCTTGCTCTCTTaGTCTCTTACTCCTGAAGAT +
Preference number: 4 (lower is better)
Translates to: LPLPRRSRADTSSDRSGSALLLS*SLTPED
Trigger: ATCTTCAGGAGTAAGAGAGCAAGAGAGCAAGAGTGC...GGAGCCTGATCTGTCAGAAGAAGTGTCTGCCCGACTTCGTCTAGGAAGTGGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000232263.2
CDS-3UTR TCA 90 bp CACTGGGGATCAAACTCTGGTCAGGTAGCTATTTTGTTTGATAGGCCGGGATCAGGCCCAGGGCATTACTaGTTTCCTTTTCCATGTCCT +
Preference number: 4 (lower is better)
Translates to: HWGSNSGQVAILFDRPGSGPGHY*FPFPCP
Trigger: AGGACATGGAAAAGGAAATCAGTAATGCCCTGGGCC...TGATCCCGGCCTATCAAACAAAATAGCTACCTGACCAGAGTTTGATCCCCAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000023561.8
3UTR CAA 72 bp GGGAACTGGGATTACAGATGTGAGCAGGGATCCAGCTaGTTACAGACACACCTGGCTGAGACTAAAAGTCAA +
Preference number: 4 (lower is better)
Translates to: GNWDYRCEQGSS*LQTHLAETKSQ
Trigger: TTGACTTTTAGTCTCAGCCAGGTGTGTCTGTAACAAGCTGGATCCCTGCTCACATCTGTAATCCCAGTTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000023561.8
3UTR CAA 72 bp CTTCTTCTGACAGATCAGGCTCCATTTGGTGTCCTCTaGTACCTTCCTTTTCAAATCGGAGTCCCACCACCT +
Preference number: 4 (lower is better)
Translates to: LLLTDQAPFGVL*YLPFQIGVPPP
Trigger: AGGTGGTGGGACTCCGATTTGAAAAGGAAGGTACAAGAGGACACCAAATGGAGCCTGATCTGTCAGAAGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000231724.2
ENSMUST00000231798.2
ENSMUST00000232679.2
CDS-3UTR CCA 90 bp TGGTACCTTAGCTTGGATTCAGACACTCAGGTAAAGCAGTGCCACCATAGCTTATCTTGGCCTTTTGGCTaGGATCTCATCAGTGTCCAC +
Preference number: 4 (lower is better)
Translates to: WYLSLDSDTQVKQCHHSLSWPFG*DLISVH
Trigger: GTGGACACTGATGAGATCCCAGCCAAAAGGCCAAGA...TAAGCTATGGTGGCACTGCTTTACCTGAGTGTCTGAATCCAAGCTAAGGTACCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000023561.8
CDS-3UTR CCA 90 bp TTCGCCCTCCAGTGTGGGCACTGGGGATCAAACTCTGGTCAGGTAGCTATTTTGGGAATCCAAATAAACTaGCAGCATTGTAGAGACTGT +
Preference number: 4 (lower is better)
Translates to: FALQCGHWGSNSGQVAILGIQIN*QHCRDC
Trigger: ACAGTCTCTACAATGCTGCCAGTTTATTTGGATTCC...CAAAATAGCTACCTGACCAGAGTTTGATCCCCAGTGCCCACACTGGAGGGCGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000023561.8
CDS-3UTR CCA 90 bp CTACAACCTCTGATCAGCTGCCCAGGCGTCCCAAGAGCAGACGTGTACGTTTGTTGTCACTCTGATCTTTaGATAGTCGCTTATTCCATT +
Preference number: 4 (lower is better)
Translates to: LQPLISCPGVPRADVYVCCHSDL*IVAYSI
Trigger: AATGGAATAAGCGACTATCCAAAGATCAGAGTGACA...ACAAACGTACACGTCTGCTCTTGGGACGCCTGGGCAGCTGATCAGAGGTTGTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000023561.8
CDS-3UTR GCA 90 bp ACAGGCCCAGCTTCCATAACGAAGGTCATTTCAAGTCTCAGAGCAAACAGGTTTAGGAACTCTCTGGATTaGTTTTGCTATGGCGACGAC +
Preference number: 4 (lower is better)
Translates to: TGPASITKVISSLRANRFRNSLD*FCYGDD
Trigger: GTCGTCGCCATAGCAAAAGCAATCCAGAGAGTTCCT...AAACCTGTTTGCTCTGAGACTTGAAATGACCTTCGTTATGGAAGCTGGGCCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000023561.8
CDS-3UTR CCA 90 bp TCCTTTTCAAATCGGAGTCCCACCACCTTCTCTGTATCAGCTTTCCCTTTTGAATCTTGGCCTTTTGGCTaGGATCTCATCAGTGTCCAC +
Preference number: 4 (lower is better)
Translates to: SFSNRSPTTFSVSAFPFESWPFG*DLISVH
Trigger: GTGGACACTGATGAGATCCCAGCCAAAAGGCCAAGA...TTCAAAAGGGAAAGCTGATACAGAGAAGGTGGTGGGACTCCGATTTGAAAAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000231724.2
ENSMUST00000232679.2
CDS-3UTR CCA 90 bp GAGGTCTTCCGTTCTTCTGTCCTTCTCTTTGCTCGGGAAGTTCTTTTCCTTTATTCTTGGCCTTTTGGCTaGGATCTCATCAGTGTCCAC +
Preference number: 4 (lower is better)
Translates to: EVFRSSVLLFAREVLFLYSWPFG*DLISVH
