Pregenerated sensors for SEMA7A (Mus musculus)
Ensembl gene IDs: ENSMUSG00000038264Ensembl transcript IDs: ENSMUST00000043059.9, ENSMUST00000214314.2
Found 156 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | ACAGAGGAGCAGCCCGGGTCTGCAGGGACACTGGCCACCCAGCAGTaGAACAGGGAAGGACGCAAAGGACTCAGCCCCAAGGTCCAGAGA | + |
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Preference number: 1 (lower is better) Translates to: TEEQPGSAGTLATQQ*NREGRKGLSPKVQR Trigger: TCTCTGGACCTTGGGGCTGAGTCCTTTGCGTCCTTCCCTGTTCCACTGCTGGGTGGCCAGTGTCCCTGCAGACCCGGGCTGCTCCTCTGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043059.9 |
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| 3UTR TCA 90 bp | CCAGGCCCTGCCCCAGACACAGCTGGAGAAGGGTCAGCTCTCTGCTaGAATCTATGGACTGTGGGCTGGGAGGCCCACTTGGGAAGCTCG | + |
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Preference number: 1 (lower is better) Translates to: PGPAPDTAGEGSALC*NLWTVGWEAHLGSS Trigger: CGAGCTTCCCAAGTGGGCCTCCCAGCCCACAGTCCATAGATTTCAGCAGAGAGCTGACCCTTCTCCAGCTGTGTCTGGGGCAGGGCCTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043059.9 |
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| 3UTR CCA 90 bp | GACGTCTCCAGGCCCTTTGTCCCCCACTGGATTATTCAGTACCCCTaGAAGAATCAGTGGACAGGGAGCTTCCGGGCCGGCCGGCTGAGT | + |
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Preference number: 1 (lower is better) Translates to: DVSRPFVPHWIIQYP*KNQWTGSFRAGRLS Trigger: ACTCAGCCGGCCGGCCCGGAAGCTCCCTGTCCACTGATTCTTCCAGGGGTACTGAATAATCCAGTGGGGGACAAAGGGCCTGGAGACGTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000043059.9 |
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| 3UTR CCA 90 bp | ACACAGCTGGAGAAGGGTCAGCTCTCTGCTGAAATCTATGGACTGTaGGCTGGGAGGCCCACTTGGGAAGCTCGGCCTGGGCCATCTCCA | + |
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Preference number: 1 (lower is better) Translates to: TQLEKGQLSAEIYGL*AGRPTWEARPGPSP Trigger: TGGAGATGGCCCAGGCCGAGCTTCCCAAGTGGGCCTCCCAGCCCACAGTCCATAGATTTCAGCAGAGAGCTGACCCTTCTCCAGCTGTGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043059.9 |
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| 3UTR CCA 90 bp | AGCAGCCGCCTGCGGCTAGACGTCTCCAGGCCCTTTGTCCCCCACTaGATTATTCAGTACCCCTGGAAGAATCAGTGGACAGGGAGCTTC | + |
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Preference number: 1 (lower is better) Translates to: SSRLRLDVSRPFVPH*IIQYPWKNQWTGSF Trigger: GAAGCTCCCTGTCCACTGATTCTTCCAGGGGTACTGAATAATCCAGTGGGGGACAAAGGGCCTGGAGACGTCTAGCCGCAGGCGGCTGCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000043059.9 |
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| 3UTR CCA 90 bp | CCGGAAAGCAAACATCCTTCAATAAACATGCAAGGCGCTGTCCGGTaGGACCCAGGCTGTGAGGGAGGTACAGAGGAGCAGCCCGGGTCT | + |
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Preference number: 1 (lower is better) Translates to: PESKHPSINMQGAVR*DPGCEGGTEEQPGS Trigger: AGACCCGGGCTGCTCCTCTGTACCTCCCTCACAGCCTGGGTCCCACCGGACAGCGCCTTGCATGTTTATTGAAGGATGTTTGCTTTCCGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043059.9 |
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| 3UTR CCA 90 bp | CCCTTTGTCCCCCACTGGATTATTCAGTACCCCTGGAAGAATCAGTaGACAGGGAGCTTCCGGGCCGGCCGGCTGAGTGTGACATTATTC | + |
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Preference number: 1 (lower is better) Translates to: PFVPHWIIQYPWKNQ*TGSFRAGRLSVTLF Trigger: GAATAATGTCACACTCAGCCGGCCGGCCCGGAAGCTCCCTGTCCACTGATTCTTCCAGGGGTACTGAATAATCCAGTGGGGGACAAAGGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000043059.9 |
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| 3UTR CCA 90 bp | CAGCTCTCTGCTGAAATCTATGGACTGTGGGCTGGGAGGCCCACTTaGGAAGCTCGGCCTGGGCCATCTCCACGGGAATTTTCACAGTTT | + |
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Preference number: 1 (lower is better) Translates to: QLSAEIYGLWAGRPT*EARPGPSPREFSQF Trigger: AAACTGTGAAAATTCCCGTGGAGATGGCCCAGGCCGAGCTTCCCAAGTGGGCCTCCCAGCCCACAGTCCATAGATTTCAGCAGAGAGCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043059.9 |
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| 3UTR-3UTR TCA 90 bp | GAGCAGCCCGGGTCTGCAGGGACACTGGCCACCCAGCAGTGGAACAGGGAAGGAAGCCCACTGCCAGGCTaGTGGGCTCTCAGGCCAGGT | + |
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Preference number: 2 (lower is better) Translates to: EQPGSAGTLATQQWNREGSPLPG*WALRPG Trigger: ACCTGGCCTGAGAGCCCATCAGCCTGGCAGTGGGCT...TCCTTCCCTGTTCCACTGCTGGGTGGCCAGTGTCCCTGCAGACCCGGGCTGCTC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043059.9 |
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| 3UTR-3UTR CCA 90 bp | CAGGGACACTGGCCACCCAGCAGTGGAACAGGGAAGGACGCAAAGGACTCAGCCCCCTGGAAGAATCAGTaGACAGGGAGCTTCCGGGCC | + |
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Preference number: 2 (lower is better) Translates to: QGHWPPSSGTGKDAKDSAPWKNQ*TGSFRA Trigger: GGCCCGGAAGCTCCCTGTCCACTGATTCTTCCAGGG...GGCTGAGTCCTTTGCGTCCTTCCCTGTTCCACTGCTGGGTGGCCAGTGTCCCTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043059.9 |
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| 3UTR-3UTR CCA 90 bp | AGCTCTCTGCTGAAATCTATGGACTGTGGGCTGGGAGGCCCACTTGGGAAGCTCCTCATGCCCTCAGACTaGGCTCCCAGGGCAGAGCCA | + |
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Preference number: 2 (lower is better) Translates to: SSLLKSMDCGLGGPLGKLLMPSD*APRAEP Trigger: TGGCTCTGCCCTGGGAGCCCAGTCTGAGGGCATGAG...GAGCTTCCCAAGTGGGCCTCCCAGCCCACAGTCCATAGATTTCAGCAGAGAGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043059.9 |
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| 3UTR-3UTR CCA 90 bp | AGCTCTCTGCTGAAATCTATGGACTGTGGGCTGGGAGGCCCACTTGGGAAGCTCCTGGCCACCCAGCAGTaGAACAGGGAAGGACGCAAA | + |
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Preference number: 2 (lower is better) Translates to: SSLLKSMDCGLGGPLGKLLATQQ*NREGRK Trigger: TTTGCGTCCTTCCCTGTTCCACTGCTGGGTGGCCAG...GAGCTTCCCAAGTGGGCCTCCCAGCCCACAGTCCATAGATTTCAGCAGAGAGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043059.9 |
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| 3UTR-3UTR CCA 90 bp | AGAAGGGTCAGCTCTCTGCTGAAATCTATGGACTGTGGGCTGGGAGGCCCACTTGGTCTGCAGGGACACTaGCCACCCAGCAGTGGAACA | + |
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Preference number: 2 (lower is better) Translates to: RRVSSLLKSMDCGLGGPLGLQGH*PPSSGT Trigger: TGTTCCACTGCTGGGTGGCCAGTGTCCCTGCAGACC...AAGTGGGCCTCCCAGCCCACAGTCCATAGATTTCAGCAGAGAGCTGACCCTTCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043059.9 |
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| 3UTR-3UTR CCA 90 bp | AGAAGGGTCAGCTCTCTGCTGAAATCTATGGACTGTGGGCTGGGAGGCCCACTTTGGAACCTCCCCCTGTaGACCCGGCTCCTCCTTCAA | + |
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Preference number: 2 (lower is better) Translates to: RRVSSLLKSMDCGLGGPLWNLPL*TRLLLQ Trigger: TTGAAGGAGGAGCCGGGTCCACAGGGGGAGGTTCCA...AAGTGGGCCTCCCAGCCCACAGTCCATAGATTTCAGCAGAGAGCTGACCCTTCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043059.9 |
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| 3UTR-3UTR GCA 90 bp | CCACTCTCGTCAAACCCATGCCTGTCCCTGGACTCTGATCCTATCCCAGGGAGCGGCCAGGTGCATCACTaGATGAAGTCAAGTGTGAGA | + |
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Preference number: 2 (lower is better) Translates to: PLSSNPCLSLDSDPIPGSGQVHH*MKSSVR Trigger: TCTCACACTTGACTTCATGCAGTGATGCACCTGGCC...GCTCCCTGGGATAGGATCAGAGTCCAGGGACAGGCATGGGTTTGACGAGAGTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043059.9 |
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| 3UTR-3UTR CCA 90 bp | CAGACTGGGCTCCCAGGGCAGAGCCAGCTCATGCCACTCTCGTCAAACCCATGCATTATTCAGTACCCCTaGAAGAATCAGTGGACAGGG | + |
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Preference number: 2 (lower is better) Translates to: QTGLPGQSQLMPLSSNPCIIQYP*KNQWTG Trigger: CCCTGTCCACTGATTCTTCCAGGGGTACTGAATAAT...GCATGGGTTTGACGAGAGTGGCATGAGCTGGCTCTGCCCTGGGAGCCCAGTCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043059.9 |
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| 3UTR-3UTR CCA 90 bp | AGAAGGGTCAGCTCTCTGCTGAAATCTATGGACTGTGGGCTGGGAGGCCCACTTCCCTTTGTCCCCCACTaGATTATTCAGTACCCCTGG | + |
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Preference number: 2 (lower is better) Translates to: RRVSSLLKSMDCGLGGPLPFVPH*IIQYPW Trigger: CCAGGGGTACTGAATAATCCAGTGGGGGACAAAGGG...AAGTGGGCCTCCCAGCCCACAGTCCATAGATTTCAGCAGAGAGCTGACCCTTCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000043059.9 |
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| 3UTR-3UTR CCA 90 bp | GGCTCCTCCTTCAAAATGACCACGGCAAATCAACCTAGGGCTCAGTTTTCTTCTCCCAAGGTCCAGAGATaGGGGGTCCCAGCTCCCCTT | + |
