RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SEMA6D (Mus musculus)

Ensembl gene IDs: ENSMUSG00000027200

Ensembl transcript IDs: ENSMUST00000051419.15, ENSMUST00000076335.12, ENSMUST00000077847.12, ENSMUST00000078621.12, ENSMUST00000103238.2, ENSMUST00000103239.10, ENSMUST00000103240.9, ENSMUST00000103241.8

Found 924 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp AGCAGGGGATGGAATGTTTATCATGGCAAGGGTGGGTGCTGCTTCTaGTCCTGGAGGGAAGGGGCGGCGTTGCTCAACAACAAATCGCTC +
Preference number: 1 (lower is better)
Translates to: SRGWNVYHGKGGCCF*SWREGAALLNNKSL
Trigger: GAGCGATTTGTTGTTGAGCAACGCCGCCCCTTCCCTCCAGGATCAGAAGCAGCACCCACCCTTGCCATGATAAACATTCCATCCCCTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103241.8
3UTR GCA 90 bp GCAAGGGTGGGTGCTGCTTCTGATCCTGGAGGGAAGGGGCGGCGTTaGTCAACAACAAATCGCTCTAGGTGGCTTTATGACTGTATAAGA +
Preference number: 1 (lower is better)
Translates to: ARVGAASDPGGKGRR*STTNRSRWLYDCIR
Trigger: TCTTATACAGTCATAAAGCCACCTAGAGCGATTTGTTGTTGAGCAACGCCGCCCCTTCCCTCCAGGATCAGAAGCAGCACCCACCCTTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103241.8
3UTR CCA 90 bp GAGCCTTCCCTGGCTACACATCCCTTCTGCTTCAAACGAAAGAAATaGAGTGAGCAGGACCTCCCTTCGTTTCCGGCAAGTACACAGAAG +
Preference number: 1 (lower is better)
Translates to: EPSLATHPFCFKRKK*SEQDLPSFPASTQK
Trigger: CTTCTGTGTACTTGCCGGAAACGAAGGGAGGTCCTGCTCACTCCATTTCTTTCGTTTGAAGCAGAAGGGATGTGTAGCCAGGGAAGGCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
3UTR TCA 90 bp TTCCCTGGCTACACATCCCTTCTGCTTCAAACGAAAGAAATGGAGTaGGCAGGACCTCCCTTCGTTTCCGGCAAGTACACAGAAGCCTTG +
Preference number: 1 (lower is better)
Translates to: FPGYTSLLLQTKEME*AGPPFVSGKYTEAL
Trigger: CAAGGCTTCTGTGTACTTGCCGGAAACGAAGGGAGGTCCTGCTCACTCCATTTCTTTCGTTTGAAGCAGAAGGGATGTGTAGCCAGGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
3UTR GCA 90 bp GTGATGTGCAGTGGGTTAACCAAAGCTGTCAGTAGGCTACACACCTaGAGCCATCAGTGGGCTCTGCCAAGCTACATAGAAACGACTCTA +
Preference number: 1 (lower is better)
Translates to: VMCSGLTKAVSRLHT*SHQWALPSYIETTL
Trigger: TAGAGTCGTTTCTATGTAGCTTGGCAGAGCCCACTGATGGCTGCAGGTGTGTAGCCTACTGACAGCTTTGGTTAACCCACTGCACATCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103241.8
3UTR GCA 90 bp GCTGTGGACATTTCTAGAGTAAGTTGGGTAAATGACTGGGTGATGTaGAGTGGGTTAACCAAAGCTGTCAGTAGGCTACACACCTGCAGC +
Preference number: 1 (lower is better)
Translates to: AVDISRVSWVNDWVM*SGLTKAVSRLHTCS
Trigger: GCTGCAGGTGTGTAGCCTACTGACAGCTTTGGTTAACCCACTGCACATCACCCAGTCATTTACCCAACTTACTCTAGAAATGTCCACAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103241.8
3UTR CCA 90 bp CTGAGTACTGTATCAGCTCTTTACACTGGTGAAGGGAGCCTTCCCTaGCTACACATCCCTTCTGCTTCAAACGAAAGAAATGGAGTGAGC +
Preference number: 1 (lower is better)
Translates to: LSTVSALYTGEGSLP*LHIPSASNERNGVS
Trigger: GCTCACTCCATTTCTTTCGTTTGAAGCAGAAGGGATGTGTAGCCAGGGAAGGCTCCCTTCACCAGTGTAAAGAGCTGATACAGTACTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
3UTR CCA 90 bp CATAGAAACGACTCTAGACATGGTTTCCGCAGGTGCCACATAACCTaGGAACCCTCATCTGACTTCACATTATCAGAACAGCAGGGGATG +
Preference number: 1 (lower is better)
Translates to: HRNDSRHGFRRCHIT*EPSSDFTLSEQQGM
Trigger: CATCCCCTGCTGTTCTGATAATGTGAAGTCAGATGAGGGTTCCCAGGTTATGTGGCACCTGCGGAAACCATGTCTAGAGTCGTTTCTATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103241.8
3UTR TCA 90 bp CCTCAGGTGCTGGCTGCAAAACATTTACAAGTGGCACATGGGAAATaGTGCTCTGTAGTGGAAACACTCAACATACCGCGGAACTTCTAC +
Preference number: 1 (lower is better)
Translates to: PQVLAAKHLQVAHGK*CSVVETLNIPRNFY
Trigger: GTAGAAGTTCCGCGGTATGTTGAGTGTTTCCACTACAGAGCATCATTTCCCATGTGCCACTTGTAAATGTTTTGCAGCCAGCACCTGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103241.8
3UTR TCA 90 bp GTATTTGTTCAGTCTTCTGAGTACTGTATCAGCTCTTTACACTGGTaGAGGGAGCCTTCCCTGGCTACACATCCCTTCTGCTTCAAACGA +
Preference number: 1 (lower is better)
Translates to: VFVQSSEYCISSLHW*REPSLATHPFCFKR
Trigger: TCGTTTGAAGCAGAAGGGATGTGTAGCCAGGGAAGGCTCCCTTCACCAGTGTAAAGAGCTGATACAGTACTCAGAAGACTGAACAAATAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
3UTR TCA 90 bp TCACATGTGGTATTTACAGTTCACTGTCACTGCCTGCATGACTCATaGGCAAAATCCTCACAGGACACACATGGAGGAAGGATCATCGAG +
Preference number: 1 (lower is better)
Translates to: SHVVFTVHCHCLHDS*AKSSQDTHGGRIIE
Trigger: CTCGATGATCCTTCCTCCATGTGTGTCCTGTGAGGATTTTGCTCATGAGTCATGCAGGCAGTGACAGTGAACTGTAAATACCACATGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103241.8
3UTR GCA 90 bp TCTGCCAAGCTACATAGAAACGACTCTAGACATGGTTTCCGCAGGTaGCACATAACCTGGGAACCCTCATCTGACTTCACATTATCAGAA +
Preference number: 1 (lower is better)
Translates to: SAKLHRNDSRHGFRR*HITWEPSSDFTLSE
Trigger: TTCTGATAATGTGAAGTCAGATGAGGGTTCCCAGGTTATGTGGCACCTGCGGAAACCATGTCTAGAGTCGTTTCTATGTAGCTTGGCAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103241.8
3UTR CCA 90 bp AAGAAGTCCTCAGGTGCTGGCTGCAAAACATTTACAAGTGGCACATaGGAAATGATGCTCTGTAGTGGAAACACTCAACATACCGCGGAA +
Preference number: 1 (lower is better)
Translates to: KKSSGAGCKTFTSGT*EMMLCSGNTQHTAE
Trigger: TTCCGCGGTATGTTGAGTGTTTCCACTACAGAGCATCATTTCCCATGTGCCACTTGTAAATGTTTTGCAGCCAGCACCTGAGGACTTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103241.8
3UTR CCA 90 bp CCTTCCTTAGCTGTGGACATTTCTAGAGTAAGTTGGGTAAATGACTaGGTGATGTGCAGTGGGTTAACCAAAGCTGTCAGTAGGCTACAC +
Preference number: 1 (lower is better)
Translates to: PSLAVDISRVSWVND*VMCSGLTKAVSRLH
Trigger: GTGTAGCCTACTGACAGCTTTGGTTAACCCACTGCACATCACCCAGTCATTTACCCAACTTACTCTAGAAATGTCCACAGCTAAGGAAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103241.8
3UTR TCA 90 bp TGGCAGTCTACATTGAACCCATTTTCAAGTATTTGTTCAGTCTTCTaGGTACTGTATCAGCTCTTTACACTGGTGAAGGGAGCCTTCCCT +
Preference number: 1 (lower is better)
Translates to: WQSTLNPFSSICSVF*VLYQLFTLVKGAFP
Trigger: AGGGAAGGCTCCCTTCACCAGTGTAAAGAGCTGATACAGTACTCAGAAGACTGAACAAATACTTGAAAATGGGTTCAATGTAGACTGCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
3UTR CCA 90 bp CAAGTACACAGAAGCCTTGCTGTAGTAGCTACATGTGGCAAGTTCTaGTGTTACCAAAGTGACAGAGTTTCTTTGGCTACTTGTTTCTCT +
Preference number: 1 (lower is better)
Translates to: QVHRSLAVVATCGKF*CYQSDRVSLATCFS
Trigger: AGAGAAACAAGTAGCCAAAGAAACTCTGTCACTTTGGTAACACCAGAACTTGCCACATGTAGCTACTACAGCAAGGCTTCTGTGTACTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
3UTR TCA 90 bp CCTTGCTGTAGTAGCTACATGTGGCAAGTTCTGGTGTTACCAAAGTaGCAGAGTTTCTTTGGCTACTTGTTTCTCTTAAAATACAAGCAG +
Preference number: 1 (lower is better)
Translates to: PCCSSYMWQVLVLPK*QSFFGYLFLLKYKQ
Trigger: CTGCTTGTATTTTAAGAGAAACAAGTAGCCAAAGAAACTCTGTCACTTTGGTAACACCAGAACTTGCCACATGTAGCTACTACAGCAAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
3UTR TCA 90 bp CGTGCCCCAGGCTTTGATTCACAGTGGACAGGTAAATGTTACTATTaGATACTGGTAGATACATCAAAGATACCTCTTAATTTCTCTAAG +
Preference number: 1 (lower is better)
Translates to: RAPGFDSQWTGKCYY*ILVDTSKIPLNFSK
Trigger: CTTAGAGAAATTAAGAGGTATCTTTGATGTATCTACCAGTATTCAATAGTAACATTTACCTGTCCACTGTGAATCAAAGCCTGGGGCACG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103241.8
3UTR CCA 90 bp CTACATGTGGCAAGTTCTGGTGTTACCAAAGTGACAGAGTTTCTTTaGCTACTTGTTTCTCTTAAAATACAAGCAGGTATCTCATCTGAA +
Preference number: 1 (lower is better)
Translates to: LHVASSGVTKVTEFL*LLVSLKIQAGISSE
Trigger: TTCAGATGAGATACCTGCTTGTATTTTAAGAGAAACAAGTAGCCAAAGAAACTCTGTCACTTTGGTAACACCAGAACTTGCCACATGTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
3UTR CCA 90 bp TCAGTCATGCTTACTGTAAACAACTCCATAGTACAAAAGATGCAATaGGCACCTAAATCAATTCTAATGGGTAGATCTCTCTCTCTCTCT +
Preference number: 1 (lower is better)
Translates to: SVMLTVNNSIVQKMQ*APKSILMGRSLSLS
Trigger: AGAGAGAGAGAGAGATCTACCCATTAGAATTGATTTAGGTGCCCATTGCATCTTTTGTACTATGGAGTTGTTTACAGTAAGCATGACTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103241.8
3UTR-3UTR CCA 90 bp GCAAGGGTGGGTGCTGCTTCTGATCCTGGAGGGAAGGGGCGGCGTTGCTCAACATTCAAACGAAAGAAATaGAGTGAGCAGGACCTCCCT +
Preference number: 2 (lower is better)
Translates to: ARVGAASDPGGKGRRCSTFKRKK*SEQDLP
Trigger: AGGGAGGTCCTGCTCACTCCATTTCTTTCGTTTGAA...TGTTGAGCAACGCCGCCCCTTCCCTCCAGGATCAGAAGCAGCACCCACCCTTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103241.8
3UTR-3UTR TCA 90 bp TCTGATCCTGGAGGGAAGGGGCGGCGTTGCTCAACAACAAATCGCTCTAGGTGGTGCCTGCATGACTCATaGGCAAAATCCTCACAGGAC +
Preference number: 2 (lower is better)
Translates to: SDPGGKGRRCSTTNRSRWCLHDS*AKSSQD
Trigger: GTCCTGTGAGGATTTTGCTCATGAGTCATGCAGGCA...CCACCTAGAGCGATTTGTTGTTGAGCAACGCCGCCCCTTCCCTCCAGGATCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103241.8
3UTR-3UTR CCA 90 bp GCAAGGGTGGGTGCTGCTTCTGATCCTGGAGGGAAGGGGCGGCGTTGCTCAACAACATGTGGCAAGTTCTaGTGTTACCAAAGTGACAGA +
Preference number: 2 (lower is better)
Translates to: ARVGAASDPGGKGRRCSTTCGKF*CYQSDR
Trigger: TCTGTCACTTTGGTAACACCAGAACTTGCCACATGT...TGTTGAGCAACGCCGCCCCTTCCCTCCAGGATCAGAAGCAGCACCCACCCTTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103241.8
3UTR-3UTR TCA 90 bp ATCCTGGAGGGAAGGGGCGGCGTTGCTCAACAACAAATCGCTCTAGGTGGCTTTCTGTCACTGCCTGCATaGCTCATGAGCAAAATCCTC +
Preference number: 2 (lower is better)
Translates to: ILEGRGGVAQQQIALGGFLSLPA*LMSKIL
Trigger: GAGGATTTTGCTCATGAGTCATGCAGGCAGTGACAG...AAAGCCACCTAGAGCGATTTGTTGTTGAGCAACGCCGCCCCTTCCCTCCAGGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103241.8
3UTR-3UTR GCA 90 bp CCCCCAAGTAATGCAGACCATGGTCACTGTCCCAAGATATCACTTGAACTCCGCCATGGTTTCCGCAGGTaGCACATAACCTGGGAACCC +
Preference number: 2 (lower is better)
Translates to: PPSNADHGHCPKISLELRHGFRR*HITWEP
Trigger: GGGTTCCCAGGTTATGTGGCACCTGCGGAAACCATG...GCGGAGTTCAAGTGATATCTTGGGACAGTGACCATGGTCTGCATTACTTGGGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103241.8
3UTR-3UTR TCA 90 bp TCTGATCCTGGAGGGAAGGGGCGGCGTTGCTCAACAACAAATCGCTCTAGGTGGCTGGTGTTACCAAAGTaGCAGAGTTTCTTTGGCTAC +
Preference number: 2 (lower is better)
Translates to: SDPGGKGRRCSTTNRSRWLVLPK*QSFFGY
Trigger: GTAGCCAAAGAAACTCTGTCACTTTGGTAACACCAG...CCACCTAGAGCGATTTGTTGTTGAGCAACGCCGCCCCTTCCCTCCAGGATCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103241.8
3UTR-3UTR TCA 90 bp GGAATGTTTATCATGGCAAGGGTGGGTGCTGCTTCTGATCCTGGAGGGAAGGGGCTGGTGTTACCAAAGTaGCAGAGTTTCTTTGGCTAC +
Preference number: 2 (lower is better)
Translates to: GMFIMARVGAASDPGGKGLVLPK*QSFFGY
Trigger: GTAGCCAAAGAAACTCTGTCACTTTGGTAACACCAG...CCCCTTCCCTCCAGGATCAGAAGCAGCACCCACCCTTGCCATGATAAACATTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103241.8
3UTR-3UTR TCA 90 bp CCCCCAAGTAATGCAGACCATGGTCACTGTCCCAAGATATCACTTGAACTCCGCCTGTCACTGCCTGCATaGCTCATGAGCAAAATCCTC +
Preference number: 2 (lower is better)
Translates to: PPSNADHGHCPKISLELRLSLPA*LMSKIL
Trigger: GAGGATTTTGCTCATGAGTCATGCAGGCAGTGACAG...GCGGAGTTCAAGTGATATCTTGGGACAGTGACCATGGTCTGCATTACTTGGGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103241.8
3UTR-3UTR CCA 90 bp GGAATGTTTATCATGGCAAGGGTGGGTGCTGCTTCTGATCCTGGAGGGAAGGGGGAAGACCACACAGAATaGCAGTCTACATTGAACCCA +
Preference number: 2 (lower is better)
Translates to: GMFIMARVGAASDPGGKGEDHTE*QSTLNP
Trigger: TGGGTTCAATGTAGACTGCCATTCTGTGTGGTCTTC...CCCCTTCCCTCCAGGATCAGAAGCAGCACCCACCCTTGCCATGATAAACATTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103241.8
3UTR-3UTR CCA 90 bp GGAATGTTTATCATGGCAAGGGTGGGTGCTGCTTCTGATCCTGGAGGGAAGGGGGAAGTCCTCAGGTGCTaGCTGCAAAACATTTACAAG +
Preference number: 2 (lower is better)
Translates to: GMFIMARVGAASDPGGKGEVLRC*LQNIYK
Trigger: CTTGTAAATGTTTTGCAGCCAGCACCTGAGGACTTC...CCCCTTCCCTCCAGGATCAGAAGCAGCACCCACCCTTGCCATGATAAACATTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103241.8
3UTR-3UTR CCA 90 bp CCCCCAAGTAATGCAGACCATGGTCACTGTCCCAAGATATCACTTGAACTCCGCAGGTGCCACATAACCTaGGAACCCTCATCTGACTTC +
Preference number: 2 (lower is better)
Translates to: PPSNADHGHCPKISLELRRCHIT*EPSSDF
Trigger: GAAGTCAGATGAGGGTTCCCAGGTTATGTGGCACCT...GCGGAGTTCAAGTGATATCTTGGGACAGTGACCATGGTCTGCATTACTTGGGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103241.8
3UTR-3UTR CCA 90 bp CCCCCAAGTAATGCAGACCATGGTCACTGTCCCAAGATATCACTTGAACTCCGCCTGGGTGATGTGCAGTaGGTTAACCAAAGCTGTCAG +
Preference number: 2 (lower is better)
Translates to: PPSNADHGHCPKISLELRLGDVQ*VNQSCQ
Trigger: CTGACAGCTTTGGTTAACCCACTGCACATCACCCAG...GCGGAGTTCAAGTGATATCTTGGGACAGTGACCATGGTCTGCATTACTTGGGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103241.8
3UTR-3UTR TCA 90 bp AGTGAGCAGGACCTCCCTTCGTTTCCGGCAAGTACACAGAAGCCTTGCTGTAGTCTGGTGTTACCAAAGTaGCAGAGTTTCTTTGGCTAC +
Preference number: 2 (lower is better)
Translates to: SEQDLPSFPASTQKPCCSLVLPK*QSFFGY
Trigger: GTAGCCAAAGAAACTCTGTCACTTTGGTAACACCAG...ACTACAGCAAGGCTTCTGTGTACTTGCCGGAAACGAAGGGAGGTCCTGCTCACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
3UTR-3UTR GCA 90 bp GGAATGTTTATCATGGCAAGGGTGGGTGCTGCTTCTGATCCTGGAGGGAAGGGGGCTACACATCCCTTCTaGTTCAAACGAAAGAAATGG +
Preference number: 2 (lower is better)
Translates to: GMFIMARVGAASDPGGKGATHPF*FKRKKW
Trigger: CCATTTCTTTCGTTTGAAGCAGAAGGGATGTGTAGC...CCCCTTCCCTCCAGGATCAGAAGCAGCACCCACCCTTGCCATGATAAACATTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103241.8
3UTR-3UTR GCA 90 bp GGAATGTTTATCATGGCAAGGGTGGGTGCTGCTTCTGATCCTGGAGGGAAGGGGTTCACTGTCACTGCCTaGATGACTCATGAGCAAAAT +
Preference number: 2 (lower is better)
Translates to: GMFIMARVGAASDPGGKGFTVTA*MTHEQN
Trigger: ATTTTGCTCATGAGTCATGCAGGCAGTGACAGTGAA...CCCCTTCCCTCCAGGATCAGAAGCAGCACCCACCCTTGCCATGATAAACATTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103241.8
3UTR-3UTR GCA 90 bp ATCCTGGAGGGAAGGGGCGGCGTTGCTCAACAACAAATCGCTCTAGGTGGCTTTTTCACTGTCACTGCCTaGATGACTCATGAGCAAAAT +
Preference number: 2 (lower is better)
Translates to: ILEGRGGVAQQQIALGGFFTVTA*MTHEQN
Trigger: ATTTTGCTCATGAGTCATGCAGGCAGTGACAGTGAA...AAAGCCACCTAGAGCGATTTGTTGTTGAGCAACGCCGCCCCTTCCCTCCAGGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103241.8
3UTR-3UTR TCA 90 bp TCTGATCCTGGAGGGAAGGGGCGGCGTTGCTCAACAACAAATCGCTCTAGGTGGAAGCTCATTTTGTTTTaGGACATTCCCATCTTTCCA +
Preference number: 2 (lower is better)
Translates to: SDPGGKGRRCSTTNRSRWKLILF*DIPIFP
Trigger: TGGAAAGATGGGAATGTCTCAAAACAAAATGAGCTT...CCACCTAGAGCGATTTGTTGTTGAGCAACGCCGCCCCTTCCCTCCAGGATCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103241.8
3UTR-3UTR GCA 90 bp CCTTCTGCTTCAAACGAAAGAAATGGAGTGAGCAGGACCTCCCTTCGTTTCCGGAGTACACAGAAGCCTTaGTGTAGTAGCTACATGTGG +
Preference number: 2 (lower is better)
Translates to: PSASNERNGVSRTSLRFRSTQKP*CSSYMW
Trigger: CCACATGTAGCTACTACAGCAAGGCTTCTGTGTACT...CCGGAAACGAAGGGAGGTCCTGCTCACTCCATTTCTTTCGTTTGAAGCAGAAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
3UTR-3UTR GCA 90 bp CCCCCAAGTAATGCAGACCATGGTCACTGTCCCAAGATATCACTTGAACTCCGCAGTACACAGAAGCCTTaGTGTAGTAGCTACATGTGG +
Preference number: 2 (lower is better)
Translates to: PPSNADHGHCPKISLELRSTQKP*CSSYMW
Trigger: CCACATGTAGCTACTACAGCAAGGCTTCTGTGTACT...GCGGAGTTCAAGTGATATCTTGGGACAGTGACCATGGTCTGCATTACTTGGGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103241.8
3UTR-3UTR TCA 90 bp AGTACTGTATCAGCTCTTTACACTGGTGAAGGGAGCCTTCCCTGGCTACACATCCTGGTGTTACCAAAGTaGCAGAGTTTCTTTGGCTAC +
Preference number: 2 (lower is better)
Translates to: STVSALYTGEGSLPWLHILVLPK*QSFFGY
Trigger: GTAGCCAAAGAAACTCTGTCACTTTGGTAACACCAG...GATGTGTAGCCAGGGAAGGCTCCCTTCACCAGTGTAAAGAGCTGATACAGTACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
3UTR-3UTR TCA 90 bp GGAATGTTTATCATGGCAAGGGTGGGTGCTGCTTCTGATCCTGGAGGGAAGGGGATTTGTTCAGTCTTCTaGGTACTGTATCAGCTCTTT +
Preference number: 2 (lower is better)
Translates to: GMFIMARVGAASDPGGKGICSVF*VLYQLF
Trigger: AAAGAGCTGATACAGTACTCAGAAGACTGAACAAAT...CCCCTTCCCTCCAGGATCAGAAGCAGCACCCACCCTTGCCATGATAAACATTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103241.8
3UTR-3UTR TCA 90 bp GGAATGTTTATCATGGCAAGGGTGGGTGCTGCTTCTGATCCTGGAGGGAAGGGGAAGCTCATTTTGTTTTaGGACATTCCCATCTTTCCA +
Preference number: 2 (lower is better)
Translates to: GMFIMARVGAASDPGGKGKLILF*DIPIFP
Trigger: TGGAAAGATGGGAATGTCTCAAAACAAAATGAGCTT...CCCCTTCCCTCCAGGATCAGAAGCAGCACCCACCCTTGCCATGATAAACATTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103241.8
3UTR-3UTR GCA 90 bp GAAGGGAGCCTTCCCTGGCTACACATCCCTTCTGCTTCAAACGAAAGAAATGGAAGTACACAGAAGCCTTaGTGTAGTAGCTACATGTGG +
Preference number: 2 (lower is better)
Translates to: EGSLPWLHIPSASNERNGSTQKP*CSSYMW
Trigger: CCACATGTAGCTACTACAGCAAGGCTTCTGTGTACT...TCCATTTCTTTCGTTTGAAGCAGAAGGGATGTGTAGCCAGGGAAGGCTCCCTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
3UTR-3UTR CCA 90 bp CCCCCAAGTAATGCAGACCATGGTCACTGTCCCAAGATATCACTTGAACTCCGCACATGTGGCAAGTTCTaGTGTTACCAAAGTGACAGA +
Preference number: 2 (lower is better)
Translates to: PPSNADHGHCPKISLELRTCGKF*CYQSDR
Trigger: TCTGTCACTTTGGTAACACCAGAACTTGCCACATGT...GCGGAGTTCAAGTGATATCTTGGGACAGTGACCATGGTCTGCATTACTTGGGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103241.8
3UTR-3UTR CCA 90 bp TCTGATCCTGGAGGGAAGGGGCGGCGTTGCTCAACAACAAATCGCTCTAGGTGGGTACAAAAGATGCAATaGGCACCTAAATCAATTCTA +
Preference number: 2 (lower is better)
Translates to: SDPGGKGRRCSTTNRSRWVQKMQ*APKSIL
Trigger: TAGAATTGATTTAGGTGCCCATTGCATCTTTTGTAC...CCACCTAGAGCGATTTGTTGTTGAGCAACGCCGCCCCTTCCCTCCAGGATCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103241.8
3UTR-3UTR TCA 90 bp CATCCCTTCTGCTTCAAACGAAAGAAATGGAGTGAGCAGGACCTCCCTTCGTTTCTGGTGTTACCAAAGTaGCAGAGTTTCTTTGGCTAC +
Preference number: 2 (lower is better)
Translates to: HPFCFKRKKWSEQDLPSFLVLPK*QSFFGY
Trigger: GTAGCCAAAGAAACTCTGTCACTTTGGTAACACCAG...AAACGAAGGGAGGTCCTGCTCACTCCATTTCTTTCGTTTGAAGCAGAAGGGATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
3UTR-3UTR CCA 90 bp GAAGGGAGCCTTCCCTGGCTACACATCCCTTCTGCTTCAAACGAAAGAAATGGAACATGTGGCAAGTTCTaGTGTTACCAAAGTGACAGA +
Preference number: 2 (lower is better)
Translates to: EGSLPWLHIPSASNERNGTCGKF*CYQSDR
Trigger: TCTGTCACTTTGGTAACACCAGAACTTGCCACATGT...TCCATTTCTTTCGTTTGAAGCAGAAGGGATGTGTAGCCAGGGAAGGCTCCCTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
3UTR-3UTR CCA 90 bp CTGGCTACACATCCCTTCTGCTTCAAACGAAAGAAATGGAGTGAGCAGGACCTCTGTAGTAGCTACATGTaGCAAGTTCTGGTGTTACCA +
Preference number: 2 (lower is better)
Translates to: LATHPFCFKRKKWSEQDLCSSYM*QVLVLP
Trigger: TGGTAACACCAGAACTTGCCACATGTAGCTACTACA...GAGGTCCTGCTCACTCCATTTCTTTCGTTTGAAGCAGAAGGGATGTGTAGCCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
3UTR-3UTR CCA 90 bp CTTCCCTGGCTACACATCCCTTCTGCTTCAAACGAAAGAAATGGAGTGAGCAGGTGTAGTAGCTACATGTaGCAAGTTCTGGTGTTACCA +
Preference number: 2 (lower is better)
Translates to: LPWLHIPSASNERNGVSRCSSYM*QVLVLP
Trigger: TGGTAACACCAGAACTTGCCACATGTAGCTACTACA...CCTGCTCACTCCATTTCTTTCGTTTGAAGCAGAAGGGATGTGTAGCCAGGGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
3UTR-3UTR CCA 90 bp ATCCTGGAGGGAAGGGGCGGCGTTGCTCAACAACAAATCGCTCTAGGTGGCTTTGTACAAAAGATGCAATaGGCACCTAAATCAATTCTA +
Preference number: 2 (lower is better)
Translates to: ILEGRGGVAQQQIALGGFVQKMQ*APKSIL
Trigger: TAGAATTGATTTAGGTGCCCATTGCATCTTTTGTAC...AAAGCCACCTAGAGCGATTTGTTGTTGAGCAACGCCGCCCCTTCCCTCCAGGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103241.8
3UTR-3UTR TCA 90 bp CCCCCAAGTAATGCAGACCATGGTCACTGTCCCAAGATATCACTTGAACTCCGCAAGCTCATTTTGTTTTaGGACATTCCCATCTTTCCA +
Preference number: 2 (lower is better)
Translates to: PPSNADHGHCPKISLELRKLILF*DIPIFP
Trigger: TGGAAAGATGGGAATGTCTCAAAACAAAATGAGCTT...GCGGAGTTCAAGTGATATCTTGGGACAGTGACCATGGTCTGCATTACTTGGGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103241.8
3UTR-3UTR TCA 90 bp CCCCCAAGTAATGCAGACCATGGTCACTGTCCCAAGATATCACTTGAACTCCGCGTTTGGGTCAAAGATTaGATTTTCAGCAAACTGCTT +
Preference number: 2 (lower is better)
Translates to: PPSNADHGHCPKISLELRVWVKD*IFSKLL
Trigger: AAGCAGTTTGCTGAAAATTCAATCTTTGACCCAAAC...GCGGAGTTCAAGTGATATCTTGGGACAGTGACCATGGTCTGCATTACTTGGGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103241.8
3UTR-3UTR CCA 90 bp AATGGAGTGAGCAGGACCTCCCTTCGTTTCCGGCAAGTACACAGAAGCCTTGCTGTGACAGAGTTTCTTTaGCTACTTGTTTCTCTTAAA +
Preference number: 2 (lower is better)
Translates to: NGVSRTSLRFRQVHRSLAVTEFL*LLVSLK
Trigger: TTTAAGAGAAACAAGTAGCCAAAGAAACTCTGTCAC...AGCAAGGCTTCTGTGTACTTGCCGGAAACGAAGGGAGGTCCTGCTCACTCCATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
3UTR-3UTR CCA 90 bp CTGGCTACACATCCCTTCTGCTTCAAACGAAAGAAATGGAGTGAGCAGGACCTCGTGACAGAGTTTCTTTaGCTACTTGTTTCTCTTAAA +
Preference number: 2 (lower is better)
Translates to: LATHPFCFKRKKWSEQDLVTEFL*LLVSLK
Trigger: TTTAAGAGAAACAAGTAGCCAAAGAAACTCTGTCAC...GAGGTCCTGCTCACTCCATTTCTTTCGTTTGAAGCAGAAGGGATGTGTAGCCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
3UTR-3UTR CCA 90 bp CTTCCCTGGCTACACATCCCTTCTGCTTCAAACGAAAGAAATGGAGTGAGCAGGGTGACAGAGTTTCTTTaGCTACTTGTTTCTCTTAAA +
Preference number: 2 (lower is better)
Translates to: LPWLHIPSASNERNGVSRVTEFL*LLVSLK
Trigger: TTTAAGAGAAACAAGTAGCCAAAGAAACTCTGTCAC...CCTGCTCACTCCATTTCTTTCGTTTGAAGCAGAAGGGATGTGTAGCCAGGGAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
3UTR-3UTR CCA 90 bp GCAAACAACATTGTTGGTGGCAGATGTGTAGTGCTTATTGTTGGTTGGTTTAATTTATCATGGCAAGGGTaGGTGCTGCTTCTGATCCTG +
Preference number: 2 (lower is better)
Translates to: ANNIVGGRCVVLIVGWFNLSWQG*VLLLIL
Trigger: CAGGATCAGAAGCAGCACCCACCCTTGCCATGATAA...ATTAAACCAACCAACAATAAGCACTACACATCTGCCACCAACAATGTTGTTTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103241.8
3UTR-3UTR TCA 90 bp GCAAACAACATTGTTGGTGGCAGATGTGTAGTGCTTATTGTTGGTTGGTTTAATAGTAAGTTGGGTAAATaGCTGGGTGATGTGCAGTGG +
Preference number: 2 (lower is better)
Translates to: ANNIVGGRCVVLIVGWFNSKLGK*LGDVQW
Trigger: CCACTGCACATCACCCAGTCATTTACCCAACTTACT...ATTAAACCAACCAACAATAAGCACTACACATCTGCCACCAACAATGTTGTTTGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103241.8