Trigger: GTGGACACTGATGAGATCCCAGCCAAAAGGCCAAGA...ATAAAGGAAAAGAACTTCCCGAGCAAAGAGAAGGACAGAAGAACGGAAGACCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000231724.2
ENSMUST00000232679.2
CDS-3UTR CCA 90 bp AAGCCATTGCTTCCACTTCCTAGACGAAGTCGGGCAGACACTTCTTCTGACAGAGGTTTTGTGGTCAGCTaGAACGGGAATCCAAATAAA +
Preference number: 4 (lower is better)
Translates to: KPLLPLPRRSRADTSSDRGFVVS*NGNPNK
Trigger: TTTATTTGGATTCCCGTTCCAGCTGACCACAAAACC...TCTGTCAGAAGAAGTGTCTGCCCGACTTCGTCTAGGAAGTGGAAGCAATGGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000231798.2
ENSMUST00000232679.2
CDS-3UTR CCA 90 bp CTTGTTCGAAGAGATTTACCCCTTTGGTCCATCTTTTCACTGCTTGGTAACCTCACACCATGGGTTTTGTaGTCAGCTGGAACGGGAATC +
Preference number: 4 (lower is better)
Translates to: LVRRDLPLWSIFSLLGNLTPWVL*SAGTGI
Trigger: GATTCCCGTTCCAGCTGACCACAAAACCCATGGTGT...GAGGTTACCAAGCAGTGAAAAGATGGACCAAAGGGGTAAATCTCTTCGAACAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000231798.2
ENSMUST00000232679.2
3UTR CAA 72 bp TCCGTGTTCCATTACAAGCAGAAGACACCATGGGTTTaGTGGTCAGCTGGAACGGGAATCCAAATAAACTGG +
Preference number: 4 (lower is better)
Translates to: SVFHYKQKTPWV*WSAGTGIQINW
Trigger: CCAGTTTATTTGGATTCCCGTTCCAGCTGACCACAAAACCCATGGTGTCTTCTGCTTGTAATGGAACACGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000231724.2
CDS-3UTR GCA 90 bp AGGATCCAGAACTCATCAGCTCACAAGATGAAGAGTTCGAAAAGACCTCTCCAGCTCATCAGTGTCCACTaGAGTAGAAAACAGAGTGCT +
Preference number: 4 (lower is better)
Translates to: RIQNSSAHKMKSSKRPLQLISVH*SRKQSA
Trigger: AGCACTCTGTTTTCTACTGCAGTGGACACTGATGAG...CTGGAGAGGTCTTTTCGAACTCTTCATCTTGTGAGCTGATGAGTTCTGGATCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000231724.2
CDS-3UTR GCA 90 bp AGTCCCCATCACAGGCCCAGCTTCCATAACGAAGGTCATTTCAAGTCTCAGAGCACTGAATGCATGAAGTaGTGGATAACCTTGCTTTTT +
Preference number: 4 (lower is better)
Translates to: SPHHRPSFHNEGHFKSQSTECMK*WITLLF
Trigger: AAAAAGCAAGGTTATCCAGCACTTCATGCATTCAGT...GCTCTGAGACTTGAAATGACCTTCGTTATGGAAGCTGGGCCTGTGATGGGGACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000023561.8
CDS-3UTR CCA 90 bp GAAGAGATTTACCCCTTTGGTCCATCTTTTCACTGCTTGGTAACCTCCAGACTTAAGCAGAAGACACCATaGGTTTTGTGGTCAGCTGGA +
Preference number: 4 (lower is better)
Translates to: EEIYPFGPSFHCLVTSRLKQKTP*VLWSAG
Trigger: TCCAGCTGACCACAAAACCCATGGTGTCTTCTGCTT...AAGTCTGGAGGTTACCAAGCAGTGAAAAGATGGACCAAAGGGGTAAATCTCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000231798.2
ENSMUST00000232679.2
CDS-3UTR CCA 90 bp TTGTTCGAAGAGATTTACCCCTTTGGTCCATCTTTTCACTGCTTGGTAACCTCCAAGCAGAAGACACCATaGGTTTTGTGGTCAGCTGGA +
Preference number: 4 (lower is better)
Translates to: LFEEIYPFGPSFHCLVTSKQKTP*VLWSAG
Trigger: TCCAGCTGACCACAAAACCCATGGTGTCTTCTGCTT...GGAGGTTACCAAGCAGTGAAAAGATGGACCAAAGGGGTAAATCTCTTCGAACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000231798.2
ENSMUST00000232679.2
3UTR CAA 72 bp ATCTCAAGCACTGATATTTTCCTTCTGAGTAAGCCATaGCTTCCACTTCCTAGACGAAGTCGGGCAGACACT +
Preference number: 4 (lower is better)
Translates to: ISSTDIFLLSKP*LPLPRRSRADT
Trigger: AGTGTCTGCCCGACTTCGTCTAGGAAGTGGAAGCAATGGCTTACTCAGAAGGAAAATATCAGTGCTTGAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000231724.2
ENSMUST00000231798.2
ENSMUST00000232263.2
ENSMUST00000232679.2
CDS-3UTR TCA 90 bp AAGGAACTCTCTGGATTGCTTTTGCTATGGCGACGACCACTTGGCCTTCTATTACTGTTCTTCACTTGGTaGATAAAGCAATCTGCTGGA +
Preference number: 4 (lower is better)
Translates to: KELSGLLLLWRRPLGLLLLFFTW*IKQSAG