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Preference number: 2 (lower is better) Translates to: GSSFKMTTANQPRAQFSSPKVQR*GVPAPL Trigger: AAGGGGAGCTGGGACCCCCCATCTCTGGACCTTGGG...AGAAGAAAACTGAGCCCTAGGTTGATTTGCCGTGGTCATTTTGAAGGAGGAGCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000043059.9 |
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| 3UTR-3UTR GCA 90 bp | GGCTCCTCCTTCAAAATGACCACGGCAAATCAACCTAGGGCTCAGTTTTCTTCTCACACTGGAGGCTCATaGCCTCAGACTGGGCTCCCA | + |
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Preference number: 2 (lower is better) Translates to: GSSFKMTTANQPRAQFSSHTGGS*PQTGLP Trigger: TGGGAGCCCAGTCTGAGGGCATGAGCCTCCAGTGTG...AGAAGAAAACTGAGCCCTAGGTTGATTTGCCGTGGTCATTTTGAAGGAGGAGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043059.9 |
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| 3UTR-3UTR TCA 90 bp | AGAAGGGTCAGCTCTCTGCTGAAATCTATGGACTGTGGGCTGGGAGGCCCACTTGAGAAGATAAAGTCTTaGGTTGCTGATGGCCCAGCT | + |
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Preference number: 2 (lower is better) Translates to: RRVSSLLKSMDCGLGGPLEKIKS*VADGPA Trigger: AGCTGGGCCATCAGCAACTCAAGACTTTATCTTCTC...AAGTGGGCCTCCCAGCCCACAGTCCATAGATTTCAGCAGAGAGCTGACCCTTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043059.9 |
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| 3UTR CCA 72 bp | CAGCCCGGGTCTGCAGGGACACTGGCCACCCAGCAGTaGAACAGGGAAGGACGCAAAGGACTCAGCCCCAAG | + |
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Preference number: 3 (lower is better) Translates to: QPGSAGTLATQQ*NREGRKGLSPK Trigger: CTTGGGGCTGAGTCCTTTGCGTCCTTCCCTGTTCCACTGCTGGGTGGCCAGTGTCCCTGCAGACCCGGGCTG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043059.9 |
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| 3UTR GCA 72 bp | GGGCAGAGCCAGCTCATGCCACTCTCGTCAAACCCATaGCTGTCCCTGGACTCTGATCCTATCCCAGGGAGC | + |
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Preference number: 3 (lower is better) Translates to: GQSQLMPLSSNP*LSLDSDPIPGS Trigger: GCTCCCTGGGATAGGATCAGAGTCCAGGGACAGGCATGGGTTTGACGAGAGTGGCATGAGCTGGCTCTGCCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043059.9 |
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| 3UTR CCA 72 bp | AGGCCCTTTGTCCCCCACTGGATTATTCAGTACCCCTaGAAGAATCAGTGGACAGGGAGCTTCCGGGCCGGC | + |
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Preference number: 3 (lower is better) Translates to: RPFVPHWIIQYP*KNQWTGSFRAG Trigger: GCCGGCCCGGAAGCTCCCTGTCCACTGATTCTTCCAGGGGTACTGAATAATCCAGTGGGGGACAAAGGGCCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000043059.9 |
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| 3UTR CCA 72 bp | GCTGAAATCTATGGACTGTGGGCTGGGAGGCCCACTTaGGAAGCTCGGCCTGGGCCATCTCCACGGGAATTT | + |
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Preference number: 3 (lower is better) Translates to: AEIYGLWAGRPT*EARPGPSPREF Trigger: AAATTCCCGTGGAGATGGCCCAGGCCGAGCTTCCCAAGTGGGCCTCCCAGCCCACAGTCCATAGATTTCAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043059.9 |
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| 3UTR CCA 72 bp | ACAATGCCAAGGGCAGAGTCCTGGAACCTCCCCCTGTaGACCCGGCTCCTCCTTCAAAATGACCACGGCAAA | + |
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Preference number: 3 (lower is better) Translates to: TMPRAESWNLPL*TRLLLQNDHGK Trigger: TTTGCCGTGGTCATTTTGAAGGAGGAGCCGGGTCCACAGGGGGAGGTTCCAGGACTCTGCCCTTGGCATTGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000043059.9 |
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| 3UTR CCA 72 bp | CTGCGGCTAGACGTCTCCAGGCCCTTTGTCCCCCACTaGATTATTCAGTACCCCTGGAAGAATCAGTGGACA | + |
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Preference number: 3 (lower is better) Translates to: LRLDVSRPFVPH*IIQYPWKNQWT Trigger: TGTCCACTGATTCTTCCAGGGGTACTGAATAATCCAGTGGGGGACAAAGGGCCTGGAGACGTCTAGCCGCAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000043059.9 |
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| 3UTR TCA 72 bp | CGGGCTGAAGGGGGCATAGCCTTTCATCTCACCAAGTaGCATCACCACACTGTCATTCACCAAGTTCCAGCA | + |
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Preference number: 3 (lower is better) Translates to: RAEGGIAFHLTK*HHHTVIHQVPA Trigger: TGCTGGAACTTGGTGAATGACAGTGTGGTGATGTCACTTGGTGAGATGAAAGGCTATGCCCCCTTCAGCCCG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000214314.2 |
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| CDS-3UTR TCA 90 bp | CAGACTGGGCTCCCAGGGCAGAGCCAGCTCATGCCACTCTCGTCAAACCCATGCAGGGGTCTCGGGACATaGGGCAGCCATGGCAGCCCC | + |
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Preference number: 4 (lower is better) Translates to: QTGLPGQSQLMPLSSNPCRGLGT*GSHGSP Trigger: GGGGCTGCCATGGCTGCCTCATGTCCCGAGACCCCT...GCATGGGTTTGACGAGAGTGGCATGAGCTGGCTCTGCCCTGGGAGCCCAGTCTG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043059.9 |
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| CDS-3UTR CCA 90 bp | CTGATGGCCCAGCTTCACAGTCGGCGCCTTCCTTCTATAGTCCCTCACTGTCCCGGTCCGCTCCTCGAGTaGCCTTGGGCGGAGGCGGCG | + |
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Preference number: 4 (lower is better) Translates to: LMAQLHSRRLPSIVPHCPGPLLE*PWAEAA Trigger: CGCCGCCTCCGCCCAAGGCCACTCGAGGAGCGGACC...GGGACAGTGAGGGACTATAGAAGGAAGGCGCCGACTGTGAAGCTGGGCCATCAG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043059.9 |
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| CDS-3UTR CCA 90 bp | GAGCAGCCCGGGTCTGCAGGGACACTGGCCACCCAGCAGTGGAACAGGGAAGGAGGCGCCATAAGTAAGTaGCGTGGCGGGACTCCATGG | + |
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Preference number: 4 (lower is better) Translates to: EQPGSAGTLATQQWNREGGAISK*RGGTPW Trigger: CCATGGAGTCCCGCCACGCCACTTACTTATGGCGCC...TCCTTCCCTGTTCCACTGCTGGGTGGCCAGTGTCCCTGCAGACCCGGGCTGCTC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043059.9 |
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| CDS-3UTR CCA 90 bp | ACATCACCACACTGTCATTCACCAAGTTCCAGCAGCTGGGCTTCCGGGCATTGGCTCCTCGAGTGGCCTTaGGCGGAGGCGGCGGCCACC | + |
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Preference number: 4 (lower is better) Translates to: TSPHCHSPSSSSWASGHWLLEWP*AEAAAT Trigger: GGTGGCCGCCGCCTCCGCCCAAGGCCACTCGAGGAG...CCAATGCCCGGAAGCCCAGCTGCTGGAACTTGGTGAATGACAGTGTGGTGATGT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214314.2 |
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| CDS-3UTR CCA 90 bp | CGGCGCCTTCCTTCTATAGTCCCTCACTGTCCCTACCCCACCTGGGCCCCAGCATGCCAGGTCGAGGGTTaGGAAGGCCCATGTGGTAGC | + |
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Preference number: 4 (lower is better) Translates to: RRLPSIVPHCPYPTWAPACQVEG*EGPCGS Trigger: GCTACCACATGGGCCTTCCCAACCCTCGACCTGGCA...TGCTGGGGCCCAGGTGGGGTAGGGACAGTGAGGGACTATAGAAGGAAGGCGCCG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043059.9 |
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| CDS-3UTR TCA 90 bp | CGGCGCCTTCCTTCTATAGTCCCTCACTGTCCCTACCCCACCTGGGCCCCAGCATGCCCTCGGGGAAGTTaGAGTGGTAGACCTTGCCAC | + |
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Preference number: 4 (lower is better) Translates to: RRLPSIVPHCPYPTWAPACPRGS*SGRPCH Trigger: GTGGCAAGGTCTACCACTTCAACTTCCCCGAGGGCA...TGCTGGGGCCCAGGTGGGGTAGGGACAGTGAGGGACTATAGAAGGAAGGCGCCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000043059.9 |
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| CDS-3UTR CCA 90 bp | TTTCCCGCCCTTCCGTCCGGAAAGCAAACATCCTTCAATAAACATGCAAGGCGCCTCCTCGAGTGGCCTTaGGCGGAGGCGGCGGCCACC | + |
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Preference number: 4 (lower is better) Translates to: FPALPSGKQTSFNKHARRLLEWP*AEAAAT Trigger: GGTGGCCGCCGCCTCCGCCCAAGGCCACTCGAGGAG...GCGCCTTGCATGTTTATTGAAGGATGTTTGCTTTCCGGACGGAAGGGCGGGAAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043059.9 |
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| CDS-3UTR GCA 90 bp | GACATCACCACACTGTCATTCACCAAGTTCCAGCAGCTGGGCTTCCGGGCATTGTCCAGACGGCGGAGATaGGGGGTCCGCTCCTCGAGT | + |
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Preference number: 4 (lower is better) Translates to: DITTLSFTKFQQLGFRALSRRRR*GVRSSS Trigger: ACTCGAGGAGCGGACCCCGCATCTCCGCCGTCTGGA...CAATGCCCGGAAGCCCAGCTGCTGGAACTTGGTGAATGACAGTGTGGTGATGTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000214314.2 |
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| CDS-3UTR GCA 90 bp | CAGGGACACTGGCCACCCAGCAGTGGAACAGGGAAGGACGCAAAGGACTCAGCCGCCAGGGAAACCTTCTaGAATGGAGCCTCGTCTGGT | + |