3UTR-3UTR TCA 90 bp GCAAACAACATTGTTGGTGGCAGATGTGTAGTGCTTATTGTTGGTTGGTTTAATCTGGGAACCCTCATCTaGCTTCACATTATCAGAACA +
Preference number: 2 (lower is better)
Translates to: ANNIVGGRCVVLIVGWFNLGTLI*LHIIRT
Trigger: TGTTCTGATAATGTGAAGTCAGATGAGGGTTCCCAG...ATTAAACCAACCAACAATAAGCACTACACATCTGCCACCAACAATGTTGTTTGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103241.8
3UTR-3UTR CCA 90 bp GCAAACAACATTGTTGGTGGCAGATGTGTAGTGCTTATTGTTGGTTGGTTTAATGAAGACCACACAGAATaGCAGTCTACATTGAACCCA +
Preference number: 2 (lower is better)
Translates to: ANNIVGGRCVVLIVGWFNEDHTE*QSTLNP
Trigger: TGGGTTCAATGTAGACTGCCATTCTGTGTGGTCTTC...ATTAAACCAACCAACAATAAGCACTACACATCTGCCACCAACAATGTTGTTTGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103241.8
3UTR-3UTR CCA 90 bp GCAAACAACATTGTTGGTGGCAGATGTGTAGTGCTTATTGTTGGTTGGTTTAATCAGAACAGCAGGGGATaGAATGTTTATCATGGCAAG +
Preference number: 2 (lower is better)
Translates to: ANNIVGGRCVVLIVGWFNQNSRG*NVYHGK
Trigger: CTTGCCATGATAAACATTCCATCCCCTGCTGTTCTG...ATTAAACCAACCAACAATAAGCACTACACATCTGCCACCAACAATGTTGTTTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103241.8
3UTR CAA 90 bp AGACCACACAGAATGGCAGTCTACATTGAACCCATTTTCAAGTATTaGTTCAGTCTTCTGAGTACTGTATCAGCTCTTTACACTGGTGAA +
Preference number: 2 (lower is better)
Translates to: RPHRMAVYIEPIFKY*FSLLSTVSALYTGE
Trigger: TTCACCAGTGTAAAGAGCTGATACAGTACTCAGAAGACTGAACAAATACTTGAAAATGGGTTCAATGTAGACTGCCATTCTGTGTGGTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
3UTR-3UTR GCA 90 bp GCAAACAACATTGTTGGTGGCAGATGTGTAGTGCTTATTGTTGGTTGGTTTAATGCTACACATCCCTTCTaGTTCAAACGAAAGAAATGG +
Preference number: 2 (lower is better)
Translates to: ANNIVGGRCVVLIVGWFNATHPF*FKRKKW
Trigger: CCATTTCTTTCGTTTGAAGCAGAAGGGATGTGTAGC...ATTAAACCAACCAACAATAAGCACTACACATCTGCCACCAACAATGTTGTTTGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103241.8
3UTR-3UTR CCA 90 bp CACAGAATGGCAGTCTACATTGAACCCATTTTCAAGTATTTGTTCAGTCTTCTGTGTAGTAGCTACATGTaGCAAGTTCTGGTGTTACCA +
Preference number: 2 (lower is better)
Translates to: HRMAVYIEPIFKYLFSLLCSSYM*QVLVLP
Trigger: TGGTAACACCAGAACTTGCCACATGTAGCTACTACA...CAGAAGACTGAACAAATACTTGAAAATGGGTTCAATGTAGACTGCCATTCTGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
3UTR-3UTR CCA 90 bp AAATTGCTACAGTTTGGGTCAAAGATTGAATTTTCAGCAAACTGCTTGGTAATCTTCAAACGAAAGAAATaGAGTGAGCAGGACCTCCCT +
Preference number: 2 (lower is better)
Translates to: KLLQFGSKIEFSANCLVIFKRKK*SEQDLP
Trigger: AGGGAGGTCCTGCTCACTCCATTTCTTTCGTTTGAA...GATTACCAAGCAGTTTGCTGAAAATTCAATCTTTGACCCAAACTGTAGCAATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
3UTR-3UTR TCA 90 bp GCAAACAACATTGTTGGTGGCAGATGTGTAGTGCTTATTGTTGGTTGGTTTAATAAGCTCATTTTGTTTTaGGACATTCCCATCTTTCCA +
Preference number: 2 (lower is better)
Translates to: ANNIVGGRCVVLIVGWFNKLILF*DIPIFP
Trigger: TGGAAAGATGGGAATGTCTCAAAACAAAATGAGCTT...ATTAAACCAACCAACAATAAGCACTACACATCTGCCACCAACAATGTTGTTTGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103241.8
3UTR-3UTR CCA 90 bp AAATTGCTACAGTTTGGGTCAAAGATTGAATTTTCAGCAAACTGCTTGGTAATCACATGTGGCAAGTTCTaGTGTTACCAAAGTGACAGA +
Preference number: 2 (lower is better)
Translates to: KLLQFGSKIEFSANCLVITCGKF*CYQSDR
Trigger: TCTGTCACTTTGGTAACACCAGAACTTGCCACATGT...GATTACCAAGCAGTTTGCTGAAAATTCAATCTTTGACCCAAACTGTAGCAATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
3UTR-3UTR CCA 90 bp GCAAACAACATTGTTGGTGGCAGATGTGTAGTGCTTATTGTTGGTTGGTTTAATATTTCTAGAGTAAGTTaGGTAAATGACTGGGTGATG +
Preference number: 2 (lower is better)
Translates to: ANNIVGGRCVVLIVGWFNISRVS*VNDWVM
Trigger: CATCACCCAGTCATTTACCCAACTTACTCTAGAAAT...ATTAAACCAACCAACAATAAGCACTACACATCTGCCACCAACAATGTTGTTTGC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103241.8
3UTR-3UTR CCA 90 bp GCAAACAACATTGTTGGTGGCAGATGTGTAGTGCTTATTGTTGGTTGGTTTAATGTGACAGAGTTTCTTTaGCTACTTGTTTCTCTTAAA +
Preference number: 2 (lower is better)
Translates to: ANNIVGGRCVVLIVGWFNVTEFL*LLVSLK
Trigger: TTTAAGAGAAACAAGTAGCCAAAGAAACTCTGTCAC...ATTAAACCAACCAACAATAAGCACTACACATCTGCCACCAACAATGTTGTTTGC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103241.8
3UTR-3UTR CCA 90 bp AAATTGCTACAGTTTGGGTCAAAGATTGAATTTTCAGCAAACTGCTTGGTAATCGTGACAGAGTTTCTTTaGCTACTTGTTTCTCTTAAA +
Preference number: 2 (lower is better)
Translates to: KLLQFGSKIEFSANCLVIVTEFL*LLVSLK
Trigger: TTTAAGAGAAACAAGTAGCCAAAGAAACTCTGTCAC...GATTACCAAGCAGTTTGCTGAAAATTCAATCTTTGACCCAAACTGTAGCAATTT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
3UTR CCA 72 bp GAACAGCAGGGGATGGAATGTTTATCATGGCAAGGGTaGGTGCTGCTTCTGATCCTGGAGGGAAGGGGCGGC +
Preference number: 3 (lower is better)
Translates to: EQQGMECLSWQG*VLLLILEGRGG
Trigger: GCCGCCCCTTCCCTCCAGGATCAGAAGCAGCACCCACCCTTGCCATGATAAACATTCCATCCCCTGCTGTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103241.8
3UTR-3UTR CAA 90 bp TCTGATCCTGGAGGGAAGGGGCGGCGTTGCTCAACAACAAATCGCTCTAGGTGGGGTTTCTCTTTTGCCTaGGGAGTTGGGGGTGAGAGG +
Preference number: 3 (lower is better)
Translates to: SDPGGKGRRCSTTNRSRWGFSFA*GVGGER
Trigger: CCTCTCACCCCCAACTCCCAAGGCAAAAGAGAAACC...CCACCTAGAGCGATTTGTTGTTGAGCAACGCCGCCCCTTCCCTCCAGGATCAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103241.8
3UTR TCA 72 bp TGGAATGTTTATCATGGCAAGGGTGGGTGCTGCTTCTaGTCCTGGAGGGAAGGGGCGGCGTTGCTCAACAAC +
Preference number: 3 (lower is better)
Translates to: WNVYHGKGGCCF*SWREGAALLNN
Trigger: GTTGTTGAGCAACGCCGCCCCTTCCCTCCAGGATCAGAAGCAGCACCCACCCTTGCCATGATAAACATTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103241.8
3UTR GCA 72 bp GGTGCTGCTTCTGATCCTGGAGGGAAGGGGCGGCGTTaGTCAACAACAAATCGCTCTAGGTGGCTTTATGAC +
Preference number: 3 (lower is better)
Translates to: GAASDPGGKGRR*STTNRSRWLYD
Trigger: GTCATAAAGCCACCTAGAGCGATTTGTTGTTGAGCAACGCCGCCCCTTCCCTCCAGGATCAGAAGCAGCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103241.8
3UTR-3UTR CAA 90 bp GCAAGGGTGGGTGCTGCTTCTGATCCTGGAGGGAAGGGGCGGCGTTGCTCAACATCCCATCTTTCCATTTaGACATTTGTGCAAGAGGCA +
Preference number: 3 (lower is better)
Translates to: ARVGAASDPGGKGRRCSTSHLSI*TFVQEA
Trigger: TGCCTCTTGCACAAATGTCAAAATGGAAAGATGGGA...TGTTGAGCAACGCCGCCCCTTCCCTCCAGGATCAGAAGCAGCACCCACCCTTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103241.8
3UTR-3UTR CAA 90 bp CCCCCAAGTAATGCAGACCATGGTCACTGTCCCAAGATATCACTTGAACTCCGCGGTTTCTCTTTTGCCTaGGGAGTTGGGGGTGAGAGG +
Preference number: 3 (lower is better)
Translates to: PPSNADHGHCPKISLELRGFSFA*GVGGER
Trigger: CCTCTCACCCCCAACTCCCAAGGCAAAAGAGAAACC...GCGGAGTTCAAGTGATATCTTGGGACAGTGACCATGGTCTGCATTACTTGGGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103241.8
3UTR-3UTR CAA 90 bp GCAAGGGTGGGTGCTGCTTCTGATCCTGGAGGGAAGGGGCGGCGTTGCTCAACAGAATGGCAGTCTACATaGAACCCATTTTCAAGTATT +
Preference number: 3 (lower is better)
Translates to: ARVGAASDPGGKGRRCSTEWQST*NPFSSI
Trigger: AATACTTGAAAATGGGTTCAATGTAGACTGCCATTC...TGTTGAGCAACGCCGCCCCTTCCCTCCAGGATCAGAAGCAGCACCCACCCTTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103241.8
3UTR TCA 72 bp CAGTCTTCTGAGTACTGTATCAGCTCTTTACACTGGTaGAGGGAGCCTTCCCTGGCTACACATCCCTTCTGC +
Preference number: 3 (lower is better)
Translates to: QSSEYCISSLHW*REPSLATHPFC
Trigger: GCAGAAGGGATGTGTAGCCAGGGAAGGCTCCCTTCACCAGTGTAAAGAGCTGATACAGTACTCAGAAGACTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
3UTR TCA 72 bp ATGGTCACTGTCCCAAGATATCACTTGAACTCCGCCTaGCTGGCTCAGGAGCCTTCCTTAGCTGTGGACATT +
Preference number: 3 (lower is better)
Translates to: MVTVPRYHLNSA*LAQEPSLAVDI
Trigger: AATGTCCACAGCTAAGGAAGGCTCCTGAGCCAGTCAGGCGGAGTTCAAGTGATATCTTGGGACAGTGACCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103241.8
3UTR GCA 72 bp AGTGGGTTAACCAAAGCTGTCAGTAGGCTACACACCTaGAGCCATCAGTGGGCTCTGCCAAGCTACATAGAA +
Preference number: 3 (lower is better)
Translates to: SGLTKAVSRLHT*SHQWALPSYIE
Trigger: TTCTATGTAGCTTGGCAGAGCCCACTGATGGCTGCAGGTGTGTAGCCTACTGACAGCTTTGGTTAACCCACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103241.8
3UTR-3UTR CAA 90 bp TCTGATCCTGGAGGGAAGGGGCGGCGTTGCTCAACAACAAATCGCTCTAGGTGGTCTTTTGTCCTACTTTaGGTTTCTCTTTTGCCTTGG +
Preference number: 3 (lower is better)
Translates to: SDPGGKGRRCSTTNRSRWSFVLL*VSLLPW
Trigger: CCAAGGCAAAAGAGAAACCAAAAGTAGGACAAAAGA...CCACCTAGAGCGATTTGTTGTTGAGCAACGCCGCCCCTTCCCTCCAGGATCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103241.8
3UTR TCA 72 bp TTTCCGCAGGTGCCACATAACCTGGGAACCCTCATCTaGCTTCACATTATCAGAACAGCAGGGGATGGAATG +
Preference number: 3 (lower is better)
Translates to: FPQVPHNLGTLI*LHIIRTAGDGM
Trigger: CATTCCATCCCCTGCTGTTCTGATAATGTGAAGTCAGATGAGGGTTCCCAGGTTATGTGGCACCTGCGGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103241.8
3UTR GCA 72 bp GACCTCCCTTCGTTTCCGGCAAGTACACAGAAGCCTTaGTGTAGTAGCTACATGTGGCAAGTTCTGGTGTTA +
Preference number: 3 (lower is better)
Translates to: DLPSFPASTQKP*CSSYMWQVLVL
Trigger: TAACACCAGAACTTGCCACATGTAGCTACTACAGCAAGGCTTCTGTGTACTTGCCGGAAACGAAGGGAGGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
3UTR CCA 72 bp AAGGGGCGGCGTTGCTCAACAACAAATCGCTCTAGGTaGCTTTATGACTGTATAAGAAGTCCTCAGGTGCTG +
Preference number: 3 (lower is better)
Translates to: KGRRCSTTNRSR*LYDCIRSPQVL
Trigger: CAGCACCTGAGGACTTCTTATACAGTCATAAAGCCACCTAGAGCGATTTGTTGTTGAGCAACGCCGCCCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103241.8
3UTR CCA 72 bp ACATTATCAGAACAGCAGGGGATGGAATGTTTATCATaGCAAGGGTGGGTGCTGCTTCTGATCCTGGAGGGA +
Preference number: 3 (lower is better)
Translates to: TLSEQQGMECLS*QGWVLLLILEG
Trigger: TCCCTCCAGGATCAGAAGCAGCACCCACCCTTGCCATGATAAACATTCCATCCCCTGCTGTTCTGATAATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103241.8
3UTR-3UTR CAA 90 bp TCTGATCCTGGAGGGAAGGGGCGGCGTTGCTCAACAACAAATCGCTCTAGGTGGGAATGGCAGTCTACATaGAACCCATTTTCAAGTATT +
Preference number: 3 (lower is better)
Translates to: SDPGGKGRRCSTTNRSRWEWQST*NPFSSI
Trigger: AATACTTGAAAATGGGTTCAATGTAGACTGCCATTC...CCACCTAGAGCGATTTGTTGTTGAGCAACGCCGCCCCTTCCCTCCAGGATCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103241.8
3UTR-3UTR CAA 90 bp ATCCTGGAGGGAAGGGGCGGCGTTGCTCAACAACAAATCGCTCTAGGTGGCTTTTCTTTTGTCCTACTTTaGGTTTCTCTTTTGCCTTGG +
Preference number: 3 (lower is better)
Translates to: ILEGRGGVAQQQIALGGFSFVLL*VSLLPW
Trigger: CCAAGGCAAAAGAGAAACCAAAAGTAGGACAAAAGA...AAAGCCACCTAGAGCGATTTGTTGTTGAGCAACGCCGCCCCTTCCCTCCAGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103241.8
3UTR TCA 72 bp TACACATCCCTTCTGCTTCAAACGAAAGAAATGGAGTaGGCAGGACCTCCCTTCGTTTCCGGCAAGTACACA +
Preference number: 3 (lower is better)
Translates to: YTSLLLQTKEME*AGPPFVSGKYT
Trigger: TGTGTACTTGCCGGAAACGAAGGGAGGTCCTGCTCACTCCATTTCTTTCGTTTGAAGCAGAAGGGATGTGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
3UTR CCA 72 bp CCTCATCTGACTTCACATTATCAGAACAGCAGGGGATaGAATGTTTATCATGGCAAGGGTGGGTGCTGCTTC +
Preference number: 3 (lower is better)
Translates to: PHLTSHYQNSRG*NVYHGKGGCCF
Trigger: GAAGCAGCACCCACCCTTGCCATGATAAACATTCCATCCCCTGCTGTTCTGATAATGTGAAGTCAGATGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103241.8
3UTR CCA 72 bp GACTCTAGACATGGTTTCCGCAGGTGCCACATAACCTaGGAACCCTCATCTGACTTCACATTATCAGAACAG +
Preference number: 3 (lower is better)
Translates to: DSRHGFRRCHIT*EPSSDFTLSEQ
Trigger: CTGTTCTGATAATGTGAAGTCAGATGAGGGTTCCCAGGTTATGTGGCACCTGCGGAAACCATGTCTAGAGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103241.8
3UTR-3UTR CAA 90 bp ATCCTGGAGGGAAGGGGCGGCGTTGCTCAACAACAAATCGCTCTAGGTGGCTTTCCCATTTTCAAGTATTaGTTCAGTCTTCTGAGTACT +
Preference number: 3 (lower is better)
Translates to: ILEGRGGVAQQQIALGGFPIFKY*FSLLST
Trigger: AGTACTCAGAAGACTGAACAAATACTTGAAAATGGG...AAAGCCACCTAGAGCGATTTGTTGTTGAGCAACGCCGCCCCTTCCCTCCAGGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103241.8
3UTR TCA 72 bp CTGGCTGCAAAACATTTACAAGTGGCACATGGGAAATaGTGCTCTGTAGTGGAAACACTCAACATACCGCGG +
Preference number: 3 (lower is better)
Translates to: LAAKHLQVAHGK*CSVVETLNIPR
Trigger: CCGCGGTATGTTGAGTGTTTCCACTACAGAGCATCATTTCCCATGTGCCACTTGTAAATGTTTTGCAGCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103241.8
3UTR CCA 72 bp GTATCAGCTCTTTACACTGGTGAAGGGAGCCTTCCCTaGCTACACATCCCTTCTGCTTCAAACGAAAGAAAT +
Preference number: 3 (lower is better)
Translates to: VSALYTGEGSLP*LHIPSASNERN
Trigger: ATTTCTTTCGTTTGAAGCAGAAGGGATGTGTAGCCAGGGAAGGCTCCCTTCACCAGTGTAAAGAGCTGATAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
3UTR-3UTR CAA 90 bp CCCCCAAGTAATGCAGACCATGGTCACTGTCCCAAGATATCACTTGAACTCCGCCCCATTTTCAAGTATTaGTTCAGTCTTCTGAGTACT +
Preference number: 3 (lower is better)
Translates to: PPSNADHGHCPKISLELRPIFKY*FSLLST
Trigger: AGTACTCAGAAGACTGAACAAATACTTGAAAATGGG...GCGGAGTTCAAGTGATATCTTGGGACAGTGACCATGGTCTGCATTACTTGGGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103241.8
3UTR GCA 72 bp ACTCACATGTGGTATTTACAGTTCACTGTCACTGCCTaGATGACTCATGAGCAAAATCCTCACAGGACACAC +
Preference number: 3 (lower is better)
Translates to: THMWYLQFTVTA*MTHEQNPHRTH
Trigger: GTGTGTCCTGTGAGGATTTTGCTCATGAGTCATGCAGGCAGTGACAGTGAACTGTAAATACCACATGTGAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103241.8
3UTR GCA 72 bp ATTTCTAGAGTAAGTTGGGTAAATGACTGGGTGATGTaGAGTGGGTTAACCAAAGCTGTCAGTAGGCTACAC +
Preference number: 3 (lower is better)
Translates to: ISRVSWVNDWVM*SGLTKAVSRLH
Trigger: GTGTAGCCTACTGACAGCTTTGGTTAACCCACTGCACATCACCCAGTCATTTACCCAACTTACTCTAGAAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103241.8
3UTR CCA 72 bp AGAAGCCTTGCTGTAGTAGCTACATGTGGCAAGTTCTaGTGTTACCAAAGTGACAGAGTTTCTTTGGCTACT +
Preference number: 3 (lower is better)
Translates to: RSLAVVATCGKF*CYQSDRVSLAT
Trigger: AGTAGCCAAAGAAACTCTGTCACTTTGGTAACACCAGAACTTGCCACATGTAGCTACTACAGCAAGGCTTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
3UTR TCA 72 bp AGTAGCTACATGTGGCAAGTTCTGGTGTTACCAAAGTaGCAGAGTTTCTTTGGCTACTTGTTTCTCTTAAAA +
Preference number: 3 (lower is better)
Translates to: SSYMWQVLVLPK*QSFFGYLFLLK
Trigger: TTTTAAGAGAAACAAGTAGCCAAAGAAACTCTGTCACTTTGGTAACACCAGAACTTGCCACATGTAGCTACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
3UTR CCA 72 bp CTTACTGTAAACAACTCCATAGTACAAAAGATGCAATaGGCACCTAAATCAATTCTAATGGGTAGATCTCTC +
Preference number: 3 (lower is better)
Translates to: LTVNNSIVQKMQ*APKSILMGRSL
Trigger: GAGAGATCTACCCATTAGAATTGATTTAGGTGCCCATTGCATCTTTTGTACTATGGAGTTGTTTACAGTAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103241.8
3UTR CCA 72 bp AATATTTTTAGTTGCAAAGCTGAAGGGTTTCAGCTTTaGAGCTTCCAGAAGATCACAGGGAATCATTTTTCT +
Preference number: 3 (lower is better)
Translates to: NIFSCKAEGFQL*SFQKITGNHFS
Trigger: AGAAAAATGATTCCCTGTGATCTTCTGGAAGCTCCAAAGCTGAAACCCTTCAGCTTTGCAACTAAAAATATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103241.8
3UTR-3UTR CAA 90 bp AAATTGCTACAGTTTGGGTCAAAGATTGAATTTTCAGCAAACTGCTTGGTAATCCAAGCTCATTTTGTTTaGAGACATTCCCATCTTTCC +
Preference number: 3 (lower is better)
Translates to: KLLQFGSKIEFSANCLVIQAHFV*RHSHLS
Trigger: GGAAAGATGGGAATGTCTCAAAACAAAATGAGCTTG...GATTACCAAGCAGTTTGCTGAAAATTCAATCTTTGACCCAAACTGTAGCAATTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
3UTR TCA 72 bp GGCTTTGATTCACAGTGGACAGGTAAATGTTACTATTaGATACTGGTAGATACATCAAAGATACCTCTTAAT +
Preference number: 3 (lower is better)
Translates to: GFDSQWTGKCYY*ILVDTSKIPLN
Trigger: ATTAAGAGGTATCTTTGATGTATCTACCAGTATTCAATAGTAACATTTACCTGTCCACTGTGAATCAAAGCC
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103241.8
CDS-3UTR TCA 90 bp GCAAGGGTGGGTGCTGCTTCTGATCCTGGAGGGAAGGGGCGGCGTTGCTCAACAGGGGTGTTCTTTCCTTaGAGCACCGTGGCTGTGGGC +
Preference number: 4 (lower is better)
Translates to: ARVGAASDPGGKGRRCSTGVFFP*STVAVG
Trigger: GCCCACAGCCACGGTGCTTCAAGGAAAGAACACCCC...TGTTGAGCAACGCCGCCCCTTCCCTCCAGGATCAGAAGCAGCACCCACCCTTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103241.8
CDS-3UTR CCA 90 bp GCAAGGGTGGGTGCTGCTTCTGATCCTGGAGGGAAGGGGCGGCGTTGCTCAACACTGCGAGGCCGTGTTTaGCACAACAGCCAGGCCTTG +
Preference number: 4 (lower is better)
Translates to: ARVGAASDPGGKGRRCSTLRGRV*HNSQAL
Trigger: CAAGGCCTGGCTGTTGTGCCAAACACGGCCTCGCAG...TGTTGAGCAACGCCGCCCCTTCCCTCCAGGATCAGAAGCAGCACCCACCCTTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103241.8
CDS-3UTR CCA 90 bp GCAAGGGTGGGTGCTGCTTCTGATCCTGGAGGGAAGGGGCGGCGTTGCTCAACATGGCAGTCCCCTAGGTaGGCTGTGTTGCCGTACTCC +
Preference number: 4 (lower is better)
Translates to: ARVGAASDPGGKGRRCSTWQSPR*AVLPYS
Trigger: GGAGTACGGCAACACAGCCCACCTAGGGGACTGCCA...TGTTGAGCAACGCCGCCCCTTCCCTCCAGGATCAGAAGCAGCACCCACCCTTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103241.8
CDS-3UTR CCA 90 bp GCAAGGGTGGGTGCTGCTTCTGATCCTGGAGGGAAGGGGCGGCGTTGCTCAACATGGCGAAGCTTCCGCTaGAGTCTGTGCACGACTGGG +
Preference number: 4 (lower is better)
Translates to: ARVGAASDPGGKGRRCSTWRSFR*SLCTTG
Trigger: CCCAGTCGTGCACAGACTCCAGCGGAAGCTTCGCCA...TGTTGAGCAACGCCGCCCCTTCCCTCCAGGATCAGAAGCAGCACCCACCCTTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103241.8
CDS-3UTR CCA 90 bp GCAAGGGTGGGTGCTGCTTCTGATCCTGGAGGGAAGGGGCGGCGTTGCTCAACAGAAGCACCGTGGCTGTaGGCCTTCTCAGAGTGGCTC +
Preference number: 4 (lower is better)
Translates to: ARVGAASDPGGKGRRCSTEAPWL*AFSEWL
Trigger: GAGCCACTCTGAGAAGGCCCACAGCCACGGTGCTTC...TGTTGAGCAACGCCGCCCCTTCCCTCCAGGATCAGAAGCAGCACCCACCCTTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103241.8
CDS-3UTR CCA 90 bp GCAAGGGTGGGTGCTGCTTCTGATCCTGGAGGGAAGGGGCGGCGTTGCTCAACACACCTTCGCCCCTGTTaGGGTGGGCATATAGCCTCC +
Preference number: 4 (lower is better)
Translates to: ARVGAASDPGGKGRRCSTHLRPC*GGHIAS
Trigger: GGAGGCTATATGCCCACCCCAACAGGGGCGAAGGTG...TGTTGAGCAACGCCGCCCCTTCCCTCCAGGATCAGAAGCAGCACCCACCCTTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103241.8
CDS-3UTR CCA 90 bp GCAAGGGTGGGTGCTGCTTCTGATCCTGGAGGGAAGGGGCGGCGTTGCTCAACATGCAGGGTCTTCTGGTaGAGGACAGGTGTGGATTCC +
Preference number: 4 (lower is better)
Translates to: ARVGAASDPGGKGRRCSTCRVFW*RTGVDS
Trigger: GGAATCCACACCTGTCCTCCACCAGAAGACCCTGCA...TGTTGAGCAACGCCGCCCCTTCCCTCCAGGATCAGAAGCAGCACCCACCCTTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103241.8
CDS-3UTR TCA 90 bp TCTGATCCTGGAGGGAAGGGGCGGCGTTGCTCAACAACAAATCGCTCTAGGTGGCTCCAGGACCCGCTGTaGGCCACCCATGTCGTTTTT +
Preference number: 4 (lower is better)
Translates to: SDPGGKGRRCSTTNRSRWLQDPL*ATHVVF
Trigger: AAAAACGACATGGGTGGCTCACAGCGGGTCCTGGAG...CCACCTAGAGCGATTTGTTGTTGAGCAACGCCGCCCCTTCCCTCCAGGATCAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103241.8
CDS-3UTR TCA 90 bp GGAATGTTTATCATGGCAAGGGTGGGTGCTGCTTCTGATCCTGGAGGGAAGGGGGGGGTGTTCTTTCCTTaGAGCACCGTGGCTGTGGGC +
Preference number: 4 (lower is better)
Translates to: GMFIMARVGAASDPGGKGGVFFP*STVAVG
Trigger: GCCCACAGCCACGGTGCTTCAAGGAAAGAACACCCC...CCCCTTCCCTCCAGGATCAGAAGCAGCACCCACCCTTGCCATGATAAACATTCC
58% GC, longest homopolymer 8 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103241.8
CDS-3UTR GCA 90 bp GCAAGGGTGGGTGCTGCTTCTGATCCTGGAGGGAAGGGGCGGCGTTGCTCAACACAATTTTCTCGATCCTaGTGTCTGGACCTCCACGTC +
Preference number: 4 (lower is better)
Translates to: ARVGAASDPGGKGRRCSTQFSRS*CLDLHV
Trigger: GACGTGGAGGTCCAGACAGCAGGATCGAGAAAATTG...TGTTGAGCAACGCCGCCCCTTCCCTCCAGGATCAGAAGCAGCACCCACCCTTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103241.8
CDS-3UTR CCA 90 bp ATCCTGGAGGGAAGGGGCGGCGTTGCTCAACAACAAATCGCTCTAGGTGGCTTTCTGCGAGGCCGTGTTTaGCACAACAGCCAGGCCTTG +
Preference number: 4 (lower is better)
Translates to: ILEGRGGVAQQQIALGGFLRGRV*HNSQAL
Trigger: CAAGGCCTGGCTGTTGTGCCAAACACGGCCTCGCAG...AAAGCCACCTAGAGCGATTTGTTGTTGAGCAACGCCGCCCCTTCCCTCCAGGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103241.8
CDS-3UTR CCA 90 bp GTACCCTCACAGCTTCCTCGCAACAGCAGGGACAGGATAAAGCCACACGGGAATTGGCAGTCCCCTAGGTaGGCTGTGTTGCCGTACTCC +
Preference number: 4 (lower is better)
Translates to: VPSQLPRNSRDRIKPHGNWQSPR*AVLPYS
Trigger: GGAGTACGGCAACACAGCCCACCTAGGGGACTGCCA...ATTCCCGTGTGGCTTTATCCTGTCCCTGCTGTTGCGAGGAAGCTGTGAGGGTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR TCA 90 bp GCAAGGGTGGGTGCTGCTTCTGATCCTGGAGGGAAGGGGCGGCGTTGCTCAACAATTTTCAACATCAGCTaGAAGTCCAGCCTGTGCTGC +
Preference number: 4 (lower is better)
Translates to: ARVGAASDPGGKGRRCSTIFNIS*KSSLCC
Trigger: GCAGCACAGGCTGGACTTTCAGCTGATGTTGAAAAT...TGTTGAGCAACGCCGCCCCTTCCCTCCAGGATCAGAAGCAGCACCCACCCTTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103241.8
CDS-3UTR TCA 90 bp GTACCCTCACAGCTTCCTCGCAACAGCAGGGACAGGATAAAGCCACACGGGAATCTCCAGGACCCGCTGTaGGCCACCCATGTCGTTTTT +
Preference number: 4 (lower is better)
Translates to: VPSQLPRNSRDRIKPHGNLQDPL*ATHVVF
Trigger: AAAAACGACATGGGTGGCTCACAGCGGGTCCTGGAG...ATTCCCGTGTGGCTTTATCCTGTCCCTGCTGTTGCGAGGAAGCTGTGAGGGTAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR TCA 90 bp AATGGAGTGAGCAGGACCTCCCTTCGTTTCCGGCAAGTACACAGAAGCCTTGCTGGGGTGTTCTTTCCTTaGAGCACCGTGGCTGTGGGC +
Preference number: 4 (lower is better)
Translates to: NGVSRTSLRFRQVHRSLAGVFFP*STVAVG
Trigger: GCCCACAGCCACGGTGCTTCAAGGAAAGAACACCCC...AGCAAGGCTTCTGTGTACTTGCCGGAAACGAAGGGAGGTCCTGCTCACTCCATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR GCA 90 bp GCAAGGGTGGGTGCTGCTTCTGATCCTGGAGGGAAGGGGCGGCGTTGCTCAACAATCAAACGGGCATCGTaGCAGGCCACTAATTTCTTC +
Preference number: 4 (lower is better)
Translates to: ARVGAASDPGGKGRRCSTIKRAS*QATNFF
Trigger: GAAGAAATTAGTGGCCTGGCACGATGCCCGTTTGAT...TGTTGAGCAACGCCGCCCCTTCCCTCCAGGATCAGAAGCAGCACCCACCCTTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103241.8
CDS-3UTR GCA 90 bp GGAATGTTTATCATGGCAAGGGTGGGTGCTGCTTCTGATCCTGGAGGGAAGGGGTTCCGCTGGAGTCTGTaGACGACTGGGCGGATTCTG +