Trigger: TCCAGCAGATTGCTTTATTCACCAAGTGAAGAACAG...TAATAGAAGGCCAAGTGGTCGTCGCCATAGCAAAAGCAATCCAGAGAGTTCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000231798.2
CDS-3UTR GCA 90 bp CACTGGGGATCAAACTCTGGTCAGGTAGCTATTTTGTTTGATAGGCCGGGATCAGAAGAATGTACTGAATaGATGAAGTGCTGGATAACC +
Preference number: 4 (lower is better)
Translates to: HWGSNSGQVAILFDRPGSEECTE*MKCWIT
Trigger: GGTTATCCAGCACTTCATGCATTCAGTACATTCTTC...TGATCCCGGCCTATCAAACAAAATAGCTACCTGACCAGAGTTTGATCCCCAGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000023561.8
CDS-3UTR GCA 90 bp CCAATGTACCTTCCGATGAATAGGTACCAGAACAAGTTCTTGTTCGAAGAGATTCAGAAGATTCTGGTTTaGTGTGTTCTTCCTGGCCGG +
Preference number: 4 (lower is better)
Translates to: PMYLPMNRYQNKFLFEEIQKILV*CVLPGR
Trigger: CCGGCCAGGAAGAACACAGCAAACCAGAATCTTCTG...AATCTCTTCGAACAAGAACTTGTTCTGGTACCTATTCATCGGAAGGTACATTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000232263.2
CDS-3UTR GCA 90 bp TTCCGTTCTTCTGTCCTTCTCTTTGCTCGGGAAGTTCTTTTCCTTTATCTCAAGTCTCTCTTGCACTCTTaGACTCTTGCTCTCTTGCTC +
Preference number: 4 (lower is better)
Translates to: FRSSVLLFAREVLFLYLKSLLHS*TLALLL
Trigger: GAGCAAGAGAGCAAGAGTGCAAGAGTGCAAGAGAGA...CTTGAGATAAAGGAAAAGAACTTCCCGAGCAAAGAGAAGGACAGAAGAACGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000232263.2
CDS-3UTR GCA 90 bp ACAGGCCCAGCTTCCATAACGAAGGTCATTTCAAGTCTCAGAGCAAACAGGTTTAAAGGGACGGGGTTTTaGCATTCTTTCTCTTGCTTT +
Preference number: 4 (lower is better)
Translates to: TGPASITKVISSLRANRFKGTGF*HSFSCF
Trigger: AAAGCAAGAGAAAGAATGGCAAAACCCCGTCCCTTT...AAACCTGTTTGCTCTGAGACTTGAAATGACCTTCGTTATGGAAGCTGGGCCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000232263.2
CDS-3UTR CCA 90 bp CTTGTTCGAAGAGATTTACCCCTTTGGTCCATCTTTTCACTGCTTGGTAACCTCCTAATCTTGGCCTTTTaGCTGGGATCTCATCAGTGT +
Preference number: 4 (lower is better)
Translates to: LVRRDLPLWSIFSLLGNLLILAF*LGSHQC
Trigger: ACACTGATGAGATCCCAGCCAAAAGGCCAAGATTAG...GAGGTTACCAAGCAGTGAAAAGATGGACCAAAGGGGTAAATCTCTTCGAACAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000231724.2
ENSMUST00000232679.2
3UTR CAA 72 bp CAGACCTACGACTTAACATGGATGCTCACAGTTACTTaGAATCCAGTTTCAAGAGGAAGCCAAGCTACTTCG +
Preference number: 4 (lower is better)
Translates to: QTYDLTWMLTVT*NPVSRGSQATS
Trigger: CGAAGTAGCTTGGCTTCCTCTTGAAACTGGATTCAAAGTAACTGTGAGCATCCATGTTAAGTCGTAGGTCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000023561.8
ENSMUST00000231798.2
ENSMUST00000232263.2
3UTR CAA 72 bp GGAGTCCCACCACCTTCTCTGTATCAGCTTTCCCTTTaGAATACCTCTTTTCACTTCTCATTGAACAGAGAG +
Preference number: 4 (lower is better)
Translates to: GVPPPSLYQLSL*NTSFHFSLNRE
Trigger: CTCTCTGTTCAATGAGAAGTGAAAAGAGGTATTCAAAAGGGAAAGCTGATACAGAGAAGGTGGTGGGACTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000231724.2
ENSMUST00000231798.2
ENSMUST00000232679.2
CDS-3UTR TCA 90 bp AGGCCCAGCTTCCATAACGAAGGTCATTTCAAGTCTCAGAGCAAACAGGTTTCATCCACTCTAAGAGGTTaGGATCTGTATTTCTTTTGG +
Preference number: 4 (lower is better)
Translates to: RPSFHNEGHFKSQSKQVSSTLRG*DLYFFW
Trigger: CCAAAAGAAATACAGATCTCAACCTCTTAGAGTGGA...TGAAACCTGTTTGCTCTGAGACTTGAAATGACCTTCGTTATGGAAGCTGGGCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000023561.8
CDS-3UTR TCA 90 bp CGTCATTTCTTCTGGCATTTTCAAGCCTTAAAAGAGAGAACCTTAACTGTATGTGTCACACCTTGCTCCTaGGGCTTCCATGTTAAGGAA +
Preference number: 4 (lower is better)
Translates to: RHFFWHFQALKERTLTVCVTPCS*GFHVKE