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Preference number: 4 (lower is better) Translates to: QGHWPPSSGTGKDAKDSAARETF*NGASSG Trigger: ACCAGACGAGGCTCCATTGCAGAAGGTTTCCCTGGC...GGCTGAGTCCTTTGCGTCCTTCCCTGTTCCACTGCTGGGTGGCCAGTGTCCCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043059.9 |
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| CDS-3UTR CCA 90 bp | CTGATGGCCCAGCTTCACAGTCGGCGCCTTCCTTCTATAGTCCCTCACTGTCCCCCAAGTTCCAGCAGCTaGGCTTCCGGGCATTGGTGC | + |
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Preference number: 4 (lower is better) Translates to: LMAQLHSRRLPSIVPHCPPSSSS*ASGHWC Trigger: GCACCAATGCCCGGAAGCCCAGCTGCTGGAACTTGG...GGGACAGTGAGGGACTATAGAAGGAAGGCGCCGACTGTGAAGCTGGGCCATCAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043059.9 |
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| CDS-3UTR CCA 90 bp | ACTGGCCACCCAGCAGTGGAACAGGGAAGGACGCAAAGGACTCAGCCCCAAGGTATGTCCAGGGGTACCTaGCTCACTTCCCACTGGGAG | + |
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Preference number: 4 (lower is better) Translates to: TGHPAVEQGRTQRTQPQGMSRGT*LTSHWE Trigger: CTCCCAGTGGGAAGTGAGCCAGGTACCCCTGGACAT...ACCTTGGGGCTGAGTCCTTTGCGTCCTTCCCTGTTCCACTGCTGGGTGGCCAGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043059.9 |
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| CDS-3UTR CCA 90 bp | GCAGAGTCCTGGAACCTCCCCCTGTGGACCCGGCTCCTCCTTCAAAATGACCACCAGCTAGGGCTTTGGTaGCCTGGCTCACAGCTCTGT | + |
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Preference number: 4 (lower is better) Translates to: AESWNLPLWTRLLLQNDHQLGLW*PGSQLC Trigger: ACAGAGCTGTGAGCCAGGCCACCAAAGCCCTAGCTG...GTGGTCATTTTGAAGGAGGAGCCGGGTCCACAGGGGGAGGTTCCAGGACTCTGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000043059.9 |
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| CDS-3UTR CCA 90 bp | GCAGAGTCCTGGAACCTCCCCCTGTGGACCCGGCTCCTCCTTCAAAATGACCACCAGTGCTCTGTCCTCTaGCAGCAGCTCCCAGTGTTG | + |
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Preference number: 4 (lower is better) Translates to: AESWNLPLWTRLLLQNDHQCSVL*QQLPVL Trigger: CAACACTGGGAGCTGCTGCCAGAGGACAGAGCACTG...GTGGTCATTTTGAAGGAGGAGCCGGGTCCACAGGGGGAGGTTCCAGGACTCTGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000043059.9 |
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| CDS-3UTR GCA 90 bp | CAAATCAACCTAGGGCTCAGTTTTCTTCTTCGCTCTCCCCTGTCTCCCTCACCCTCCAGACGGCGGAGATaGGGGGTCCGCTCCTCGAGT | + |
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Preference number: 4 (lower is better) Translates to: QINLGLSFLLRSPLSPSPSRRRR*GVRSSS Trigger: ACTCGAGGAGCGGACCCCGCATCTCCGCCGTCTGGA...GGGTGAGGGAGACAGGGGAGAGCGAAGAAGAAAACTGAGCCCTAGGTTGATTTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000043059.9 |
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| CDS-3UTR CCA 90 bp | AGCCTTTCATCTCACCAAGTGACATCACCACACTGTCATTCACCAAGTTCCAGCGGTCCGCTCCTCGAGTaGCCTTGGGCGGAGGCGGCG | + |
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Preference number: 4 (lower is better) Translates to: SLSSHQVTSPHCHSPSSSGPLLE*PWAEAA Trigger: CGCCGCCTCCGCCCAAGGCCACTCGAGGAGCGGACC...GCTGGAACTTGGTGAATGACAGTGTGGTGATGTCACTTGGTGAGATGAAAGGCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214314.2 |
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| CDS-3UTR CCA 90 bp | GGTCTGCAGGGACACTGGCCACCCAGCAGTGGAACAGGGAAGGACGCAAAGGACCGCTGCAGACCAACATaGCTTTCAGGAAGGTGTTCC | + |
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Preference number: 4 (lower is better) Translates to: GLQGHWPPSSGTGKDAKDRCRPT*LSGRCS Trigger: GGAACACCTTCCTGAAAGCCATGTTGGTCTGCAGCG...GTCCTTTGCGTCCTTCCCTGTTCCACTGCTGGGTGGCCAGTGTCCCTGCAGACC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043059.9 |
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| CDS-3UTR CCA 90 bp | AGCTCTCTGCTGAAATCTATGGACTGTGGGCTGGGAGGCCCACTTGGGAAGCTCCTCTCCACTGGCCACTaGGGTCAGGGAGCAGGAAGA | + |
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Preference number: 4 (lower is better) Translates to: SSLLKSMDCGLGGPLGKLLSTGH*GQGAGR Trigger: TCTTCCTGCTCCCTGACCCCAGTGGCCAGTGGAGAG...GAGCTTCCCAAGTGGGCCTCCCAGCCCACAGTCCATAGATTTCAGCAGAGAGCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043059.9 |
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| CDS-3UTR CCA 90 bp | CCACTCTCGTCAAACCCATGCCTGTCCCTGGACTCTGATCCTATCCCAGGGAGCATGCAGCTAGGGCTTTaGTGGCCTGGCTCACAGCTC | + |
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Preference number: 4 (lower is better) Translates to: PLSSNPCLSLDSDPIPGSMQLGL*WPGSQL Trigger: GAGCTGTGAGCCAGGCCACCAAAGCCCTAGCTGCAT...GCTCCCTGGGATAGGATCAGAGTCCAGGGACAGGCATGGGTTTGACGAGAGTGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043059.9 |
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| CDS-3UTR TCA 90 bp | CCACTCTCGTCAAACCCATGCCTGTCCCTGGACTCTGATCCTATCCCAGGGAGCGATTCCACCACCTTGTaGATGGTGCCCCTGTCTGTG | + |
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Preference number: 4 (lower is better) Translates to: PLSSNPCLSLDSDPIPGSDSTTL*MVPLSV Trigger: CACAGACAGGGGCACCATTCACAAGGTGGTGGAATC...GCTCCCTGGGATAGGATCAGAGTCCAGGGACAGGCATGGGTTTGACGAGAGTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043059.9 |
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| CDS-3UTR TCA 90 bp | CACAGCTGGAGAAGGGTCAGCTCTCTGCTGAAATCTATGGACTGTGGGCTGGGACCAGCAGACCAAGTATaGGTGTGGGCAGGACCCCCA | + |
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Preference number: 4 (lower is better) Translates to: HSWRRVSSLLKSMDCGLGPADQV*VWAGPP Trigger: TGGGGGTCCTGCCCACACTCATACTTGGTCTGCTGG...TCCCAGCCCACAGTCCATAGATTTCAGCAGAGAGCTGACCCTTCTCCAGCTGTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043059.9 |
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| CDS-3UTR CCA 90 bp | GCAGAGTCCTGGAACCTCCCCCTGTGGACCCGGCTCCTCCTTCAAAATGACCACGAAAAGCACGGTGTGTaGCTCAGGCTGGCTAAAGTC | + |
|
Preference number: 4 (lower is better) Translates to: AESWNLPLWTRLLLQNDHEKHGV*LRLAKV Trigger: GACTTTAGCCAGCCTGAGCCACACACCGTGCTTTTC...GTGGTCATTTTGAAGGAGGAGCCGGGTCCACAGGGGGAGGTTCCAGGACTCTGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000043059.9 |
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| CDS-3UTR CCA 90 bp | TGCAGGGACACTGGCCACCCAGCAGTGGAACAGGGAAGGACGCAAAGGACTCAGAGGTCTCTCCATTGCTaGCTTGCATGCGGTGAACGA | + |
|
Preference number: 4 (lower is better) Translates to: CRDTGHPAVEQGRTQRTQRSLHC*LACGER Trigger: TCGTTCACCGCATGCAAGCCAGCAATGGAGAGACCT...CTGAGTCCTTTGCGTCCTTCCCTGTTCCACTGCTGGGTGGCCAGTGTCCCTGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043059.9 |
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| CDS-3UTR CCA 90 bp | AGCTCTCTGCTGAAATCTATGGACTGTGGGCTGGGAGGCCCACTTGGGAAGCTCAGGGCTTTGGTGGCCTaGCTCACAGCTCTGTTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: SSLLKSMDCGLGGPLGKLRALVA*LTALFH Trigger: GTGGAACAGAGCTGTGAGCCAGGCCACCAAAGCCCT...GAGCTTCCCAAGTGGGCCTCCCAGCCCACAGTCCATAGATTTCAGCAGAGAGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043059.9 |
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| CDS-3UTR GCA 90 bp | CTGATGGCCCAGCTTCACAGTCGGCGCCTTCCTTCTATAGTCCCTCACTGTCCCTGGTGGCTGCATCGCTaGAGACCAACATGGCTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: LMAQLHSRRLPSIVPHCPWWLHR*RPTWLS Trigger: TGAAAGCCATGTTGGTCTGCAGCGATGCAGCCACCA...GGGACAGTGAGGGACTATAGAAGGAAGGCGCCGACTGTGAAGCTGGGCCATCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043059.9 |
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| CDS-3UTR GCA 90 bp | CACTGGCCACCCAGCAGTGGAACAGGGAAGGACGCAAAGGACTCAGCCCCAAGGAGCAGGAAGACATCTTaGAGCCGATTGAAGTTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: HWPPSSGTGKDAKDSAPRSRKTS*SRLKFL Trigger: CAGGAACTTCAATCGGCTGCAAGATGTCTTCCTGCT...CCTTGGGGCTGAGTCCTTTGCGTCCTTCCCTGTTCCACTGCTGGGTGGCCAGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043059.9 |
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| CDS-3UTR CCA 90 bp | CACAGCTGGAGAAGGGTCAGCTCTCTGCTGAAATCTATGGACTGTGGGCTGGGAGACAGGACCCCTTTGTaGAGCCGATGTTCACCGTGC | + |
|
Preference number: 4 (lower is better) Translates to: HSWRRVSSLLKSMDCGLGDRTPL*SRCSPC Trigger: GCACGGTGAACATCGGCTCCACAAAGGGGTCCTGTC...TCCCAGCCCACAGTCCATAGATTTCAGCAGAGAGCTGACCCTTCTCCAGCTGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043059.9 |
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| CDS-3UTR CCA 90 bp | CAGGGACACTGGCCACCCAGCAGTGGAACAGGGAAGGACGCAAAGGACTCAGCCGGAAGGTGTTCCACTTaGAGACAGACAACGAACTCT | + |
|