Preference number: 4 (lower is better)
Translates to: GMFIMARVGAASDPGGKGFRWSL*TTGRIL
Trigger: CAGAATCCGCCCAGTCGTGCACAGACTCCAGCGGAA...CCCCTTCCCTCCAGGATCAGAAGCAGCACCCACCCTTGCCATGATAAACATTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103241.8
CDS-3UTR CCA 90 bp GTGAGCAGGACCTCCCTTCGTTTCCGGCAAGTACACAGAAGCCTTGCTGTAGTACTGCGAGGCCGTGTTTaGCACAACAGCCAGGCCTTG +
Preference number: 4 (lower is better)
Translates to: VSRTSLRFRQVHRSLAVVLRGRV*HNSQAL
Trigger: CAAGGCCTGGCTGTTGTGCCAAACACGGCCTCGCAG...TACTACAGCAAGGCTTCTGTGTACTTGCCGGAAACGAAGGGAGGTCCTGCTCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CCA 90 bp GGAATGTTTATCATGGCAAGGGTGGGTGCTGCTTCTGATCCTGGAGGGAAGGGGCTCATCGGCAATGGGTaGGACGGCAGAGTCCATCAG +
Preference number: 4 (lower is better)
Translates to: GMFIMARVGAASDPGGKGLIGNG*DGRVHQ
Trigger: CTGATGGACTCTGCCGTCCCACCCATTGCCGATGAG...CCCCTTCCCTCCAGGATCAGAAGCAGCACCCACCCTTGCCATGATAAACATTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103241.8
CDS-3UTR CCA 90 bp ATCCTGGAGGGAAGGGGCGGCGTTGCTCAACAACAAATCGCTCTAGGTGGCTTTCTCATCGGCAATGGGTaGGACGGCAGAGTCCATCAG +
Preference number: 4 (lower is better)
Translates to: ILEGRGGVAQQQIALGGFLIGNG*DGRVHQ
Trigger: CTGATGGACTCTGCCGTCCCACCCATTGCCGATGAG...AAAGCCACCTAGAGCGATTTGTTGTTGAGCAACGCCGCCCCTTCCCTCCAGGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103241.8
CDS-3UTR CCA 90 bp GTACCCTCACAGCTTCCTCGCAACAGCAGGGACAGGATAAAGCCACACGGGAATCTCATCGGCAATGGGTaGGACGGCAGAGTCCATCAG +
Preference number: 4 (lower is better)
Translates to: VPSQLPRNSRDRIKPHGNLIGNG*DGRVHQ
Trigger: CTGATGGACTCTGCCGTCCCACCCATTGCCGATGAG...ATTCCCGTGTGGCTTTATCCTGTCCCTGCTGTTGCGAGGAAGCTGTGAGGGTAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CCA 90 bp AATGGAGTGAGCAGGACCTCCCTTCGTTTCCGGCAAGTACACAGAAGCCTTGCTTGGCAGTCCCCTAGGTaGGCTGTGTTGCCGTACTCC +
Preference number: 4 (lower is better)
Translates to: NGVSRTSLRFRQVHRSLAWQSPR*AVLPYS
Trigger: GGAGTACGGCAACACAGCCCACCTAGGGGACTGCCA...AGCAAGGCTTCTGTGTACTTGCCGGAAACGAAGGGAGGTCCTGCTCACTCCATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CCA 90 bp GGAATGTTTATCATGGCAAGGGTGGGTGCTGCTTCTGATCCTGGAGGGAAGGGGGCCTGCAGGGTCTTCTaGTGGAGGACAGGTGTGGAT +
Preference number: 4 (lower is better)
Translates to: GMFIMARVGAASDPGGKGACRVF*WRTGVD
Trigger: ATCCACACCTGTCCTCCACCAGAAGACCCTGCAGGC...CCCCTTCCCTCCAGGATCAGAAGCAGCACCCACCCTTGCCATGATAAACATTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103241.8
CDS-3UTR CCA 90 bp TCTGATCCTGGAGGGAAGGGGCGGCGTTGCTCAACAACAAATCGCTCTAGGTGGCAGAGTGGCTCTTCATaGCCTGCAGGGTCTTCTGGT +
Preference number: 4 (lower is better)
Translates to: SDPGGKGRRCSTTNRSRWQSGSS*PAGSSG
Trigger: ACCAGAAGACCCTGCAGGCCATGAAGAGCCACTCTG...CCACCTAGAGCGATTTGTTGTTGAGCAACGCCGCCCCTTCCCTCCAGGATCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103241.8
CDS-3UTR CCA 90 bp TCTGATCCTGGAGGGAAGGGGCGGCGTTGCTCAACAACAAATCGCTCTAGGTGGTGGTTGGACTATTTCTaGGGAGTGTGGAGGGAGGGG +
Preference number: 4 (lower is better)
Translates to: SDPGGKGRRCSTTNRSRWWLDYF*GVWREG
Trigger: CCCCTCCCTCCACACTCCCCAGAAATAGTCCAACCA...CCACCTAGAGCGATTTGTTGTTGAGCAACGCCGCCCCTTCCCTCCAGGATCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103241.8
CDS-3UTR CCA 90 bp ATCCTGGAGGGAAGGGGCGGCGTTGCTCAACAACAAATCGCTCTAGGTGGCTTTGCACCCCAGGAGTGGTaGGGACATCTACTCTCTTGG +
Preference number: 4 (lower is better)
Translates to: ILEGRGGVAQQQIALGGFAPQEW*GHLLSW
Trigger: CCAAGAGAGTAGATGTCCCCACCACTCCTGGGGTGC...AAAGCCACCTAGAGCGATTTGTTGTTGAGCAACGCCGCCCCTTCCCTCCAGGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103241.8
CDS-3UTR CCA 90 bp AATGGAGTGAGCAGGACCTCCCTTCGTTTCCGGCAAGTACACAGAAGCCTTGCTCACCTTCGCCCCTGTTaGGGTGGGCATATAGCCTCC +
Preference number: 4 (lower is better)
Translates to: NGVSRTSLRFRQVHRSLAHLRPC*GGHIAS
Trigger: GGAGGCTATATGCCCACCCCAACAGGGGCGAAGGTG...AGCAAGGCTTCTGTGTACTTGCCGGAAACGAAGGGAGGTCCTGCTCACTCCATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CCA 90 bp GTGAGCAGGACCTCCCTTCGTTTCCGGCAAGTACACAGAAGCCTTGCTGTAGTACACCTTCGCCCCTGTTaGGGTGGGCATATAGCCTCC +
Preference number: 4 (lower is better)
Translates to: VSRTSLRFRQVHRSLAVVHLRPC*GGHIAS
Trigger: GGAGGCTATATGCCCACCCCAACAGGGGCGAAGGTG...TACTACAGCAAGGCTTCTGTGTACTTGCCGGAAACGAAGGGAGGTCCTGCTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CCA 90 bp TCTGATCCTGGAGGGAAGGGGCGGCGTTGCTCAACAACAAATCGCTCTAGGTGGTCTTTAGTCCCGTCCTaGGGAGGGTGCCATTACTGG +
Preference number: 4 (lower is better)
Translates to: SDPGGKGRRCSTTNRSRWSLVPS*GGCHYW
Trigger: CCAGTAATGGCACCCTCCCCAGGACGGGACTAAAGA...CCACCTAGAGCGATTTGTTGTTGAGCAACGCCGCCCCTTCCCTCCAGGATCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103241.8
CDS-3UTR TCA 90 bp AATGGAGTGAGCAGGACCTCCCTTCGTTTCCGGCAAGTACACAGAAGCCTTGCTCTCCAGGACCCGCTGTaGGCCACCCATGTCGTTTTT +
Preference number: 4 (lower is better)
Translates to: NGVSRTSLRFRQVHRSLALQDPL*ATHVVF
Trigger: AAAAACGACATGGGTGGCTCACAGCGGGTCCTGGAG...AGCAAGGCTTCTGTGTACTTGCCGGAAACGAAGGGAGGTCCTGCTCACTCCATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR GCA 90 bp GTACCCTCACAGCTTCCTCGCAACAGCAGGGACAGGATAAAGCCACACGGGAATAAGTCCAGCCTGTGCTaGGATTCGTTGCCTGAAGGG +
Preference number: 4 (lower is better)
Translates to: VPSQLPRNSRDRIKPHGNKSSLC*DSLPEG
Trigger: CCCTTCAGGCAACGAATCGCAGCACAGGCTGGACTT...ATTCCCGTGTGGCTTTATCCTGTCCCTGCTGTTGCGAGGAAGCTGTGAGGGTAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR GCA 90 bp TCTGATCCTGGAGGGAAGGGGCGGCGTTGCTCAACAACAAATCGCTCTAGGTGGGGTCTTGTAAGCTTCTaGGAGGCCGTGTTTGGCACA +
Preference number: 4 (lower is better)
Translates to: SDPGGKGRRCSTTNRSRWGLVSF*EAVFGT
Trigger: TGTGCCAAACACGGCCTCGCAGAAGCTTACAAGACC...CCACCTAGAGCGATTTGTTGTTGAGCAACGCCGCCCCTTCCCTCCAGGATCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103241.8
CDS-3UTR GCA 90 bp GTGAGCAGGACCTCCCTTCGTTTCCGGCAAGTACACAGAAGCCTTGCTGTAGTATTCCGCTGGAGTCTGTaGACGACTGGGCGGATTCTG +
Preference number: 4 (lower is better)
Translates to: VSRTSLRFRQVHRSLAVVFRWSL*TTGRIL
Trigger: CAGAATCCGCCCAGTCGTGCACAGACTCCAGCGGAA...TACTACAGCAAGGCTTCTGTGTACTTGCCGGAAACGAAGGGAGGTCCTGCTCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR GCA 90 bp GTGAGCAGGACCTCCCTTCGTTTCCGGCAAGTACACAGAAGCCTTGCTGTAGTATGGCTCTTCATGGCCTaGAGGGTCTTCTGGTGGAGG +
Preference number: 4 (lower is better)
Translates to: VSRTSLRFRQVHRSLAVVWLFMA*RVFWWR
Trigger: CCTCCACCAGAAGACCCTGCAGGCCATGAAGAGCCA...TACTACAGCAAGGCTTCTGTGTACTTGCCGGAAACGAAGGGAGGTCCTGCTCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR GCA 90 bp CCTTCTGCTTCAAACGAAAGAAATGGAGTGAGCAGGACCTCCCTTCGTTTCCGGTCCACAGACCGCCGGTaGTCCCGCTTACTGGATGAC +
Preference number: 4 (lower is better)
Translates to: PSASNERNGVSRTSLRFRSTDRR*SRLLDD
Trigger: GTCATCCAGTAAGCGGGAGCACCGGCGGTCTGTGGA...CCGGAAACGAAGGGAGGTCCTGCTCACTCCATTTCTTTCGTTTGAAGCAGAAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CCA 90 bp ATCCTGGAGGGAAGGGGCGGCGTTGCTCAACAACAAATCGCTCTAGGTGGCTTTCAGAGTGGCTCTTCATaGCCTGCAGGGTCTTCTGGT +
Preference number: 4 (lower is better)
Translates to: ILEGRGGVAQQQIALGGFQSGSS*PAGSSG
Trigger: ACCAGAAGACCCTGCAGGCCATGAAGAGCCACTCTG...AAAGCCACCTAGAGCGATTTGTTGTTGAGCAACGCCGCCCCTTCCCTCCAGGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103241.8
CDS-3UTR CCA 90 bp GGAATGTTTATCATGGCAAGGGTGGGTGCTGCTTCTGATCCTGGAGGGAAGGGGCAGAGTGGCTCTTCATaGCCTGCAGGGTCTTCTGGT +
Preference number: 4 (lower is better)
Translates to: GMFIMARVGAASDPGGKGQSGSS*PAGSSG
Trigger: ACCAGAAGACCCTGCAGGCCATGAAGAGCCACTCTG...CCCCTTCCCTCCAGGATCAGAAGCAGCACCCACCCTTGCCATGATAAACATTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103241.8
CDS-3UTR CCA 90 bp GTGAGCAGGACCTCCCTTCGTTTCCGGCAAGTACACAGAAGCCTTGCTGTAGTATGGGCCTTCTCAGAGTaGCTCTTCATGGCCTGCAGG +
Preference number: 4 (lower is better)
Translates to: VSRTSLRFRQVHRSLAVVWAFSE*LFMACR
Trigger: CCTGCAGGCCATGAAGAGCCACTCTGAGAAGGCCCA...TACTACAGCAAGGCTTCTGTGTACTTGCCGGAAACGAAGGGAGGTCCTGCTCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CCA 90 bp CCCCCAAGTAATGCAGACCATGGTCACTGTCCCAAGATATCACTTGAACTCCGCGAAGCACCGTGGCTGTaGGCCTTCTCAGAGTGGCTC +
Preference number: 4 (lower is better)
Translates to: PPSNADHGHCPKISLELREAPWL*AFSEWL
Trigger: GAGCCACTCTGAGAAGGCCCACAGCCACGGTGCTTC...GCGGAGTTCAAGTGATATCTTGGGACAGTGACCATGGTCTGCATTACTTGGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103241.8
CDS-3UTR CCA 90 bp ATCCTGGAGGGAAGGGGCGGCGTTGCTCAACAACAAATCGCTCTAGGTGGCTTTTTCCTTGAAGCACCGTaGCTGTGGGCCTTCTCAGAG +
Preference number: 4 (lower is better)
Translates to: ILEGRGGVAQQQIALGGFFLEAP*LWAFSE
Trigger: CTCTGAGAAGGCCCACAGCCACGGTGCTTCAAGGAA...AAAGCCACCTAGAGCGATTTGTTGTTGAGCAACGCCGCCCCTTCCCTCCAGGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103241.8
CDS-3UTR CCA 90 bp TCTGATCCTGGAGGGAAGGGGCGGCGTTGCTCAACAACAAATCGCTCTAGGTGGGAAGAACGATGGCACTaGGGATATGCCCGTGACTCA +
Preference number: 4 (lower is better)
Translates to: SDPGGKGRRCSTTNRSRWEERWH*GYARDS
Trigger: TGAGTCACGGGCATATCCCCAGTGCCATCGTTCTTC...CCACCTAGAGCGATTTGTTGTTGAGCAACGCCGCCCCTTCCCTCCAGGATCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103241.8
CDS-3UTR CCA 90 bp GGAATGTTTATCATGGCAAGGGTGGGTGCTGCTTCTGATCCTGGAGGGAAGGGGGTCGTGAGTGGCGTTTaGAAGAACGATGGCACTGGG +
Preference number: 4 (lower is better)
Translates to: GMFIMARVGAASDPGGKGVVSGV*KNDGTG
Trigger: CCCAGTGCCATCGTTCTTCCAAACGCCACTCACGAC...CCCCTTCCCTCCAGGATCAGAAGCAGCACCCACCCTTGCCATGATAAACATTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103241.8
CDS-3UTR CCA 90 bp ATCCTGGAGGGAAGGGGCGGCGTTGCTCAACAACAAATCGCTCTAGGTGGCTTTTGGTTGGACTATTTCTaGGGAGTGTGGAGGGAGGGG +
Preference number: 4 (lower is better)
Translates to: ILEGRGGVAQQQIALGGFWLDYF*GVWREG
Trigger: CCCCTCCCTCCACACTCCCCAGAAATAGTCCAACCA...AAAGCCACCTAGAGCGATTTGTTGTTGAGCAACGCCGCCCCTTCCCTCCAGGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103241.8
CDS-3UTR CCA 90 bp GCAAGGGTGGGTGCTGCTTCTGATCCTGGAGGGAAGGGGCGGCGTTGCTCAACAGGACATCTACTCTCTTaGTTGGACTATTTCTGGGGA +
Preference number: 4 (lower is better)
Translates to: ARVGAASDPGGKGRRCSTGHLLS*LDYFWG
Trigger: TCCCCAGAAATAGTCCAACCAAGAGAGTAGATGTCC...TGTTGAGCAACGCCGCCCCTTCCCTCCAGGATCAGAAGCAGCACCCACCCTTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103241.8
CDS-3UTR CCA 90 bp AGTGAGCAGGACCTCCCTTCGTTTCCGGCAAGTACACAGAAGCCTTGCTGTAGTGCACCCCAGGAGTGGTaGGGACATCTACTCTCTTGG +
Preference number: 4 (lower is better)
Translates to: SEQDLPSFPASTQKPCCSAPQEW*GHLLSW
Trigger: CCAAGAGAGTAGATGTCCCCACCACTCCTGGGGTGC...ACTACAGCAAGGCTTCTGTGTACTTGCCGGAAACGAAGGGAGGTCCTGCTCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CCA 90 bp GTACCCTCACAGCTTCCTCGCAACAGCAGGGACAGGATAAAGCCACACGGGAATTTGGCACCCCAGGAGTaGTGGGGACATCTACTCTCT +
Preference number: 4 (lower is better)
Translates to: VPSQLPRNSRDRIKPHGNLAPQE*WGHLLS
Trigger: AGAGAGTAGATGTCCCCACCACTCCTGGGGTGCCAA...ATTCCCGTGTGGCTTTATCCTGTCCCTGCTGTTGCGAGGAAGCTGTGAGGGTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CCA 90 bp GGAATGTTTATCATGGCAAGGGTGGGTGCTGCTTCTGATCCTGGAGGGAAGGGGTTCCAGAGAAGTCATTaGCACCCCAGGAGTGGTGGG +
Preference number: 4 (lower is better)
Translates to: GMFIMARVGAASDPGGKGFQRSH*HPRSGG
Trigger: CCCACCACTCCTGGGGTGCCAATGACTTCTCTGGAA...CCCCTTCCCTCCAGGATCAGAAGCAGCACCCACCCTTGCCATGATAAACATTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103241.8
CDS-3UTR CCA 90 bp GTACCCTCACAGCTTCCTCGCAACAGCAGGGACAGGATAAAGCCACACGGGAATTCTTTAGTCCCGTCCTaGGGAGGGTGCCATTACTGG +
Preference number: 4 (lower is better)
Translates to: VPSQLPRNSRDRIKPHGNSLVPS*GGCHYW
Trigger: CCAGTAATGGCACCCTCCCCAGGACGGGACTAAAGA...ATTCCCGTGTGGCTTTATCCTGTCCCTGCTGTTGCGAGGAAGCTGTGAGGGTAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR TCA 90 bp CCTTCTGCTTCAAACGAAAGAAATGGAGTGAGCAGGACCTCCCTTCGTTTCCGGCTCCAGGACCCGCTGTaGGCCACCCATGTCGTTTTT +
Preference number: 4 (lower is better)
Translates to: PSASNERNGVSRTSLRFRLQDPL*ATHVVF
Trigger: AAAAACGACATGGGTGGCTCACAGCGGGTCCTGGAG...CCGGAAACGAAGGGAGGTCCTGCTCACTCCATTTCTTTCGTTTGAAGCAGAAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR TCA 90 bp GCAAGGGTGGGTGCTGCTTCTGATCCTGGAGGGAAGGGGCGGCGTTGCTCAACACAGTGGGGATGCCATTaGTTTGGATTATGTCTGTTA +
Preference number: 4 (lower is better)
Translates to: ARVGAASDPGGKGRRCSTQWGCH*FGLCLL
Trigger: TAACAGACATAATCCAAATCAATGGCATCCCCACTG...TGTTGAGCAACGCCGCCCCTTCCCTCCAGGATCAGAAGCAGCACCCACCCTTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103241.8
CDS-3UTR TCA 90 bp GTGAGCAGGACCTCCCTTCGTTTCCGGCAAGTACACAGAAGCCTTGCTGTAGTATCTGCTGGTATTCCTTaGCGGGGCTGTCAAAGAGGC +
Preference number: 4 (lower is better)
Translates to: VSRTSLRFRQVHRSLAVVSAGIP*RGCQRG
Trigger: GCCTCTTTGACAGCCCCGTCAAGGAATACCAGCAGA...TACTACAGCAAGGCTTCTGTGTACTTGCCGGAAACGAAGGGAGGTCCTGCTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR TCA 90 bp AATGGAGTGAGCAGGACCTCCCTTCGTTTCCGGCAAGTACACAGAAGCCTTGCTTCTGCTGGTATTCCTTaGCGGGGCTGTCAAAGAGGC +
Preference number: 4 (lower is better)
Translates to: NGVSRTSLRFRQVHRSLASAGIP*RGCQRG
Trigger: GCCTCTTTGACAGCCCCGTCAAGGAATACCAGCAGA...AGCAAGGCTTCTGTGTACTTGCCGGAAACGAAGGGAGGTCCTGCTCACTCCATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR TCA 90 bp CTTCCCTGGCTACACATCCCTTCTGCTTCAAACGAAAGAAATGGAGTGAGCAGGGGGGTGTTCTTTCCTTaGAGCACCGTGGCTGTGGGC +
Preference number: 4 (lower is better)
Translates to: LPWLHIPSASNERNGVSRGVFFP*STVAVG
Trigger: GCCCACAGCCACGGTGCTTCAAGGAAAGAACACCCC...CCTGCTCACTCCATTTCTTTCGTTTGAAGCAGAAGGGATGTGTAGCCAGGGAAG
54% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR TCA 90 bp GGAATGTTTATCATGGCAAGGGTGGGTGCTGCTTCTGATCCTGGAGGGAAGGGGCTCCCGCTTACTGGATaGCTTCGTAAGAGGGTGATC +
Preference number: 4 (lower is better)
Translates to: GMFIMARVGAASDPGGKGLPLTG*LRKRVI
Trigger: GATCACCCTCTTACGAAGTCATCCAGTAAGCGGGAG...CCCCTTCCCTCCAGGATCAGAAGCAGCACCCACCCTTGCCATGATAAACATTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103241.8
CDS-3UTR TCA 90 bp GTACCCTCACAGCTTCCTCGCAACAGCAGGGACAGGATAAAGCCACACGGGAATCTCCCGCTTACTGGATaGCTTCGTAAGAGGGTGATC +
Preference number: 4 (lower is better)
Translates to: VPSQLPRNSRDRIKPHGNLPLTG*LRKRVI
Trigger: GATCACCCTCTTACGAAGTCATCCAGTAAGCGGGAG...ATTCCCGTGTGGCTTTATCCTGTCCCTGCTGTTGCGAGGAAGCTGTGAGGGTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR GCA 90 bp GTGAGCAGGACCTCCCTTCGTTTCCGGCAAGTACACAGAAGCCTTGCTGTAGTAAAGTCCAGCCTGTGCTaGGATTCGTTGCCTGAAGGG +
Preference number: 4 (lower is better)
Translates to: VSRTSLRFRQVHRSLAVVKSSLC*DSLPEG
Trigger: CCCTTCAGGCAACGAATCGCAGCACAGGCTGGACTT...TACTACAGCAAGGCTTCTGTGTACTTGCCGGAAACGAAGGGAGGTCCTGCTCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR GCA 90 bp ATCCTGGAGGGAAGGGGCGGCGTTGCTCAACAACAAATCGCTCTAGGTGGCTTTGGTCTTGTAAGCTTCTaGGAGGCCGTGTTTGGCACA +
Preference number: 4 (lower is better)
Translates to: ILEGRGGVAQQQIALGGFGLVSF*EAVFGT
Trigger: TGTGCCAAACACGGCCTCGCAGAAGCTTACAAGACC...AAAGCCACCTAGAGCGATTTGTTGTTGAGCAACGCCGCCCCTTCCCTCCAGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103241.8
CDS-3UTR GCA 90 bp CTTCCCTGGCTACACATCCCTTCTGCTTCAAACGAAAGAAATGGAGTGAGCAGGTCCACAGACCGCCGGTaGTCCCGCTTACTGGATGAC +
Preference number: 4 (lower is better)
Translates to: LPWLHIPSASNERNGVSRSTDRR*SRLLDD
Trigger: GTCATCCAGTAAGCGGGAGCACCGGCGGTCTGTGGA...CCTGCTCACTCCATTTCTTTCGTTTGAAGCAGAAGGGATGTGTAGCCAGGGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CCA 90 bp TCTGATCCTGGAGGGAAGGGGCGGCGTTGCTCAACAACAAATCGCTCTAGGTGGGCCAGGCCTTGGTTTTaGTACTTTGTCTTCGGGAAC +
Preference number: 4 (lower is better)
Translates to: SDPGGKGRRCSTTNRSRWARPWF*YFVFGN
Trigger: GTTCCCGAAGACAAAGTACCAAAACCAAGGCCTGGC...CCACCTAGAGCGATTTGTTGTTGAGCAACGCCGCCCCTTCCCTCCAGGATCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103241.8
CDS-3UTR CCA 90 bp GAAGGGAGCCTTCCCTGGCTACACATCCCTTCTGCTTCAAACGAAAGAAATGGAAGGGCTCATCGGCAATaGGTGGGACGGCAGAGTCCA +
Preference number: 4 (lower is better)
Translates to: EGSLPWLHIPSASNERNGRAHRQ*VGRQSP
Trigger: TGGACTCTGCCGTCCCACCCATTGCCGATGAGCCCT...TCCATTTCTTTCGTTTGAAGCAGAAGGGATGTGTAGCCAGGGAAGGCTCCCTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CCA 90 bp GTACCCTCACAGCTTCCTCGCAACAGCAGGGACAGGATAAAGCCACACGGGAATGAGTCTGTGCACGACTaGGCGGATTCTGCGTCTTTA +
Preference number: 4 (lower is better)
Translates to: VPSQLPRNSRDRIKPHGNESVHD*ADSASL
Trigger: TAAAGACGCAGAATCCGCCCAGTCGTGCACAGACTC...ATTCCCGTGTGGCTTTATCCTGTCCCTGCTGTTGCGAGGAAGCTGTGAGGGTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CCA 90 bp CTTCCCTGGCTACACATCCCTTCTGCTTCAAACGAAAGAAATGGAGTGAGCAGGTGGCGAAGCTTCCGCTaGAGTCTGTGCACGACTGGG +
Preference number: 4 (lower is better)
Translates to: LPWLHIPSASNERNGVSRWRSFR*SLCTTG
Trigger: CCCAGTCGTGCACAGACTCCAGCGGAAGCTTCGCCA...CCTGCTCACTCCATTTCTTTCGTTTGAAGCAGAAGGGATGTGTAGCCAGGGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CCA 90 bp GAAGGGAGCCTTCCCTGGCTACACATCCCTTCTGCTTCAAACGAAAGAAATGGATGGCGAAGCTTCCGCTaGAGTCTGTGCACGACTGGG +
Preference number: 4 (lower is better)
Translates to: EGSLPWLHIPSASNERNGWRSFR*SLCTTG
Trigger: CCCAGTCGTGCACAGACTCCAGCGGAAGCTTCGCCA...TCCATTTCTTTCGTTTGAAGCAGAAGGGATGTGTAGCCAGGGAAGGCTCCCTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CCA 90 bp GCAAGGGTGGGTGCTGCTTCTGATCCTGGAGGGAAGGGGCGGCGTTGCTCAACAGGTTGCTGTAGAGTTTaGGAGAATCAATGTTCTGCT +
Preference number: 4 (lower is better)
Translates to: ARVGAASDPGGKGRRCSTGCCRV*ENQCSA
Trigger: AGCAGAACATTGATTCTCCCAAACTCTACAGCAACC...TGTTGAGCAACGCCGCCCCTTCCCTCCAGGATCAGAAGCAGCACCCACCCTTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103241.8
CDS-3UTR CCA 90 bp AATGGAGTGAGCAGGACCTCCCTTCGTTTCCGGCAAGTACACAGAAGCCTTGCTTGCAGGGTCTTCTGGTaGAGGACAGGTGTGGATTCC +
Preference number: 4 (lower is better)
Translates to: NGVSRTSLRFRQVHRSLACRVFW*RTGVDS
Trigger: GGAATCCACACCTGTCCTCCACCAGAAGACCCTGCA...AGCAAGGCTTCTGTGTACTTGCCGGAAACGAAGGGAGGTCCTGCTCACTCCATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CCA 90 bp AGTACTGTATCAGCTCTTTACACTGGTGAAGGGAGCCTTCCCTGGCTACACATCGAAGCACCGTGGCTGTaGGCCTTCTCAGAGTGGCTC +
Preference number: 4 (lower is better)
Translates to: STVSALYTGEGSLPWLHIEAPWL*AFSEWL
Trigger: GAGCCACTCTGAGAAGGCCCACAGCCACGGTGCTTC...GATGTGTAGCCAGGGAAGGCTCCCTTCACCAGTGTAAAGAGCTGATACAGTACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CCA 90 bp CTTCCCTGGCTACACATCCCTTCTGCTTCAAACGAAAGAAATGGAGTGAGCAGGGAAGCACCGTGGCTGTaGGCCTTCTCAGAGTGGCTC +
Preference number: 4 (lower is better)
Translates to: LPWLHIPSASNERNGVSREAPWL*AFSEWL
Trigger: GAGCCACTCTGAGAAGGCCCACAGCCACGGTGCTTC...CCTGCTCACTCCATTTCTTTCGTTTGAAGCAGAAGGGATGTGTAGCCAGGGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CCA 90 bp GAAGGGAGCCTTCCCTGGCTACACATCCCTTCTGCTTCAAACGAAAGAAATGGAGAAGCACCGTGGCTGTaGGCCTTCTCAGAGTGGCTC +
Preference number: 4 (lower is better)
Translates to: EGSLPWLHIPSASNERNGEAPWL*AFSEWL
Trigger: GAGCCACTCTGAGAAGGCCCACAGCCACGGTGCTTC...TCCATTTCTTTCGTTTGAAGCAGAAGGGATGTGTAGCCAGGGAAGGCTCCCTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CCA 90 bp GTGAGCAGGACCTCCCTTCGTTTCCGGCAAGTACACAGAAGCCTTGCTGTAGTATTCCTTGAAGCACCGTaGCTGTGGGCCTTCTCAGAG +
Preference number: 4 (lower is better)
Translates to: VSRTSLRFRQVHRSLAVVFLEAP*LWAFSE
Trigger: CTCTGAGAAGGCCCACAGCCACGGTGCTTCAAGGAA...TACTACAGCAAGGCTTCTGTGTACTTGCCGGAAACGAAGGGAGGTCCTGCTCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CCA 90 bp AGTGAGCAGGACCTCCCTTCGTTTCCGGCAAGTACACAGAAGCCTTGCTGTAGTTTCCTTGAAGCACCGTaGCTGTGGGCCTTCTCAGAG +
Preference number: 4 (lower is better)
Translates to: SEQDLPSFPASTQKPCCSFLEAP*LWAFSE
Trigger: CTCTGAGAAGGCCCACAGCCACGGTGCTTCAAGGAA...ACTACAGCAAGGCTTCTGTGTACTTGCCGGAAACGAAGGGAGGTCCTGCTCACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CCA 90 bp ATCCTGGAGGGAAGGGGCGGCGTTGCTCAACAACAAATCGCTCTAGGTGGCTTTGAAGAACGATGGCACTaGGGATATGCCCGTGACTCA +
Preference number: 4 (lower is better)
Translates to: ILEGRGGVAQQQIALGGFEERWH*GYARDS
Trigger: TGAGTCACGGGCATATCCCCAGTGCCATCGTTCTTC...AAAGCCACCTAGAGCGATTTGTTGTTGAGCAACGCCGCCCCTTCCCTCCAGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103241.8
CDS-3UTR CCA 90 bp GCAAGGGTGGGTGCTGCTTCTGATCCTGGAGGGAAGGGGCGGCGTTGCTCAACAATCTACTCTCTTGGTTaGACTATTTCTGGGGAGTGT +
Preference number: 4 (lower is better)
Translates to: ARVGAASDPGGKGRRCSTIYSLG*TISGEC
Trigger: ACACTCCCCAGAAATAGTCCAACCAAGAGAGTAGAT...TGTTGAGCAACGCCGCCCCTTCCCTCCAGGATCAGAAGCAGCACCCACCCTTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103241.8
CDS-3UTR CCA 90 bp GTGAGCAGGACCTCCCTTCGTTTCCGGCAAGTACACAGAAGCCTTGCTGTAGTATTGGCACCCCAGGAGTaGTGGGGACATCTACTCTCT +
Preference number: 4 (lower is better)
Translates to: VSRTSLRFRQVHRSLAVVLAPQE*WGHLLS
Trigger: AGAGAGTAGATGTCCCCACCACTCCTGGGGTGCCAA...TACTACAGCAAGGCTTCTGTGTACTTGCCGGAAACGAAGGGAGGTCCTGCTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CCA 90 bp AATGGAGTGAGCAGGACCTCCCTTCGTTTCCGGCAAGTACACAGAAGCCTTGCTTTCCAGAGAAGTCATTaGCACCCCAGGAGTGGTGGG +
Preference number: 4 (lower is better)
Translates to: NGVSRTSLRFRQVHRSLAFQRSH*HPRSGG
Trigger: CCCACCACTCCTGGGGTGCCAATGACTTCTCTGGAA...AGCAAGGCTTCTGTGTACTTGCCGGAAACGAAGGGAGGTCCTGCTCACTCCATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CCA 90 bp GTACCCTCACAGCTTCCTCGCAACAGCAGGGACAGGATAAAGCCACACGGGAATGGAGGGTGCCATTACTaGTATAGCTGCTCTGTCTGG +
Preference number: 4 (lower is better)
Translates to: VPSQLPRNSRDRIKPHGNGGCHY*YSCSVW
Trigger: CCAGACAGAGCAGCTATACCAGTAATGGCACCCTCC...ATTCCCGTGTGGCTTTATCCTGTCCCTGCTGTTGCGAGGAAGCTGTGAGGGTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CCA 90 bp ATCCTGGAGGGAAGGGGCGGCGTTGCTCAACAACAAATCGCTCTAGGTGGCTTTGGAGGGTGCCATTACTaGTATAGCTGCTCTGTCTGG +