Trigger: TTCCTTAACATGGAAGCCTCAGGAGCAAGGTGTGAC...ACATACAGTTAAGGTTCTCTCTTTTAAGGCTTGAAAATGCCAGAAGAAATGACG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000023561.8
CDS-3UTR GCA 90 bp CGTCATTTCTTCTGGCATTTTCAAGCCTTAAAAGAGAGAACCTTAACTGTATGTTACCCAGTTTCAGCATaGTGCTGCAGGATCCAGAAC +
Preference number: 4 (lower is better)
Translates to: RHFFWHFQALKERTLTVCYPVSA*CCRIQN
Trigger: GTTCTGGATCCTGCAGCAGCATGCTGAAACTGGGTA...ACATACAGTTAAGGTTCTCTCTTTTAAGGCTTGAAAATGCCAGAAGAAATGACG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000023561.8
CDS-3UTR CCA 90 bp TCCTTTTCAAATCGGAGTCCCACCACCTTCTCTGTATCAGCTTTCCCTTTTGAAGGAATCCAAATAAACTaGCAGCATTGTAGAGACTGT +
Preference number: 4 (lower is better)
Translates to: SFSNRSPTTFSVSAFPFEGIQIN*QHCRDC
Trigger: ACAGTCTCTACAATGCTGCCAGTTTATTTGGATTCC...TTCAAAAGGGAAAGCTGATACAGAGAAGGTGGTGGGACTCCGATTTGAAAAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000231798.2
ENSMUST00000232679.2
CDS-3UTR CCA 90 bp GTTCTTGTTCGAAGAGATTTACCCCTTTGGTCCATCTTTTCACTGCTTGGTAACGGAATCCAAATAAACTaGCAGCATTGTAGAGACTGT +
Preference number: 4 (lower is better)
Translates to: VLVRRDLPLWSIFSLLGNGIQIN*QHCRDC
Trigger: ACAGTCTCTACAATGCTGCCAGTTTATTTGGATTCC...GTTACCAAGCAGTGAAAAGATGGACCAAAGGGGTAAATCTCTTCGAACAAGAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000231798.2
ENSMUST00000232679.2
CDS-3UTR CCA 90 bp CGTCATTTCTTCTGGCATTTTCAAGCCTTAAAAGAGAGAACCTTAACTGTATGTCTAATCTTGGCCTTTTaGCTGGGATCTCATCAGTGT +
Preference number: 4 (lower is better)
Translates to: RHFFWHFQALKERTLTVCLILAF*LGSHQC
Trigger: ACACTGATGAGATCCCAGCCAAAAGGCCAAGATTAG...ACATACAGTTAAGGTTCTCTCTTTTAAGGCTTGAAAATGCCAGAAGAAATGACG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000023561.8
3UTR CAA 72 bp ATGTACCTTCCGATGAATAGGTACCAGAACAAGTTCTaGTTCGAAGAGATTTACCCCTTTGGTCCATCTTTT +
Preference number: 4 (lower is better)
Translates to: MYLPMNRYQNKF*FEEIYPFGPSF
Trigger: AAAAGATGGACCAAAGGGGTAAATCTCTTCGAACAAGAACTTGTTCTGGTACCTATTCATCGGAAGGTACAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000231724.2
ENSMUST00000231798.2
ENSMUST00000232263.2
ENSMUST00000232679.2
CDS-3UTR GCA 90 bp GTGCTGAGTGAATGTGATAGGTTTGTCCCTAGAAATATAATCTGCATATTTACACTCATCAGTGTCCACTaGAGTAGAAAACAGAGTGCT +
Preference number: 4 (lower is better)
Translates to: VLSECDRFVPRNIICIFTLISVH*SRKQSA
Trigger: AGCACTCTGTTTTCTACTGCAGTGGACACTGATGAG...TGTAAATATGCAGATTATATTTCTAGGGACAAACCTATCACATTCACTCAGCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000231724.2
ENSMUST00000232679.2
CDS-3UTR CCA 90 bp AAGAGAAATGATCGGGGACTTTTTAACCCACAATGCATGAGGTATATGGAAACAAGAGATTTACCCCTTTaGTCCATCTTTTCACTGCTT +
Preference number: 4 (lower is better)
Translates to: KRNDRGLFNPQCMRYMETRDLPL*SIFSLL
Trigger: AAGCAGTGAAAAGATGGACCAAAGGGGTAAATCTCT...TGTTTCCATATACCTCATGCATTGTGGGTTAAAAAGTCCCCGATCATTTCTCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENSMUST00000023561.8
CDS-3UTR CCA 90 bp GTGCTGAGTGAATGTGATAGGTTTGTCCCTAGAAATATAATCTGCATATTTACAGGTTTTGTGGTCAGCTaGAACGGGAATCCAAATAAA +
Preference number: 4 (lower is better)
Translates to: VLSECDRFVPRNIICIFTGFVVS*NGNPNK
Trigger: TTTATTTGGATTCCCGTTCCAGCTGACCACAAAACC...TGTAAATATGCAGATTATATTTCTAGGGACAAACCTATCACATTCACTCAGCAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000231798.2
ENSMUST00000232679.2
CDS-3UTR TCA 90 bp CGTCATTTCTTCTGGCATTTTCAAGCCTTAAAAGAGAGAACCTTAACTGTATGTTCATCCTGTAAATACTaGAGAAGAATCTCACAGATC +
Preference number: 4 (lower is better)
Translates to: RHFFWHFQALKERTLTVCSSCKY*RRISQI