Preference number: 4 (lower is better) Translates to: QGHWPPSSGTGKDAKDSAGRCST*RQTTNS Trigger: AGAGTTCGTTGTCTGTCTCCAAGTGGAACACCTTCC...GGCTGAGTCCTTTGCGTCCTTCCCTGTTCCACTGCTGGGTGGCCAGTGTCCCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043059.9 |
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| CDS-3UTR CCA 90 bp | CCACTCTCGTCAAACCCATGCCTGTCCCTGGACTCTGATCCTATCCCAGGGAGCCAATGGAGCCTCGTCTaGTTTAGGGTTGGGACACTC | + |
|
Preference number: 4 (lower is better) Translates to: PLSSNPCLSLDSDPIPGSQWSLV*FRVGTL Trigger: GAGTGTCCCAACCCTAAACCAGACGAGGCTCCATTG...GCTCCCTGGGATAGGATCAGAGTCCAGGGACAGGCATGGGTTTGACGAGAGTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043059.9 |
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| CDS-3UTR GCA 90 bp | CCACTCTCGTCAAACCCATGCCTGTCCCTGGACTCTGATCCTATCCCAGGGAGCCATTGCTGGCTTGCATaGGGTGAACGACCACTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: PLSSNPCLSLDSDPIPGSHCWLA*GERPLS Trigger: AGAAAGTGGTCGTTCACCGCATGCAAGCCAGCAATG...GCTCCCTGGGATAGGATCAGAGTCCAGGGACAGGCATGGGTTTGACGAGAGTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043059.9 |
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| CDS-3UTR CCA 90 bp | CTGATGGCCCAGCTTCACAGTCGGCGCCTTCCTTCTATAGTCCCTCACTGTCCCAGTAGTTCCAGGGGTTaGAGAAAACGCCATAGACCC | + |
|
Preference number: 4 (lower is better) Translates to: LMAQLHSRRLPSIVPHCPSSSRG*RKRHRP Trigger: GGGTCTATGGCGTTTTCTCCAACCCCTGGAACTACT...GGGACAGTGAGGGACTATAGAAGGAAGGCGCCGACTGTGAAGCTGGGCCATCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043059.9 |
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| CDS-3UTR CCA 90 bp | GCAGAGTCCTGGAACCTCCCCCTGTGGACCCGGCTCCTCCTTCAAAATGACCACTTGAAGACAAAGCTATaGTCCTGGTCCCCTGATTCC | + |
|
Preference number: 4 (lower is better) Translates to: AESWNLPLWTRLLLQNDHLKTKL*SWSPDS Trigger: GGAATCAGGGGACCAGGACCATAGCTTTGTCTTCAA...GTGGTCATTTTGAAGGAGGAGCCGGGTCCACAGGGGGAGGTTCCAGGACTCTGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000043059.9 |
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| CDS-3UTR CCA 90 bp | TTTCCCGCCCTTCCGTCCGGAAAGCAAACATCCTTCAATAAACATGCAAGGCGCCGTGGCGGGACTCCATaGGGCAGGTCAGGTAGTATC | + |
|
Preference number: 4 (lower is better) Translates to: FPALPSGKQTSFNKHARRRGGTP*GRSGSI Trigger: GATACTACCTGACCTGCCCCATGGAGTCCCGCCACG...GCGCCTTGCATGTTTATTGAAGGATGTTTGCTTTCCGGACGGAAGGGCGGGAAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043059.9 |
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| CDS-3UTR TCA 90 bp | CACAGCTGGAGAAGGGTCAGCTCTCTGCTGAAATCTATGGACTGTGGGCTGGGACCATGTGGTAGCCTTTaGGCGATGAGGTACGGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: HSWRRVSSLLKSMDCGLGPCGSL*AMRYGR Trigger: TCTTCCGTACCTCATCGCTCAAAGGCTACCACATGG...TCCCAGCCCACAGTCCATAGATTTCAGCAGAGAGCTGACCCTTCTCCAGCTGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043059.9 |
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| CDS-3UTR GCA 90 bp | TTTCCCGCCCTTCCGTCCGGAAAGCAAACATCCTTCAATAAACATGCAAGGCGCCACTCTCGCCCCGAATaGGTCGAAACCGAGGGATCT | + |
|
Preference number: 4 (lower is better) Translates to: FPALPSGKQTSFNKHARRHSRPE*VETEGS Trigger: AGATCCCTCGGTTTCGACGCATTCGGGGCGAGAGTG...GCGCCTTGCATGTTTATTGAAGGATGTTTGCTTTCCGGACGGAAGGGCGGGAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043059.9 |
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| CDS-3UTR GCA 90 bp | AGAAGGGTCAGCTCTCTGCTGAAATCTATGGACTGTGGGCTGGGAGGCCCACTTGGAAGGTCTCTCCATTaGTGGCTTGCATGCGGTGAA | + |
|
Preference number: 4 (lower is better) Translates to: RRVSSLLKSMDCGLGGPLGRSLH*WLACGE Trigger: TTCACCGCATGCAAGCCAGCAATGGAGAGACCTTCC...AAGTGGGCCTCCCAGCCCACAGTCCATAGATTTCAGCAGAGAGCTGACCCTTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043059.9 |
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| CDS-3UTR CCA 90 bp | CCACTCTCGTCAAACCCATGCCTGTCCCTGGACTCTGATCCTATCCCAGGGAGCGGCCTTGATGAACTGTaGGTTCTGCATGACTGTATC | + |
|
Preference number: 4 (lower is better) Translates to: PLSSNPCLSLDSDPIPGSGLDEL*VLHDCI Trigger: GATACAGTCATGCAGAACCCACAGTTCATCAAGGCC...GCTCCCTGGGATAGGATCAGAGTCCAGGGACAGGCATGGGTTTGACGAGAGTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043059.9 |
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| CDS-3UTR TCA 90 bp | GGCTCCTCCTTCAAAATGACCACGGCAAATCAACCTAGGGCTCAGTTTTCTTCTATGGCCGCTGCACGGTaGAAGGGCTGGATCTCCATG | + |
|
Preference number: 4 (lower is better) Translates to: GSSFKMTTANQPRAQFSSMAAAR*KGWISM Trigger: CATGGAGATCCAGCCCTTTCACCGTGCAGCGGCCAT...AGAAGAAAACTGAGCCCTAGGTTGATTTGCCGTGGTCATTTTGAAGGAGGAGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043059.9 |
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| CDS-3UTR GCA 90 bp | AGAAGGGTCAGCTCTCTGCTGAAATCTATGGACTGTGGGCTGGGAGGCCCACTTCCACCTTGTGAATGGTaGCCCTGTCTGTGGTTAGAT | + |
|
Preference number: 4 (lower is better) Translates to: RRVSSLLKSMDCGLGGPLPPCEW*PCLWLD Trigger: ATCTAACCACAGACAGGGGCACCATTCACAAGGTGG...AAGTGGGCCTCCCAGCCCACAGTCCATAGATTTCAGCAGAGAGCTGACCCTTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043059.9 |
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| CDS-3UTR GCA 90 bp | CACAGCTGGAGAAGGGTCAGCTCTCTGCTGAAATCTATGGACTGTGGGCTGGGAGCTGGATTAATGGACTaGAGCACTGATCGTTGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: HSWRRVSSLLKSMDCGLGAGLMD*STDRWE Trigger: CTCCCAACGATCAGTGCTGCAGTCCATTAATCCAGC...TCCCAGCCCACAGTCCATAGATTTCAGCAGAGAGCTGACCCTTCTCCAGCTGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043059.9 |
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| CDS-3UTR CCA 90 bp | CAAATCAACCTAGGGCTCAGTTTTCTTCTTCGCTCTCCCCTGTCTCCCTCACCCTGGCTAAAGTCCACATaGTCCTGCCCTTTCCAGACG | + |
|
Preference number: 4 (lower is better) Translates to: QINLGLSFLLRSPLSPSPWLKST*SCPFQT Trigger: CGTCTGGAAAGGGCAGGACCATGTGGACTTTAGCCA...GGGTGAGGGAGACAGGGGAGAGCGAAGAAGAAAACTGAGCCCTAGGTTGATTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043059.9 |
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| CDS-3UTR GCA 90 bp | AGAAGGGTCAGCTCTCTGCTGAAATCTATGGACTGTGGGCTGGGAGGCCCACTTTTCCCGTTGTATTCCTaGTTCCGGATGGTAGAGTAC | + |
|
Preference number: 4 (lower is better) Translates to: RRVSSLLKSMDCGLGGPLFPLYS*FRMVEY Trigger: GTACTCTACCATCCGGAAGCAGGAATACAACGGGAA...AAGTGGGCCTCCCAGCCCACAGTCCATAGATTTCAGCAGAGAGCTGACCCTTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043059.9 |
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| CDS-3UTR CCA 90 bp | GGAAAGCAAACATCCTTCAATAAACATGCAAGGCGCTGTCCGGTGGGACCCAGGTGGTGCCCCTGTCTGTaGTTAGATAAAGCACATGGA | + |
|
Preference number: 4 (lower is better) Translates to: GKQTSFNKHARRCPVGPRWCPCL*LDKAHG Trigger: TCCATGTGCTTTATCTAACCACAGACAGGGGCACCA...CCTGGGTCCCACCGGACAGCGCCTTGCATGTTTATTGAAGGATGTTTGCTTTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043059.9 |
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| CDS-3UTR CCA 90 bp | CAAATCAACCTAGGGCTCAGTTTTCTTCTTCGCTCTCCCCTGTCTCCCTCACCCCTTAGAATGGAACAATaGTGTCTTCAGTGGCCCCAT | + |
|
Preference number: 4 (lower is better) Translates to: QINLGLSFLLRSPLSPSPLRMEQ*CLQWPH Trigger: ATGGGGCCACTGAAGACACCATTGTTCCATTCTAAG...GGGTGAGGGAGACAGGGGAGAGCGAAGAAGAAAACTGAGCCCTAGGTTGATTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000043059.9 |
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| CDS-3UTR CCA 90 bp | TTCAAAATGACCACGGCAAATCAACCTAGGGCTCAGTTTTCTTCTTCGCTCTCCGGGACACTCTCTGTGTaGCTCCGCTGGATTAATGGA | + |
|
Preference number: 4 (lower is better) Translates to: FKMTTANQPRAQFSSSLSGTLSV*LRWING Trigger: TCCATTAATCCAGCGGAGCCACACAGAGAGTGTCCC...GGAGAGCGAAGAAGAAAACTGAGCCCTAGGTTGATTTGCCGTGGTCATTTTGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043059.9 |
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| CDS-3UTR CCA 90 bp | TTCAAAATGACCACGGCAAATCAACCTAGGGCTCAGTTTTCTTCTTCGCTCTCCGGAAACCTTCTGCAATaGAGCCTCGTCTGGTTTAGG | + |
|
Preference number: 4 (lower is better) Translates to: FKMTTANQPRAQFSSSLSGNLLQ*SLVWFR Trigger: CCTAAACCAGACGAGGCTCCATTGCAGAAGGTTTCC...GGAGAGCGAAGAAGAAAACTGAGCCCTAGGTTGATTTGCCGTGGTCATTTTGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043059.9 |
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| CDS CCA 90 bp | TCCTGCCCTTTCCAGACGGCGGAGATGCGGGGTCCGCTCCTCGAGTaGCCTTGGGCGGAGGCGGCGGCCACCCAGAACACCAGCAGAAGC | + |
|
Preference number: 5 (lower is better) Translates to: SCPFQTAEMRGPLLE*PWAEAAATQNTSRS Trigger: GCTTCTGCTGGTGTTCTGGGTGGCCGCCGCCTCCGCCCAAGGCCACTCGAGGAGCGGACCCCGCATCTCCGCCGTCTGGAAAGGGCAGGA 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043059.9 |
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| CDS CCA 90 bp | TGTTCACCTTTCCAGACGGCGGAGATGCGGGGTCCGCTCCTCGAGTaGCCTTGGGCGGAGGCGGCGGCCACCCAGAACACCAGCAGAAGC | + |