Preference number: 4 (lower is better)
Translates to: ILEGRGGVAQQQIALGGFGGCHY*YSCSVW
Trigger: CCAGACAGAGCAGCTATACCAGTAATGGCACCCTCC...AAAGCCACCTAGAGCGATTTGTTGTTGAGCAACGCCGCCCCTTCCCTCCAGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103241.8
CDS-3UTR CCA 90 bp GTGAGCAGGACCTCCCTTCGTTTCCGGCAAGTACACAGAAGCCTTGCTGTAGTATCTTTAGTCCCGTCCTaGGGAGGGTGCCATTACTGG +
Preference number: 4 (lower is better)
Translates to: VSRTSLRFRQVHRSLAVVSLVPS*GGCHYW
Trigger: CCAGTAATGGCACCCTCCCCAGGACGGGACTAAAGA...TACTACAGCAAGGCTTCTGTGTACTTGCCGGAAACGAAGGGAGGTCCTGCTCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR TCA 90 bp GTGAGCAGGACCTCCCTTCGTTTCCGGCAAGTACACAGAAGCCTTGCTGTAGTACTGCGATTCGTTGCCTaGAGGGCGTCCTCTAAAAAC +
Preference number: 4 (lower is better)
Translates to: VSRTSLRFRQVHRSLAVVLRFVA*RASSKN
Trigger: GTTTTTAGAGGACGCCCTTCAGGCAACGAATCGCAG...TACTACAGCAAGGCTTCTGTGTACTTGCCGGAAACGAAGGGAGGTCCTGCTCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR TCA 90 bp TCTGATCCTGGAGGGAAGGGGCGGCGTTGCTCAACAACAAATCGCTCTAGGTGGATCTGCACATCGGGTTaGAAGCATTGGTACCACAGA +
Preference number: 4 (lower is better)
Translates to: SDPGGKGRRCSTTNRSRWICTSG*KHWYHR
Trigger: TCTGTGGTACCAATGCTTTCAACCCGATGTGCAGAT...CCACCTAGAGCGATTTGTTGTTGAGCAACGCCGCCCCTTCCCTCCAGGATCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103241.8
CDS-3UTR TCA 90 bp CTGGCTACACATCCCTTCTGCTTCAAACGAAAGAAATGGAGTGAGCAGGACCTCCTCCAGGACCCGCTGTaGGCCACCCATGTCGTTTTT +
Preference number: 4 (lower is better)
Translates to: LATHPFCFKRKKWSEQDLLQDPL*ATHVVF
Trigger: AAAAACGACATGGGTGGCTCACAGCGGGTCCTGGAG...GAGGTCCTGCTCACTCCATTTCTTTCGTTTGAAGCAGAAGGGATGTGTAGCCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR TCA 90 bp AATGGAGTGAGCAGGACCTCCCTTCGTTTCCGGCAAGTACACAGAAGCCTTGCTCTCCCGCTTACTGGATaGCTTCGTAAGAGGGTGATC +
Preference number: 4 (lower is better)
Translates to: NGVSRTSLRFRQVHRSLALPLTG*LRKRVI
Trigger: GATCACCCTCTTACGAAGTCATCCAGTAAGCGGGAG...AGCAAGGCTTCTGTGTACTTGCCGGAAACGAAGGGAGGTCCTGCTCACTCCATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR TCA 90 bp AGTGAGCAGGACCTCCCTTCGTTTCCGGCAAGTACACAGAAGCCTTGCTGTAGTCTCCCGCTTACTGGATaGCTTCGTAAGAGGGTGATC +
Preference number: 4 (lower is better)
Translates to: SEQDLPSFPASTQKPCCSLPLTG*LRKRVI
Trigger: GATCACCCTCTTACGAAGTCATCCAGTAAGCGGGAG...ACTACAGCAAGGCTTCTGTGTACTTGCCGGAAACGAAGGGAGGTCCTGCTCACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR TCA 90 bp GTGAGCAGGACCTCCCTTCGTTTCCGGCAAGTACACAGAAGCCTTGCTGTAGTACTCCCGCTTACTGGATaGCTTCGTAAGAGGGTGATC +
Preference number: 4 (lower is better)
Translates to: VSRTSLRFRQVHRSLAVVLPLTG*LRKRVI
Trigger: GATCACCCTCTTACGAAGTCATCCAGTAAGCGGGAG...TACTACAGCAAGGCTTCTGTGTACTTGCCGGAAACGAAGGGAGGTCCTGCTCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR TCA 90 bp TCTGATCCTGGAGGGAAGGGGCGGCGTTGCTCAACAACAAATCGCTCTAGGTGGACTTGTTCAGTGGTCTaGCAGATGTGGTTTGCGGAA +
Preference number: 4 (lower is better)
Translates to: SDPGGKGRRCSTTNRSRWTCSVV*QMWFAE
Trigger: TTCCGCAAACCACATCTGTCAGACCACTGAACAAGT...CCACCTAGAGCGATTTGTTGTTGAGCAACGCCGCCCCTTCCCTCCAGGATCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103241.8
CDS-3UTR GCA 90 bp GTACCCTCACAGCTTCCTCGCAACAGCAGGGACAGGATAAAGCCACACGGGAATGAGTCTGGGGTTTTCTaGTCTTTGAACCGCCCTTTG +
Preference number: 4 (lower is better)
Translates to: VPSQLPRNSRDRIKPHGNESGVF*SLNRPL
Trigger: CAAAGGGCGGTTCAAAGAGCAGAAAACCCCAGACTC...ATTCCCGTGTGGCTTTATCCTGTCCCTGCTGTTGCGAGGAAGCTGTGAGGGTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR GCA 90 bp GGAATGTTTATCATGGCAAGGGTGGGTGCTGCTTCTGATCCTGGAGGGAAGGGGGAGTCTGGGGTTTTCTaGTCTTTGAACCGCCCTTTG +
Preference number: 4 (lower is better)
Translates to: GMFIMARVGAASDPGGKGESGVF*SLNRPL
Trigger: CAAAGGGCGGTTCAAAGAGCAGAAAACCCCAGACTC...CCCCTTCCCTCCAGGATCAGAAGCAGCACCCACCCTTGCCATGATAAACATTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103241.8
CDS-3UTR GCA 90 bp AATGGAGTGAGCAGGACCTCCCTTCGTTTCCGGCAAGTACACAGAAGCCTTGCTGGTCTTGTAAGCTTCTaGGAGGCCGTGTTTGGCACA +
Preference number: 4 (lower is better)
Translates to: NGVSRTSLRFRQVHRSLAGLVSF*EAVFGT
Trigger: TGTGCCAAACACGGCCTCGCAGAAGCTTACAAGACC...AGCAAGGCTTCTGTGTACTTGCCGGAAACGAAGGGAGGTCCTGCTCACTCCATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR GCA 90 bp CTGGCTACACATCCCTTCTGCTTCAAACGAAAGAAATGGAGTGAGCAGGACCTCCCGTACTCCGTGTCCTaGTCATATCCTCCAGGGCTG +
Preference number: 4 (lower is better)
Translates to: LATHPFCFKRKKWSEQDLPYSVS*SYPPGL
Trigger: CAGCCCTGGAGGATATGAGCAGGACACGGAGTACGG...GAGGTCCTGCTCACTCCATTTCTTTCGTTTGAAGCAGAAGGGATGTGTAGCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000051419.15
ENSMUST00000078621.12
CDS-3UTR GCA 90 bp AGTACTGTATCAGCTCTTTACACTGGTGAAGGGAGCCTTCCCTGGCTACACATCTTCCGCTGGAGTCTGTaGACGACTGGGCGGATTCTG +
Preference number: 4 (lower is better)
Translates to: STVSALYTGEGSLPWLHIFRWSL*TTGRIL
Trigger: CAGAATCCGCCCAGTCGTGCACAGACTCCAGCGGAA...GATGTGTAGCCAGGGAAGGCTCCCTTCACCAGTGTAAAGAGCTGATACAGTACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR GCA 90 bp CTTCCCTGGCTACACATCCCTTCTGCTTCAAACGAAAGAAATGGAGTGAGCAGGTGGCTCTTCATGGCCTaGAGGGTCTTCTGGTGGAGG +
Preference number: 4 (lower is better)
Translates to: LPWLHIPSASNERNGVSRWLFMA*RVFWWR
Trigger: CCTCCACCAGAAGACCCTGCAGGCCATGAAGAGCCA...CCTGCTCACTCCATTTCTTTCGTTTGAAGCAGAAGGGATGTGTAGCCAGGGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CCA 90 bp GCAAGGGTGGGTGCTGCTTCTGATCCTGGAGGGAAGGGGCGGCGTTGCTCAACAGGTATCACCTCTGTTTaGGGGATTTCATTTAAGTTC +
Preference number: 4 (lower is better)
Translates to: ARVGAASDPGGKGRRCSTGITSV*GISFKF
Trigger: GAACTTAAATGAAATCCCCCAAACAGAGGTGATACC...TGTTGAGCAACGCCGCCCCTTCCCTCCAGGATCAGAAGCAGCACCCACCCTTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103241.8
CDS-3UTR CCA 90 bp GGAATGTTTATCATGGCAAGGGTGGGTGCTGCTTCTGATCCTGGAGGGAAGGGGGCCAGGCCTTGGTTTTaGTACTTTGTCTTCGGGAAC +
Preference number: 4 (lower is better)
Translates to: GMFIMARVGAASDPGGKGARPWF*YFVFGN
Trigger: GTTCCCGAAGACAAAGTACCAAAACCAAGGCCTGGC...CCCCTTCCCTCCAGGATCAGAAGCAGCACCCACCCTTGCCATGATAAACATTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103241.8
CDS-3UTR CCA 90 bp GTACCCTCACAGCTTCCTCGCAACAGCAGGGACAGGATAAAGCCACACGGGAATGCCAGGCCTTGGTTTTaGTACTTTGTCTTCGGGAAC +
Preference number: 4 (lower is better)
Translates to: VPSQLPRNSRDRIKPHGNARPWF*YFVFGN
Trigger: GTTCCCGAAGACAAAGTACCAAAACCAAGGCCTGGC...ATTCCCGTGTGGCTTTATCCTGTCCCTGCTGTTGCGAGGAAGCTGTGAGGGTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CCA 90 bp AATGGAGTGAGCAGGACCTCCCTTCGTTTCCGGCAAGTACACAGAAGCCTTGCTGAGTCTGTGCACGACTaGGCGGATTCTGCGTCTTTA +
Preference number: 4 (lower is better)
Translates to: NGVSRTSLRFRQVHRSLAESVHD*ADSASL
Trigger: TAAAGACGCAGAATCCGCCCAGTCGTGCACAGACTC...AGCAAGGCTTCTGTGTACTTGCCGGAAACGAAGGGAGGTCCTGCTCACTCCATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CCA 90 bp AGTGAGCAGGACCTCCCTTCGTTTCCGGCAAGTACACAGAAGCCTTGCTGTAGTGAGTCTGTGCACGACTaGGCGGATTCTGCGTCTTTA +
Preference number: 4 (lower is better)
Translates to: SEQDLPSFPASTQKPCCSESVHD*ADSASL
Trigger: TAAAGACGCAGAATCCGCCCAGTCGTGCACAGACTC...ACTACAGCAAGGCTTCTGTGTACTTGCCGGAAACGAAGGGAGGTCCTGCTCACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CCA 90 bp GTGAGCAGGACCTCCCTTCGTTTCCGGCAAGTACACAGAAGCCTTGCTGTAGTAGCAGTTCCTTCCGACTaGTCAGCAGGTTGCTGTAGA +
Preference number: 4 (lower is better)
Translates to: VSRTSLRFRQVHRSLAVVAVPSD*SAGCCR
Trigger: TCTACAGCAACCTGCTGACCAGTCGGAAGGAACTGC...TACTACAGCAAGGCTTCTGTGTACTTGCCGGAAACGAAGGGAGGTCCTGCTCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CCA 90 bp AATGGAGTGAGCAGGACCTCCCTTCGTTTCCGGCAAGTACACAGAAGCCTTGCTGCAGTTCCTTCCGACTaGTCAGCAGGTTGCTGTAGA +
Preference number: 4 (lower is better)
Translates to: NGVSRTSLRFRQVHRSLAAVPSD*SAGCCR
Trigger: TCTACAGCAACCTGCTGACCAGTCGGAAGGAACTGC...AGCAAGGCTTCTGTGTACTTGCCGGAAACGAAGGGAGGTCCTGCTCACTCCATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CCA 90 bp CCCCCAAGTAATGCAGACCATGGTCACTGTCCCAAGATATCACTTGAACTCCGCTGCAGGGTCTTCTGGTaGAGGACAGGTGTGGATTCC +
Preference number: 4 (lower is better)
Translates to: PPSNADHGHCPKISLELRCRVFW*RTGVDS
Trigger: GGAATCCACACCTGTCCTCCACCAGAAGACCCTGCA...GCGGAGTTCAAGTGATATCTTGGGACAGTGACCATGGTCTGCATTACTTGGGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103241.8
CDS-3UTR CCA 90 bp CTTCCCTGGCTACACATCCCTTCTGCTTCAAACGAAAGAAATGGAGTGAGCAGGGCCTGCAGGGTCTTCTaGTGGAGGACAGGTGTGGAT +
Preference number: 4 (lower is better)
Translates to: LPWLHIPSASNERNGVSRACRVF*WRTGVD
Trigger: ATCCACACCTGTCCTCCACCAGAAGACCCTGCAGGC...CCTGCTCACTCCATTTCTTTCGTTTGAAGCAGAAGGGATGTGTAGCCAGGGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CCA 90 bp CCTTCTGCTTCAAACGAAAGAAATGGAGTGAGCAGGACCTCCCTTCGTTTCCGGCAGAGTGGCTCTTCATaGCCTGCAGGGTCTTCTGGT +
Preference number: 4 (lower is better)
Translates to: PSASNERNGVSRTSLRFRQSGSS*PAGSSG
Trigger: ACCAGAAGACCCTGCAGGCCATGAAGAGCCACTCTG...CCGGAAACGAAGGGAGGTCCTGCTCACTCCATTTCTTTCGTTTGAAGCAGAAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CCA 90 bp CTGGCTACACATCCCTTCTGCTTCAAACGAAAGAAATGGAGTGAGCAGGACCTCTGGGCCTTCTCAGAGTaGCTCTTCATGGCCTGCAGG +
Preference number: 4 (lower is better)
Translates to: LATHPFCFKRKKWSEQDLWAFSE*LFMACR
Trigger: CCTGCAGGCCATGAAGAGCCACTCTGAGAAGGCCCA...GAGGTCCTGCTCACTCCATTTCTTTCGTTTGAAGCAGAAGGGATGTGTAGCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CCA 90 bp CTTCCCTGGCTACACATCCCTTCTGCTTCAAACGAAAGAAATGGAGTGAGCAGGTGGGCCTTCTCAGAGTaGCTCTTCATGGCCTGCAGG +
Preference number: 4 (lower is better)
Translates to: LPWLHIPSASNERNGVSRWAFSE*LFMACR
Trigger: CCTGCAGGCCATGAAGAGCCACTCTGAGAAGGCCCA...CCTGCTCACTCCATTTCTTTCGTTTGAAGCAGAAGGGATGTGTAGCCAGGGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CCA 90 bp CCCCCAAGTAATGCAGACCATGGTCACTGTCCCAAGATATCACTTGAACTCCGCATGCCCGTGACTCAATaGGGAATGGGGTGGAGGACT +
Preference number: 4 (lower is better)
Translates to: PPSNADHGHCPKISLELRMPVTQ*GMGWRT
Trigger: AGTCCTCCACCCCATTCCCCATTGAGTCACGGGCAT...GCGGAGTTCAAGTGATATCTTGGGACAGTGACCATGGTCTGCATTACTTGGGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103241.8
CDS-3UTR CCA 90 bp AATGGAGTGAGCAGGACCTCCCTTCGTTTCCGGCAAGTACACAGAAGCCTTGCTGAAGAACGATGGCACTaGGGATATGCCCGTGACTCA +
Preference number: 4 (lower is better)
Translates to: NGVSRTSLRFRQVHRSLAEERWH*GYARDS
Trigger: TGAGTCACGGGCATATCCCCAGTGCCATCGTTCTTC...AGCAAGGCTTCTGTGTACTTGCCGGAAACGAAGGGAGGTCCTGCTCACTCCATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CCA 90 bp AATGGAGTGAGCAGGACCTCCCTTCGTTTCCGGCAAGTACACAGAAGCCTTGCTCGTTTGGAAGAACGATaGCACTGGGGATATGCCCGT +
Preference number: 4 (lower is better)
Translates to: NGVSRTSLRFRQVHRSLARLEER*HWGYAR
Trigger: ACGGGCATATCCCCAGTGCCATCGTTCTTCCAAACG...AGCAAGGCTTCTGTGTACTTGCCGGAAACGAAGGGAGGTCCTGCTCACTCCATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CCA 90 bp GTACCCTCACAGCTTCCTCGCAACAGCAGGGACAGGATAAAGCCACACGGGAATGGATCTCTCCCAGGATaGCTTTGGGGTTACTGTTTG +
Preference number: 4 (lower is better)
Translates to: VPSQLPRNSRDRIKPHGNGSLPG*LWGYCL
Trigger: CAAACAGTAACCCCAAAGCCATCCTGGGAGAGATCC...ATTCCCGTGTGGCTTTATCCTGTCCCTGCTGTTGCGAGGAAGCTGTGAGGGTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CCA 90 bp GAAGGGAGCCTTCCCTGGCTACACATCCCTTCTGCTTCAAACGAAAGAAATGGAGCACCCCAGGAGTGGTaGGGACATCTACTCTCTTGG +
Preference number: 4 (lower is better)
Translates to: EGSLPWLHIPSASNERNGAPQEW*GHLLSW
Trigger: CCAAGAGAGTAGATGTCCCCACCACTCCTGGGGTGC...TCCATTTCTTTCGTTTGAAGCAGAAGGGATGTGTAGCCAGGGAAGGCTCCCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CCA 90 bp CTTCCCTGGCTACACATCCCTTCTGCTTCAAACGAAAGAAATGGAGTGAGCAGGGCACCCCAGGAGTGGTaGGGACATCTACTCTCTTGG +
Preference number: 4 (lower is better)
Translates to: LPWLHIPSASNERNGVSRAPQEW*GHLLSW
Trigger: CCAAGAGAGTAGATGTCCCCACCACTCCTGGGGTGC...CCTGCTCACTCCATTTCTTTCGTTTGAAGCAGAAGGGATGTGTAGCCAGGGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CCA 90 bp CTGGCTACACATCCCTTCTGCTTCAAACGAAAGAAATGGAGTGAGCAGGACCTCGCACCCCAGGAGTGGTaGGGACATCTACTCTCTTGG +
Preference number: 4 (lower is better)
Translates to: LATHPFCFKRKKWSEQDLAPQEW*GHLLSW
Trigger: CCAAGAGAGTAGATGTCCCCACCACTCCTGGGGTGC...GAGGTCCTGCTCACTCCATTTCTTTCGTTTGAAGCAGAAGGGATGTGTAGCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CCA 90 bp CCCCCAAGTAATGCAGACCATGGTCACTGTCCCAAGATATCACTTGAACTCCGCTTGGCACCCCAGGAGTaGTGGGGACATCTACTCTCT +
Preference number: 4 (lower is better)
Translates to: PPSNADHGHCPKISLELRLAPQE*WGHLLS
Trigger: AGAGAGTAGATGTCCCCACCACTCCTGGGGTGCCAA...GCGGAGTTCAAGTGATATCTTGGGACAGTGACCATGGTCTGCATTACTTGGGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103241.8
CDS-3UTR CCA 90 bp CCTTCTGCTTCAAACGAAAGAAATGGAGTGAGCAGGACCTCCCTTCGTTTCCGGTTCCAGAGAAGTCATTaGCACCCCAGGAGTGGTGGG +
Preference number: 4 (lower is better)
Translates to: PSASNERNGVSRTSLRFRFQRSH*HPRSGG
Trigger: CCCACCACTCCTGGGGTGCCAATGACTTCTCTGGAA...CCGGAAACGAAGGGAGGTCCTGCTCACTCCATTTCTTTCGTTTGAAGCAGAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CCA 90 bp CCCCCAAGTAATGCAGACCATGGTCACTGTCCCAAGATATCACTTGAACTCCGCTTCCAGAGAAGTCATTaGCACCCCAGGAGTGGTGGG +
Preference number: 4 (lower is better)
Translates to: PPSNADHGHCPKISLELRFQRSH*HPRSGG
Trigger: CCCACCACTCCTGGGGTGCCAATGACTTCTCTGGAA...GCGGAGTTCAAGTGATATCTTGGGACAGTGACCATGGTCTGCATTACTTGGGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103241.8
CDS-3UTR CCA 90 bp CATCCCTTCTGCTTCAAACGAAAGAAATGGAGTGAGCAGGACCTCCCTTCGTTTCACCTTCGCCCCTGTTaGGGTGGGCATATAGCCTCC +
Preference number: 4 (lower is better)
Translates to: HPFCFKRKKWSEQDLPSFHLRPC*GGHIAS
Trigger: GGAGGCTATATGCCCACCCCAACAGGGGCGAAGGTG...AAACGAAGGGAGGTCCTGCTCACTCCATTTCTTTCGTTTGAAGCAGAAGGGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CCA 90 bp GTACCCTCACAGCTTCCTCGCAACAGCAGGGACAGGATAAAGCCACACGGGAATTTGGATTCTCCAGACTaGACTTCCCACCGTACACCA +
Preference number: 4 (lower is better)
Translates to: VPSQLPRNSRDRIKPHGNLDSPD*TSHRTP
Trigger: TGGTGTACGGTGGGAAGTCCAGTCTGGAGAATCCAA...ATTCCCGTGTGGCTTTATCCTGTCCCTGCTGTTGCGAGGAAGCTGTGAGGGTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000078621.12
CDS-3UTR CCA 90 bp GCAAGGGTGGGTGCTGCTTCTGATCCTGGAGGGAAGGGGCGGCGTTGCTCAACATTTAGATGTAATTTCTaGGCTACTTGCCACAGTGGT +
Preference number: 4 (lower is better)
Translates to: ARVGAASDPGGKGRRCSTFRCNF*ATCHSG
Trigger: ACCACTGTGGCAAGTAGCCCAGAAATTACATCTAAA...TGTTGAGCAACGCCGCCCCTTCCCTCCAGGATCAGAAGCAGCACCCACCCTTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000077847.12
ENSMUST00000103239.10
CDS-3UTR CCA 90 bp AGTGAGCAGGACCTCCCTTCGTTTCCGGCAAGTACACAGAAGCCTTGCTGTAGTTTGGATTCTCCAGACTaGACTTCCCACCGTACACCC +
Preference number: 4 (lower is better)
Translates to: SEQDLPSFPASTQKPCCSLDSPD*TSHRTP
Trigger: GGGTGTACGGTGGGAAGTCCAGTCTGGAGAATCCAA...ACTACAGCAAGGCTTCTGTGTACTTGCCGGAAACGAAGGGAGGTCCTGCTCACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000077847.12
ENSMUST00000103239.10
CDS-3UTR TCA 90 bp AGTGAGCAGGACCTCCCTTCGTTTCCGGCAAGTACACAGAAGCCTTGCTGTAGTCCATGCTTCTGTAAATaGCAGCATCACTGGCCAGGA +
Preference number: 4 (lower is better)
Translates to: SEQDLPSFPASTQKPCCSPCFCK*QHHWPG
Trigger: TCCTGGCCAGTGATGCTGTCATTTACAGAAGCATGG...ACTACAGCAAGGCTTCTGTGTACTTGCCGGAAACGAAGGGAGGTCCTGCTCACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR TCA 90 bp CATCCCTTCTGCTTCAAACGAAAGAAATGGAGTGAGCAGGACCTCCCTTCGTTTCTCCAGGACCCGCTGTaGGCCACCCATGTCGTTTTT +
Preference number: 4 (lower is better)
Translates to: HPFCFKRKKWSEQDLPSFLQDPL*ATHVVF
Trigger: AAAAACGACATGGGTGGCTCACAGCGGGTCCTGGAG...AAACGAAGGGAGGTCCTGCTCACTCCATTTCTTTCGTTTGAAGCAGAAGGGATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR TCA 90 bp AGTACTGTATCAGCTCTTTACACTGGTGAAGGGAGCCTTCCCTGGCTACACATCTCTGCTGGTATTCCTTaGCGGGGCTGTCAAAGAGGC +
Preference number: 4 (lower is better)
Translates to: STVSALYTGEGSLPWLHISAGIP*RGCQRG
Trigger: GCCTCTTTGACAGCCCCGTCAAGGAATACCAGCAGA...GATGTGTAGCCAGGGAAGGCTCCCTTCACCAGTGTAAAGAGCTGATACAGTACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR TCA 90 bp GTACACAGAAGCCTTGCTGTAGTAGCTACATGTGGCAAGTTCTGGTGTTACCAAGGGGTGTTCTTTCCTTaGAGCACCGTGGCTGTGGGC +
Preference number: 4 (lower is better)
Translates to: VHRSLAVVATCGKFWCYQGVFFP*STVAVG
Trigger: GCCCACAGCCACGGTGCTTCAAGGAAAGAACACCCC...TTGGTAACACCAGAACTTGCCACATGTAGCTACTACAGCAAGGCTTCTGTGTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR GCA 90 bp AGTGAGCAGGACCTCCCTTCGTTTCCGGCAAGTACACAGAAGCCTTGCTGTAGTCAATTTTCTCGATCCTaGTGTCTGGACCTCCACGTC +
Preference number: 4 (lower is better)
Translates to: SEQDLPSFPASTQKPCCSQFSRS*CLDLHV
Trigger: GACGTGGAGGTCCAGACAGCAGGATCGAGAAAATTG...ACTACAGCAAGGCTTCTGTGTACTTGCCGGAAACGAAGGGAGGTCCTGCTCACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR GCA 90 bp GGAATGTTTATCATGGCAAGGGTGGGTGCTGCTTCTGATCCTGGAGGGAAGGGGTTTGTCTTCGGGAACTaGTGTCCAAACAGAGTCTGG +
Preference number: 4 (lower is better)
Translates to: GMFIMARVGAASDPGGKGFVFGN*CPNRVW
Trigger: CCAGACTCTGTTTGGACAGCAGTTCCCGAAGACAAA...CCCCTTCCCTCCAGGATCAGAAGCAGCACCCACCCTTGCCATGATAAACATTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103241.8
CDS-3UTR GCA 90 bp GTACCCTCACAGCTTCCTCGCAACAGCAGGGACAGGATAAAGCCACACGGGAATGGAGAATCAATGTTCTaGTGGTATTCCTTGACGGGG +
Preference number: 4 (lower is better)
Translates to: VPSQLPRNSRDRIKPHGNGESMF*WYSLTG
Trigger: CCCCGTCAAGGAATACCAGCAGAACATTGATTCTCC...ATTCCCGTGTGGCTTTATCCTGTCCCTGCTGTTGCGAGGAAGCTGTGAGGGTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR GCA 90 bp GGAATGTTTATCATGGCAAGGGTGGGTGCTGCTTCTGATCCTGGAGGGAAGGGGGGAGAATCAATGTTCTaGTGGTATTCCTTGACGGGG +
Preference number: 4 (lower is better)
Translates to: GMFIMARVGAASDPGGKGGESMF*WYSLTG
Trigger: CCCCGTCAAGGAATACCAGCAGAACATTGATTCTCC...CCCCTTCCCTCCAGGATCAGAAGCAGCACCCACCCTTGCCATGATAAACATTCC
52% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 5 transcripts:
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103241.8
CDS-3UTR GCA 90 bp ATCCTGGAGGGAAGGGGCGGCGTTGCTCAACAACAAATCGCTCTAGGTGGCTTTGACTGGTCAGCAGGTTaGTGTAGAGTTTGGGAGAAT +
Preference number: 4 (lower is better)
Translates to: ILEGRGGVAQQQIALGGFDWSAG*CRVWEN
Trigger: ATTCTCCCAAACTCTACAGCAACCTGCTGACCAGTC...AAAGCCACCTAGAGCGATTTGTTGTTGAGCAACGCCGCCCCTTCCCTCCAGGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103241.8
CDS-3UTR GCA 90 bp TCTGATCCTGGAGGGAAGGGGCGGCGTTGCTCAACAACAAATCGCTCTAGGTGGCTGACAGATGTGGTTTaGGGAACAAAGGAAGGCTTT +
Preference number: 4 (lower is better)
Translates to: SDPGGKGRRCSTTNRSRWLTDVV*GTKEGF
Trigger: AAAGCCTTCCTTTGTTCCGCAAACCACATCTGTCAG...CCACCTAGAGCGATTTGTTGTTGAGCAACGCCGCCCCTTCCCTCCAGGATCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103241.8
CDS-3UTR CCA 90 bp CCTTCTGCTTCAAACGAAAGAAATGGAGTGAGCAGGACCTCCCTTCGTTTCCGGTTGGATTCTCCAGACTaGACTTCCCACCGTACACCG +
Preference number: 4 (lower is better)
Translates to: PSASNERNGVSRTSLRFRLDSPD*TSHRTP
Trigger: CGGTGTACGGTGGGAAGTCCAGTCTGGAGAATCCAA...CCGGAAACGAAGGGAGGTCCTGCTCACTCCATTTCTTTCGTTTGAAGCAGAAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000103241.8
CDS-3UTR CCA 90 bp GGAATGTTTATCATGGCAAGGGTGGGTGCTGCTTCTGATCCTGGAGGGAAGGGGGAATCAATGTTCTGCTaGTATTCCTTGACGGGGCTG +
Preference number: 4 (lower is better)
Translates to: GMFIMARVGAASDPGGKGESMFC*YSLTGL
Trigger: CAGCCCCGTCAAGGAATACCAGCAGAACATTGATTC...CCCCTTCCCTCCAGGATCAGAAGCAGCACCCACCCTTGCCATGATAAACATTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103241.8
CDS-3UTR CCA 90 bp GAAGGGAGCCTTCCCTGGCTACACATCCCTTCTGCTTCAAACGAAAGAAATGGATGCAGGGTCTTCTGGTaGAGGACAGGTGTGGATTCC +
Preference number: 4 (lower is better)
Translates to: EGSLPWLHIPSASNERNGCRVFW*RTGVDS
Trigger: GGAATCCACACCTGTCCTCCACCAGAAGACCCTGCA...TCCATTTCTTTCGTTTGAAGCAGAAGGGATGTGTAGCCAGGGAAGGCTCCCTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CCA 90 bp CTTCCCTGGCTACACATCCCTTCTGCTTCAAACGAAAGAAATGGAGTGAGCAGGTGCAGGGTCTTCTGGTaGAGGACAGGTGTGGATTCC +
Preference number: 4 (lower is better)
Translates to: LPWLHIPSASNERNGVSRCRVFW*RTGVDS
Trigger: GGAATCCACACCTGTCCTCCACCAGAAGACCCTGCA...CCTGCTCACTCCATTTCTTTCGTTTGAAGCAGAAGGGATGTGTAGCCAGGGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CCA 90 bp AGTACTGTATCAGCTCTTTACACTGGTGAAGGGAGCCTTCCCTGGCTACACATCCAGAGTGGCTCTTCATaGCCTGCAGGGTCTTCTGGT +
Preference number: 4 (lower is better)
Translates to: STVSALYTGEGSLPWLHIQSGSS*PAGSSG
Trigger: ACCAGAAGACCCTGCAGGCCATGAAGAGCCACTCTG...GATGTGTAGCCAGGGAAGGCTCCCTTCACCAGTGTAAAGAGCTGATACAGTACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CCA 90 bp CTTCCCTGGCTACACATCCCTTCTGCTTCAAACGAAAGAAATGGAGTGAGCAGGCAGAGTGGCTCTTCATaGCCTGCAGGGTCTTCTGGT +
Preference number: 4 (lower is better)
Translates to: LPWLHIPSASNERNGVSRQSGSS*PAGSSG
Trigger: ACCAGAAGACCCTGCAGGCCATGAAGAGCCACTCTG...CCTGCTCACTCCATTTCTTTCGTTTGAAGCAGAAGGGATGTGTAGCCAGGGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CCA 90 bp AGTACTGTATCAGCTCTTTACACTGGTGAAGGGAGCCTTCCCTGGCTACACATCTTCCTTGAAGCACCGTaGCTGTGGGCCTTCTCAGAG +
Preference number: 4 (lower is better)
Translates to: STVSALYTGEGSLPWLHIFLEAP*LWAFSE
Trigger: CTCTGAGAAGGCCCACAGCCACGGTGCTTCAAGGAA...GATGTGTAGCCAGGGAAGGCTCCCTTCACCAGTGTAAAGAGCTGATACAGTACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CCA 90 bp CTGGCTACACATCCCTTCTGCTTCAAACGAAAGAAATGGAGTGAGCAGGACCTCATGCCCGTGACTCAATaGGGAATGGGGTGGAGGACT +
Preference number: 4 (lower is better)
Translates to: LATHPFCFKRKKWSEQDLMPVTQ*GMGWRT