Trigger: GATCTGTGAGATTCTTCTTCAGTATTTACAGGATGA...ACATACAGTTAAGGTTCTCTCTTTTAAGGCTTGAAAATGCCAGAAGAAATGACG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000023561.8
CDS-3UTR CCA 90 bp CGTCATTTCTTCTGGCATTTTCAAGCCTTAAAAGAGAGAACCTTAACTGTATGTGAATGCATGAAGTGCTaGATAACCTTGCTTTTTACT +
Preference number: 4 (lower is better)
Translates to: RHFFWHFQALKERTLTVCECMKC*ITLLFT
Trigger: AGTAAAAAGCAAGGTTATCCAGCACTTCATGCATTC...ACATACAGTTAAGGTTCTCTCTTTTAAGGCTTGAAAATGCCAGAAGAAATGACG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000023561.8
3UTR CAA 72 bp TATTTTCTAGTTTTAACTCCACTATGGAACTCCACATaGGGTAGTGAATACGTGCATAAAGATATACTGGAT +
Preference number: 4 (lower is better)
Translates to: YFLVLTPLWNST*GSEYVHKDILD
Trigger: ATCCAGTATATCTTTATGCACGTATTCACTACCCAATGTGGAGTTCCATAGTGGAGTTAAAACTAGAAAATA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000232263.2
CDS-3UTR CAA 90 bp CGACCCTGCCTCTCCCCACTGGGAACTGGGATTACAGATGTGAGCAGGGATCCACTGGAGCGCCGCCTCTaGAGTAGGGCGCGGGCCCCG +
Preference number: 5 (lower is better)
Translates to: RPCLSPLGTGITDVSRDPLERRL*SRARAP
Trigger: CGGGGCCCGCGCCCTACTCAAGAGGCGGCGCTCCAG...TGGATCCCTGCTCACATCTGTAATCCCAGTTCCCAGTGGGGAGAGGCAGGGTCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000023561.8
CDS-3UTR CAA 90 bp CTCTGGATTGCTTTTGCTATGGCGACGACCACTTGGCCTTCTATTATAGCCTTCCTGGAGCGCCGCCTCTaGAGTAGGGCGCGGGCCCCG +
Preference number: 5 (lower is better)
Translates to: LWIAFAMATTTWPSIIAFLERRL*SRARAP
Trigger: CGGGGCCCGCGCCCTACTCAAGAGGCGGCGCTCCAG...GAAGGCTATAATAGAAGGCCAAGTGGTCGTCGCCATAGCAAAAGCAATCCAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000231724.2
ENSMUST00000231798.2
ENSMUST00000232679.2
CDS-3UTR CAA 90 bp GAGCAGACAGCTCAGGCCAGCCCTTCCCTGGTGAGGCTCACACACTCACTCACCCATCTCTGTCACACCTaGCTCCTGAGGCTTCCATGT +
Preference number: 5 (lower is better)
Translates to: EQTAQASPSLVRLTHSLTHLCHT*LLRLPC
Trigger: ACATGGAAGCCTCAGGAGCAAGGTGTGACAGAGATG...GGTGAGTGAGTGTGTGAGCCTCACCAGGGAAGGGCTGGCCTGAGCTGTCTGCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000023561.8
CDS-3UTR CAA 90 bp GAGCAGACAGCTCAGGCCAGCCCTTCCCTGGTGAGGCTCACACACTCACTCACCTCCTCCACCCAGCCTTaGGTCTTTAATGTGTCCATC +
Preference number: 5 (lower is better)
Translates to: EQTAQASPSLVRLTHSLTSSTQP*VFNVSI
Trigger: GATGGACACATTAAAGACCAAAGGCTGGGTGGAGGA...GGTGAGTGAGTGTGTGAGCCTCACCAGGGAAGGGCTGGCCTGAGCTGTCTGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000023561.8
CDS-3UTR CAA 90 bp TGCCTCTCCCCACTGGGAACTGGGATTACAGATGTGAGCAGGGATCCAGCTTGTGGACGCCTCACACCCTaGCCACCCTCTTCAGAAATC +
Preference number: 5 (lower is better)
Translates to: CLSPLGTGITDVSRDPACGRLTP*PPSSEI
Trigger: GATTTCTGAAGAGGGTGGCAAGGGTGTGAGGCGTCC...ACAAGCTGGATCCCTGCTCACATCTGTAATCCCAGTTCCCAGTGGGGAGAGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000023561.8
CDS-3UTR CAA 90 bp TTGAATCCAGTTTCAAGAGGAAGCCAAGCTACTTCGGTTCTAGAAAAGAAAGTCCTGGAGCGCCGCCTCTaGAGTAGGGCGCGGGCCCCG +
Preference number: 5 (lower is better)
Translates to: LNPVSRGSQATSVLEKKVLERRL*SRARAP
Trigger: CGGGGCCCGCGCCCTACTCAAGAGGCGGCGCTCCAG...GACTTTCTTTTCTAGAACCGAAGTAGCTTGGCTTCCTCTTGAAACTGGATTCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000023561.8
ENSMUST00000231798.2
CDS-3UTR CAA 90 bp CTTCCATTGAGGAGCATCTTCAGAGCAGACAGCTCAGGCCAGCCCTTCCCTGGTCGGGTGATTCGCAACTaGAAAGCGCTGCTCAAAATC +
Preference number: 5 (lower is better)
Translates to: LPLRSIFRADSSGQPFPGRVIRN*KALLKI