|
Preference number: 5 (lower is better) Translates to: CSPFQTAEMRGPLLE*PWAEAAATQNTSRS Trigger: GCTTCTGCTGGTGTTCTGGGTGGCCGCCGCCTCCGCCCAAGGCCACTCGAGGAGCGGACCCCGCATCTCCGCCGTCTGGAAAGGTGAACA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214314.2 |
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| CDS-3UTR CAA 90 bp | ACTGGCCACCCAGCAGTGGAACAGGGAAGGACGCAAAGGACTCAGCCCCAAGGTGCTCCTCGAGTGGCCTaGGGCGGAGGCGGCGGCCAC | + |
|
Preference number: 5 (lower is better) Translates to: TGHPAVEQGRTQRTQPQGAPRVA*GGGGGH Trigger: GTGGCCGCCGCCTCCGCCCAAGGCCACTCGAGGAGC...ACCTTGGGGCTGAGTCCTTTGCGTCCTTCCCTGTTCCACTGCTGGGTGGCCAGT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043059.9 |
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| CDS-3UTR CAA 90 bp | CACACTGTCATTCACCAAGTTCCAGCAGCTGGGCTTCCGGGCATTGGTGCCACAGCTCCTCGAGTGGCCTaGGGCGGAGGCGGCGGCCAC | + |
|
Preference number: 5 (lower is better) Translates to: HTVIHQVPAAGLPGIGATAPRVA*GGGGGH Trigger: GTGGCCGCCGCCTCCGCCCAAGGCCACTCGAGGAGC...TGTGGCACCAATGCCCGGAAGCCCAGCTGCTGGAACTTGGTGAATGACAGTGTG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214314.2 |
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| CDS GCA 90 bp | AAAAGCACGGTGTGTGGCTCAGGCTGGCTAAAGTCCACATGGTCCTaGCCTTTCCAGACGGCGGAGATGCGGGGTCCGCTCCTCGAGTGG | + |
|
Preference number: 5 (lower is better) Translates to: KSTVCGSGWLKSTWS*PFQTAEMRGPLLEW Trigger: CCACTCGAGGAGCGGACCCCGCATCTCCGCCGTCTGGAAAGGGCAGGACCATGTGGACTTTAGCCAGCCTGAGCCACACACCGTGCTTTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043059.9 |
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| CDS-3UTR CAA 90 bp | CAGGGACACTGGCCACCCAGCAGTGGAACAGGGAAGGACGCAAAGGACTCAGCCGATGCAGCTAGGGCTTaGGTGGCCTGGCTCACAGCT | + |
|
Preference number: 5 (lower is better) Translates to: QGHWPPSSGTGKDAKDSADAARA*VAWLTA Trigger: AGCTGTGAGCCAGGCCACCAAAGCCCTAGCTGCATC...GGCTGAGTCCTTTGCGTCCTTCCCTGTTCCACTGCTGGGTGGCCAGTGTCCCTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043059.9 |
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| CDS-3UTR CAA 90 bp | GCAGAGTCCTGGAACCTCCCCCTGTGGACCCGGCTCCTCCTTCAAAATGACCACGGAGCCTCGGGGTTCTaGTCAGGGTTGTCTTCTCGG | + |
|
Preference number: 5 (lower is better) Translates to: AESWNLPLWTRLLLQNDHGASGF*SGLSSR Trigger: CCGAGAAGACAACCCTGACAAGAACCCCGAGGCTCC...GTGGTCATTTTGAAGGAGGAGCCGGGTCCACAGGGGGAGGTTCCAGGACTCTGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000043059.9 |
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| CDS CCA 90 bp | GAGAAGCTGCCCGGCTCATGGAAAAGCACGGTGTGTGGCTCAGGCTaGCTAAAGTCCACATGGTCCTGCCCTTTCCAGACGGCGGAGATG | + |
|
Preference number: 5 (lower is better) Translates to: EKLPGSWKSTVCGSG*LKSTWSCPFQTAEM Trigger: CATCTCCGCCGTCTGGAAAGGGCAGGACCATGTGGACTTTAGCCAGCCTGAGCCACACACCGTGCTTTTCCATGAGCCGGGCAGCTTCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043059.9 |
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| CDS CCA 90 bp | ACCTTGCCACGTCCACCCACCCAGACAGAGAAGCTGCCCGGCTCATaGAAAAGCACGGTGTGTGGCTCAGGCTGGCTAAAGTCCACATGG | + |
|
Preference number: 5 (lower is better) Translates to: TLPRPPTQTEKLPGS*KSTVCGSGWLKSTW Trigger: CCATGTGGACTTTAGCCAGCCTGAGCCACACACCGTGCTTTTCCATGAGCCGGGCAGCTTCTCTGTCTGGGTGGGTGGACGTGGCAAGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043059.9 |
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| CDS-3UTR CAA 90 bp | CTGATGGCCCAGCTTCACAGTCGGCGCCTTCCTTCTATAGTCCCTCACTGTCCCCCTGACAGGACCCCTTaGTGGAGCCGATGTTCACCG | + |
|
Preference number: 5 (lower is better) Translates to: LMAQLHSRRLPSIVPHCPPDRTP*WSRCSP Trigger: CGGTGAACATCGGCTCCACAAAGGGGTCCTGTCAGG...GGGACAGTGAGGGACTATAGAAGGAAGGCGCCGACTGTGAAGCTGGGCCATCAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000043059.9 |
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| CDS-3UTR CAA 90 bp | GGTCTGCAGGGACACTGGCCACCCAGCAGTGGAACAGGGAAGGACGCAAAGGACCGAGGGATCTTCCCGTaGTATTCCTGCTTCCGGATG | + |
|
Preference number: 5 (lower is better) Translates to: GLQGHWPPSSGTGKDAKDRGIFP*YSCFRM Trigger: CATCCGGAAGCAGGAATACAACGGGAAGATCCCTCG...GTCCTTTGCGTCCTTCCCTGTTCCACTGCTGGGTGGCCAGTGTCCCTGCAGACC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043059.9 |
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| CDS-3UTR CAA 90 bp | CACAGCTGGAGAAGGGTCAGCTCTCTGCTGAAATCTATGGACTGTGGGCTGGGAGAGGTAGGAGCCCTCTaGGGCCTCGCAGCGGTAGTG | + |
|
Preference number: 5 (lower is better) Translates to: HSWRRVSSLLKSMDCGLGEVGAL*GLAAVV Trigger: CACTACCGCTGCGAGGCCCAAGAGGGCTCCTACCTC...TCCCAGCCCACAGTCCATAGATTTCAGCAGAGAGCTGACCCTTCTCCAGCTGTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043059.9 |
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| CDS TCA 90 bp | CGATGTTCACCGTGCGCACAGAGGCATTCTTGCCCTCGGGGAAGTTaGAGTGGTAGACCTTGCCACGTCCACCCACCCAGACAGAGAAGC | + |
|
Preference number: 5 (lower is better) Translates to: RCSPCAQRHSCPRGS*SGRPCHVHPPRQRS Trigger: GCTTCTCTGTCTGGGTGGGTGGACGTGGCAAGGTCTACCACTTCAACTTCCCCGAGGGCAAGAATGCCTCTGTGCGCACGGTGAACATCG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043059.9 |
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| CDS CCA 90 bp | CACCCAGACAGAGAAGCTGCCCGGCTCATGGAAAAGCACGGTGTGTaGCTCAGGCTGGCTAAAGTCCACATGGTCCTGCCCTTTCCAGAC | + |
|
Preference number: 5 (lower is better) Translates to: HPDREAARLMEKHGV*LRLAKVHMVLPFPD Trigger: GTCTGGAAAGGGCAGGACCATGTGGACTTTAGCCAGCCTGAGCCACACACCGTGCTTTTCCATGAGCCGGGCAGCTTCTCTGTCTGGGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043059.9 |
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| CDS-3UTR CAA 90 bp | GCAGAGTCCTGGAACCTCCCCCTGTGGACCCGGCTCCTCCTTCAAAATGACCACGTATGGGCTGCTTTTTaGGGAGGCACATGCCAGGTC | + |
|
Preference number: 5 (lower is better) Translates to: AESWNLPLWTRLLLQNDHVWAAF*GGTCQV Trigger: GACCTGGCATGTGCCTCCCAAAAAAGCAGCCCATAC...GTGGTCATTTTGAAGGAGGAGCCGGGTCCACAGGGGGAGGTTCCAGGACTCTGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000043059.9 |
||
| CDS CCA 90 bp | CATTCTCCTCATGGCGCCATAAGTAAGTGGCGTGGCGGGACTCCATaGGGCAGGTCAGGTAGTATCGAGAGTTCCGAGCCAGGGAAACCT | + |
|
Preference number: 5 (lower is better) Translates to: HSPHGAISKWRGGTP*GRSGSIESSEPGKP Trigger: AGGTTTCCCTGGCTCGGAACTCTCGATACTACCTGACCTGCCCCATGGAGTCCCGCCACGCCACTTACTTATGGCGCCATGAGGAGAATG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043059.9 |
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| CDS CCA 90 bp | CGGGCCGTGAGGTTCTCAATGAACAGGATGCAGCTAGGGCTTTGGTaGCCTGGCTCACAGCTCTGTTCCACATTCTCCTCATGGCGCCAT | + |
|
Preference number: 5 (lower is better) Translates to: RAVRFSMNRMQLGLW*PGSQLCSTFSSWRH Trigger: ATGGCGCCATGAGGAGAATGTGGAACAGAGCTGTGAGCCAGGCCACCAAAGCCCTAGCTGCATCCTGTTCATTGAGAACCTCACGGCCCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043059.9 |
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| CDS-3UTR CAA 90 bp | AGAAGGGTCAGCTCTCTGCTGAAATCTATGGACTGTGGGCTGGGAGGCCCACTTGCTACTCGGGACACATaGAGAGGAGCCTCGGGGTTC | + |
|
Preference number: 5 (lower is better) Translates to: RRVSSLLKSMDCGLGGPLATRDT*RGASGF Trigger: GAACCCCGAGGCTCCTCTCAATGTGTCCCGAGTAGC...AAGTGGGCCTCCCAGCCCACAGTCCATAGATTTCAGCAGAGAGCTGACCCTTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043059.9 |
||
| CDS TCA 90 bp | ACTGGCCACTGGGGTCAGGGAGCAGGAAGACATCTTGCAGCCGATTaGAGTTCCTGTTGGTGGCTGCATCGCTGCAGACCAACATGGCTT | + |
|
Preference number: 5 (lower is better) Translates to: TGHWGQGAGRHLAAD*SSCWWLHRCRPTWL Trigger: AAGCCATGTTGGTCTGCAGCGATGCAGCCACCAACAGGAACTTCAATCGGCTGCAAGATGTCTTCCTGCTCCCTGACCCCAGTGGCCAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043059.9 |
||
| CDS CCA 90 bp | TGGTGTCTTCAGTGGCCCCATAGGTTCCACCCTCTGAGCCACCTCTaGGTGACTATCAGCTACCTGGAAGGTTTCTGTGGGTATGGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: WCLQWPHRFHPLSHL*VTISYLEGFCGYGL Trigger: CAGCCCATACCCACAGAAACCTTCCAGGTAGCTGATAGTCACCCAGAGGTGGCTCAGAGGGTGGAACCTATGGGGCCACTGAAGACACCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043059.9 |
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| CDS CCA 90 bp | GCTCACAGCTCTGTTCCACATTCTCCTCATGGCGCCATAAGTAAGTaGCGTGGCGGGACTCCATGGGGCAGGTCAGGTAGTATCGAGAGT | + |
|
Preference number: 5 (lower is better) Translates to: AHSSVPHSPHGAISK*RGGTPWGRSGSIES Trigger: ACTCTCGATACTACCTGACCTGCCCCATGGAGTCCCGCCACGCCACTTACTTATGGCGCCATGAGGAGAATGTGGAACAGAGCTGTGAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043059.9 |
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| CDS-3UTR CAA 90 bp | ACTGGCCACCCAGCAGTGGAACAGGGAAGGACGCAAAGGACTCAGCCCCAAGGTAGGAAGGTGTTCCACTaGGAGACAGACAACGAACTC | + |
|