Trigger: AGTCCTCCACCCCATTCCCCATTGAGTCACGGGCAT...GAGGTCCTGCTCACTCCATTTCTTTCGTTTGAAGCAGAAGGGATGTGTAGCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CCA 90 bp GAAGGGAGCCTTCCCTGGCTACACATCCCTTCTGCTTCAAACGAAAGAAATGGAATGCCCGTGACTCAATaGGGAATGGGGTGGAGGACT +
Preference number: 4 (lower is better)
Translates to: EGSLPWLHIPSASNERNGMPVTQ*GMGWRT
Trigger: AGTCCTCCACCCCATTCCCCATTGAGTCACGGGCAT...TCCATTTCTTTCGTTTGAAGCAGAAGGGATGTGTAGCCAGGGAAGGCTCCCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CCA 90 bp AGTACTGTATCAGCTCTTTACACTGGTGAAGGGAGCCTTCCCTGGCTACACATCATGCCCGTGACTCAATaGGGAATGGGGTGGAGGACT +
Preference number: 4 (lower is better)
Translates to: STVSALYTGEGSLPWLHIMPVTQ*GMGWRT
Trigger: AGTCCTCCACCCCATTCCCCATTGAGTCACGGGCAT...GATGTGTAGCCAGGGAAGGCTCCCTTCACCAGTGTAAAGAGCTGATACAGTACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CCA 90 bp CCCCCAAGTAATGCAGACCATGGTCACTGTCCCAAGATATCACTTGAACTCCGCCGTTTGGAAGAACGATaGCACTGGGGATATGCCCGT +
Preference number: 4 (lower is better)
Translates to: PPSNADHGHCPKISLELRRLEER*HWGYAR
Trigger: ACGGGCATATCCCCAGTGCCATCGTTCTTCCAAACG...GCGGAGTTCAAGTGATATCTTGGGACAGTGACCATGGTCTGCATTACTTGGGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103241.8
CDS-3UTR CCA 90 bp CTGGCTACACATCCCTTCTGCTTCAAACGAAAGAAATGGAGTGAGCAGGACCTCGTCGTGAGTGGCGTTTaGAAGAACGATGGCACTGGG +
Preference number: 4 (lower is better)
Translates to: LATHPFCFKRKKWSEQDLVVSGV*KNDGTG
Trigger: CCCAGTGCCATCGTTCTTCCAAACGCCACTCACGAC...GAGGTCCTGCTCACTCCATTTCTTTCGTTTGAAGCAGAAGGGATGTGTAGCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CCA 90 bp AATGGAGTGAGCAGGACCTCCCTTCGTTTCCGGCAAGTACACAGAAGCCTTGCTGGATCTCTCCCAGGATaGCTTTGGGGTTACTGTTTG +
Preference number: 4 (lower is better)
Translates to: NGVSRTSLRFRQVHRSLAGSLPG*LWGYCL
Trigger: CAAACAGTAACCCCAAAGCCATCCTGGGAGAGATCC...AGCAAGGCTTCTGTGTACTTGCCGGAAACGAAGGGAGGTCCTGCTCACTCCATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CCA 90 bp AGTGAGCAGGACCTCCCTTCGTTTCCGGCAAGTACACAGAAGCCTTGCTGTAGTGGATCTCTCCCAGGATaGCTTTGGGGTTACTGTTTG +
Preference number: 4 (lower is better)
Translates to: SEQDLPSFPASTQKPCCSGSLPG*LWGYCL
Trigger: CAAACAGTAACCCCAAAGCCATCCTGGGAGAGATCC...ACTACAGCAAGGCTTCTGTGTACTTGCCGGAAACGAAGGGAGGTCCTGCTCACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CCA 90 bp GAAGGGAGCCTTCCCTGGCTACACATCCCTTCTGCTTCAAACGAAAGAAATGGATTGGCACCCCAGGAGTaGTGGGGACATCTACTCTCT +
Preference number: 4 (lower is better)
Translates to: EGSLPWLHIPSASNERNGLAPQE*WGHLLS
Trigger: AGAGAGTAGATGTCCCCACCACTCCTGGGGTGCCAA...TCCATTTCTTTCGTTTGAAGCAGAAGGGATGTGTAGCCAGGGAAGGCTCCCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CCA 90 bp CCCCCAAGTAATGCAGACCATGGTCACTGTCCCAAGATATCACTTGAACTCCGCGGAGGGTGCCATTACTaGTATAGCTGCTCTGTCTGG +
Preference number: 4 (lower is better)
Translates to: PPSNADHGHCPKISLELRGGCHY*YSCSVW
Trigger: CCAGACAGAGCAGCTATACCAGTAATGGCACCCTCC...GCGGAGTTCAAGTGATATCTTGGGACAGTGACCATGGTCTGCATTACTTGGGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103241.8
CDS-3UTR CCA 90 bp CTTCCCTGGCTACACATCCCTTCTGCTTCAAACGAAAGAAATGGAGTGAGCAGGTCTTTAGTCCCGTCCTaGGGAGGGTGCCATTACTGG +
Preference number: 4 (lower is better)
Translates to: LPWLHIPSASNERNGVSRSLVPS*GGCHYW
Trigger: CCAGTAATGGCACCCTCCCCAGGACGGGACTAAAGA...CCTGCTCACTCCATTTCTTTCGTTTGAAGCAGAAGGGATGTGTAGCCAGGGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CCA 90 bp CCTTCTGCTTCAAACGAAAGAAATGGAGTGAGCAGGACCTCCCTTCGTTTCCGGTTGGATTCTCCAGACTaGACTTCCCACCGTACACCC +
Preference number: 4 (lower is better)
Translates to: PSASNERNGVSRTSLRFRLDSPD*TSHRTP
Trigger: GGGTGTACGGTGGGAAGTCCAGTCTGGAGAATCCAA...CCGGAAACGAAGGGAGGTCCTGCTCACTCCATTTCTTTCGTTTGAAGCAGAAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000077847.12
ENSMUST00000103239.10
CDS-3UTR TCA 90 bp GAAGGGAGCCTTCCCTGGCTACACATCCCTTCTGCTTCAAACGAAAGAAATGGACTGCGATTCGTTGCCTaGAGGGCGTCCTCTAAAAAC +
Preference number: 4 (lower is better)
Translates to: EGSLPWLHIPSASNERNGLRFVA*RASSKN
Trigger: GTTTTTAGAGGACGCCCTTCAGGCAACGAATCGCAG...TCCATTTCTTTCGTTTGAAGCAGAAGGGATGTGTAGCCAGGGAAGGCTCCCTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR TCA 90 bp AATGGAGTGAGCAGGACCTCCCTTCGTTTCCGGCAAGTACACAGAAGCCTTGCTATCTGCACATCGGGTTaGAAGCATTGGTACCACAGA +
Preference number: 4 (lower is better)
Translates to: NGVSRTSLRFRQVHRSLAICTSG*KHWYHR
Trigger: TCTGTGGTACCAATGCTTTCAACCCGATGTGCAGAT...AGCAAGGCTTCTGTGTACTTGCCGGAAACGAAGGGAGGTCCTGCTCACTCCATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR TCA 90 bp GTACACAGAAGCCTTGCTGTAGTAGCTACATGTGGCAAGTTCTGGTGTTACCAACTCCAGGACCCGCTGTaGGCCACCCATGTCGTTTTT +
Preference number: 4 (lower is better)
Translates to: VHRSLAVVATCGKFWCYQLQDPL*ATHVVF
Trigger: AAAAACGACATGGGTGGCTCACAGCGGGTCCTGGAG...TTGGTAACACCAGAACTTGCCACATGTAGCTACTACAGCAAGGCTTCTGTGTAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR TCA 90 bp GTGAGCAGGACCTCCCTTCGTTTCCGGCAAGTACACAGAAGCCTTGCTGTAGTAACTTGTTCAGTGGTCTaGCAGATGTGGTTTGCGGAA +
Preference number: 4 (lower is better)
Translates to: VSRTSLRFRQVHRSLAVVTCSVV*QMWFAE
Trigger: TTCCGCAAACCACATCTGTCAGACCACTGAACAAGT...TACTACAGCAAGGCTTCTGTGTACTTGCCGGAAACGAAGGGAGGTCCTGCTCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR TCA 90 bp ATCCTGGAGGGAAGGGGCGGCGTTGCTCAACAACAAATCGCTCTAGGTGGCTTTGTAATCTGGTGTAGTTaGAGGAGGCAAACTTTCGTG +
Preference number: 4 (lower is better)
Translates to: ILEGRGGVAQQQIALGGFVIWCS*RRQTFV
Trigger: CACGAAAGTTTGCCTCCTTCAACTACACCAGATTAC...AAAGCCACCTAGAGCGATTTGTTGTTGAGCAACGCCGCCCCTTCCCTCCAGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000078621.12
ENSMUST00000103239.10
CDS-3UTR GCA 90 bp CATCCCTTCTGCTTCAAACGAAAGAAATGGAGTGAGCAGGACCTCCCTTCGTTTAAGTCCAGCCTGTGCTaGGATTCGTTGCCTGAAGGG +
Preference number: 4 (lower is better)
Translates to: HPFCFKRKKWSEQDLPSFKSSLC*DSLPEG
Trigger: CCCTTCAGGCAACGAATCGCAGCACAGGCTGGACTT...AAACGAAGGGAGGTCCTGCTCACTCCATTTCTTTCGTTTGAAGCAGAAGGGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR GCA 90 bp CCCCCAAGTAATGCAGACCATGGTCACTGTCCCAAGATATCACTTGAACTCCGCCAATTTTCTCGATCCTaGTGTCTGGACCTCCACGTC +
Preference number: 4 (lower is better)
Translates to: PPSNADHGHCPKISLELRQFSRS*CLDLHV
Trigger: GACGTGGAGGTCCAGACAGCAGGATCGAGAAAATTG...GCGGAGTTCAAGTGATATCTTGGGACAGTGACCATGGTCTGCATTACTTGGGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103241.8
CDS-3UTR GCA 90 bp GTGAGCAGGACCTCCCTTCGTTTCCGGCAAGTACACAGAAGCCTTGCTGTAGTATTTGTCTTCGGGAACTaGTGTCCAAACAGAGTCTGG +
Preference number: 4 (lower is better)
Translates to: VSRTSLRFRQVHRSLAVVFVFGN*CPNRVW
Trigger: CCAGACTCTGTTTGGACAGCAGTTCCCGAAGACAAA...TACTACAGCAAGGCTTCTGTGTACTTGCCGGAAACGAAGGGAGGTCCTGCTCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR GCA 90 bp CTTCCCTGGCTACACATCCCTTCTGCTTCAAACGAAAGAAATGGAGTGAGCAGGGGTCTTGTAAGCTTCTaGGAGGCCGTGTTTGGCACA +
Preference number: 4 (lower is better)
Translates to: LPWLHIPSASNERNGVSRGLVSF*EAVFGT
Trigger: TGTGCCAAACACGGCCTCGCAGAAGCTTACAAGACC...CCTGCTCACTCCATTTCTTTCGTTTGAAGCAGAAGGGATGTGTAGCCAGGGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR GCA 90 bp ACACAGAAGCCTTGCTGTAGTAGCTACATGTGGCAAGTTCTGGTGTTACCAAAGTTCCGCTGGAGTCTGTaGACGACTGGGCGGATTCTG +
Preference number: 4 (lower is better)
Translates to: TQKPCCSSYMWQVLVLPKFRWSL*TTGRIL
Trigger: CAGAATCCGCCCAGTCGTGCACAGACTCCAGCGGAA...CTTTGGTAACACCAGAACTTGCCACATGTAGCTACTACAGCAAGGCTTCTGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR GCA 90 bp GTACACAGAAGCCTTGCTGTAGTAGCTACATGTGGCAAGTTCTGGTGTTACCAATGGCTCTTCATGGCCTaGAGGGTCTTCTGGTGGAGG +
Preference number: 4 (lower is better)
Translates to: VHRSLAVVATCGKFWCYQWLFMA*RVFWWR
Trigger: CCTCCACCAGAAGACCCTGCAGGCCATGAAGAGCCA...TTGGTAACACCAGAACTTGCCACATGTAGCTACTACAGCAAGGCTTCTGTGTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CCA 90 bp CCTTCTGCTTCAAACGAAAGAAATGGAGTGAGCAGGACCTCCCTTCGTTTCCGGGCCAGGCCTTGGTTTTaGTACTTTGTCTTCGGGAAC +
Preference number: 4 (lower is better)
Translates to: PSASNERNGVSRTSLRFRARPWF*YFVFGN
Trigger: GTTCCCGAAGACAAAGTACCAAAACCAAGGCCTGGC...CCGGAAACGAAGGGAGGTCCTGCTCACTCCATTTCTTTCGTTTGAAGCAGAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CCA 90 bp GTACACAGAAGCCTTGCTGTAGTAGCTACATGTGGCAAGTTCTGGTGTTACCAACTCATCGGCAATGGGTaGGACGGCAGAGTCCATCAG +
Preference number: 4 (lower is better)
Translates to: VHRSLAVVATCGKFWCYQLIGNG*DGRVHQ
Trigger: CTGATGGACTCTGCCGTCCCACCCATTGCCGATGAG...TTGGTAACACCAGAACTTGCCACATGTAGCTACTACAGCAAGGCTTCTGTGTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CCA 90 bp GTGAGCAGGACCTCCCTTCGTTTCCGGCAAGTACACAGAAGCCTTGCTGTAGTACCAGGGCTGTGGTTATaGAAAGCAAAGAAGTCTTCG +
Preference number: 4 (lower is better)
Translates to: VSRTSLRFRQVHRSLAVVPGLWL*KAKKSS
Trigger: CGAAGACTTCTTTGCTTTCCATAACCACAGCCCTGG...TACTACAGCAAGGCTTCTGTGTACTTGCCGGAAACGAAGGGAGGTCCTGCTCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000051419.15
ENSMUST00000078621.12
CDS-3UTR CCA 90 bp ATCCTGGAGGGAAGGGGCGGCGTTGCTCAACAACAAATCGCTCTAGGTGGCTTTTATCCTCCAGGGCTGTaGTTATGGAAAGCAAAGAAG +
Preference number: 4 (lower is better)
Translates to: ILEGRGGVAQQQIALGGFYPPGL*LWKAKK
Trigger: CTTCTTTGCTTTCCATAACCACAGCCCTGGAGGATA...AAAGCCACCTAGAGCGATTTGTTGTTGAGCAACGCCGCCCCTTCCCTCCAGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000078621.12
CDS-3UTR CCA 90 bp GAAGGGAGCCTTCCCTGGCTACACATCCCTTCTGCTTCAAACGAAAGAAATGGAGAGTCTGTGCACGACTaGGCGGATTCTGCGTCTTTA +
Preference number: 4 (lower is better)
Translates to: EGSLPWLHIPSASNERNGESVHD*ADSASL
Trigger: TAAAGACGCAGAATCCGCCCAGTCGTGCACAGACTC...TCCATTTCTTTCGTTTGAAGCAGAAGGGATGTGTAGCCAGGGAAGGCTCCCTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CCA 90 bp GCTACATGTGGCAAGTTCTGGTGTTACCAAAGTGACAGAGTTTCTTTGGCTACTTGGCGAAGCTTCCGCTaGAGTCTGTGCACGACTGGG +
Preference number: 4 (lower is better)
Translates to: ATCGKFWCYQSDRVSLATWRSFR*SLCTTG
Trigger: CCCAGTCGTGCACAGACTCCAGCGGAAGCTTCGCCA...AGTAGCCAAAGAAACTCTGTCACTTTGGTAACACCAGAACTTGCCACATGTAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CCA 90 bp GTGAGCAGGACCTCCCTTCGTTTCCGGCAAGTACACAGAAGCCTTGCTGTAGTAGAATCAATGTTCTGCTaGTATTCCTTGACGGGGCTG +
Preference number: 4 (lower is better)
Translates to: VSRTSLRFRQVHRSLAVVESMFC*YSLTGL
Trigger: CAGCCCCGTCAAGGAATACCAGCAGAACATTGATTC...TACTACAGCAAGGCTTCTGTGTACTTGCCGGAAACGAAGGGAGGTCCTGCTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CCA 90 bp CTTCCCTGGCTACACATCCCTTCTGCTTCAAACGAAAGAAATGGAGTGAGCAGGGCAGTTCCTTCCGACTaGTCAGCAGGTTGCTGTAGA +
Preference number: 4 (lower is better)
Translates to: LPWLHIPSASNERNGVSRAVPSD*SAGCCR
Trigger: TCTACAGCAACCTGCTGACCAGTCGGAAGGAACTGC...CCTGCTCACTCCATTTCTTTCGTTTGAAGCAGAAGGGATGTGTAGCCAGGGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CCA 90 bp GAAGGGAGCCTTCCCTGGCTACACATCCCTTCTGCTTCAAACGAAAGAAATGGAGCAGTTCCTTCCGACTaGTCAGCAGGTTGCTGTAGA +
Preference number: 4 (lower is better)
Translates to: EGSLPWLHIPSASNERNGAVPSD*SAGCCR
Trigger: TCTACAGCAACCTGCTGACCAGTCGGAAGGAACTGC...TCCATTTCTTTCGTTTGAAGCAGAAGGGATGTGTAGCCAGGGAAGGCTCCCTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CCA 90 bp GTACACAGAAGCCTTGCTGTAGTAGCTACATGTGGCAAGTTCTGGTGTTACCAAGCCTGCAGGGTCTTCTaGTGGAGGACAGGTGTGGAT +
Preference number: 4 (lower is better)
Translates to: VHRSLAVVATCGKFWCYQACRVF*WRTGVD
Trigger: ATCCACACCTGTCCTCCACCAGAAGACCCTGCAGGC...TTGGTAACACCAGAACTTGCCACATGTAGCTACTACAGCAAGGCTTCTGTGTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CCA 90 bp GTACACAGAAGCCTTGCTGTAGTAGCTACATGTGGCAAGTTCTGGTGTTACCAATGGGCCTTCTCAGAGTaGCTCTTCATGGCCTGCAGG +
Preference number: 4 (lower is better)
Translates to: VHRSLAVVATCGKFWCYQWAFSE*LFMACR
Trigger: CCTGCAGGCCATGAAGAGCCACTCTGAGAAGGCCCA...TTGGTAACACCAGAACTTGCCACATGTAGCTACTACAGCAAGGCTTCTGTGTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CCA 90 bp AGTACTGTATCAGCTCTTTACACTGGTGAAGGGAGCCTTCCCTGGCTACACATCGAAGAACGATGGCACTaGGGATATGCCCGTGACTCA +
Preference number: 4 (lower is better)
Translates to: STVSALYTGEGSLPWLHIEERWH*GYARDS
Trigger: TGAGTCACGGGCATATCCCCAGTGCCATCGTTCTTC...GATGTGTAGCCAGGGAAGGCTCCCTTCACCAGTGTAAAGAGCTGATACAGTACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CCA 90 bp CTGGCTACACATCCCTTCTGCTTCAAACGAAAGAAATGGAGTGAGCAGGACCTCCGTTTGGAAGAACGATaGCACTGGGGATATGCCCGT +
Preference number: 4 (lower is better)
Translates to: LATHPFCFKRKKWSEQDLRLEER*HWGYAR
Trigger: ACGGGCATATCCCCAGTGCCATCGTTCTTCCAAACG...GAGGTCCTGCTCACTCCATTTCTTTCGTTTGAAGCAGAAGGGATGTGTAGCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CCA 90 bp TCTGATCCTGGAGGGAAGGGGCGGCGTTGCTCAACAACAAATCGCTCTAGGTGGTGTGGGCATTCGAGTTaGAGAAGGATGTATTGTAGT +
Preference number: 4 (lower is better)
Translates to: SDPGGKGRRCSTTNRSRWCGHSS*RRMYCS
Trigger: ACTACAATACATCCTTCTCCAACTCGAATGCCCACA...CCACCTAGAGCGATTTGTTGTTGAGCAACGCCGCCCCTTCCCTCCAGGATCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103241.8
CDS-3UTR CCA 90 bp CCTTCTGCTTCAAACGAAAGAAATGGAGTGAGCAGGACCTCCCTTCGTTTCCGGTATTTCTGGGGAGTGTaGAGGGAGGGGAGTATAGAG +
Preference number: 4 (lower is better)
Translates to: PSASNERNGVSRTSLRFRYFWGV*REGSIE
Trigger: CTCTATACTCCCCTCCCTCCACACTCCCCAGAAATA...CCGGAAACGAAGGGAGGTCCTGCTCACTCCATTTCTTTCGTTTGAAGCAGAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CCA 90 bp TCTGATCCTGGAGGGAAGGGGCGGCGTTGCTCAACAACAAATCGCTCTAGGTGGATCTACTCTCTTGGTTaGACTATTTCTGGGGAGTGT +
Preference number: 4 (lower is better)
Translates to: SDPGGKGRRCSTTNRSRWIYSLG*TISGEC
Trigger: ACACTCCCCAGAAATAGTCCAACCAAGAGAGTAGAT...CCACCTAGAGCGATTTGTTGTTGAGCAACGCCGCCCCTTCCCTCCAGGATCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103241.8
CDS-3UTR CCA 90 bp GTACCCTCACAGCTTCCTCGCAACAGCAGGGACAGGATAAAGCCACACGGGAATGGACATCTACTCTCTTaGTTGGACTATTTCTGGGGA +
Preference number: 4 (lower is better)
Translates to: VPSQLPRNSRDRIKPHGNGHLLS*LDYFWG
Trigger: TCCCCAGAAATAGTCCAACCAAGAGAGTAGATGTCC...ATTCCCGTGTGGCTTTATCCTGTCCCTGCTGTTGCGAGGAAGCTGTGAGGGTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CCA 90 bp GAAGGGAGCCTTCCCTGGCTACACATCCCTTCTGCTTCAAACGAAAGAAATGGAGGAGGGTGCCATTACTaGTATAGCTGCTCTGTCTGG +
Preference number: 4 (lower is better)
Translates to: EGSLPWLHIPSASNERNGGGCHY*YSCSVW
Trigger: CCAGACAGAGCAGCTATACCAGTAATGGCACCCTCC...TCCATTTCTTTCGTTTGAAGCAGAAGGGATGTGTAGCCAGGGAAGGCTCCCTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CCA 90 bp GTACCCTCACAGCTTCCTCGCAACAGCAGGGACAGGATAAAGCCACACGGGAATCGTGTACTTGTTCAGTaGTCTGACAGATGTGGTTTG +
Preference number: 4 (lower is better)
Translates to: VPSQLPRNSRDRIKPHGNRVLVQ*SDRCGL
Trigger: CAAACCACATCTGTCAGACCACTGAACAAGTACACG...ATTCCCGTGTGGCTTTATCCTGTCCCTGCTGTTGCGAGGAAGCTGTGAGGGTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR TCA 90 bp GAAGGGAGCCTTCCCTGGCTACACATCCCTTCTGCTTCAAACGAAAGAAATGGACCATGCTTCTGTAAATaGCAGCATCACTGGCCAGGA +
Preference number: 4 (lower is better)
Translates to: EGSLPWLHIPSASNERNGPCFCK*QHHWPG
Trigger: TCCTGGCCAGTGATGCTGTCATTTACAGAAGCATGG...TCCATTTCTTTCGTTTGAAGCAGAAGGGATGTGTAGCCAGGGAAGGCTCCCTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR TCA 90 bp CTTCCCTGGCTACACATCCCTTCTGCTTCAAACGAAAGAAATGGAGTGAGCAGGCCATGCTTCTGTAAATaGCAGCATCACTGGCCAGGA +
Preference number: 4 (lower is better)
Translates to: LPWLHIPSASNERNGVSRPCFCK*QHHWPG
Trigger: TCCTGGCCAGTGATGCTGTCATTTACAGAAGCATGG...CCTGCTCACTCCATTTCTTTCGTTTGAAGCAGAAGGGATGTGTAGCCAGGGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR TCA 90 bp ATCCTGGAGGGAAGGGGCGGCGTTGCTCAACAACAAATCGCTCTAGGTGGCTTTCCACGGCGATTTCTCTaGAGAAGAAATAGACATAGT +
Preference number: 4 (lower is better)
Translates to: ILEGRGGVAQQQIALGGFPRRFL*RRNRHS
Trigger: ACTATGTCTATTTCTTCTTCAGAGAAATCGCCGTGG...AAAGCCACCTAGAGCGATTTGTTGTTGAGCAACGCCGCCCCTTCCCTCCAGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103241.8
CDS-3UTR TCA 90 bp CCTTCTGCTTCAAACGAAAGAAATGGAGTGAGCAGGACCTCCCTTCGTTTCCGGTTCATGTGGACCATCTaGTTGGATTCTCCAGACTGG +
Preference number: 4 (lower is better)
Translates to: PSASNERNGVSRTSLRFRFMWTI*LDSPDW
Trigger: CCAGTCTGGAGAATCCAATCAGATGGTCCACATGAA...CCGGAAACGAAGGGAGGTCCTGCTCACTCCATTTCTTTCGTTTGAAGCAGAAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR TCA 90 bp ACACAGAAGCCTTGCTGTAGTAGCTACATGTGGCAAGTTCTGGTGTTACCAAAGTCTGCTGGTATTCCTTaGCGGGGCTGTCAAAGAGGC +
Preference number: 4 (lower is better)
Translates to: TQKPCCSSYMWQVLVLPKSAGIP*RGCQRG
Trigger: GCCTCTTTGACAGCCCCGTCAAGGAATACCAGCAGA...CTTTGGTAACACCAGAACTTGCCACATGTAGCTACTACAGCAAGGCTTCTGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR TCA 90 bp GTGGCAAGTTCTGGTGTTACCAAAGTGACAGAGTTTCTTTGGCTACTTGTTTCTGGGGTGTTCTTTCCTTaGAGCACCGTGGCTGTGGGC +
Preference number: 4 (lower is better)
Translates to: VASSGVTKVTEFLWLLVSGVFFP*STVAVG
Trigger: GCCCACAGCCACGGTGCTTCAAGGAAAGAACACCCC...AGAAACAAGTAGCCAAAGAAACTCTGTCACTTTGGTAACACCAGAACTTGCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR TCA 90 bp AATGGAGTGAGCAGGACCTCCCTTCGTTTCCGGCAAGTACACAGAAGCCTTGCTGCTTCAGGAGATCATTaGGAGTATTCCTGGAATCCA +
Preference number: 4 (lower is better)
Translates to: NGVSRTSLRFRQVHRSLAASGDH*EYSWNP
Trigger: TGGATTCCAGGAATACTCTCAATGATCTCCTGAAGC...AGCAAGGCTTCTGTGTACTTGCCGGAAACGAAGGGAGGTCCTGCTCACTCCATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR GCA 90 bp CTGGCTACACATCCCTTCTGCTTCAAACGAAAGAAATGGAGTGAGCAGGACCTCCAATTTTCTCGATCCTaGTGTCTGGACCTCCACGTC +
Preference number: 4 (lower is better)
Translates to: LATHPFCFKRKKWSEQDLQFSRS*CLDLHV
Trigger: GACGTGGAGGTCCAGACAGCAGGATCGAGAAAATTG...GAGGTCCTGCTCACTCCATTTCTTTCGTTTGAAGCAGAAGGGATGTGTAGCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR GCA 90 bp GAAGGGAGCCTTCCCTGGCTACACATCCCTTCTGCTTCAAACGAAAGAAATGGACAATTTTCTCGATCCTaGTGTCTGGACCTCCACGTC +
Preference number: 4 (lower is better)
Translates to: EGSLPWLHIPSASNERNGQFSRS*CLDLHV
Trigger: GACGTGGAGGTCCAGACAGCAGGATCGAGAAAATTG...TCCATTTCTTTCGTTTGAAGCAGAAGGGATGTGTAGCCAGGGAAGGCTCCCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR GCA 90 bp AATGGAGTGAGCAGGACCTCCCTTCGTTTCCGGCAAGTACACAGAAGCCTTGCTTGTCGTTTTTACAAATaGGAGCCACGCGGGAATACA +
Preference number: 4 (lower is better)
Translates to: NGVSRTSLRFRQVHRSLACRFYK*EPRGNT
Trigger: TGTATTCCCGCGTGGCTCGCATTTGTAAAAACGACA...AGCAAGGCTTCTGTGTACTTGCCGGAAACGAAGGGAGGTCCTGCTCACTCCATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR GCA 90 bp CTGGCTACACATCCCTTCTGCTTCAAACGAAAGAAATGGAGTGAGCAGGACCTCGAGTCTGGGGTTTTCTaGTCTTTGAACCGCCCTTTG +
Preference number: 4 (lower is better)
Translates to: LATHPFCFKRKKWSEQDLESGVF*SLNRPL
Trigger: CAAAGGGCGGTTCAAAGAGCAGAAAACCCCAGACTC...GAGGTCCTGCTCACTCCATTTCTTTCGTTTGAAGCAGAAGGGATGTGTAGCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR GCA 90 bp CCTTCTGCTTCAAACGAAAGAAATGGAGTGAGCAGGACCTCCCTTCGTTTCCGGTTTGTCTTCGGGAACTaGTGTCCAAACAGAGTCTGG +
Preference number: 4 (lower is better)
Translates to: PSASNERNGVSRTSLRFRFVFGN*CPNRVW
Trigger: CCAGACTCTGTTTGGACAGCAGTTCCCGAAGACAAA...CCGGAAACGAAGGGAGGTCCTGCTCACTCCATTTCTTTCGTTTGAAGCAGAAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR GCA 90 bp CCTTCTGCTTCAAACGAAAGAAATGGAGTGAGCAGGACCTCCCTTCGTTTCCGGCGACTGGGCGGATTCTaGGTCTTTATGGATCTTTCT +
Preference number: 4 (lower is better)
Translates to: PSASNERNGVSRTSLRFRRLGGF*VFMDLS
Trigger: AGAAAGATCCATAAAGACGCAGAATCCGCCCAGTCG...CCGGAAACGAAGGGAGGTCCTGCTCACTCCATTTCTTTCGTTTGAAGCAGAAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR GCA 90 bp CCCCCAAGTAATGCAGACCATGGTCACTGTCCCAAGATATCACTTGAACTCCGCGGAGAATCAATGTTCTaGTGGTATTCCTTGACGGGG +
Preference number: 4 (lower is better)
Translates to: PPSNADHGHCPKISLELRGESMF*WYSLTG
Trigger: CCCCGTCAAGGAATACCAGCAGAACATTGATTCTCC...GCGGAGTTCAAGTGATATCTTGGGACAGTGACCATGGTCTGCATTACTTGGGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103241.8
CDS-3UTR GCA 90 bp CCTTCTGCTTCAAACGAAAGAAATGGAGTGAGCAGGACCTCCCTTCGTTTCCGGGGAGAATCAATGTTCTaGTGGTATTCCTTGACGGGG +
Preference number: 4 (lower is better)
Translates to: PSASNERNGVSRTSLRFRGESMF*WYSLTG
Trigger: CCCCGTCAAGGAATACCAGCAGAACATTGATTCTCC...CCGGAAACGAAGGGAGGTCCTGCTCACTCCATTTCTTTCGTTTGAAGCAGAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR GCA 90 bp CCTTCTGCTTCAAACGAAAGAAATGGAGTGAGCAGGACCTCCCTTCGTTTCCGGGACTGGTCAGCAGGTTaGTGTAGAGTTTGGGAGAAT +
Preference number: 4 (lower is better)
Translates to: PSASNERNGVSRTSLRFRDWSAG*CRVWEN
Trigger: ATTCTCCCAAACTCTACAGCAACCTGCTGACCAGTC...CCGGAAACGAAGGGAGGTCCTGCTCACTCCATTTCTTTCGTTTGAAGCAGAAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR GCA 90 bp GCTACATGTGGCAAGTTCTGGTGTTACCAAAGTGACAGAGTTTCTTTGGCTACTTGGCTCTTCATGGCCTaGAGGGTCTTCTGGTGGAGG +
Preference number: 4 (lower is better)
Translates to: ATCGKFWCYQSDRVSLATWLFMA*RVFWWR
Trigger: CCTCCACCAGAAGACCCTGCAGGCCATGAAGAGCCA...AGTAGCCAAAGAAACTCTGTCACTTTGGTAACACCAGAACTTGCCACATGTAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR GCA 90 bp GTGGCAAGTTCTGGTGTTACCAAAGTGACAGAGTTTCTTTGGCTACTTGTTTCTTCCACAGACCGCCGGTaGTCCCGCTTACTGGATGAC +
Preference number: 4 (lower is better)
Translates to: VASSGVTKVTEFLWLLVSSTDRR*SRLLDD
Trigger: GTCATCCAGTAAGCGGGAGCACCGGCGGTCTGTGGA...AGAAACAAGTAGCCAAAGAAACTCTGTCACTTTGGTAACACCAGAACTTGCCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CCA 90 bp ATCCTGGAGGGAAGGGGCGGCGTTGCTCAACAACAAATCGCTCTAGGTGGCTTTGGAAATCAGCCACTGTaGCAGAATAGAGTTTTCCAT +
Preference number: 4 (lower is better)
Translates to: ILEGRGGVAQQQIALGGFGNQPL*QNRVFH
Trigger: ATGGAAAACTCTATTCTGCCACAGTGGCTGATTTCC...AAAGCCACCTAGAGCGATTTGTTGTTGAGCAACGCCGCCCCTTCCCTCCAGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103241.8