Trigger: GATTTTGAGCAGCGCTTTCAAGTTGCGAATCACCCG...ACCAGGGAAGGGCTGGCCTGAGCTGTCTGCTCTGAAGATGCTCCTCAATGGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000023561.8
CDS-3UTR CAA 90 bp ATGCATGAAGTGCTGGATAACCTTGCTTTTTACTCCTTTCCACTAAAAGATTCACTGGAGCGCCGCCTCTaGAGTAGGGCGCGGGCCCCG +
Preference number: 5 (lower is better)
Translates to: MHEVLDNLAFYSFPLKDSLERRL*SRARAP
Trigger: CGGGGCCCGCGCCCTACTCAAGAGGCGGCGCTCCAG...TGAATCTTTTAGTGGAAAGGAGTAAAAAGCAAGGTTATCCAGCACTTCATGCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000231724.2
ENSMUST00000231798.2
ENSMUST00000232679.2
CDS-3UTR CAA 90 bp ATCTCTCTCCAAAGGCTCAGTGGGGCTGGAGTGGGGCATGCTGATGAGCCAAGACTTCTGTCCTTCTCTTaGCTCGGGAAGTTCTTTTCC +
Preference number: 5 (lower is better)
Translates to: ISLQRLSGAGVGHADEPRLLSFS*LGKFFS
Trigger: GGAAAAGAACTTCCCGAGCAAAGAGAAGGACAGAAG...TCTTGGCTCATCAGCATGCCCCACTCCAGCCCCACTGAGCCTTTGGAGAGAGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000023561.8
CDS-3UTR CAA 90 bp TCAGGCCAGCCCTTCCCTGGTGAGGCTCACACACTCACTCACCAGACCTACGACAAGAGATTTACCCCTTaGGTCCATCTTTTCACTGCT +
Preference number: 5 (lower is better)
Translates to: SGQPFPGEAHTLTHQTYDKRFTP*VHLFTA
Trigger: AGCAGTGAAAAGATGGACCAAAGGGGTAAATCTCTT...GTCGTAGGTCTGGTGAGTGAGTGTGTGAGCCTCACCAGGGAAGGGCTGGCCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000023561.8
CDS-3UTR CAA 90 bp TCAGAGCCAAGTACTAATCTCTCTCCAAAGGCTCAGTGGGGCTGGAGTGGGGCACTTCTGAGTAAGCCATaGCTTCCACTTCCTAGACGA +
Preference number: 5 (lower is better)
Translates to: SEPSTNLSPKAQWGWSGALLSKP*LPLPRR
Trigger: TCGTCTAGGAAGTGGAAGCAATGGCTTACTCAGAAG...TGCCCCACTCCAGCCCCACTGAGCCTTTGGAGAGAGATTAGTACTTGGCTCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000023561.8
CDS-3UTR CAA 90 bp TCCTCCCAGGAAGGATCTACCGACCCTGCCTCTCCCCACTGGGAACTGGGATTATACCAGAACAAGTTCTaGTTCGAAGAGATTTACCCC +
Preference number: 5 (lower is better)
Translates to: SSQEGSTDPASPHWELGLYQNKF*FEEIYP
Trigger: GGGGTAAATCTCTTCGAACAAGAACTTGTTCTGGTA...TAATCCCAGTTCCCAGTGGGGAGAGGCAGGGTCGGTAGATCCTTCCTGGGAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000023561.8
CDS-3UTR CAA 90 bp TTCGCCCTCCAGTGTGGGCACTGGGGATCAAACTCTGGTCAGGTAGCTATTTTGTGCTCTCTCTCTCTCTaGCACTCTTGCACTCTTGCT +
Preference number: 5 (lower is better)
Translates to: FALQCGHWGSNSGQVAILCSLSL*HSCTLA
Trigger: AGCAAGAGTGCAAGAGTGCAAGAGAGAGAGAGAGCA...CAAAATAGCTACCTGACCAGAGTTTGATCCCCAGTGCCCACACTGGAGGGCGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000232263.2
CDS-3UTR CAA 90 bp CCCGTGCGCACACAGGTGACAGAGAGCTGGGGCTTCTGGTACCTTAGCTTGGATCAACTCTATACTGTTTaGGAACAAAATGGGTTGTTC +
Preference number: 5 (lower is better)
Translates to: PVRTQVTESWGFWYLSLDQLYTV*EQNGLF
Trigger: GAACAACCCATTTTGTTCCAAAACAGTATAGAGTTG...ATCCAAGCTAAGGTACCAGAAGCCCCAGCTCTCTGTCACCTGTGTGCGCACGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000023561.8
CDS-3UTR CAA 90 bp CTTCCACTTCCTAGACGAAGTCGGGCAGACACTTCTTCTGACAGATCAGGCTCCAAAAGGGACGGGGTTTaGCCATTCTTTCTCTTGCTT +
Preference number: 5 (lower is better)
Translates to: LPLPRRSRADTSSDRSGSKRDGV*PFFLLL
Trigger: AAGCAAGAGAAAGAATGGCAAAACCCCGTCCCTTTT...GGAGCCTGATCTGTCAGAAGAAGTGTCTGCCCGACTTCGTCTAGGAAGTGGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000232263.2
CDS-3UTR CAA 90 bp CTCTGGATTGCTTTTGCTATGGCGACGACCACTTGGCCTTCTATTATAGCCTTCCCTAATCTTGGCCTTTaGGCTGGGATCTCATCAGTG +
Preference number: 5 (lower is better)
Translates to: LWIAFAMATTTWPSIIAFPNLGL*AGISSV
Trigger: CACTGATGAGATCCCAGCCAAAAGGCCAAGATTAGG...GAAGGCTATAATAGAAGGCCAAGTGGTCGTCGCCATAGCAAAAGCAATCCAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000231724.2