Preference number: 5 (lower is better) Translates to: TGHPAVEQGRTQRTQPQGRKVFH*ETDNEL Trigger: GAGTTCGTTGTCTGTCTCCAAGTGGAACACCTTCCT...ACCTTGGGGCTGAGTCCTTTGCGTCCTTCCCTGTTCCACTGCTGGGTGGCCAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043059.9 |
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| CDS-3UTR CAA 90 bp | AGCTCTCTGCTGAAATCTATGGACTGTGGGCTGGGAGGCCCACTTGGGAAGCTCCGATTGAAGTTCCTGTaGGTGGCTGCATCGCTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: SSLLKSMDCGLGGPLGKLRLKFL*VAASLQ Trigger: CTGCAGCGATGCAGCCACCAACAGGAACTTCAATCG...GAGCTTCCCAAGTGGGCCTCCCAGCCCACAGTCCATAGATTTCAGCAGAGAGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043059.9 |
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| CDS-3UTR CAA 90 bp | AGCTCTCTGCTGAAATCTATGGACTGTGGGCTGGGAGGCCCACTTGGGAAGCTCTCGTCTGGTTTAGGGTaGGGACACTCTCTGTGTGGC | + |
|
Preference number: 5 (lower is better) Translates to: SSLLKSMDCGLGGPLGKLSSGLG*GHSLCG Trigger: GCCACACAGAGAGTGTCCCAACCCTAAACCAGACGA...GAGCTTCCCAAGTGGGCCTCCCAGCCCACAGTCCATAGATTTCAGCAGAGAGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043059.9 |
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| CDS TCA 90 bp | GGCACATGCCAGGTCGAGGGTTGGGAAGGCCCATGTGGTAGCCTTTaGGCGATGAGGTACGGAAGACTCTGTCAATGTCACCAAGCGAAT | + |
|
Preference number: 5 (lower is better) Translates to: GTCQVEGWEGPCGSL*AMRYGRLCQCHQAN Trigger: ATTCGCTTGGTGACATTGACAGAGTCTTCCGTACCTCATCGCTCAAAGGCTACCACATGGGCCTTCCCAACCCTCGACCTGGCATGTGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043059.9 |
||
| CDS-3UTR CAA 90 bp | CTGATGGCCCAGCTTCACAGTCGGCGCCTTCCTTCTATAGTCCCTCACTGTCCCGAGCAGGAAGACATCTaGCAGCCGATTGAAGTTCCT | + |
|
Preference number: 5 (lower is better) Translates to: LMAQLHSRRLPSIVPHCPEQEDI*QPIEVP Trigger: AGGAACTTCAATCGGCTGCAAGATGTCTTCCTGCTC...GGGACAGTGAGGGACTATAGAAGGAAGGCGCCGACTGTGAAGCTGGGCCATCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043059.9 |
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| CDS-3UTR CAA 90 bp | CACCAAGTGACATCACCACACTGTCATTCACCAAGTTCCAGCAGCTGGGCTTCCCCTGACAGGACCCCTTaGTGGAGCCGATGTTCACCT | + |
|
Preference number: 5 (lower is better) Translates to: HQVTSPHCHSPSSSSWASPDRTP*WSRCSP Trigger: AGGTGAACATCGGCTCCACAAAGGGGTCCTGTCAGG...GGAAGCCCAGCTGCTGGAACTTGGTGAATGACAGTGTGGTGATGTCACTTGGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214314.2 |
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| CDS-3UTR CAA 90 bp | ACTGGCCACCCAGCAGTGGAACAGGGAAGGACGCAAAGGACTCAGCCCCAAGGTCTTATCATCATAGGCTaGGTCTTGGTGCACAATGGT | + |
|
Preference number: 5 (lower is better) Translates to: TGHPAVEQGRTQRTQPQGLIIIG*VLVHNG Trigger: ACCATTGTGCACCAAGACCAAGCCTATGATGATAAG...ACCTTGGGGCTGAGTCCTTTGCGTCCTTCCCTGTTCCACTGCTGGGTGGCCAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043059.9 |
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| CDS TCA 90 bp | TGGTGCCACAGACCAGCAGCCCATTACCCCGCCTTTCTAGAAGAGTaGTGTAATTCCCACAGTCCTGTTTGTCCTGACAGGACCCCTTTG | + |
|
Preference number: 5 (lower is better) Translates to: WCHRPAAHYPAFLEE*CNSHSPVCPDRTPL Trigger: CAAAGGGGTCCTGTCAGGACAAACAGGACTGTGGGAATTACATCACTCTTCTAGAAAGGCGGGGTAATGGGCTGCTGGTCTGTGGCACCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043059.9 |
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| CDS TCA 90 bp | GTTCTCATCCGGGCTGAAGGGGGCATAGCCTTTCATCTCACCAAGTaGCATCACCACACTGTCATTCACCAAGTTCCAGCAGCTGGGCTT | + |
|
Preference number: 5 (lower is better) Translates to: VLIRAEGGIAFHLTK*HHHTVIHQVPAAGL Trigger: AAGCCCAGCTGCTGGAACTTGGTGAATGACAGTGTGGTGATGTCACTTGGTGAGATGAAAGGCTATGCCCCCTTCAGCCCGGATGAGAAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043059.9 |
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| CDS TCA 90 bp | CGCCGGTCAGCATCCAATGATATAGCCTGGATGGCCGCTGCACGGTaGAAGGGCTGGATCTCCATGATATTGAAGACAAAGCTATGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: RRSASNDIAWMAAAR*KGWISMILKTKLWS Trigger: GGACCATAGCTTTGTCTTCAATATCATGGAGATCCAGCCCTTTCACCGTGCAGCGGCCATCCAGGCTATATCATTGGATGCTGACCGGCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043059.9 |
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| CDS GCA 90 bp | TCGCCCCGAATGCGTCGAAACCGAGGGATCTTCCCGTTGTATTCCTaGTTCCGGATGGTAGAGTACACTTCATCTCCTTCAAACAGAACC | + |
|
Preference number: 5 (lower is better) Translates to: SPRMRRNRGIFPLYS*FRMVEYTSSPSNRT Trigger: GGTTCTGTTTGAAGGAGATGAAGTGTACTCTACCATCCGGAAGCAGGAATACAACGGGAAGATCCCTCGGTTTCGACGCATTCGGGGCGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043059.9 |
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| CDS CCA 90 bp | GCGGTGAACGACCACTTTCTGGTAATGGTACTTAGAATGGAACAATaGTGTCTTCAGTGGCCCCATAGGTTCCACCCTCTGAGCCACCTC | + |
|
Preference number: 5 (lower is better) Translates to: AVNDHFLVMVLRMEQ*CLQWPHRFHPLSHL Trigger: GAGGTGGCTCAGAGGGTGGAACCTATGGGGCCACTGAAGACACCATTGTTCCATTCTAAGTACCATTACCAGAAAGTGGTCGTTCACCGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043059.9 |
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| CDS-3UTR CAA 90 bp | CTGATGGCCCAGCTTCACAGTCGGCGCCTTCCTTCTATAGTCCCTCACTGTCCCTGGATCTCCATGATATaGAAGACAAAGCTATGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: LMAQLHSRRLPSIVPHCPWISMI*KTKLWS Trigger: GGACCATAGCTTTGTCTTCAATATCATGGAGATCCA...GGGACAGTGAGGGACTATAGAAGGAAGGCGCCGACTGTGAAGCTGGGCCATCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043059.9 |
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| CDS TCA 90 bp | ACACTTCATCTCCTTCAAACAGAACCAGGGAGTTCTCATCCGGGCTaGAGGGGGCATAGCCTTTCATCTCACCAAGTGACATCACCACAC | + |
|
Preference number: 5 (lower is better) Translates to: TLHLLQTEPGSSHPG*RGHSLSSHQVTSPH Trigger: GTGTGGTGATGTCACTTGGTGAGATGAAAGGCTATGCCCCCTTCAGCCCGGATGAGAACTCCCTGGTTCTGTTTGAAGGAGATGAAGTGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043059.9 |
||
| CDS-3UTR CAA 90 bp | TTCAAAATGACCACGGCAAATCAACCTAGGGCTCAGTTTTCTTCTTCGCTCTCCCGCACAGAGGCATTCTaGCCCTCGGGGAAGTTGAAG | + |
|
Preference number: 5 (lower is better) Translates to: FKMTTANQPRAQFSSSLSRTEAF*PSGKLK Trigger: CTTCAACTTCCCCGAGGGCAAGAATGCCTCTGTGCG...GGAGAGCGAAGAAGAAAACTGAGCCCTAGGTTGATTTGCCGTGGTCATTTTGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000043059.9 |
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| CDS GCA 90 bp | TGCCCCTGTCTGTGGTTAGATAAAGCACATGGAAGGTCTCTCCATTaGTGGCTTGCATGCGGTGAACGACCACTTTCTGGTAATGGTACT | + |
|
Preference number: 5 (lower is better) Translates to: CPCLWLDKAHGRSLH*WLACGERPLSGNGT Trigger: AGTACCATTACCAGAAAGTGGTCGTTCACCGCATGCAAGCCAGCAATGGAGAGACCTTCCATGTGCTTTATCTAACCACAGACAGGGGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043059.9 |
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| CDS CCA 90 bp | CACTTTCTGGTAATGGTACTTAGAATGGAACAATGGTGTCTTCAGTaGCCCCATAGGTTCCACCCTCTGAGCCACCTCTGGGTGACTATC | + |
|
Preference number: 5 (lower is better) Translates to: HFLVMVLRMEQWCLQ*PHRFHPLSHLWVTI Trigger: GATAGTCACCCAGAGGTGGCTCAGAGGGTGGAACCTATGGGGCCACTGAAGACACCATTGTTCCATTCTAAGTACCATTACCAGAAAGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043059.9 |
||
| CDS CCA 72 bp | TTCCAGACGGCGGAGATGCGGGGTCCGCTCCTCGAGTaGCCTTGGGCGGAGGCGGCGGCCACCCAGAACACC | + |
|
Preference number: 6 (lower is better) Translates to: FQTAEMRGPLLE*PWAEAAATQNT Trigger: GGTGTTCTGGGTGGCCGCCGCCTCCGCCCAAGGCCACTCGAGGAGCGGACCCCGCATCTCCGCCGTCTGGAA 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043059.9 ENSMUST00000214314.2 |
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| CDS GCA 72 bp | AGTCCACATGGTCCTGCCCTTTCCAGACGGCGGAGATaGGGGGTCCGCTCCTCGAGTGGCCTTGGGCGGAGG | + |
|
Preference number: 6 (lower is better) Translates to: SPHGPALSRRRR*GVRSSSGLGRR Trigger: CCTCCGCCCAAGGCCACTCGAGGAGCGGACCCCGCATCTCCGCCGTCTGGAAAGGGCAGGACCATGTGGACT 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043059.9 |
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| CDS GCA 72 bp | TGTGGAGCCGATGTTCACCTTTCCAGACGGCGGAGATaGGGGGTCCGCTCCTCGAGTGGCCTTGGGCGGAGG | + |
|
Preference number: 6 (lower is better) Translates to: CGADVHLSRRRR*GVRSSSGLGRR Trigger: CCTCCGCCCAAGGCCACTCGAGGAGCGGACCCCGCATCTCCGCCGTCTGGAAAGGTGAACATCGGCTCCACA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000214314.2 |
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| CDS CAA 72 bp | CTCCCAGTGTTGAGCCTCACGGAGGTAGGAGCCCTCTaGGGCCTCGCAGCGGTAGTGGCCATACTGACGGGC | + |
|
Preference number: 6 (lower is better) Translates to: LPVLSLTEVGAL*GLAAVVAILTG Trigger: GCCCGTCAGTATGGCCACTACCGCTGCGAGGCCCAAGAGGGCTCCTACCTCCGTGAGGCTCAACACTGGGAG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043059.9 |