CDS-3UTR CCA 90 bp AATGGAGTGAGCAGGACCTCCCTTCGTTTCCGGCAAGTACACAGAAGCCTTGCTGGCATGAAGGAAGTGTaGTTCTTTGATCCACTTGGA +
Preference number: 4 (lower is better)
Translates to: NGVSRTSLRFRQVHRSLAGMKEV*FFDPLG
Trigger: TCCAAGTGGATCAAAGAACCACACTTCCTTCATGCC...AGCAAGGCTTCTGTGTACTTGCCGGAAACGAAGGGAGGTCCTGCTCACTCCATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CCA 90 bp CTTCCCTGGCTACACATCCCTTCTGCTTCAAACGAAAGAAATGGAGTGAGCAGGGCCAGGCCTTGGTTTTaGTACTTTGTCTTCGGGAAC +
Preference number: 4 (lower is better)
Translates to: LPWLHIPSASNERNGVSRARPWF*YFVFGN
Trigger: GTTCCCGAAGACAAAGTACCAAAACCAAGGCCTGGC...CCTGCTCACTCCATTTCTTTCGTTTGAAGCAGAAGGGATGTGTAGCCAGGGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CCA 90 bp GTGGCAAGTTCTGGTGTTACCAAAGTGACAGAGTTTCTTTGGCTACTTGTTTCTCTGCGAGGCCGTGTTTaGCACAACAGCCAGGCCTTG +
Preference number: 4 (lower is better)
Translates to: VASSGVTKVTEFLWLLVSLRGRV*HNSQAL
Trigger: CAAGGCCTGGCTGTTGTGCCAAACACGGCCTCGCAG...AGAAACAAGTAGCCAAAGAAACTCTGTCACTTTGGTAACACCAGAACTTGCCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CCA 90 bp CTACATGTGGCAAGTTCTGGTGTTACCAAAGTGACAGAGTTTCTTTGGCTACTTCTGCGAGGCCGTGTTTaGCACAACAGCCAGGCCTTG +
Preference number: 4 (lower is better)
Translates to: LHVASSGVTKVTEFLWLLLRGRV*HNSQAL
Trigger: CAAGGCCTGGCTGTTGTGCCAAACACGGCCTCGCAG...AAGTAGCCAAAGAAACTCTGTCACTTTGGTAACACCAGAACTTGCCACATGTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CCA 90 bp GCTACATGTGGCAAGTTCTGGTGTTACCAAAGTGACAGAGTTTCTTTGGCTACTCTCATCGGCAATGGGTaGGACGGCAGAGTCCATCAG +
Preference number: 4 (lower is better)
Translates to: ATCGKFWCYQSDRVSLATLIGNG*DGRVHQ
Trigger: CTGATGGACTCTGCCGTCCCACCCATTGCCGATGAG...AGTAGCCAAAGAAACTCTGTCACTTTGGTAACACCAGAACTTGCCACATGTAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CCA 90 bp CTACATGTGGCAAGTTCTGGTGTTACCAAAGTGACAGAGTTTCTTTGGCTACTTAGGGCTCATCGGCAATaGGTGGGACGGCAGAGTCCA +
Preference number: 4 (lower is better)
Translates to: LHVASSGVTKVTEFLWLLRAHRQ*VGRQSP
Trigger: TGGACTCTGCCGTCCCACCCATTGCCGATGAGCCCT...AAGTAGCCAAAGAAACTCTGTCACTTTGGTAACACCAGAACTTGCCACATGTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CCA 90 bp CATGTGGCAAGTTCTGGTGTTACCAAAGTGACAGAGTTTCTTTGGCTACTTGTTAGGGCTCATCGGCAATaGGTGGGACGGCAGAGTCCA +
Preference number: 4 (lower is better)
Translates to: HVASSGVTKVTEFLWLLVRAHRQ*VGRQSP
Trigger: TGGACTCTGCCGTCCCACCCATTGCCGATGAGCCCT...AACAAGTAGCCAAAGAAACTCTGTCACTTTGGTAACACCAGAACTTGCCACATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CCA 90 bp CTACATGTGGCAAGTTCTGGTGTTACCAAAGTGACAGAGTTTCTTTGGCTACTTTGGCAGTCCCCTAGGTaGGCTGTGTTGCCGTACTCC +
Preference number: 4 (lower is better)
Translates to: LHVASSGVTKVTEFLWLLWQSPR*AVLPYS
Trigger: GGAGTACGGCAACACAGCCCACCTAGGGGACTGCCA...AAGTAGCCAAAGAAACTCTGTCACTTTGGTAACACCAGAACTTGCCACATGTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CCA 90 bp AATGGAGTGAGCAGGACCTCCCTTCGTTTCCGGCAAGTACACAGAAGCCTTGCTTGTGGACCATCTGATTaGATTCTCCAGACTGGACTT +
Preference number: 4 (lower is better)
Translates to: NGVSRTSLRFRQVHRSLACGPSD*ILQTGL
Trigger: AAGTCCAGTCTGGAGAATCCAATCAGATGGTCCACA...AGCAAGGCTTCTGTGTACTTGCCGGAAACGAAGGGAGGTCCTGCTCACTCCATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CCA 90 bp GTGAGCAGGACCTCCCTTCGTTTCCGGCAAGTACACAGAAGCCTTGCTGTAGTATGTGGACCATCTGATTaGATTCTCCAGACTGGACTT +
Preference number: 4 (lower is better)
Translates to: VSRTSLRFRQVHRSLAVVCGPSD*ILQTGL
Trigger: AAGTCCAGTCTGGAGAATCCAATCAGATGGTCCACA...TACTACAGCAAGGCTTCTGTGTACTTGCCGGAAACGAAGGGAGGTCCTGCTCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CCA 90 bp CATGTGGCAAGTTCTGGTGTTACCAAAGTGACAGAGTTTCTTTGGCTACTTGTTTGGCGAAGCTTCCGCTaGAGTCTGTGCACGACTGGG +
Preference number: 4 (lower is better)
Translates to: HVASSGVTKVTEFLWLLVWRSFR*SLCTTG
Trigger: CCCAGTCGTGCACAGACTCCAGCGGAAGCTTCGCCA...AACAAGTAGCCAAAGAAACTCTGTCACTTTGGTAACACCAGAACTTGCCACATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CCA 90 bp CCTTCTGCTTCAAACGAAAGAAATGGAGTGAGCAGGACCTCCCTTCGTTTCCGGGAATCAATGTTCTGCTaGTATTCCTTGACGGGGCTG +
Preference number: 4 (lower is better)
Translates to: PSASNERNGVSRTSLRFRESMFC*YSLTGL
Trigger: CAGCCCCGTCAAGGAATACCAGCAGAACATTGATTC...CCGGAAACGAAGGGAGGTCCTGCTCACTCCATTTCTTTCGTTTGAAGCAGAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CCA 90 bp GCTACATGTGGCAAGTTCTGGTGTTACCAAAGTGACAGAGTTTCTTTGGCTACTTGGGCCTTCTCAGAGTaGCTCTTCATGGCCTGCAGG +
Preference number: 4 (lower is better)
Translates to: ATCGKFWCYQSDRVSLATWAFSE*LFMACR
Trigger: CCTGCAGGCCATGAAGAGCCACTCTGAGAAGGCCCA...AGTAGCCAAAGAAACTCTGTCACTTTGGTAACACCAGAACTTGCCACATGTAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CCA 90 bp CATGTGGCAAGTTCTGGTGTTACCAAAGTGACAGAGTTTCTTTGGCTACTTGTTGAAGCACCGTGGCTGTaGGCCTTCTCAGAGTGGCTC +
Preference number: 4 (lower is better)
Translates to: HVASSGVTKVTEFLWLLVEAPWL*AFSEWL
Trigger: GAGCCACTCTGAGAAGGCCCACAGCCACGGTGCTTC...AACAAGTAGCCAAAGAAACTCTGTCACTTTGGTAACACCAGAACTTGCCACATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CCA 90 bp ACACAGAAGCCTTGCTGTAGTAGCTACATGTGGCAAGTTCTGGTGTTACCAAAGTTCCTTGAAGCACCGTaGCTGTGGGCCTTCTCAGAG +
Preference number: 4 (lower is better)
Translates to: TQKPCCSSYMWQVLVLPKFLEAP*LWAFSE
Trigger: CTCTGAGAAGGCCCACAGCCACGGTGCTTCAAGGAA...CTTTGGTAACACCAGAACTTGCCACATGTAGCTACTACAGCAAGGCTTCTGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CCA 90 bp ACACAGAAGCCTTGCTGTAGTAGCTACATGTGGCAAGTTCTGGTGTTACCAAAGATGCCCGTGACTCAATaGGGAATGGGGTGGAGGACT +
Preference number: 4 (lower is better)
Translates to: TQKPCCSSYMWQVLVLPKMPVTQ*GMGWRT
Trigger: AGTCCTCCACCCCATTCCCCATTGAGTCACGGGCAT...CTTTGGTAACACCAGAACTTGCCACATGTAGCTACTACAGCAAGGCTTCTGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CCA 90 bp CATCCCTTCTGCTTCAAACGAAAGAAATGGAGTGAGCAGGACCTCCCTTCGTTTCGTTTGGAAGAACGATaGCACTGGGGATATGCCCGT +
Preference number: 4 (lower is better)
Translates to: HPFCFKRKKWSEQDLPSFRLEER*HWGYAR
Trigger: ACGGGCATATCCCCAGTGCCATCGTTCTTCCAAACG...AAACGAAGGGAGGTCCTGCTCACTCCATTTCTTTCGTTTGAAGCAGAAGGGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CCA 90 bp ACACAGAAGCCTTGCTGTAGTAGCTACATGTGGCAAGTTCTGGTGTTACCAAAGGTCGTGAGTGGCGTTTaGAAGAACGATGGCACTGGG +
Preference number: 4 (lower is better)
Translates to: TQKPCCSSYMWQVLVLPKVVSGV*KNDGTG
Trigger: CCCAGTGCCATCGTTCTTCCAAACGCCACTCACGAC...CTTTGGTAACACCAGAACTTGCCACATGTAGCTACTACAGCAAGGCTTCTGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CCA 90 bp GGAATGTTTATCATGGCAAGGGTGGGTGCTGCTTCTGATCCTGGAGGGAAGGGGTGTGGGCATTCGAGTTaGAGAAGGATGTATTGTAGT +
Preference number: 4 (lower is better)
Translates to: GMFIMARVGAASDPGGKGCGHSS*RRMYCS
Trigger: ACTACAATACATCCTTCTCCAACTCGAATGCCCACA...CCCCTTCCCTCCAGGATCAGAAGCAGCACCCACCCTTGCCATGATAAACATTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103241.8
CDS-3UTR CCA 90 bp GAAGGGAGCCTTCCCTGGCTACACATCCCTTCTGCTTCAAACGAAAGAAATGGAGGATCTCTCCCAGGATaGCTTTGGGGTTACTGTTTG +
Preference number: 4 (lower is better)
Translates to: EGSLPWLHIPSASNERNGGSLPG*LWGYCL
Trigger: CAAACAGTAACCCCAAAGCCATCCTGGGAGAGATCC...TCCATTTCTTTCGTTTGAAGCAGAAGGGATGTGTAGCCAGGGAAGGCTCCCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CCA 90 bp CTGGCTACACATCCCTTCTGCTTCAAACGAAAGAAATGGAGTGAGCAGGACCTCTATTTCTGGGGAGTGTaGAGGGAGGGGAGTATAGAG +
Preference number: 4 (lower is better)
Translates to: LATHPFCFKRKKWSEQDLYFWGV*REGSIE
Trigger: CTCTATACTCCCCTCCCTCCACACTCCCCAGAAATA...GAGGTCCTGCTCACTCCATTTCTTTCGTTTGAAGCAGAAGGGATGTGTAGCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CCA 90 bp ACACAGAAGCCTTGCTGTAGTAGCTACATGTGGCAAGTTCTGGTGTTACCAAAGTGGTTGGACTATTTCTaGGGAGTGTGGAGGGAGGGG +
Preference number: 4 (lower is better)
Translates to: TQKPCCSSYMWQVLVLPKWLDYF*GVWREG
Trigger: CCCCTCCCTCCACACTCCCCAGAAATAGTCCAACCA...CTTTGGTAACACCAGAACTTGCCACATGTAGCTACTACAGCAAGGCTTCTGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CCA 90 bp GTACACAGAAGCCTTGCTGTAGTAGCTACATGTGGCAAGTTCTGGTGTTACCAATGGTTGGACTATTTCTaGGGAGTGTGGAGGGAGGGG +
Preference number: 4 (lower is better)
Translates to: VHRSLAVVATCGKFWCYQWLDYF*GVWREG
Trigger: CCCCTCCCTCCACACTCCCCAGAAATAGTCCAACCA...TTGGTAACACCAGAACTTGCCACATGTAGCTACTACAGCAAGGCTTCTGTGTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CCA 90 bp ATCCTGGAGGGAAGGGGCGGCGTTGCTCAACAACAAATCGCTCTAGGTGGCTTTATCTACTCTCTTGGTTaGACTATTTCTGGGGAGTGT +
Preference number: 4 (lower is better)
Translates to: ILEGRGGVAQQQIALGGFIYSLG*TISGEC
Trigger: ACACTCCCCAGAAATAGTCCAACCAAGAGAGTAGAT...AAAGCCACCTAGAGCGATTTGTTGTTGAGCAACGCCGCCCCTTCCCTCCAGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103241.8
CDS-3UTR CCA 90 bp ACACAGAAGCCTTGCTGTAGTAGCTACATGTGGCAAGTTCTGGTGTTACCAAAGTTGGCACCCCAGGAGTaGTGGGGACATCTACTCTCT +
Preference number: 4 (lower is better)
Translates to: TQKPCCSSYMWQVLVLPKLAPQE*WGHLLS
Trigger: AGAGAGTAGATGTCCCCACCACTCCTGGGGTGCCAA...CTTTGGTAACACCAGAACTTGCCACATGTAGCTACTACAGCAAGGCTTCTGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CCA 90 bp GTACACAGAAGCCTTGCTGTAGTAGCTACATGTGGCAAGTTCTGGTGTTACCAATTCCAGAGAAGTCATTaGCACCCCAGGAGTGGTGGG +
Preference number: 4 (lower is better)
Translates to: VHRSLAVVATCGKFWCYQFQRSH*HPRSGG
Trigger: CCCACCACTCCTGGGGTGCCAATGACTTCTCTGGAA...TTGGTAACACCAGAACTTGCCACATGTAGCTACTACAGCAAGGCTTCTGTGTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CCA 90 bp ACACAGAAGCCTTGCTGTAGTAGCTACATGTGGCAAGTTCTGGTGTTACCAAAGTTCCAGAGAAGTCATTaGCACCCCAGGAGTGGTGGG +
Preference number: 4 (lower is better)
Translates to: TQKPCCSSYMWQVLVLPKFQRSH*HPRSGG
Trigger: CCCACCACTCCTGGGGTGCCAATGACTTCTCTGGAA...CTTTGGTAACACCAGAACTTGCCACATGTAGCTACTACAGCAAGGCTTCTGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CCA 90 bp GTACACAGAAGCCTTGCTGTAGTAGCTACATGTGGCAAGTTCTGGTGTTACCAATCTTTAGTCCCGTCCTaGGGAGGGTGCCATTACTGG +
Preference number: 4 (lower is better)
Translates to: VHRSLAVVATCGKFWCYQSLVPS*GGCHYW
Trigger: CCAGTAATGGCACCCTCCCCAGGACGGGACTAAAGA...TTGGTAACACCAGAACTTGCCACATGTAGCTACTACAGCAAGGCTTCTGTGTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CCA 90 bp AATGGAGTGAGCAGGACCTCCCTTCGTTTCCGGCAAGTACACAGAAGCCTTGCTCGTGTACTTGTTCAGTaGTCTGACAGATGTGGTTTG +
Preference number: 4 (lower is better)
Translates to: NGVSRTSLRFRQVHRSLARVLVQ*SDRCGL
Trigger: CAAACCACATCTGTCAGACCACTGAACAAGTACACG...AGCAAGGCTTCTGTGTACTTGCCGGAAACGAAGGGAGGTCCTGCTCACTCCATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CCA 90 bp AGTGAGCAGGACCTCCCTTCGTTTCCGGCAAGTACACAGAAGCCTTGCTGTAGTCGTGTACTTGTTCAGTaGTCTGACAGATGTGGTTTG +
Preference number: 4 (lower is better)
Translates to: SEQDLPSFPASTQKPCCSRVLVQ*SDRCGL
Trigger: CAAACCACATCTGTCAGACCACTGAACAAGTACACG...ACTACAGCAAGGCTTCTGTGTACTTGCCGGAAACGAAGGGAGGTCCTGCTCACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CCA 90 bp GTGAGCAGGACCTCCCTTCGTTTCCGGCAAGTACACAGAAGCCTTGCTGTAGTACGTGTACTTGTTCAGTaGTCTGACAGATGTGGTTTG +
Preference number: 4 (lower is better)
Translates to: VSRTSLRFRQVHRSLAVVRVLVQ*SDRCGL
Trigger: CAAACCACATCTGTCAGACCACTGAACAAGTACACG...TACTACAGCAAGGCTTCTGTGTACTTGCCGGAAACGAAGGGAGGTCCTGCTCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR TCA 90 bp GTACACAGAAGCCTTGCTGTAGTAGCTACATGTGGCAAGTTCTGGTGTTACCAACTGCGATTCGTTGCCTaGAGGGCGTCCTCTAAAAAC +
Preference number: 4 (lower is better)
Translates to: VHRSLAVVATCGKFWCYQLRFVA*RASSKN
Trigger: GTTTTTAGAGGACGCCCTTCAGGCAACGAATCGCAG...TTGGTAACACCAGAACTTGCCACATGTAGCTACTACAGCAAGGCTTCTGTGTAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR TCA 90 bp GAAGGGAGCCTTCCCTGGCTACACATCCCTTCTGCTTCAAACGAAAGAAATGGAATCTGCACATCGGGTTaGAAGCATTGGTACCACAGA +
Preference number: 4 (lower is better)
Translates to: EGSLPWLHIPSASNERNGICTSG*KHWYHR
Trigger: TCTGTGGTACCAATGCTTTCAACCCGATGTGCAGAT...TCCATTTCTTTCGTTTGAAGCAGAAGGGATGTGTAGCCAGGGAAGGCTCCCTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR TCA 90 bp GTGAGCAGGACCTCCCTTCGTTTCCGGCAAGTACACAGAAGCCTTGCTGTAGTACCATATTCTATGGCATaGAGGAAGTGTGGTTCTTTG +
Preference number: 4 (lower is better)
Translates to: VSRTSLRFRQVHRSLAVVPYSMA*RKCGSL
Trigger: CAAAGAACCACACTTCCTTCATGCCATAGAATATGG...TACTACAGCAAGGCTTCTGTGTACTTGCCGGAAACGAAGGGAGGTCCTGCTCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR TCA 90 bp AGTGAGCAGGACCTCCCTTCGTTTCCGGCAAGTACACAGAAGCCTTGCTGTAGTCCATATTCTATGGCATaGAGGAAGTGTGGTTCTTTG +
Preference number: 4 (lower is better)
Translates to: SEQDLPSFPASTQKPCCSPYSMA*RKCGSL
Trigger: CAAAGAACCACACTTCCTTCATGCCATAGAATATGG...ACTACAGCAAGGCTTCTGTGTACTTGCCGGAAACGAAGGGAGGTCCTGCTCACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR TCA 90 bp GTGAGCAGGACCTCCCTTCGTTTCCGGCAAGTACACAGAAGCCTTGCTGTAGTACCACGGCGATTTCTCTaGAGAAGAAATAGACATAGT +
Preference number: 4 (lower is better)
Translates to: VSRTSLRFRQVHRSLAVVPRRFL*RRNRHS
Trigger: ACTATGTCTATTTCTTCTTCAGAGAAATCGCCGTGG...TACTACAGCAAGGCTTCTGTGTACTTGCCGGAAACGAAGGGAGGTCCTGCTCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR TCA 90 bp GAAGGGAGCCTTCCCTGGCTACACATCCCTTCTGCTTCAAACGAAAGAAATGGATTCATGTGGACCATCTaGTTGGATTCTCCAGACTGG +
Preference number: 4 (lower is better)
Translates to: EGSLPWLHIPSASNERNGFMWTI*LDSPDW
Trigger: CCAGTCTGGAGAATCCAATCAGATGGTCCACATGAA...TCCATTTCTTTCGTTTGAAGCAGAAGGGATGTGTAGCCAGGGAAGGCTCCCTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR TCA 90 bp AGTACTGTATCAGCTCTTTACACTGGTGAAGGGAGCCTTCCCTGGCTACACATCTTCATGTGGACCATCTaGTTGGATTCTCCAGACTGG +
Preference number: 4 (lower is better)
Translates to: STVSALYTGEGSLPWLHIFMWTI*LDSPDW
Trigger: CCAGTCTGGAGAATCCAATCAGATGGTCCACATGAA...GATGTGTAGCCAGGGAAGGCTCCCTTCACCAGTGTAAAGAGCTGATACAGTACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR TCA 90 bp CTGGCTACACATCCCTTCTGCTTCAAACGAAAGAAATGGAGTGAGCAGGACCTCACTTGTTCAGTGGTCTaGCAGATGTGGTTTGCGGAA +
Preference number: 4 (lower is better)
Translates to: LATHPFCFKRKKWSEQDLTCSVV*QMWFAE
Trigger: TTCCGCAAACCACATCTGTCAGACCACTGAACAAGT...GAGGTCCTGCTCACTCCATTTCTTTCGTTTGAAGCAGAAGGGATGTGTAGCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR GCA 90 bp GCTACATGTGGCAAGTTCTGGTGTTACCAAAGTGACAGAGTTTCTTTGGCTACTAAGTCCAGCCTGTGCTaGGATTCGTTGCCTGAAGGG +
Preference number: 4 (lower is better)
Translates to: ATCGKFWCYQSDRVSLATKSSLC*DSLPEG
Trigger: CCCTTCAGGCAACGAATCGCAGCACAGGCTGGACTT...AGTAGCCAAAGAAACTCTGTCACTTTGGTAACACCAGAACTTGCCACATGTAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR GCA 90 bp AGTACTGTATCAGCTCTTTACACTGGTGAAGGGAGCCTTCCCTGGCTACACATCATCAAACGGGCATCGTaGCAGGCCACTAATTTCTTC +
Preference number: 4 (lower is better)
Translates to: STVSALYTGEGSLPWLHIIKRAS*QATNFF
Trigger: GAAGAAATTAGTGGCCTGGCACGATGCCCGTTTGAT...GATGTGTAGCCAGGGAAGGCTCCCTTCACCAGTGTAAAGAGCTGATACAGTACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR GCA 90 bp CTTCCCTGGCTACACATCCCTTCTGCTTCAAACGAAAGAAATGGAGTGAGCAGGTTTGTCTTCGGGAACTaGTGTCCAAACAGAGTCTGG +
Preference number: 4 (lower is better)
Translates to: LPWLHIPSASNERNGVSRFVFGN*CPNRVW
Trigger: CCAGACTCTGTTTGGACAGCAGTTCCCGAAGACAAA...CCTGCTCACTCCATTTCTTTCGTTTGAAGCAGAAGGGATGTGTAGCCAGGGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR GCA 90 bp CTGGCTACACATCCCTTCTGCTTCAAACGAAAGAAATGGAGTGAGCAGGACCTCTTTGTCTTCGGGAACTaGTGTCCAAACAGAGTCTGG +
Preference number: 4 (lower is better)
Translates to: LATHPFCFKRKKWSEQDLFVFGN*CPNRVW
Trigger: CCAGACTCTGTTTGGACAGCAGTTCCCGAAGACAAA...GAGGTCCTGCTCACTCCATTTCTTTCGTTTGAAGCAGAAGGGATGTGTAGCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR GCA 90 bp AGTACTGTATCAGCTCTTTACACTGGTGAAGGGAGCCTTCCCTGGCTACACATCTTTGTCTTCGGGAACTaGTGTCCAAACAGAGTCTGG +
Preference number: 4 (lower is better)
Translates to: STVSALYTGEGSLPWLHIFVFGN*CPNRVW
Trigger: CCAGACTCTGTTTGGACAGCAGTTCCCGAAGACAAA...GATGTGTAGCCAGGGAAGGCTCCCTTCACCAGTGTAAAGAGCTGATACAGTACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR GCA 90 bp AATGGAGTGAGCAGGACCTCCCTTCGTTTCCGGCAAGTACACAGAAGCCTTGCTGGTCACGTGATGCAATaGAAGACTTTTTACACGATC +
Preference number: 4 (lower is better)
Translates to: NGVSRTSLRFRQVHRSLAGHVMQ*KTFYTI
Trigger: GATCGTGTAAAAAGTCTTGCATTGCATCACGTGACC...AGCAAGGCTTCTGTGTACTTGCCGGAAACGAAGGGAGGTCCTGCTCACTCCATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR GCA 90 bp CATGTGGCAAGTTCTGGTGTTACCAAAGTGACAGAGTTTCTTTGGCTACTTGTTCCGTACTCCGTGTCCTaGTCATATCCTCCAGGGCTG +
Preference number: 4 (lower is better)
Translates to: HVASSGVTKVTEFLWLLVPYSVS*SYPPGL
Trigger: CAGCCCTGGAGGATATGAGCAGGACACGGAGTACGG...AACAAGTAGCCAAAGAAACTCTGTCACTTTGGTAACACCAGAACTTGCCACATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000051419.15
ENSMUST00000078621.12
CDS-3UTR GCA 90 bp AGTACTGTATCAGCTCTTTACACTGGTGAAGGGAGCCTTCCCTGGCTACACATCCGACTGGGCGGATTCTaGGTCTTTATGGATCTTTCT +
Preference number: 4 (lower is better)
Translates to: STVSALYTGEGSLPWLHIRLGGF*VFMDLS
Trigger: AGAAAGATCCATAAAGACGCAGAATCCGCCCAGTCG...GATGTGTAGCCAGGGAAGGCTCCCTTCACCAGTGTAAAGAGCTGATACAGTACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR GCA 90 bp CTTCCCTGGCTACACATCCCTTCTGCTTCAAACGAAAGAAATGGAGTGAGCAGGCGACTGGGCGGATTCTaGGTCTTTATGGATCTTTCT +
Preference number: 4 (lower is better)
Translates to: LPWLHIPSASNERNGVSRRLGGF*VFMDLS
Trigger: AGAAAGATCCATAAAGACGCAGAATCCGCCCAGTCG...CCTGCTCACTCCATTTCTTTCGTTTGAAGCAGAAGGGATGTGTAGCCAGGGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR GCA 90 bp CTACATGTGGCAAGTTCTGGTGTTACCAAAGTGACAGAGTTTCTTTGGCTACTTTTCCGCTGGAGTCTGTaGACGACTGGGCGGATTCTG +
Preference number: 4 (lower is better)
Translates to: LHVASSGVTKVTEFLWLLFRWSL*TTGRIL
Trigger: CAGAATCCGCCCAGTCGTGCACAGACTCCAGCGGAA...AAGTAGCCAAAGAAACTCTGTCACTTTGGTAACACCAGAACTTGCCACATGTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR GCA 90 bp CTTCCCTGGCTACACATCCCTTCTGCTTCAAACGAAAGAAATGGAGTGAGCAGGGGAGAATCAATGTTCTaGTGGTATTCCTTGACGGGG +
Preference number: 4 (lower is better)
Translates to: LPWLHIPSASNERNGVSRGESMF*WYSLTG
Trigger: CCCCGTCAAGGAATACCAGCAGAACATTGATTCTCC...CCTGCTCACTCCATTTCTTTCGTTTGAAGCAGAAGGGATGTGTAGCCAGGGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR GCA 90 bp GAAGGGAGCCTTCCCTGGCTACACATCCCTTCTGCTTCAAACGAAAGAAATGGAGACTGGTCAGCAGGTTaGTGTAGAGTTTGGGAGAAT +
Preference number: 4 (lower is better)
Translates to: EGSLPWLHIPSASNERNGDWSAG*CRVWEN
Trigger: ATTCTCCCAAACTCTACAGCAACCTGCTGACCAGTC...TCCATTTCTTTCGTTTGAAGCAGAAGGGATGTGTAGCCAGGGAAGGCTCCCTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR GCA 90 bp CTACATGTGGCAAGTTCTGGTGTTACCAAAGTGACAGAGTTTCTTTGGCTACTTTGGCTCTTCATGGCCTaGAGGGTCTTCTGGTGGAGG +
Preference number: 4 (lower is better)
Translates to: LHVASSGVTKVTEFLWLLWLFMA*RVFWWR
Trigger: CCTCCACCAGAAGACCCTGCAGGCCATGAAGAGCCA...AAGTAGCCAAAGAAACTCTGTCACTTTGGTAACACCAGAACTTGCCACATGTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR GCA 90 bp CCTTCTGCTTCAAACGAAAGAAATGGAGTGAGCAGGACCTCCCTTCGTTTCCGGCTGACAGATGTGGTTTaGGGAACAAAGGAAGGCTTT +
Preference number: 4 (lower is better)
Translates to: PSASNERNGVSRTSLRFRLTDVV*GTKEGF
Trigger: AAAGCCTTCCTTTGTTCCGCAAACCACATCTGTCAG...CCGGAAACGAAGGGAGGTCCTGCTCACTCCATTTCTTTCGTTTGAAGCAGAAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR GCA 90 bp GTGAGCAGGACCTCCCTTCGTTTCCGGCAAGTACACAGAAGCCTTGCTGTAGTAAATTTCTGGGCTACTTaGCACAGTGGTAACAGAAGA +
Preference number: 4 (lower is better)
Translates to: VSRTSLRFRQVHRSLAVVNFWAT*HSGNRR
Trigger: TCTTCTGTTACCACTGTGGCAAGTAGCCCAGAAATT...TACTACAGCAAGGCTTCTGTGTACTTGCCGGAAACGAAGGGAGGTCCTGCTCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000077847.12
ENSMUST00000103239.10
ENSMUST00000103240.9
CDS-3UTR GCA 90 bp AGTGAGCAGGACCTCCCTTCGTTTCCGGCAAGTACACAGAAGCCTTGCTGTAGTAATTTCTGGGCTACTTaGCACAGTGGTAACAGAAGA +
Preference number: 4 (lower is better)
Translates to: SEQDLPSFPASTQKPCCSNFWAT*HSGNRR
Trigger: TCTTCTGTTACCACTGTGGCAAGTAGCCCAGAAATT...ACTACAGCAAGGCTTCTGTGTACTTGCCGGAAACGAAGGGAGGTCCTGCTCACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000077847.12
ENSMUST00000103239.10
ENSMUST00000103240.9
CDS-3UTR CCA 90 bp AGTGAGCAGGACCTCCCTTCGTTTCCGGCAAGTACACAGAAGCCTTGCTGTAGTGGAAATCAGCCACTGTaGCAGAATAGAGTTTTCCAT +
Preference number: 4 (lower is better)
Translates to: SEQDLPSFPASTQKPCCSGNQPL*QNRVFH
Trigger: ATGGAAAACTCTATTCTGCCACAGTGGCTGATTTCC...ACTACAGCAAGGCTTCTGTGTACTTGCCGGAAACGAAGGGAGGTCCTGCTCACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CCA 90 bp GTGAGCAGGACCTCCCTTCGTTTCCGGCAAGTACACAGAAGCCTTGCTGTAGTAGGAAATCAGCCACTGTaGCAGAATAGAGTTTTCCAT +
Preference number: 4 (lower is better)
Translates to: VSRTSLRFRQVHRSLAVVGNQPL*QNRVFH
Trigger: ATGGAAAACTCTATTCTGCCACAGTGGCTGATTTCC...TACTACAGCAAGGCTTCTGTGTACTTGCCGGAAACGAAGGGAGGTCCTGCTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CCA 90 bp GAAGGGAGCCTTCCCTGGCTACACATCCCTTCTGCTTCAAACGAAAGAAATGGAGAATCAATGTTCTGCTaGTATTCCTTGACGGGGCTG +
Preference number: 4 (lower is better)
Translates to: EGSLPWLHIPSASNERNGESMFC*YSLTGL
Trigger: CAGCCCCGTCAAGGAATACCAGCAGAACATTGATTC...TCCATTTCTTTCGTTTGAAGCAGAAGGGATGTGTAGCCAGGGAAGGCTCCCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CCA 90 bp ACACAGAAGCCTTGCTGTAGTAGCTACATGTGGCAAGTTCTGGTGTTACCAAAGGCAGTTCCTTCCGACTaGTCAGCAGGTTGCTGTAGA +
Preference number: 4 (lower is better)
Translates to: TQKPCCSSYMWQVLVLPKAVPSD*SAGCCR
Trigger: TCTACAGCAACCTGCTGACCAGTCGGAAGGAACTGC...CTTTGGTAACACCAGAACTTGCCACATGTAGCTACTACAGCAAGGCTTCTGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CCA 90 bp CTACATGTGGCAAGTTCTGGTGTTACCAAAGTGACAGAGTTTCTTTGGCTACTTTGGGCCTTCTCAGAGTaGCTCTTCATGGCCTGCAGG +
Preference number: 4 (lower is better)
Translates to: LHVASSGVTKVTEFLWLLWAFSE*LFMACR