CDS-3UTR CAA 90 bp TGGTACCTTAGCTTGGATTCAGACACTCAGGTAAAGCAGTGCCACCATAGCTTATTCTCTTTCATCCTTTaGGACACCCTCCTCCACGGT +
Preference number: 5 (lower is better)
Translates to: WYLSLDSDTQVKQCHHSLFSFIL*DTLLHG
Trigger: ACCGTGGAGGAGGGTGTCCAAAAGGATGAAAGAGAA...TAAGCTATGGTGGCACTGCTTTACCTGAGTGTCTGAATCCAAGCTAAGGTACCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000023561.8
CDS-3UTR CAA 90 bp AGGCCCAGCTTCCATAACGAAGGTCATTTCAAGTCTCAGAGCAAACAGGTTTCACAGATCAGGCTCCATTaGGTGTCCTCTTGTACCTTC +
Preference number: 5 (lower is better)
Translates to: RPSFHNEGHFKSQSKQVSQIRLH*VSSCTF
Trigger: GAAGGTACAAGAGGACACCAAATGGAGCCTGATCTG...TGAAACCTGTTTGCTCTGAGACTTGAAATGACCTTCGTTATGGAAGCTGGGCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000023561.8
CDS-3UTR CAA 90 bp AGCAGTGGGAAAAGGGCACTGCCCAATGAGAGAGTGAATTCGTGTGAACACACAGATCCTGTGGCCTTTTaGTCCCATAGAATCCAGATA +
Preference number: 5 (lower is better)
Translates to: SSGKRALPNERVNSCEHTDPVAF*SHRIQI
Trigger: TATCTGGATTCTATGGGACAAAAAGGCCACAGGATC...TGTGTGTTCACACGAATTCACTCTCTCATTGGGCAGTGCCCTTTTCCCACTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000023561.8
CDS-3UTR CAA 90 bp TATTCTTCTCATAAGCTCAATGTAACAGTTCTGTTACCCGTGCGCACACAGGTGCTCTCTGGATTGCTTTaGCTATGGCGACGACCACTT +
Preference number: 5 (lower is better)
Translates to: YSSHKLNVTVLLPVRTQVLSGLL*LWRRPL
Trigger: AAGTGGTCGTCGCCATAGCAAAAGCAATCCAGAGAG...CACCTGTGTGCGCACGGGTAACAGAACTGTTACATTGAGCTTATGAGAAGAATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000023561.8
CDS-3UTR CAA 90 bp CACTGGGGATCAAACTCTGGTCAGGTAGCTATTTTGTTTGATAGGCCGGGATCATCTTTTCACTTCTCATaGAACAGAGAGGTCCTCTTG +
Preference number: 5 (lower is better)
Translates to: HWGSNSGQVAILFDRPGSSFHFS*NREVLL
Trigger: CAAGAGGACCTCTCTGTTCAATGAGAAGTGAAAAGA...TGATCCCGGCCTATCAAACAAAATAGCTACCTGACCAGAGTTTGATCCCCAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000023561.8
CDS-3UTR CAA 90 bp CCAATGTACCTTCCGATGAATAGGTACCAGAACAAGTTCTTGTTCGAAGAGATTGCAGAAGATTCTGGTTaGCTGTGTTCTTCCTGGCCG +
Preference number: 5 (lower is better)
Translates to: PMYLPMNRYQNKFLFEEIAEDSG*LCSSWP
Trigger: CGGCCAGGAAGAACACAGCAAACCAGAATCTTCTGC...AATCTCTTCGAACAAGAACTTGTTCTGGTACCTATTCATCGGAAGGTACATTGG
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000232263.2
CDS-3UTR CAA 90 bp AGCAGTGGGAAAAGGGCACTGCCCAATGAGAGAGTGAATTCGTGTGAACACACATATCAGCTTTCCCTTTaGAATACCTCTTTTCACTTC +
Preference number: 5 (lower is better)
Translates to: SSGKRALPNERVNSCEHTYQLSL*NTSFHF
Trigger: GAAGTGAAAAGAGGTATTCAAAAGGGAAAGCTGATA...TGTGTGTTCACACGAATTCACTCTCTCATTGGGCAGTGCCCTTTTCCCACTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000023561.8
ENSMUST00000232263.2
CDS-3UTR CAA 90 bp CACTGGGGATCAAACTCTGGTCAGGTAGCTATTTTGTTTGATAGGCCGGGATCATATCAGCTTTCCCTTTaGAATACCTCTTTTCACTTC +
Preference number: 5 (lower is better)
Translates to: HWGSNSGQVAILFDRPGSYQLSL*NTSFHF
Trigger: GAAGTGAAAAGAGGTATTCAAAAGGGAAAGCTGATA...TGATCCCGGCCTATCAAACAAAATAGCTACCTGACCAGAGTTTGATCCCCAGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000023561.8
ENSMUST00000232263.2
CDS-3UTR CAA 90 bp TATTCTTCTCATAAGCTCAATGTAACAGTTCTGTTACCCGTGCGCACACAGGTGCCATTTGGTGTCCTCTaGTACCTTCCTTTTCAAATC +
Preference number: 5 (lower is better)
Translates to: YSSHKLNVTVLLPVRTQVPFGVL*YLPFQI
Trigger: GATTTGAAAAGGAAGGTACAAGAGGACACCAAATGG...CACCTGTGTGCGCACGGGTAACAGAACTGTTACATTGAGCTTATGAGAAGAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000023561.8