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| CDS CAA 72 bp | GGCCAGTGCTCTGTCCTCTGGCAGCAGCTCCCAGTGTaGAGCCTCACGGAGGTAGGAGCCCTCTTGGGCCTC | + |
|
Preference number: 6 (lower is better) Translates to: GQCSVLWQQLPV*SLTEVGALLGL Trigger: GAGGCCCAAGAGGGCTCCTACCTCCGTGAGGCTCAACACTGGGAGCTGCTGCCAGAGGACAGAGCACTGGCC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043059.9 |
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| CDS CAA 90 bp | TGGCAGCAGCTCCCAGTGTTGAGCCTCACGGAGGTAGGAGCCCTCTaGGGCCTCGCAGCGGTAGTGGCCATACTGACGGGCCGTGAGGTT | + |
|
Preference number: 6 (lower is better) Translates to: WQQLPVLSLTEVGAL*GLAAVVAILTGREV Trigger: AACCTCACGGCCCGTCAGTATGGCCACTACCGCTGCGAGGCCCAAGAGGGCTCCTACCTCCGTGAGGCTCAACACTGGGAGCTGCTGCCA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043059.9 |
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| CDS GCA 72 bp | GTGTGTGGCTCAGGCTGGCTAAAGTCCACATGGTCCTaGCCTTTCCAGACGGCGGAGATGCGGGGTCCGCTC | + |
|
Preference number: 6 (lower is better) Translates to: VCGSGWLKSTWS*PFQTAEMRGPL Trigger: GAGCGGACCCCGCATCTCCGCCGTCTGGAAAGGGCAGGACCATGTGGACTTTAGCCAGCCTGAGCCACACAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043059.9 |
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| CDS CCA 72 bp | AGCACGGTGTGTGGCTCAGGCTGGCTAAAGTCCACATaGTCCTGCCCTTTCCAGACGGCGGAGATGCGGGGT | + |
|
Preference number: 6 (lower is better) Translates to: STVCGSGWLKST*SCPFQTAEMRG Trigger: ACCCCGCATCTCCGCCGTCTGGAAAGGGCAGGACCATGTGGACTTTAGCCAGCCTGAGCCACACACCGTGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043059.9 |
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| CDS TCA 72 bp | CCGTGCGCACAGAGGCATTCTTGCCCTCGGGGAAGTTaGAGTGGTAGACCTTGCCACGTCCACCCACCCAGA | + |
|
Preference number: 6 (lower is better) Translates to: PCAQRHSCPRGS*SGRPCHVHPPR Trigger: TCTGGGTGGGTGGACGTGGCAAGGTCTACCACTTCAACTTCCCCGAGGGCAAGAATGCCTCTGTGCGCACGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043059.9 |
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| CDS CCA 72 bp | CGTCCACCCACCCAGACAGAGAAGCTGCCCGGCTCATaGAAAAGCACGGTGTGTGGCTCAGGCTGGCTAAAG | + |
|
Preference number: 6 (lower is better) Translates to: RPPTQTEKLPGS*KSTVCGSGWLK Trigger: CTTTAGCCAGCCTGAGCCACACACCGTGCTTTTCCATGAGCCGGGCAGCTTCTCTGTCTGGGTGGGTGGACG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043059.9 |
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| CDS GCA 72 bp | TCACCAAGTTCCAGCAGCTGGGCTTCCGGGCATTGGTaGCACAGACCAGCAGCCCATTACCCCGCCTTTCTA | + |
|
Preference number: 6 (lower is better) Translates to: SPSSSSWASGHW*HRPAAHYPAFL Trigger: TAGAAAGGCGGGGTAATGGGCTGCTGGTCTGTGGCACCAATGCCCGGAAGCCCAGCTGCTGGAACTTGGTGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043059.9 |
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| CDS CCA 72 bp | CCCGGCTCATGGAAAAGCACGGTGTGTGGCTCAGGCTaGCTAAAGTCCACATGGTCCTGCCCTTTCCAGACG | + |
|
Preference number: 6 (lower is better) Translates to: PGSWKSTVCGSG*LKSTWSCPFQT Trigger: CGTCTGGAAAGGGCAGGACCATGTGGACTTTAGCCAGCCTGAGCCACACACCGTGCTTTTCCATGAGCCGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043059.9 |
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| CDS CCA 72 bp | AGAGAAGCTGCCCGGCTCATGGAAAAGCACGGTGTGTaGCTCAGGCTGGCTAAAGTCCACATGGTCCTGCCC | + |
|
Preference number: 6 (lower is better) Translates to: REAARLMEKHGV*LRLAKVHMVLP Trigger: GGGCAGGACCATGTGGACTTTAGCCAGCCTGAGCCACACACCGTGCTTTTCCATGAGCCGGGCAGCTTCTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043059.9 |
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| CDS CCA 72 bp | CATGGCGCCATAAGTAAGTGGCGTGGCGGGACTCCATaGGGCAGGTCAGGTAGTATCGAGAGTTCCGAGCCA | + |
|
Preference number: 6 (lower is better) Translates to: HGAISKWRGGTP*GRSGSIESSEP Trigger: TGGCTCGGAACTCTCGATACTACCTGACCTGCCCCATGGAGTCCCGCCACGCCACTTACTTATGGCGCCATG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043059.9 |
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| CDS CAA 72 bp | TCATTCACCAAGTTCCAGCAGCTGGGCTTCCGGGCATaGGTGCCACAGACCAGCAGCCCATTACCCCGCCTT | + |
|
Preference number: 6 (lower is better) Translates to: SFTKFQQLGFRA*VPQTSSPLPRL Trigger: AAGGCGGGGTAATGGGCTGCTGGTCTGTGGCACCAATGCCCGGAAGCCCAGCTGCTGGAACTTGGTGAATGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043059.9 |
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| CDS CAA 90 bp | CACTGGCCACTGGGGTCAGGGAGCAGGAAGACATCTTGCAGCCGATaGAAGTTCCTGTTGGTGGCTGCATCGCTGCAGACCAACATGGCT | + |
|
Preference number: 6 (lower is better) Translates to: HWPLGSGSRKTSCSR*KFLLVAASLQTNMA Trigger: AGCCATGTTGGTCTGCAGCGATGCAGCCACCAACAGGAACTTCAATCGGCTGCAAGATGTCTTCCTGCTCCCTGACCCCAGTGGCCAGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043059.9 |
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| CDS CAA 90 bp | CTGACGGGCCGTGAGGTTCTCAATGAACAGGATGCAGCTAGGGCTTaGGTGGCCTGGCTCACAGCTCTGTTCCACATTCTCCTCATGGCG | + |
|
Preference number: 6 (lower is better) Translates to: LTGREVLNEQDAARA*VAWLTALFHILLMA Trigger: CGCCATGAGGAGAATGTGGAACAGAGCTGTGAGCCAGGCCACCAAAGCCCTAGCTGCATCCTGTTCATTGAGAACCTCACGGCCCGTCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043059.9 |
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| CDS GCA 72 bp | CACTGGCCACTGGGGTCAGGGAGCAGGAAGACATCTTaGAGCCGATTGAAGTTCCTGTTGGTGGCTGCATCG | + |
|
Preference number: 6 (lower is better) Translates to: HWPLGSGSRKTS*SRLKFLLVAAS Trigger: CGATGCAGCCACCAACAGGAACTTCAATCGGCTGCAAGATGTCTTCCTGCTCCCTGACCCCAGTGGCCAGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043059.9 |
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| CDS CCA 72 bp | CAGTGGCCCCATAGGTTCCACCCTCTGAGCCACCTCTaGGTGACTATCAGCTACCTGGAAGGTTTCTGTGGG | + |
|
Preference number: 6 (lower is better) Translates to: QWPHRFHPLSHL*VTISYLEGFCG Trigger: CCCACAGAAACCTTCCAGGTAGCTGATAGTCACCCAGAGGTGGCTCAGAGGGTGGAACCTATGGGGCCACTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043059.9 |
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| CDS CAA 72 bp | CTGGGGTCAGGGAGCAGGAAGACATCTTGCAGCCGATaGAAGTTCCTGTTGGTGGCTGCATCGCTGCAGACC | + |
|
Preference number: 6 (lower is better) Translates to: LGSGSRKTSCSR*KFLLVAASLQT Trigger: GGTCTGCAGCGATGCAGCCACCAACAGGAACTTCAATCGGCTGCAAGATGTCTTCCTGCTCCCTGACCCCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043059.9 |
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| CDS CAA 72 bp | CCACTGGCCACTGGGGTCAGGGAGCAGGAAGACATCTaGCAGCCGATTGAAGTTCCTGTTGGTGGCTGCATC | + |
|
Preference number: 6 (lower is better) Translates to: PLATGVREQEDI*QPIEVPVGGCI Trigger: GATGCAGCCACCAACAGGAACTTCAATCGGCTGCAAGATGTCTTCCTGCTCCCTGACCCCAGTGGCCAGTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043059.9 |
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| CDS CAA 90 bp | ACCACACTGTCATTCACCAAGTTCCAGCAGCTGGGCTTCCGGGCATaGGTGCCACAGACCAGCAGCCCATTACCCCGCCTTTCTAGAAGA | + |
|
Preference number: 6 (lower is better) Translates to: TTLSFTKFQQLGFRA*VPQTSSPLPRLSRR Trigger: TCTTCTAGAAAGGCGGGGTAATGGGCTGCTGGTCTGTGGCACCAATGCCCGGAAGCCCAGCTGCTGGAACTTGGTGAATGACAGTGTGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043059.9 |
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| CDS TCA 72 bp | TGGGGTCAGGGAGCAGGAAGACATCTTGCAGCCGATTaGAGTTCCTGTTGGTGGCTGCATCGCTGCAGACCA | + |
|
Preference number: 6 (lower is better) Translates to: WGQGAGRHLAAD*SSCWWLHRCRP Trigger: TGGTCTGCAGCGATGCAGCCACCAACAGGAACTTCAATCGGCTGCAAGATGTCTTCCTGCTCCCTGACCCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043059.9 |
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| CDS CCA 72 bp | TCTGTTCCACATTCTCCTCATGGCGCCATAAGTAAGTaGCGTGGCGGGACTCCATGGGGCAGGTCAGGTAGT | + |
|
Preference number: 6 (lower is better) Translates to: SVPHSPHGAISK*RGGTPWGRSGS Trigger: ACTACCTGACCTGCCCCATGGAGTCCCGCCACGCCACTTACTTATGGCGCCATGAGGAGAATGTGGAACAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043059.9 |
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| CDS CAA 72 bp | CTACCTGGAAGGTTTCTGTGGGTATGGGCTGCTTTTTaGGGAGGCACATGCCAGGTCGAGGGTTGGGAAGGC | + |
|
Preference number: 6 (lower is better) Translates to: LPGRFLWVWAAF*GGTCQVEGWEG Trigger: GCCTTCCCAACCCTCGACCTGGCATGTGCCTCCCAAAAAAGCAGCCCATACCCACAGAAACCTTCCAGGTAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043059.9 |
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| CDS CAA 90 bp | GGGTCAGGGAGCAGGAAGACATCTTGCAGCCGATTGAAGTTCCTGTaGGTGGCTGCATCGCTGCAGACCAACATGGCTTTCAGGAAGGTG | + |
|
Preference number: 6 (lower is better) Translates to: GSGSRKTSCSRLKFL*VAASLQTNMAFRKV Trigger: CACCTTCCTGAAAGCCATGTTGGTCTGCAGCGATGCAGCCACCAACAGGAACTTCAATCGGCTGCAAGATGTCTTCCTGCTCCCTGACCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043059.9 |