Trigger: CCTGCAGGCCATGAAGAGCCACTCTGAGAAGGCCCA...AAGTAGCCAAAGAAACTCTGTCACTTTGGTAACACCAGAACTTGCCACATGTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CCA 90 bp GCTACATGTGGCAAGTTCTGGTGTTACCAAAGTGACAGAGTTTCTTTGGCTACTATGCCCGTGACTCAATaGGGAATGGGGTGGAGGACT +
Preference number: 4 (lower is better)
Translates to: ATCGKFWCYQSDRVSLATMPVTQ*GMGWRT
Trigger: AGTCCTCCACCCCATTCCCCATTGAGTCACGGGCAT...AGTAGCCAAAGAAACTCTGTCACTTTGGTAACACCAGAACTTGCCACATGTAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CCA 90 bp ACACAGAAGCCTTGCTGTAGTAGCTACATGTGGCAAGTTCTGGTGTTACCAAAGGAAGAACGATGGCACTaGGGATATGCCCGTGACTCA +
Preference number: 4 (lower is better)
Translates to: TQKPCCSSYMWQVLVLPKEERWH*GYARDS
Trigger: TGAGTCACGGGCATATCCCCAGTGCCATCGTTCTTC...CTTTGGTAACACCAGAACTTGCCACATGTAGCTACTACAGCAAGGCTTCTGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CCA 90 bp ACACAGAAGCCTTGCTGTAGTAGCTACATGTGGCAAGTTCTGGTGTTACCAAAGCGTTTGGAAGAACGATaGCACTGGGGATATGCCCGT +
Preference number: 4 (lower is better)
Translates to: TQKPCCSSYMWQVLVLPKRLEER*HWGYAR
Trigger: ACGGGCATATCCCCAGTGCCATCGTTCTTCCAAACG...CTTTGGTAACACCAGAACTTGCCACATGTAGCTACTACAGCAAGGCTTCTGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CCA 90 bp GTGAGCAGGACCTCCCTTCGTTTCCGGCAAGTACACAGAAGCCTTGCTGTAGTATGTGGGCATTCGAGTTaGAGAAGGATGTATTGTAGT +
Preference number: 4 (lower is better)
Translates to: VSRTSLRFRQVHRSLAVVCGHSS*RRMYCS
Trigger: ACTACAATACATCCTTCTCCAACTCGAATGCCCACA...TACTACAGCAAGGCTTCTGTGTACTTGCCGGAAACGAAGGGAGGTCCTGCTCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CCA 90 bp CCTTCTGCTTCAAACGAAAGAAATGGAGTGAGCAGGACCTCCCTTCGTTTCCGGTTCTTTTCGGCTTTGTaGGCATTCGAGTTGGAGAAG +
Preference number: 4 (lower is better)
Translates to: PSASNERNGVSRTSLRFRFFSAL*AFELEK
Trigger: CTTCTCCAACTCGAATGCCCACAAAGCCGAAAAGAA...CCGGAAACGAAGGGAGGTCCTGCTCACTCCATTTCTTTCGTTTGAAGCAGAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CCA 90 bp CATCCCTTCTGCTTCAAACGAAAGAAATGGAGTGAGCAGGACCTCCCTTCGTTTGGATCTCTCCCAGGATaGCTTTGGGGTTACTGTTTG +
Preference number: 4 (lower is better)
Translates to: HPFCFKRKKWSEQDLPSFGSLPG*LWGYCL
Trigger: CAAACAGTAACCCCAAAGCCATCCTGGGAGAGATCC...AAACGAAGGGAGGTCCTGCTCACTCCATTTCTTTCGTTTGAAGCAGAAGGGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CCA 90 bp GCTACATGTGGCAAGTTCTGGTGTTACCAAAGTGACAGAGTTTCTTTGGCTACTTGGTTGGACTATTTCTaGGGAGTGTGGAGGGAGGGG +
Preference number: 4 (lower is better)
Translates to: ATCGKFWCYQSDRVSLATWLDYF*GVWREG
Trigger: CCCCTCCCTCCACACTCCCCAGAAATAGTCCAACCA...AGTAGCCAAAGAAACTCTGTCACTTTGGTAACACCAGAACTTGCCACATGTAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CCA 90 bp CATGTGGCAAGTTCTGGTGTTACCAAAGTGACAGAGTTTCTTTGGCTACTTGTTGCACCCCAGGAGTGGTaGGGACATCTACTCTCTTGG +
Preference number: 4 (lower is better)
Translates to: HVASSGVTKVTEFLWLLVAPQEW*GHLLSW
Trigger: CCAAGAGAGTAGATGTCCCCACCACTCCTGGGGTGC...AACAAGTAGCCAAAGAAACTCTGTCACTTTGGTAACACCAGAACTTGCCACATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CCA 90 bp GCTACATGTGGCAAGTTCTGGTGTTACCAAAGTGACAGAGTTTCTTTGGCTACTTTGGCACCCCAGGAGTaGTGGGGACATCTACTCTCT +
Preference number: 4 (lower is better)
Translates to: ATCGKFWCYQSDRVSLATLAPQE*WGHLLS
Trigger: AGAGAGTAGATGTCCCCACCACTCCTGGGGTGCCAA...AGTAGCCAAAGAAACTCTGTCACTTTGGTAACACCAGAACTTGCCACATGTAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CCA 90 bp GTACACAGAAGCCTTGCTGTAGTAGCTACATGTGGCAAGTTCTGGTGTTACCAAGGAGGGTGCCATTACTaGTATAGCTGCTCTGTCTGG +
Preference number: 4 (lower is better)
Translates to: VHRSLAVVATCGKFWCYQGGCHY*YSCSVW
Trigger: CCAGACAGAGCAGCTATACCAGTAATGGCACCCTCC...TTGGTAACACCAGAACTTGCCACATGTAGCTACTACAGCAAGGCTTCTGTGTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CCA 90 bp GCTACATGTGGCAAGTTCTGGTGTTACCAAAGTGACAGAGTTTCTTTGGCTACTTCTTTAGTCCCGTCCTaGGGAGGGTGCCATTACTGG +
Preference number: 4 (lower is better)
Translates to: ATCGKFWCYQSDRVSLATSLVPS*GGCHYW
Trigger: CCAGTAATGGCACCCTCCCCAGGACGGGACTAAAGA...AGTAGCCAAAGAAACTCTGTCACTTTGGTAACACCAGAACTTGCCACATGTAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR TCA 90 bp CATCCCTTCTGCTTCAAACGAAAGAAATGGAGTGAGCAGGACCTCCCTTCGTTTATTTTCAACATCAGCTaGAAGTCCAGCCTGTGCTGC +
Preference number: 4 (lower is better)
Translates to: HPFCFKRKKWSEQDLPSFIFNIS*KSSLCC
Trigger: GCAGCACAGGCTGGACTTTCAGCTGATGTTGAAAAT...AAACGAAGGGAGGTCCTGCTCACTCCATTTCTTTCGTTTGAAGCAGAAGGGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR TCA 90 bp CATCCCTTCTGCTTCAAACGAAAGAAATGGAGTGAGCAGGACCTCCCTTCGTTTATCTGCACATCGGGTTaGAAGCATTGGTACCACAGA +
Preference number: 4 (lower is better)
Translates to: HPFCFKRKKWSEQDLPSFICTSG*KHWYHR
Trigger: TCTGTGGTACCAATGCTTTCAACCCGATGTGCAGAT...AAACGAAGGGAGGTCCTGCTCACTCCATTTCTTTCGTTTGAAGCAGAAGGGATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR TCA 90 bp GTACACAGAAGCCTTGCTGTAGTAGCTACATGTGGCAAGTTCTGGTGTTACCAACCATGCTTCTGTAAATaGCAGCATCACTGGCCAGGA +
Preference number: 4 (lower is better)
Translates to: VHRSLAVVATCGKFWCYQPCFCK*QHHWPG
Trigger: TCCTGGCCAGTGATGCTGTCATTTACAGAAGCATGG...TTGGTAACACCAGAACTTGCCACATGTAGCTACTACAGCAAGGCTTCTGTGTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR TCA 90 bp CCTTCTGCTTCAAACGAAAGAAATGGAGTGAGCAGGACCTCCCTTCGTTTCCGGCCATATTCTATGGCATaGAGGAAGTGTGGTTCTTTG +
Preference number: 4 (lower is better)
Translates to: PSASNERNGVSRTSLRFRPYSMA*RKCGSL
Trigger: CAAAGAACCACACTTCCTTCATGCCATAGAATATGG...CCGGAAACGAAGGGAGGTCCTGCTCACTCCATTTCTTTCGTTTGAAGCAGAAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR TCA 90 bp AGTACTGTATCAGCTCTTTACACTGGTGAAGGGAGCCTTCCCTGGCTACACATCGCTTCAGGAGATCATTaGGAGTATTCCTGGAATCCA +
Preference number: 4 (lower is better)
Translates to: STVSALYTGEGSLPWLHIASGDH*EYSWNP
Trigger: TGGATTCCAGGAATACTCTCAATGATCTCCTGAAGC...GATGTGTAGCCAGGGAAGGCTCCCTTCACCAGTGTAAAGAGCTGATACAGTACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR TCA 90 bp CTTCCCTGGCTACACATCCCTTCTGCTTCAAACGAAAGAAATGGAGTGAGCAGGGCTTCAGGAGATCATTaGGAGTATTCCTGGAATCCA +
Preference number: 4 (lower is better)
Translates to: LPWLHIPSASNERNGVSRASGDH*EYSWNP
Trigger: TGGATTCCAGGAATACTCTCAATGATCTCCTGAAGC...CCTGCTCACTCCATTTCTTTCGTTTGAAGCAGAAGGGATGTGTAGCCAGGGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR TCA 90 bp CCTTCTGCTTCAAACGAAAGAAATGGAGTGAGCAGGACCTCCCTTCGTTTCCGGGTATTTGGGTCATCTTaGACTACAAATTTCCGGGAG +
Preference number: 4 (lower is better)
Translates to: PSASNERNGVSRTSLRFRVFGSS*TTNFRE
Trigger: CTCCCGGAAATTTGTAGTTCAAGATGACCCAAATAC...CCGGAAACGAAGGGAGGTCCTGCTCACTCCATTTCTTTCGTTTGAAGCAGAAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000077847.12
ENSMUST00000103239.10
ENSMUST00000103240.9
CDS-3UTR GCA 90 bp CTACATGTGGCAAGTTCTGGTGTTACCAAAGTGACAGAGTTTCTTTGGCTACTTAAGTCCAGCCTGTGCTaGGATTCGTTGCCTGAAGGG +
Preference number: 4 (lower is better)
Translates to: LHVASSGVTKVTEFLWLLKSSLC*DSLPEG
Trigger: CCCTTCAGGCAACGAATCGCAGCACAGGCTGGACTT...AAGTAGCCAAAGAAACTCTGTCACTTTGGTAACACCAGAACTTGCCACATGTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR GCA 90 bp ACACAGAAGCCTTGCTGTAGTAGCTACATGTGGCAAGTTCTGGTGTTACCAAAGCAATTTTCTCGATCCTaGTGTCTGGACCTCCACGTC +
Preference number: 4 (lower is better)
Translates to: TQKPCCSSYMWQVLVLPKQFSRS*CLDLHV
Trigger: GACGTGGAGGTCCAGACAGCAGGATCGAGAAAATTG...CTTTGGTAACACCAGAACTTGCCACATGTAGCTACTACAGCAAGGCTTCTGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR GCA 90 bp GTACCCTCACAGCTTCCTCGCAACAGCAGGGACAGGATAAAGCCACACGGGAATTGGCATTCATCTTTATaGTTGCCTTTCATAGCACAA +
Preference number: 4 (lower is better)
Translates to: VPSQLPRNSRDRIKPHGNWHSSL*LPFIAQ
Trigger: TTGTGCTATGAAAGGCAAGCATAAAGATGAATGCCA...ATTCCCGTGTGGCTTTATCCTGTCCCTGCTGTTGCGAGGAAGCTGTGAGGGTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR GCA 90 bp GTGAGCAGGACCTCCCTTCGTTTCCGGCAAGTACACAGAAGCCTTGCTGTAGTAAATCGTATTTTATTGTaGGAAGGGCAGATCCATCTC +
Preference number: 4 (lower is better)
Translates to: VSRTSLRFRQVHRSLAVVNRILL*EGQIHL
Trigger: GAGATGGATCTGCCCTTCGCACAATAAAATACGATT...TACTACAGCAAGGCTTCTGTGTACTTGCCGGAAACGAAGGGAGGTCCTGCTCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR GCA 90 bp CTTCCCTGGCTACACATCCCTTCTGCTTCAAACGAAAGAAATGGAGTGAGCAGGTGTCGTTTTTACAAATaGGAGCCACGCGGGAATACA +
Preference number: 4 (lower is better)
Translates to: LPWLHIPSASNERNGVSRCRFYK*EPRGNT
Trigger: TGTATTCCCGCGTGGCTCGCATTTGTAAAAACGACA...CCTGCTCACTCCATTTCTTTCGTTTGAAGCAGAAGGGATGTGTAGCCAGGGAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR GCA 90 bp GTACACAGAAGCCTTGCTGTAGTAGCTACATGTGGCAAGTTCTGGTGTTACCAAGAGTCTGGGGTTTTCTaGTCTTTGAACCGCCCTTTG +
Preference number: 4 (lower is better)
Translates to: VHRSLAVVATCGKFWCYQESGVF*SLNRPL
Trigger: CAAAGGGCGGTTCAAAGAGCAGAAAACCCCAGACTC...TTGGTAACACCAGAACTTGCCACATGTAGCTACTACAGCAAGGCTTCTGTGTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR GCA 90 bp CATCCCTTCTGCTTCAAACGAAAGAAATGGAGTGAGCAGGACCTCCCTTCGTTTGGAGAATCAATGTTCTaGTGGTATTCCTTGACGGGG +
Preference number: 4 (lower is better)
Translates to: HPFCFKRKKWSEQDLPSFGESMF*WYSLTG
Trigger: CCCCGTCAAGGAATACCAGCAGAACATTGATTCTCC...AAACGAAGGGAGGTCCTGCTCACTCCATTTCTTTCGTTTGAAGCAGAAGGGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR GCA 90 bp CACAGAATGGCAGTCTACATTGAACCCATTTTCAAGTATTTGTTCAGTCTTCTGTCCACAGACCGCCGGTaGTCCCGCTTACTGGATGAC +
Preference number: 4 (lower is better)
Translates to: HRMAVYIEPIFKYLFSLLSTDRR*SRLLDD
Trigger: GTCATCCAGTAAGCGGGAGCACCGGCGGTCTGTGGA...CAGAAGACTGAACAAATACTTGAAAATGGGTTCAATGTAGACTGCCATTCTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR GCA 90 bp GAAGGGAGCCTTCCCTGGCTACACATCCCTTCTGCTTCAAACGAAAGAAATGGACTGACAGATGTGGTTTaGGGAACAAAGGAAGGCTTT +
Preference number: 4 (lower is better)
Translates to: EGSLPWLHIPSASNERNGLTDVV*GTKEGF
Trigger: AAAGCCTTCCTTTGTTCCGCAAACCACATCTGTCAG...TCCATTTCTTTCGTTTGAAGCAGAAGGGATGTGTAGCCAGGGAAGGCTCCCTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CCA 90 bp AATGGAGTGAGCAGGACCTCCCTTCGTTTCCGGCAAGTACACAGAAGCCTTGCTGGTATCACCTCTGTTTaGGGGATTTCATTTAAGTTC +
Preference number: 4 (lower is better)
Translates to: NGVSRTSLRFRQVHRSLAGITSV*GISFKF
Trigger: GAACTTAAATGAAATCCCCCAAACAGAGGTGATACC...AGCAAGGCTTCTGTGTACTTGCCGGAAACGAAGGGAGGTCCTGCTCACTCCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CCA 90 bp CTGGCTACACATCCCTTCTGCTTCAAACGAAAGAAATGGAGTGAGCAGGACCTCGGCATGAAGGAAGTGTaGTTCTTTGATCCACTTGGA +
Preference number: 4 (lower is better)
Translates to: LATHPFCFKRKKWSEQDLGMKEV*FFDPLG
Trigger: TCCAAGTGGATCAAAGAACCACACTTCCTTCATGCC...GAGGTCCTGCTCACTCCATTTCTTTCGTTTGAAGCAGAAGGGATGTGTAGCCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CCA 90 bp GGAATGTTTATCATGGCAAGGGTGGGTGCTGCTTCTGATCCTGGAGGGAAGGGGAGTTTCCATATTCTATaGCATGAAGGAAGTGTGGTT +
Preference number: 4 (lower is better)
Translates to: GMFIMARVGAASDPGGKGSFHIL*HEGSVV
Trigger: AACCACACTTCCTTCATGCCATAGAATATGGAAACT...CCCCTTCCCTCCAGGATCAGAAGCAGCACCCACCCTTGCCATGATAAACATTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103241.8
CDS-3UTR CCA 90 bp ATCCTGGAGGGAAGGGGCGGCGTTGCTCAACAACAAATCGCTCTAGGTGGCTTTAGTTTCCATATTCTATaGCATGAAGGAAGTGTGGTT +
Preference number: 4 (lower is better)
Translates to: ILEGRGGVAQQQIALGGFSFHIL*HEGSVV
Trigger: AACCACACTTCCTTCATGCCATAGAATATGGAAACT...AAAGCCACCTAGAGCGATTTGTTGTTGAGCAACGCCGCCCCTTCCCTCCAGGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103241.8
CDS-3UTR CCA 90 bp CACAGAATGGCAGTCTACATTGAACCCATTTTCAAGTATTTGTTCAGTCTTCTGAGGGCTCATCGGCAATaGGTGGGACGGCAGAGTCCA +
Preference number: 4 (lower is better)
Translates to: HRMAVYIEPIFKYLFSLLRAHRQ*VGRQSP
Trigger: TGGACTCTGCCGTCCCACCCATTGCCGATGAGCCCT...CAGAAGACTGAACAAATACTTGAAAATGGGTTCAATGTAGACTGCCATTCTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CCA 90 bp GCAAACAACATTGTTGGTGGCAGATGTGTAGTGCTTATTGTTGGTTGGTTTAATTGGCAGTCCCCTAGGTaGGCTGTGTTGCCGTACTCC +
Preference number: 4 (lower is better)
Translates to: ANNIVGGRCVVLIVGWFNWQSPR*AVLPYS
Trigger: GGAGTACGGCAACACAGCCCACCTAGGGGACTGCCA...ATTAAACCAACCAACAATAAGCACTACACATCTGCCACCAACAATGTTGTTTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103241.8
CDS-3UTR CCA 90 bp GCTACATGTGGCAAGTTCTGGTGTTACCAAAGTGACAGAGTTTCTTTGGCTACTTTGGATTCTCCAGACTaGACTTCCCACCGTACACCG +
Preference number: 4 (lower is better)
Translates to: ATCGKFWCYQSDRVSLATLDSPD*TSHRTP
Trigger: CGGTGTACGGTGGGAAGTCCAGTCTGGAGAATCCAA...AGTAGCCAAAGAAACTCTGTCACTTTGGTAACACCAGAACTTGCCACATGTAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000103241.8
CDS-3UTR CCA 90 bp CCCCCAAGTAATGCAGACCATGGTCACTGTCCCAAGATATCACTTGAACTCCGCGGTTGCTGTAGAGTTTaGGAGAATCAATGTTCTGCT +
Preference number: 4 (lower is better)
Translates to: PPSNADHGHCPKISLELRGCCRV*ENQCSA
Trigger: AGCAGAACATTGATTCTCCCAAACTCTACAGCAACC...GCGGAGTTCAAGTGATATCTTGGGACAGTGACCATGGTCTGCATTACTTGGGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103241.8
CDS-3UTR CCA 90 bp GCTACATGTGGCAAGTTCTGGTGTTACCAAAGTGACAGAGTTTCTTTGGCTACTGCAGTTCCTTCCGACTaGTCAGCAGGTTGCTGTAGA +
Preference number: 4 (lower is better)
Translates to: ATCGKFWCYQSDRVSLATAVPSD*SAGCCR
Trigger: TCTACAGCAACCTGCTGACCAGTCGGAAGGAACTGC...AGTAGCCAAAGAAACTCTGTCACTTTGGTAACACCAGAACTTGCCACATGTAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CCA 90 bp CACAGAATGGCAGTCTACATTGAACCCATTTTCAAGTATTTGTTCAGTCTTCTGGAAGCACCGTGGCTGTaGGCCTTCTCAGAGTGGCTC +
Preference number: 4 (lower is better)
Translates to: HRMAVYIEPIFKYLFSLLEAPWL*AFSEWL
Trigger: GAGCCACTCTGAGAAGGCCCACAGCCACGGTGCTTC...CAGAAGACTGAACAAATACTTGAAAATGGGTTCAATGTAGACTGCCATTCTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CCA 90 bp GTGGCAAGTTCTGGTGTTACCAAAGTGACAGAGTTTCTTTGGCTACTTGTTTCTTTCCTTGAAGCACCGTaGCTGTGGGCCTTCTCAGAG +
Preference number: 4 (lower is better)
Translates to: VASSGVTKVTEFLWLLVSFLEAP*LWAFSE
Trigger: CTCTGAGAAGGCCCACAGCCACGGTGCTTCAAGGAA...AGAAACAAGTAGCCAAAGAAACTCTGTCACTTTGGTAACACCAGAACTTGCCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CCA 90 bp GTGGCAAGTTCTGGTGTTACCAAAGTGACAGAGTTTCTTTGGCTACTTGTTTCTGTCGTGAGTGGCGTTTaGAAGAACGATGGCACTGGG +
Preference number: 4 (lower is better)
Translates to: VASSGVTKVTEFLWLLVSVVSGV*KNDGTG
Trigger: CCCAGTGCCATCGTTCTTCCAAACGCCACTCACGAC...AGAAACAAGTAGCCAAAGAAACTCTGTCACTTTGGTAACACCAGAACTTGCCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CCA 90 bp CTACATGTGGCAAGTTCTGGTGTTACCAAAGTGACAGAGTTTCTTTGGCTACTTGTCGTGAGTGGCGTTTaGAAGAACGATGGCACTGGG +
Preference number: 4 (lower is better)
Translates to: LHVASSGVTKVTEFLWLLVVSGV*KNDGTG
Trigger: CCCAGTGCCATCGTTCTTCCAAACGCCACTCACGAC...AAGTAGCCAAAGAAACTCTGTCACTTTGGTAACACCAGAACTTGCCACATGTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CCA 90 bp CATGTGGCAAGTTCTGGTGTTACCAAAGTGACAGAGTTTCTTTGGCTACTTGTTGTCGTGAGTGGCGTTTaGAAGAACGATGGCACTGGG +
Preference number: 4 (lower is better)
Translates to: HVASSGVTKVTEFLWLLVVVSGV*KNDGTG
Trigger: CCCAGTGCCATCGTTCTTCCAAACGCCACTCACGAC...AACAAGTAGCCAAAGAAACTCTGTCACTTTGGTAACACCAGAACTTGCCACATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CCA 90 bp AGTACTGTATCAGCTCTTTACACTGGTGAAGGGAGCCTTCCCTGGCTACACATCTATTGTAGTCGTGAGTaGCGTTTGGAAGAACGATGG +
Preference number: 4 (lower is better)
Translates to: STVSALYTGEGSLPWLHIYCSRE*RLEERW
Trigger: CCATCGTTCTTCCAAACGCCACTCACGACTACAATA...GATGTGTAGCCAGGGAAGGCTCCCTTCACCAGTGTAAAGAGCTGATACAGTACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CCA 90 bp CCTTCTGCTTCAAACGAAAGAAATGGAGTGAGCAGGACCTCCCTTCGTTTCCGGTGTGGGCATTCGAGTTaGAGAAGGATGTATTGTAGT +
Preference number: 4 (lower is better)
Translates to: PSASNERNGVSRTSLRFRCGHSS*RRMYCS
Trigger: ACTACAATACATCCTTCTCCAACTCGAATGCCCACA...CCGGAAACGAAGGGAGGTCCTGCTCACTCCATTTCTTTCGTTTGAAGCAGAAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CCA 90 bp CTGGCTACACATCCCTTCTGCTTCAAACGAAAGAAATGGAGTGAGCAGGACCTCTTCTTTTCGGCTTTGTaGGCATTCGAGTTGGAGAAG +
Preference number: 4 (lower is better)
Translates to: LATHPFCFKRKKWSEQDLFFSAL*AFELEK
Trigger: CTTCTCCAACTCGAATGCCCACAAAGCCGAAAAGAA...GAGGTCCTGCTCACTCCATTTCTTTCGTTTGAAGCAGAAGGGATGTGTAGCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CCA 90 bp CTTCCCTGGCTACACATCCCTTCTGCTTCAAACGAAAGAAATGGAGTGAGCAGGTTCTTTTCGGCTTTGTaGGCATTCGAGTTGGAGAAG +
Preference number: 4 (lower is better)
Translates to: LPWLHIPSASNERNGVSRFFSAL*AFELEK
Trigger: CTTCTCCAACTCGAATGCCCACAAAGCCGAAAAGAA...CCTGCTCACTCCATTTCTTTCGTTTGAAGCAGAAGGGATGTGTAGCCAGGGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CCA 90 bp GTACACAGAAGCCTTGCTGTAGTAGCTACATGTGGCAAGTTCTGGTGTTACCAAGGATCTCTCCCAGGATaGCTTTGGGGTTACTGTTTG +
Preference number: 4 (lower is better)
Translates to: VHRSLAVVATCGKFWCYQGSLPG*LWGYCL
Trigger: CAAACAGTAACCCCAAAGCCATCCTGGGAGAGATCC...TTGGTAACACCAGAACTTGCCACATGTAGCTACTACAGCAAGGCTTCTGTGTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CCA 90 bp CATGTGGCAAGTTCTGGTGTTACCAAAGTGACAGAGTTTCTTTGGCTACTTGTTTGGTTGGACTATTTCTaGGGAGTGTGGAGGGAGGGG +
Preference number: 4 (lower is better)
Translates to: HVASSGVTKVTEFLWLLVWLDYF*GVWREG
Trigger: CCCCTCCCTCCACACTCCCCAGAAATAGTCCAACCA...AACAAGTAGCCAAAGAAACTCTGTCACTTTGGTAACACCAGAACTTGCCACATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CCA 90 bp GAAGGGAGCCTTCCCTGGCTACACATCCCTTCTGCTTCAAACGAAAGAAATGGAGGACATCTACTCTCTTaGTTGGACTATTTCTGGGGA +
Preference number: 4 (lower is better)
Translates to: EGSLPWLHIPSASNERNGGHLLS*LDYFWG
Trigger: TCCCCAGAAATAGTCCAACCAAGAGAGTAGATGTCC...TCCATTTCTTTCGTTTGAAGCAGAAGGGATGTGTAGCCAGGGAAGGCTCCCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CCA 90 bp GCAAACAACATTGTTGGTGGCAGATGTGTAGTGCTTATTGTTGGTTGGTTTAATCACCTTCGCCCCTGTTaGGGTGGGCATATAGCCTCC +
Preference number: 4 (lower is better)
Translates to: ANNIVGGRCVVLIVGWFNHLRPC*GGHIAS
Trigger: GGAGGCTATATGCCCACCCCAACAGGGGCGAAGGTG...ATTAAACCAACCAACAATAAGCACTACACATCTGCCACCAACAATGTTGTTTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103241.8
CDS-3UTR CCA 90 bp GCTACATGTGGCAAGTTCTGGTGTTACCAAAGTGACAGAGTTTCTTTGGCTACTGGAGGGTGCCATTACTaGTATAGCTGCTCTGTCTGG +
Preference number: 4 (lower is better)
Translates to: ATCGKFWCYQSDRVSLATGGCHY*YSCSVW
Trigger: CCAGACAGAGCAGCTATACCAGTAATGGCACCCTCC...AGTAGCCAAAGAAACTCTGTCACTTTGGTAACACCAGAACTTGCCACATGTAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR TCA 90 bp CTACATGTGGCAAGTTCTGGTGTTACCAAAGTGACAGAGTTTCTTTGGCTACTTCTGCGATTCGTTGCCTaGAGGGCGTCCTCTAAAAAC +
Preference number: 4 (lower is better)
Translates to: LHVASSGVTKVTEFLWLLLRFVA*RASSKN
Trigger: GTTTTTAGAGGACGCCCTTCAGGCAACGAATCGCAG...AAGTAGCCAAAGAAACTCTGTCACTTTGGTAACACCAGAACTTGCCACATGTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR TCA 90 bp GTACACAGAAGCCTTGCTGTAGTAGCTACATGTGGCAAGTTCTGGTGTTACCAAATCTGCACATCGGGTTaGAAGCATTGGTACCACAGA +
Preference number: 4 (lower is better)
Translates to: VHRSLAVVATCGKFWCYQICTSG*KHWYHR
Trigger: TCTGTGGTACCAATGCTTTCAACCCGATGTGCAGAT...TTGGTAACACCAGAACTTGCCACATGTAGCTACTACAGCAAGGCTTCTGTGTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR TCA 90 bp ACACAGAAGCCTTGCTGTAGTAGCTACATGTGGCAAGTTCTGGTGTTACCAAAGATCTGCACATCGGGTTaGAAGCATTGGTACCACAGA +
Preference number: 4 (lower is better)
Translates to: TQKPCCSSYMWQVLVLPKICTSG*KHWYHR
Trigger: TCTGTGGTACCAATGCTTTCAACCCGATGTGCAGAT...CTTTGGTAACACCAGAACTTGCCACATGTAGCTACTACAGCAAGGCTTCTGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR TCA 90 bp CTGGCTACACATCCCTTCTGCTTCAAACGAAAGAAATGGAGTGAGCAGGACCTCCCATATTCTATGGCATaGAGGAAGTGTGGTTCTTTG +
Preference number: 4 (lower is better)
Translates to: LATHPFCFKRKKWSEQDLPYSMA*RKCGSL
Trigger: CAAAGAACCACACTTCCTTCATGCCATAGAATATGG...GAGGTCCTGCTCACTCCATTTCTTTCGTTTGAAGCAGAAGGGATGTGTAGCCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR TCA 90 bp CTTCCCTGGCTACACATCCCTTCTGCTTCAAACGAAAGAAATGGAGTGAGCAGGCCATATTCTATGGCATaGAGGAAGTGTGGTTCTTTG +
Preference number: 4 (lower is better)
Translates to: LPWLHIPSASNERNGVSRPYSMA*RKCGSL
Trigger: CAAAGAACCACACTTCCTTCATGCCATAGAATATGG...CCTGCTCACTCCATTTCTTTCGTTTGAAGCAGAAGGGATGTGTAGCCAGGGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR TCA 90 bp AGTACTGTATCAGCTCTTTACACTGGTGAAGGGAGCCTTCCCTGGCTACACATCCCACGGCGATTTCTCTaGAGAAGAAATAGACATAGT +
Preference number: 4 (lower is better)
Translates to: STVSALYTGEGSLPWLHIPRRFL*RRNRHS
Trigger: ACTATGTCTATTTCTTCTTCAGAGAAATCGCCGTGG...GATGTGTAGCCAGGGAAGGCTCCCTTCACCAGTGTAAAGAGCTGATACAGTACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR TCA 90 bp AGTACTGTATCAGCTCTTTACACTGGTGAAGGGAGCCTTCCCTGGCTACACATCCAGTGGGGATGCCATTaGTTTGGATTATGTCTGTTA +
Preference number: 4 (lower is better)
Translates to: STVSALYTGEGSLPWLHIQWGCH*FGLCLL
Trigger: TAACAGACATAATCCAAATCAATGGCATCCCCACTG...GATGTGTAGCCAGGGAAGGCTCCCTTCACCAGTGTAAAGAGCTGATACAGTACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR TCA 90 bp CTTCCCTGGCTACACATCCCTTCTGCTTCAAACGAAAGAAATGGAGTGAGCAGGCAGAGCCAACAAAGATaGCTGTGTAGTTTTGGTATG +
Preference number: 4 (lower is better)
Translates to: LPWLHIPSASNERNGVSRQSQQR*LCSFGM
Trigger: CATACCAAAACTACACAGTCATCTTTGTTGGCTCTG...CCTGCTCACTCCATTTCTTTCGTTTGAAGCAGAAGGGATGTGTAGCCAGGGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR TCA 90 bp GAAGGGAGCCTTCCCTGGCTACACATCCCTTCTGCTTCAAACGAAAGAAATGGACAGAGCCAACAAAGATaGCTGTGTAGTTTTGGTATG +
Preference number: 4 (lower is better)
Translates to: EGSLPWLHIPSASNERNGQSQQR*LCSFGM
Trigger: CATACCAAAACTACACAGTCATCTTTGTTGGCTCTG...TCCATTTCTTTCGTTTGAAGCAGAAGGGATGTGTAGCCAGGGAAGGCTCCCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR TCA 90 bp GTACACAGAAGCCTTGCTGTAGTAGCTACATGTGGCAAGTTCTGGTGTTACCAATTCATGTGGACCATCTaGTTGGATTCTCCAGACTGG +