CDS-3UTR CAA 90 bp GATCCAGAACTCATCAGCTCACAAGATGAAGAGTTCGAAAAGACCTCTCCAGAAGAGACTGTTCTTCACTaGGTGAATAAAGCAATCTGC +
Preference number: 5 (lower is better)
Translates to: DPELISSQDEEFEKTSPEETVLH*VNKAIC
Trigger: GCAGATTGCTTTATTCACCAAGTGAAGAACAGTCTC...TTCTGGAGAGGTCTTTTCGAACTCTTCATCTTGTGAGCTGATGAGTTCTGGATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000231798.2
CDS-3UTR CAA 90 bp CTTGTTCGAAGAGATTTACCCCTTTGGTCCATCTTTTCACTGCTTGGTAACCTCGTAAGCAATAAAGTTTaGCCGCAGAAGATTCTGGTT +
Preference number: 5 (lower is better)
Translates to: LVRRDLPLWSIFSLLGNLVSNKV*PQKILV
Trigger: AACCAGAATCTTCTGCGGCAAAACTTTATTGCTTAC...GAGGTTACCAAGCAGTGAAAAGATGGACCAAAGGGGTAAATCTCTTCGAACAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000232263.2
CDS-3UTR CAA 90 bp CGTCATTTCTTCTGGCATTTTCAAGCCTTAAAAGAGAGAACCTTAACTGTATGTTCTAATCTTGGCCTTTaGGCTGGGATCTCATCAGTG +
Preference number: 5 (lower is better)
Translates to: RHFFWHFQALKERTLTVCSNLGL*AGISSV
Trigger: CACTGATGAGATCCCAGCCAAAAGGCCAAGATTAGA...ACATACAGTTAAGGTTCTCTCTTTTAAGGCTTGAAAATGCCAGAAGAAATGACG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000023561.8
CDS GCA 72 bp ACTGCAGTAGAAAACAGAGTGCTAGTGACTCGCTCCTaGGCTGTCCGCCCGCGACGACACCGGGCGACAGGA +
Preference number: 6 (lower is better)
Translates to: TAVENRVLVTRS*AVRPRRHRATG
Trigger: TCCTGTCGCCCGGTGTCGTCGCGGGCGGACAGCGCAGGAGCGAGTCACTAGCACTCTGTTTTCTACTGCAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000232534.2
CDS TCA 72 bp AAGATTCTGGTTTGCTGTGTTCTTCCTGGCCGGTCGTaGATGCGTGTAAGAGTTGGTGCTGAGACCCGGGAC +
Preference number: 6 (lower is better)
Translates to: KILVCCVLPGRS*MRVRVGAETRD
Trigger: GTCCCGGGTCTCAGCACCAACTCTTACACGCATTCACGACCGGCCAGGAAGAACACAGCAAACCAGAATCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000232263.2
CDS GCA 72 bp AGCTGTGTTCTAAGTAGTAAACATAATCTGCACACGTaGAGGGGCAGTTTTCCCGCCACGTGTTCTGCCTTT +
Preference number: 6 (lower is better)
Translates to: SCVLSSKHNLHT*RGSFPATCSAF
Trigger: AAAGGCAGAACACGTGGCGGGAAAACTGCCCCTGCACGTGTGCAGATTATGTTTACTACTTAGAACACAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000232263.2
CDS CAA 90 bp TTGCTCTCTTGCTCTCTTACTCCTGAAGATGTAAGCAATAAAGTTTaGCCGCAGAAGATTCTGGTTTGCTGTGTTCTTCCTGGCCGGTCG +
Preference number: 6 (lower is better)
Translates to: LLSCSLTPEDVSNKV*PQKILVCCVLPGRS
Trigger: CGACCGGCCAGGAAGAACACAGCAAACCAGAATCTTCTGCGGCAAAACTTTATTGCTTACATCTTCAGGAGTAAGAGAGCAAGAGAGCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000232263.2
CDS CCA 72 bp GAACTAGGAAGGGAAACATTTTCAGTTCCTATCCTGTaGGAAGCCGCCCTCACATTTGCCATTATAAGATGG +
Preference number: 6 (lower is better)
Translates to: ELGRETFSVPIL*EAALTFAIIRW
Trigger: CCATCTTATAATGGCAAATGTGAGGGCGGCTTCCCACAGGATAGGAACTGAAAATGTTTCCCTTCCTAGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000232263.2
CDS CAA 72 bp TCTTGTTCTTTTTCTCTCTCTTGCTCTCTCTCTCTCTaGCACTCTTGCACTCTTGCTCTCTTGCTCTCTTAC +
Preference number: 6 (lower is better)
Translates to: SCSFSLSCSLSL*HSCTLALLLSY
Trigger: GTAAGAGAGCAAGAGAGCAAGAGTGCAAGAGTGCAAGAGAGAGAGAGAGCAAGAGAGAGAAAAAGAACAAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000232263.2
CDS CAA 72 bp TGCTCTCTTACTCCTGAAGATGTAAGCAATAAAGTTTaGCCGCAGAAGATTCTGGTTTGCTGTGTTCTTCCT +
Preference number: 6 (lower is better)
Translates to: CSLTPEDVSNKV*PQKILVCCVLP
Trigger: AGGAAGAACACAGCAAACCAGAATCTTCTGCGGCAAAACTTTATTGCTTACATCTTCAGGAGTAAGAGAGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000232263.2