||
| CDS CCA 72 bp | CTCAATGAACAGGATGCAGCTAGGGCTTTGGTGGCCTaGCTCACAGCTCTGTTCCACATTCTCCTCATGGCG | + |
|
Preference number: 6 (lower is better) Translates to: LNEQDAARALVA*LTALFHILLMA Trigger: CGCCATGAGGAGAATGTGGAACAGAGCTGTGAGCCAGGCCACCAAAGCCCTAGCTGCATCCTGTTCATTGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043059.9 |
||
| CDS CAA 72 bp | AATTCCCACAGTCCTGTTTGTCCTGACAGGACCCCTTaGTGGAGCCGATGTTCACCGTGCGCACAGAGGCAT | + |
|
Preference number: 6 (lower is better) Translates to: NSHSPVCPDRTP*WSRCSPCAQRH Trigger: ATGCCTCTGTGCGCACGGTGAACATCGGCTCCACAAAGGGGTCCTGTCAGGACAAACAGGACTGTGGGAATT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043059.9 |
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| CDS CAA 72 bp | AATTCCCACAGTCCTGTTTGTCCTGACAGGACCCCTTaGTGGAGCCGATGTTCACCTTTCCAGACGGCGGAG | + |
|
Preference number: 6 (lower is better) Translates to: NSHSPVCPDRTP*WSRCSPFQTAE Trigger: CTCCGCCGTCTGGAAAGGTGAACATCGGCTCCACAAAGGGGTCCTGTCAGGACAAACAGGACTGTGGGAATT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214314.2 |
||
| CDS GCA 72 bp | GGTCCTGGTCCCCTGATTCCACCACCTTGTGAATGGTaGCCCTGTCTGTGGTTAGATAAAGCACATGGAAGG | + |
|
Preference number: 6 (lower is better) Translates to: GPGPLIPPPCEW*PCLWLDKAHGR Trigger: CCTTCCATGTGCTTTATCTAACCACAGACAGGGGCACCATTCACAAGGTGGTGGAATCAGGGGACCAGGACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043059.9 |
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| CDS CCA 72 bp | GTATCGAGAGTTCCGAGCCAGGGAAACCTTCTGCAATaGAGCCTCGTCTGGTTTAGGGTTGGGACACTCTCT | + |
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Preference number: 6 (lower is better) Translates to: VSRVPSQGNLLQ*SLVWFRVGTLS Trigger: AGAGAGTGTCCCAACCCTAAACCAGACGAGGCTCCATTGCAGAAGGTTTCCCTGGCTCGGAACTCTCGATAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043059.9 |
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| CDS CCA 72 bp | GTGAGGTTCTCAATGAACAGGATGCAGCTAGGGCTTTaGTGGCCTGGCTCACAGCTCTGTTCCACATTCTCC | + |
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Preference number: 6 (lower is better) Translates to: VRFSMNRMQLGL*WPGSQLCSTFS Trigger: GGAGAATGTGGAACAGAGCTGTGAGCCAGGCCACCAAAGCCCTAGCTGCATCCTGTTCATTGAGAACCTCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043059.9 |
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| CDS CAA 72 bp | TCGCCCCGAATGCGTCGAAACCGAGGGATCTTCCCGTaGTATTCCTGCTTCCGGATGGTAGAGTACACTTCA | + |
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Preference number: 6 (lower is better) Translates to: SPRMRRNRGIFP*YSCFRMVEYTS Trigger: TGAAGTGTACTCTACCATCCGGAAGCAGGAATACAACGGGAAGATCCCTCGGTTTCGACGCATTCGGGGCGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043059.9 |
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| CDS CAA 72 bp | CGTGAGGTTCTCAATGAACAGGATGCAGCTAGGGCTTaGGTGGCCTGGCTCACAGCTCTGTTCCACATTCTC | + |
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Preference number: 6 (lower is better) Translates to: REVLNEQDAARA*VAWLTALFHIL Trigger: GAGAATGTGGAACAGAGCTGTGAGCCAGGCCACCAAAGCCCTAGCTGCATCCTGTTCATTGAGAACCTCACG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043059.9 |
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| CDS TCA 72 bp | CTCCTTCAAACAGAACCAGGGAGTTCTCATCCGGGCTaGAGGGGGCATAGCCTTTCATCTCACCAAGTGACA | + |
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Preference number: 6 (lower is better) Translates to: LLQTEPGSSHPG*RGHSLSSHQVT Trigger: TGTCACTTGGTGAGATGAAAGGCTATGCCCCCTTCAGCCCGGATGAGAACTCCCTGGTTCTGTTTGAAGGAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043059.9 |
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| CDS GCA 72 bp | GACATCTTGCAGCCGATTGAAGTTCCTGTTGGTGGCTaGATCGCTGCAGACCAACATGGCTTTCAGGAAGGT | + |
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Preference number: 6 (lower is better) Translates to: DILQPIEVPVGG*IAADQHGFQEG Trigger: ACCTTCCTGAAAGCCATGTTGGTCTGCAGCGATGCAGCCACCAACAGGAACTTCAATCGGCTGCAAGATGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043059.9 |
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| CDS CCA 72 bp | AGGTTCTCAATGAACAGGATGCAGCTAGGGCTTTGGTaGCCTGGCTCACAGCTCTGTTCCACATTCTCCTCA | + |
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Preference number: 6 (lower is better) Translates to: RFSMNRMQLGLW*PGSQLCSTFSS Trigger: TGAGGAGAATGTGGAACAGAGCTGTGAGCCAGGCCACCAAAGCCCTAGCTGCATCCTGTTCATTGAGAACCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043059.9 |
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| CDS CAA 90 bp | AGTTCACTCTCGCCCCGAATGCGTCGAAACCGAGGGATCTTCCCGTaGTATTCCTGCTTCCGGATGGTAGAGTACACTTCATCTCCTTCA | + |
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Preference number: 6 (lower is better) Translates to: SSLSPRMRRNRGIFP*YSCFRMVEYTSSPS Trigger: TGAAGGAGATGAAGTGTACTCTACCATCCGGAAGCAGGAATACAACGGGAAGATCCCTCGGTTTCGACGCATTCGGGGCGAGAGTGAACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043059.9 |
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| CDS TCA 72 bp | AGACCAGCAGCCCATTACCCCGCCTTTCTAGAAGAGTaGTGTAATTCCCACAGTCCTGTTTGTCCTGACAGG | + |
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Preference number: 6 (lower is better) Translates to: RPAAHYPAFLEE*CNSHSPVCPDR Trigger: CCTGTCAGGACAAACAGGACTGTGGGAATTACATCACTCTTCTAGAAAGGCGGGGTAATGGGCTGCTGGTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043059.9 |
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| CDS CCA 72 bp | GTAATGGTACTTAGAATGGAACAATGGTGTCTTCAGTaGCCCCATAGGTTCCACCCTCTGAGCCACCTCTGG | + |
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Preference number: 6 (lower is better) Translates to: VMVLRMEQWCLQ*PHRFHPLSHLW Trigger: CCAGAGGTGGCTCAGAGGGTGGAACCTATGGGGCCACTGAAGACACCATTGTTCCATTCTAAGTACCATTAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043059.9 |
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| CDS TCA 72 bp | CATGATATTGAAGACAAAGCTATGGTCCTGGTCCCCTaGTTCCACCACCTTGTGAATGGTGCCCCTGTCTGT | + |
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Preference number: 6 (lower is better) Translates to: HDIEDKAMVLVP*FHHLVNGAPVC Trigger: ACAGACAGGGGCACCATTCACAAGGTGGTGGAATCAGGGGACCAGGACCATAGCTTTGTCTTCAATATCATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043059.9 |
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| CDS TCA 72 bp | GCATCCAATGATATAGCCTGGATGGCCGCTGCACGGTaGAAGGGCTGGATCTCCATGATATTGAAGACAAAG | + |
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Preference number: 6 (lower is better) Translates to: ASNDIAWMAAAR*KGWISMILKTK Trigger: CTTTGTCTTCAATATCATGGAGATCCAGCCCTTTCACCGTGCAGCGGCCATCCAGGCTATATCATTGGATGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043059.9 |
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| CDS GCA 72 bp | ATGCGTCGAAACCGAGGGATCTTCCCGTTGTATTCCTaGTTCCGGATGGTAGAGTACACTTCATCTCCTTCA | + |
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Preference number: 6 (lower is better) Translates to: MRRNRGIFPLYS*FRMVEYTSSPS Trigger: TGAAGGAGATGAAGTGTACTCTACCATCCGGAAGCAGGAATACAACGGGAAGATCCCTCGGTTTCGACGCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043059.9 |
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| CDS GCA 72 bp | CTGTGGTTAGATAAAGCACATGGAAGGTCTCTCCATTaGTGGCTTGCATGCGGTGAACGACCACTTTCTGGT | + |
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Preference number: 6 (lower is better) Translates to: LWLDKAHGRSLH*WLACGERPLSG Trigger: ACCAGAAAGTGGTCGTTCACCGCATGCAAGCCAGCAATGGAGAGACCTTCCATGTGCTTTATCTAACCACAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043059.9 |
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| CDS CCA 72 bp | GACCACTTTCTGGTAATGGTACTTAGAATGGAACAATaGTGTCTTCAGTGGCCCCATAGGTTCCACCCTCTG | + |
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Preference number: 6 (lower is better) Translates to: DHFLVMVLRMEQ*CLQWPHRFHPL Trigger: CAGAGGGTGGAACCTATGGGGCCACTGAAGACACCATTGTTCCATTCTAAGTACCATTACCAGAAAGTGGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043059.9 |
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| CDS CCA 72 bp | TGGTTAGATAAAGCACATGGAAGGTCTCTCCATTGCTaGCTTGCATGCGGTGAACGACCACTTTCTGGTAAT | + |
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Preference number: 6 (lower is better) Translates to: WLDKAHGRSLHC*LACGERPLSGN Trigger: ATTACCAGAAAGTGGTCGTTCACCGCATGCAAGCCAGCAATGGAGAGACCTTCCATGTGCTTTATCTAACCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043059.9 |
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