Preference number: 4 (lower is better)
Translates to: VHRSLAVVATCGKFWCYQFMWTI*LDSPDW
Trigger: CCAGTCTGGAGAATCCAATCAGATGGTCCACATGAA...TTGGTAACACCAGAACTTGCCACATGTAGCTACTACAGCAAGGCTTCTGTGTAC
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR TCA 90 bp CATCCCTTCTGCTTCAAACGAAAGAAATGGAGTGAGCAGGACCTCCCTTCGTTTGCTTCAGGAGATCATTaGGAGTATTCCTGGAATCCA +
Preference number: 4 (lower is better)
Translates to: HPFCFKRKKWSEQDLPSFASGDH*EYSWNP
Trigger: TGGATTCCAGGAATACTCTCAATGATCTCCTGAAGC...AAACGAAGGGAGGTCCTGCTCACTCCATTTCTTTCGTTTGAAGCAGAAGGGATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR TCA 90 bp ACACAGAAGCCTTGCTGTAGTAGCTACATGTGGCAAGTTCTGGTGTTACCAAAGACTTGTTCAGTGGTCTaGCAGATGTGGTTTGCGGAA +
Preference number: 4 (lower is better)
Translates to: TQKPCCSSYMWQVLVLPKTCSVV*QMWFAE
Trigger: TTCCGCAAACCACATCTGTCAGACCACTGAACAAGT...CTTTGGTAACACCAGAACTTGCCACATGTAGCTACTACAGCAAGGCTTCTGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR GCA 90 bp AGTGAGCAGGACCTCCCTTCGTTTCCGGCAAGTACACAGAAGCCTTGCTGTAGTTGGCATTCATCTTTATaGTTGCCTTTCATAGCACAA +
Preference number: 4 (lower is better)
Translates to: SEQDLPSFPASTQKPCCSWHSSL*LPFIAQ
Trigger: TTGTGCTATGAAAGGCAAGCATAAAGATGAATGCCA...ACTACAGCAAGGCTTCTGTGTACTTGCCGGAAACGAAGGGAGGTCCTGCTCACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR GCA 90 bp CATCCCTTCTGCTTCAAACGAAAGAAATGGAGTGAGCAGGACCTCCCTTCGTTTTGTCGTTTTTACAAATaGGAGCCACGCGGGAATACA +
Preference number: 4 (lower is better)
Translates to: HPFCFKRKKWSEQDLPSFCRFYK*EPRGNT
Trigger: TGTATTCCCGCGTGGCTCGCATTTGTAAAAACGACA...AAACGAAGGGAGGTCCTGCTCACTCCATTTCTTTCGTTTGAAGCAGAAGGGATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR GCA 90 bp GTGGCAAGTTCTGGTGTTACCAAAGTGACAGAGTTTCTTTGGCTACTTGTTTCTGGTCTTGTAAGCTTCTaGGAGGCCGTGTTTGGCACA +
Preference number: 4 (lower is better)
Translates to: VASSGVTKVTEFLWLLVSGLVSF*EAVFGT
Trigger: TGTGCCAAACACGGCCTCGCAGAAGCTTACAAGACC...AGAAACAAGTAGCCAAAGAAACTCTGTCACTTTGGTAACACCAGAACTTGCCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR GCA 90 bp AGTACTGTATCAGCTCTTTACACTGGTGAAGGGAGCCTTCCCTGGCTACACATCGGTCACGTGATGCAATaGAAGACTTTTTACACGATC +
Preference number: 4 (lower is better)
Translates to: STVSALYTGEGSLPWLHIGHVMQ*KTFYTI
Trigger: GATCGTGTAAAAAGTCTTGCATTGCATCACGTGACC...GATGTGTAGCCAGGGAAGGCTCCCTTCACCAGTGTAAAGAGCTGATACAGTACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR GCA 90 bp CACAGAATGGCAGTCTACATTGAACCCATTTTCAAGTATTTGTTCAGTCTTCTGTTCCGCTGGAGTCTGTaGACGACTGGGCGGATTCTG +
Preference number: 4 (lower is better)
Translates to: HRMAVYIEPIFKYLFSLLFRWSL*TTGRIL
Trigger: CAGAATCCGCCCAGTCGTGCACAGACTCCAGCGGAA...CAGAAGACTGAACAAATACTTGAAAATGGGTTCAATGTAGACTGCCATTCTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR GCA 90 bp CATCCCTTCTGCTTCAAACGAAAGAAATGGAGTGAGCAGGACCTCCCTTCGTTTCTGACAGATGTGGTTTaGGGAACAAAGGAAGGCTTT +
Preference number: 4 (lower is better)
Translates to: HPFCFKRKKWSEQDLPSFLTDVV*GTKEGF
Trigger: AAAGCCTTCCTTTGTTCCGCAAACCACATCTGTCAG...AAACGAAGGGAGGTCCTGCTCACTCCATTTCTTTCGTTTGAAGCAGAAGGGATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CCA 90 bp CTGGCTACACATCCCTTCTGCTTCAAACGAAAGAAATGGAGTGAGCAGGACCTCGGAAATCAGCCACTGTaGCAGAATAGAGTTTTCCAT +
Preference number: 4 (lower is better)
Translates to: LATHPFCFKRKKWSEQDLGNQPL*QNRVFH
Trigger: ATGGAAAACTCTATTCTGCCACAGTGGCTGATTTCC...GAGGTCCTGCTCACTCCATTTCTTTCGTTTGAAGCAGAAGGGATGTGTAGCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CCA 90 bp CATCCCTTCTGCTTCAAACGAAAGAAATGGAGTGAGCAGGACCTCCCTTCGTTTGGCATGAAGGAAGTGTaGTTCTTTGATCCACTTGGA +
Preference number: 4 (lower is better)
Translates to: HPFCFKRKKWSEQDLPSFGMKEV*FFDPLG
Trigger: TCCAAGTGGATCAAAGAACCACACTTCCTTCATGCC...AAACGAAGGGAGGTCCTGCTCACTCCATTTCTTTCGTTTGAAGCAGAAGGGATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CCA 90 bp GTGAGCAGGACCTCCCTTCGTTTCCGGCAAGTACACAGAAGCCTTGCTGTAGTAAGTTTCCATATTCTATaGCATGAAGGAAGTGTGGTT +
Preference number: 4 (lower is better)
Translates to: VSRTSLRFRQVHRSLAVVSFHIL*HEGSVV
Trigger: AACCACACTTCCTTCATGCCATAGAATATGGAAACT...TACTACAGCAAGGCTTCTGTGTACTTGCCGGAAACGAAGGGAGGTCCTGCTCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CCA 90 bp GCAAACAACATTGTTGGTGGCAGATGTGTAGTGCTTATTGTTGGTTGGTTTAATCTCATCGGCAATGGGTaGGACGGCAGAGTCCATCAG +
Preference number: 4 (lower is better)
Translates to: ANNIVGGRCVVLIVGWFNLIGNG*DGRVHQ
Trigger: CTGATGGACTCTGCCGTCCCACCCATTGCCGATGAG...ATTAAACCAACCAACAATAAGCACTACACATCTGCCACCAACAATGTTGTTTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103241.8
CDS-3UTR CCA 90 bp CATCCCTTCTGCTTCAAACGAAAGAAATGGAGTGAGCAGGACCTCCCTTCGTTTTGTGGACCATCTGATTaGATTCTCCAGACTGGACTT +
Preference number: 4 (lower is better)
Translates to: HPFCFKRKKWSEQDLPSFCGPSD*ILQTGL
Trigger: AAGTCCAGTCTGGAGAATCCAATCAGATGGTCCACA...AAACGAAGGGAGGTCCTGCTCACTCCATTTCTTTCGTTTGAAGCAGAAGGGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CCA 90 bp CATGTGGCAAGTTCTGGTGTTACCAAAGTGACAGAGTTTCTTTGGCTACTTGTTGAGTCTGTGCACGACTaGGCGGATTCTGCGTCTTTA +
Preference number: 4 (lower is better)
Translates to: HVASSGVTKVTEFLWLLVESVHD*ADSASL
Trigger: TAAAGACGCAGAATCCGCCCAGTCGTGCACAGACTC...AACAAGTAGCCAAAGAAACTCTGTCACTTTGGTAACACCAGAACTTGCCACATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CCA 90 bp CTTCCCTGGCTACACATCCCTTCTGCTTCAAACGAAAGAAATGGAGTGAGCAGGGGTTGCTGTAGAGTTTaGGAGAATCAATGTTCTGCT +
Preference number: 4 (lower is better)
Translates to: LPWLHIPSASNERNGVSRGCCRV*ENQCSA
Trigger: AGCAGAACATTGATTCTCCCAAACTCTACAGCAACC...CCTGCTCACTCCATTTCTTTCGTTTGAAGCAGAAGGGATGTGTAGCCAGGGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CCA 90 bp GAAGGGAGCCTTCCCTGGCTACACATCCCTTCTGCTTCAAACGAAAGAAATGGAGGTTGCTGTAGAGTTTaGGAGAATCAATGTTCTGCT +
Preference number: 4 (lower is better)
Translates to: EGSLPWLHIPSASNERNGGCCRV*ENQCSA
Trigger: AGCAGAACATTGATTCTCCCAAACTCTACAGCAACC...TCCATTTCTTTCGTTTGAAGCAGAAGGGATGTGTAGCCAGGGAAGGCTCCCTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CCA 90 bp CACAGAATGGCAGTCTACATTGAACCCATTTTCAAGTATTTGTTCAGTCTTCTGGCCTGCAGGGTCTTCTaGTGGAGGACAGGTGTGGAT +
Preference number: 4 (lower is better)
Translates to: HRMAVYIEPIFKYLFSLLACRVF*WRTGVD
Trigger: ATCCACACCTGTCCTCCACCAGAAGACCCTGCAGGC...CAGAAGACTGAACAAATACTTGAAAATGGGTTCAATGTAGACTGCCATTCTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CCA 90 bp CTTCCCTGGCTACACATCCCTTCTGCTTCAAACGAAAGAAATGGAGTGAGCAGGATCTACTCTCTTGGTTaGACTATTTCTGGGGAGTGT +
Preference number: 4 (lower is better)
Translates to: LPWLHIPSASNERNGVSRIYSLG*TISGEC
Trigger: ACACTCCCCAGAAATAGTCCAACCAAGAGAGTAGAT...CCTGCTCACTCCATTTCTTTCGTTTGAAGCAGAAGGGATGTGTAGCCAGGGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CCA 90 bp CATCCCTTCTGCTTCAAACGAAAGAAATGGAGTGAGCAGGACCTCCCTTCGTTTGGACATCTACTCTCTTaGTTGGACTATTTCTGGGGA +
Preference number: 4 (lower is better)
Translates to: HPFCFKRKKWSEQDLPSFGHLLS*LDYFWG
Trigger: TCCCCAGAAATAGTCCAACCAAGAGAGTAGATGTCC...AAACGAAGGGAGGTCCTGCTCACTCCATTTCTTTCGTTTGAAGCAGAAGGGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR TCA 90 bp GCTACATGTGGCAAGTTCTGGTGTTACCAAAGTGACAGAGTTTCTTTGGCTACTATTTTCAACATCAGCTaGAAGTCCAGCCTGTGCTGC +
Preference number: 4 (lower is better)
Translates to: ATCGKFWCYQSDRVSLATIFNIS*KSSLCC
Trigger: GCAGCACAGGCTGGACTTTCAGCTGATGTTGAAAAT...AGTAGCCAAAGAAACTCTGTCACTTTGGTAACACCAGAACTTGCCACATGTAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR TCA 90 bp CATGTGGCAAGTTCTGGTGTTACCAAAGTGACAGAGTTTCTTTGGCTACTTGTTCCATGCTTCTGTAAATaGCAGCATCACTGGCCAGGA +
Preference number: 4 (lower is better)
Translates to: HVASSGVTKVTEFLWLLVPCFCK*QHHWPG
Trigger: TCCTGGCCAGTGATGCTGTCATTTACAGAAGCATGG...AACAAGTAGCCAAAGAAACTCTGTCACTTTGGTAACACCAGAACTTGCCACATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR TCA 90 bp CATCCCTTCTGCTTCAAACGAAAGAAATGGAGTGAGCAGGACCTCCCTTCGTTTCAGTGGGGATGCCATTaGTTTGGATTATGTCTGTTA +
Preference number: 4 (lower is better)
Translates to: HPFCFKRKKWSEQDLPSFQWGCH*FGLCLL
Trigger: TAACAGACATAATCCAAATCAATGGCATCCCCACTG...AAACGAAGGGAGGTCCTGCTCACTCCATTTCTTTCGTTTGAAGCAGAAGGGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR TCA 90 bp CACAGAATGGCAGTCTACATTGAACCCATTTTCAAGTATTTGTTCAGTCTTCTGTCTGCTGGTATTCCTTaGCGGGGCTGTCAAAGAGGC +
Preference number: 4 (lower is better)
Translates to: HRMAVYIEPIFKYLFSLLSAGIP*RGCQRG
Trigger: GCCTCTTTGACAGCCCCGTCAAGGAATACCAGCAGA...CAGAAGACTGAACAAATACTTGAAAATGGGTTCAATGTAGACTGCCATTCTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR TCA 90 bp GCTACATGTGGCAAGTTCTGGTGTTACCAAAGTGACAGAGTTTCTTTGGCTACTACTTGTTCAGTGGTCTaGCAGATGTGGTTTGCGGAA +
Preference number: 4 (lower is better)
Translates to: ATCGKFWCYQSDRVSLATTCSVV*QMWFAE
Trigger: TTCCGCAAACCACATCTGTCAGACCACTGAACAAGT...AGTAGCCAAAGAAACTCTGTCACTTTGGTAACACCAGAACTTGCCACATGTAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR TCA 90 bp GTACACAGAAGCCTTGCTGTAGTAGCTACATGTGGCAAGTTCTGGTGTTACCAAGTAATCTGGTGTAGTTaGAGGAGGCAAACTTTCGTG +
Preference number: 4 (lower is better)
Translates to: VHRSLAVVATCGKFWCYQVIWCS*RRQTFV
Trigger: CACGAAAGTTTGCCTCCTTCAACTACACCAGATTAC...TTGGTAACACCAGAACTTGCCACATGTAGCTACTACAGCAAGGCTTCTGTGTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
CDS-3UTR GCA 90 bp CTACATGTGGCAAGTTCTGGTGTTACCAAAGTGACAGAGTTTCTTTGGCTACTTCAATTTTCTCGATCCTaGTGTCTGGACCTCCACGTC +
Preference number: 4 (lower is better)
Translates to: LHVASSGVTKVTEFLWLLQFSRS*CLDLHV
Trigger: GACGTGGAGGTCCAGACAGCAGGATCGAGAAAATTG...AAGTAGCCAAAGAAACTCTGTCACTTTGGTAACACCAGAACTTGCCACATGTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR GCA 90 bp CCCCCAAGTAATGCAGACCATGGTCACTGTCCCAAGATATCACTTGAACTCCGCTGGCATTCATCTTTATaGTTGCCTTTCATAGCACAA +
Preference number: 4 (lower is better)
Translates to: PPSNADHGHCPKISLELRWHSSL*LPFIAQ
Trigger: TTGTGCTATGAAAGGCAAGCATAAAGATGAATGCCA...GCGGAGTTCAAGTGATATCTTGGGACAGTGACCATGGTCTGCATTACTTGGGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103241.8
CDS-3UTR GCA 90 bp CCTTCTGCTTCAAACGAAAGAAATGGAGTGAGCAGGACCTCCCTTCGTTTCCGGTGGCATTCATCTTTATaGTTGCCTTTCATAGCACAA +
Preference number: 4 (lower is better)
Translates to: PSASNERNGVSRTSLRFRWHSSL*LPFIAQ
Trigger: TTGTGCTATGAAAGGCAAGCATAAAGATGAATGCCA...CCGGAAACGAAGGGAGGTCCTGCTCACTCCATTTCTTTCGTTTGAAGCAGAAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR GCA 90 bp GCTACATGTGGCAAGTTCTGGTGTTACCAAAGTGACAGAGTTTCTTTGGCTACTATCAAACGGGCATCGTaGCAGGCCACTAATTTCTTC +
Preference number: 4 (lower is better)
Translates to: ATCGKFWCYQSDRVSLATIKRAS*QATNFF
Trigger: GAAGAAATTAGTGGCCTGGCACGATGCCCGTTTGAT...AGTAGCCAAAGAAACTCTGTCACTTTGGTAACACCAGAACTTGCCACATGTAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR GCA 90 bp ACACAGAAGCCTTGCTGTAGTAGCTACATGTGGCAAGTTCTGGTGTTACCAAAGTGTCGTTTTTACAAATaGGAGCCACGCGGGAATACA +
Preference number: 4 (lower is better)
Translates to: TQKPCCSSYMWQVLVLPKCRFYK*EPRGNT
Trigger: TGTATTCCCGCGTGGCTCGCATTTGTAAAAACGACA...CTTTGGTAACACCAGAACTTGCCACATGTAGCTACTACAGCAAGGCTTCTGTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR GCA 90 bp GCTACATGTGGCAAGTTCTGGTGTTACCAAAGTGACAGAGTTTCTTTGGCTACTCGACTGGGCGGATTCTaGGTCTTTATGGATCTTTCT +
Preference number: 4 (lower is better)
Translates to: ATCGKFWCYQSDRVSLATRLGGF*VFMDLS
Trigger: AGAAAGATCCATAAAGACGCAGAATCCGCCCAGTCG...AGTAGCCAAAGAAACTCTGTCACTTTGGTAACACCAGAACTTGCCACATGTAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR GCA 90 bp GCTACATGTGGCAAGTTCTGGTGTTACCAAAGTGACAGAGTTTCTTTGGCTACTGACTGGTCAGCAGGTTaGTGTAGAGTTTGGGAGAAT +
Preference number: 4 (lower is better)
Translates to: ATCGKFWCYQSDRVSLATDWSAG*CRVWEN
Trigger: ATTCTCCCAAACTCTACAGCAACCTGCTGACCAGTC...AGTAGCCAAAGAAACTCTGTCACTTTGGTAACACCAGAACTTGCCACATGTAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR GCA 90 bp AAATTGCTACAGTTTGGGTCAAAGATTGAATTTTCAGCAAACTGCTTGGTAATCTCCACAGACCGCCGGTaGTCCCGCTTACTGGATGAC +
Preference number: 4 (lower is better)
Translates to: KLLQFGSKIEFSANCLVISTDRR*SRLLDD
Trigger: GTCATCCAGTAAGCGGGAGCACCGGCGGTCTGTGGA...GATTACCAAGCAGTTTGCTGAAAATTCAATCTTTGACCCAAACTGTAGCAATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR GCA 90 bp CCTTCTGCTTCAAACGAAAGAAATGGAGTGAGCAGGACCTCCCTTCGTTTCCGGTTTGGGTCATTTAGATaGTTCAGGAGATCATTGAGA +
Preference number: 4 (lower is better)
Translates to: PSASNERNGVSRTSLRFRFGSFR*FRRSLR
Trigger: TCTCAATGATCTCCTGAAGCATCTAAATGACCCAAA...CCGGAAACGAAGGGAGGTCCTGCTCACTCCATTTCTTTCGTTTGAAGCAGAAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CCA 90 bp GTGAGCAGGACCTCCCTTCGTTTCCGGCAAGTACACAGAAGCCTTGCTGTAGTACATCTCATCATTTCTTaGGACAAAGACTTTGATGAA +
Preference number: 4 (lower is better)
Translates to: VSRTSLRFRQVHRSLAVVHLIIS*DKDFDE
Trigger: TTCATCAAAGTCTTTGTCCCAAGAAATGATGAGATG...TACTACAGCAAGGCTTCTGTGTACTTGCCGGAAACGAAGGGAGGTCCTGCTCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CCA 90 bp GTGGCAAGTTCTGGTGTTACCAAAGTGACAGAGTTTCTTTGGCTACTTGTTTCTGCCAGGCCTTGGTTTTaGTACTTTGTCTTCGGGAAC +
Preference number: 4 (lower is better)
Translates to: VASSGVTKVTEFLWLLVSARPWF*YFVFGN
Trigger: GTTCCCGAAGACAAAGTACCAAAACCAAGGCCTGGC...AGAAACAAGTAGCCAAAGAAACTCTGTCACTTTGGTAACACCAGAACTTGCCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CCA 90 bp AAATTGCTACAGTTTGGGTCAAAGATTGAATTTTCAGCAAACTGCTTGGTAATCCTGCGAGGCCGTGTTTaGCACAACAGCCAGGCCTTG +
Preference number: 4 (lower is better)
Translates to: KLLQFGSKIEFSANCLVILRGRV*HNSQAL
Trigger: CAAGGCCTGGCTGTTGTGCCAAACACGGCCTCGCAG...GATTACCAAGCAGTTTGCTGAAAATTCAATCTTTGACCCAAACTGTAGCAATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CCA 90 bp GGTGTTACCAAAGTGACAGAGTTTCTTTGGCTACTTGTTTCTCTTAAAATACAAAGGGCTCATCGGCAATaGGTGGGACGGCAGAGTCCA +
Preference number: 4 (lower is better)
Translates to: GVTKVTEFLWLLVSLKIQRAHRQ*VGRQSP
Trigger: TGGACTCTGCCGTCCCACCCATTGCCGATGAGCCCT...TTGTATTTTAAGAGAAACAAGTAGCCAAAGAAACTCTGTCACTTTGGTAACACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CCA 90 bp AAATTGCTACAGTTTGGGTCAAAGATTGAATTTTCAGCAAACTGCTTGGTAATCTGGCAGTCCCCTAGGTaGGCTGTGTTGCCGTACTCC +
Preference number: 4 (lower is better)
Translates to: KLLQFGSKIEFSANCLVIWQSPR*AVLPYS
Trigger: GGAGTACGGCAACACAGCCCACCTAGGGGACTGCCA...GATTACCAAGCAGTTTGCTGAAAATTCAATCTTTGACCCAAACTGTAGCAATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CCA 90 bp GTACACAGAAGCCTTGCTGTAGTAGCTACATGTGGCAAGTTCTGGTGTTACCAATGTGGACCATCTGATTaGATTCTCCAGACTGGACTT +
Preference number: 4 (lower is better)
Translates to: VHRSLAVVATCGKFWCYQCGPSD*ILQTGL
Trigger: AAGTCCAGTCTGGAGAATCCAATCAGATGGTCCACA...TTGGTAACACCAGAACTTGCCACATGTAGCTACTACAGCAAGGCTTCTGTGTAC
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CCA 90 bp ACACAGAAGCCTTGCTGTAGTAGCTACATGTGGCAAGTTCTGGTGTTACCAAAGTGTGGACCATCTGATTaGATTCTCCAGACTGGACTT +
Preference number: 4 (lower is better)
Translates to: TQKPCCSSYMWQVLVLPKCGPSD*ILQTGL
Trigger: AAGTCCAGTCTGGAGAATCCAATCAGATGGTCCACA...CTTTGGTAACACCAGAACTTGCCACATGTAGCTACTACAGCAAGGCTTCTGTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CCA 90 bp GCTACATGTGGCAAGTTCTGGTGTTACCAAAGTGACAGAGTTTCTTTGGCTACTGAATCAATGTTCTGCTaGTATTCCTTGACGGGGCTG +
Preference number: 4 (lower is better)
Translates to: ATCGKFWCYQSDRVSLATESMFC*YSLTGL
Trigger: CAGCCCCGTCAAGGAATACCAGCAGAACATTGATTC...AGTAGCCAAAGAAACTCTGTCACTTTGGTAACACCAGAACTTGCCACATGTAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CCA 90 bp CACAGAATGGCAGTCTACATTGAACCCATTTTCAAGTATTTGTTCAGTCTTCTGTGCAGGGTCTTCTGGTaGAGGACAGGTGTGGATTCC +
Preference number: 4 (lower is better)
Translates to: HRMAVYIEPIFKYLFSLLCRVFW*RTGVDS
Trigger: GGAATCCACACCTGTCCTCCACCAGAAGACCCTGCA...CAGAAGACTGAACAAATACTTGAAAATGGGTTCAATGTAGACTGCCATTCTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CCA 90 bp GCAAACAACATTGTTGGTGGCAGATGTGTAGTGCTTATTGTTGGTTGGTTTAATATGCCCGTGACTCAATaGGGAATGGGGTGGAGGACT +
Preference number: 4 (lower is better)
Translates to: ANNIVGGRCVVLIVGWFNMPVTQ*GMGWRT
Trigger: AGTCCTCCACCCCATTCCCCATTGAGTCACGGGCAT...ATTAAACCAACCAACAATAAGCACTACACATCTGCCACCAACAATGTTGTTTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103241.8
CDS-3UTR CCA 90 bp GCAAACAACATTGTTGGTGGCAGATGTGTAGTGCTTATTGTTGGTTGGTTTAATGTCGTGAGTGGCGTTTaGAAGAACGATGGCACTGGG +
Preference number: 4 (lower is better)
Translates to: ANNIVGGRCVVLIVGWFNVVSGV*KNDGTG
Trigger: CCCAGTGCCATCGTTCTTCCAAACGCCACTCACGAC...ATTAAACCAACCAACAATAAGCACTACACATCTGCCACCAACAATGTTGTTTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103241.8
CDS-3UTR CCA 90 bp GTACACAGAAGCCTTGCTGTAGTAGCTACATGTGGCAAGTTCTGGTGTTACCAATTCTTTTCGGCTTTGTaGGCATTCGAGTTGGAGAAG +
Preference number: 4 (lower is better)
Translates to: VHRSLAVVATCGKFWCYQFFSAL*AFELEK
Trigger: CTTCTCCAACTCGAATGCCCACAAAGCCGAAAAGAA...TTGGTAACACCAGAACTTGCCACATGTAGCTACTACAGCAAGGCTTCTGTGTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CCA 90 bp GTGGCAAGTTCTGGTGTTACCAAAGTGACAGAGTTTCTTTGGCTACTTGTTTCTGGATCTCTCCCAGGATaGCTTTGGGGTTACTGTTTG +
Preference number: 4 (lower is better)
Translates to: VASSGVTKVTEFLWLLVSGSLPG*LWGYCL
Trigger: CAAACAGTAACCCCAAAGCCATCCTGGGAGAGATCC...AGAAACAAGTAGCCAAAGAAACTCTGTCACTTTGGTAACACCAGAACTTGCCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CCA 90 bp CTACATGTGGCAAGTTCTGGTGTTACCAAAGTGACAGAGTTTCTTTGGCTACTTTATTTCTGGGGAGTGTaGAGGGAGGGGAGTATAGAG +
Preference number: 4 (lower is better)
Translates to: LHVASSGVTKVTEFLWLLYFWGV*REGSIE
Trigger: CTCTATACTCCCCTCCCTCCACACTCCCCAGAAATA...AAGTAGCCAAAGAAACTCTGTCACTTTGGTAACACCAGAACTTGCCACATGTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CCA 90 bp GTGGCAAGTTCTGGTGTTACCAAAGTGACAGAGTTTCTTTGGCTACTTGTTTCTTATTTCTGGGGAGTGTaGAGGGAGGGGAGTATAGAG +
Preference number: 4 (lower is better)
Translates to: VASSGVTKVTEFLWLLVSYFWGV*REGSIE
Trigger: CTCTATACTCCCCTCCCTCCACACTCCCCAGAAATA...AGAAACAAGTAGCCAAAGAAACTCTGTCACTTTGGTAACACCAGAACTTGCCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CCA 90 bp CATCCCTTCTGCTTCAAACGAAAGAAATGGAGTGAGCAGGACCTCCCTTCGTTTATCTACTCTCTTGGTTaGACTATTTCTGGGGAGTGT +
Preference number: 4 (lower is better)
Translates to: HPFCFKRKKWSEQDLPSFIYSLG*TISGEC
Trigger: ACACTCCCCAGAAATAGTCCAACCAAGAGAGTAGAT...AAACGAAGGGAGGTCCTGCTCACTCCATTTCTTTCGTTTGAAGCAGAAGGGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CCA 90 bp ACACAGAAGCCTTGCTGTAGTAGCTACATGTGGCAAGTTCTGGTGTTACCAAAGGGACATCTACTCTCTTaGTTGGACTATTTCTGGGGA +
Preference number: 4 (lower is better)
Translates to: TQKPCCSSYMWQVLVLPKGHLLS*LDYFWG
Trigger: TCCCCAGAAATAGTCCAACCAAGAGAGTAGATGTCC...CTTTGGTAACACCAGAACTTGCCACATGTAGCTACTACAGCAAGGCTTCTGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CCA 90 bp GTACACAGAAGCCTTGCTGTAGTAGCTACATGTGGCAAGTTCTGGTGTTACCAAGGACATCTACTCTCTTaGTTGGACTATTTCTGGGGA +
Preference number: 4 (lower is better)
Translates to: VHRSLAVVATCGKFWCYQGHLLS*LDYFWG
Trigger: TCCCCAGAAATAGTCCAACCAAGAGAGTAGATGTCC...TTGGTAACACCAGAACTTGCCACATGTAGCTACTACAGCAAGGCTTCTGTGTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CCA 90 bp CACAGAATGGCAGTCTACATTGAACCCATTTTCAAGTATTTGTTCAGTCTTCTGTTGGCACCCCAGGAGTaGTGGGGACATCTACTCTCT +
Preference number: 4 (lower is better)
Translates to: HRMAVYIEPIFKYLFSLLLAPQE*WGHLLS
Trigger: AGAGAGTAGATGTCCCCACCACTCCTGGGGTGCCAA...CAGAAGACTGAACAAATACTTGAAAATGGGTTCAATGTAGACTGCCATTCTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CCA 90 bp GGTGTTACCAAAGTGACAGAGTTTCTTTGGCTACTTGTTTCTCTTAAAATACAACACCTTCGCCCCTGTTaGGGTGGGCATATAGCCTCC +
Preference number: 4 (lower is better)
Translates to: GVTKVTEFLWLLVSLKIQHLRPC*GGHIAS
Trigger: GGAGGCTATATGCCCACCCCAACAGGGGCGAAGGTG...TTGTATTTTAAGAGAAACAAGTAGCCAAAGAAACTCTGTCACTTTGGTAACACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CCA 90 bp AAATTGCTACAGTTTGGGTCAAAGATTGAATTTTCAGCAAACTGCTTGGTAATCCACCTTCGCCCCTGTTaGGGTGGGCATATAGCCTCC +
Preference number: 4 (lower is better)
Translates to: KLLQFGSKIEFSANCLVIHLRPC*GGHIAS
Trigger: GGAGGCTATATGCCCACCCCAACAGGGGCGAAGGTG...GATTACCAAGCAGTTTGCTGAAAATTCAATCTTTGACCCAAACTGTAGCAATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CCA 90 bp ACACAGAAGCCTTGCTGTAGTAGCTACATGTGGCAAGTTCTGGTGTTACCAAAGCGTGTACTTGTTCAGTaGTCTGACAGATGTGGTTTG +
Preference number: 4 (lower is better)
Translates to: TQKPCCSSYMWQVLVLPKRVLVQ*SDRCGL
Trigger: CAAACCACATCTGTCAGACCACTGAACAAGTACACG...CTTTGGTAACACCAGAACTTGCCACATGTAGCTACTACAGCAAGGCTTCTGTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CCA 90 bp CATCCCTTCTGCTTCAAACGAAAGAAATGGAGTGAGCAGGACCTCCCTTCGTTTCCGTACACCAGATGTTaGACCGCCAAATATTTTGTA +
Preference number: 4 (lower is better)
Translates to: HPFCFKRKKWSEQDLPSFPYTRC*TAKYFV
Trigger: TACAAAATATTTGGCGGTCCAACATCTGGTGTACGG...AAACGAAGGGAGGTCCTGCTCACTCCATTTCTTTCGTTTGAAGCAGAAGGGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000078621.12
CDS-3UTR CCA 90 bp CTGGCTACACATCCCTTCTGCTTCAAACGAAAGAAATGGAGTGAGCAGGACCTCTTTAGATGTAATTTCTaGGCTACTTGCCACAGTGGT +
Preference number: 4 (lower is better)
Translates to: LATHPFCFKRKKWSEQDLFRCNF*ATCHSG
Trigger: ACCACTGTGGCAAGTAGCCCAGAAATTACATCTAAA...GAGGTCCTGCTCACTCCATTTCTTTCGTTTGAAGCAGAAGGGATGTGTAGCCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000077847.12
ENSMUST00000103239.10
ENSMUST00000103240.9
CDS-3UTR CCA 90 bp CTGGCTACACATCCCTTCTGCTTCAAACGAAAGAAATGGAGTGAGCAGGACCTCCTCCATGTCAGATGTTaGACCGCCAAATATTTTGTA +
Preference number: 4 (lower is better)
Translates to: LATHPFCFKRKKWSEQDLLHVRC*TAKYFV
Trigger: TACAAAATATTTGGCGGTCCAACATCTGACATGGAG...GAGGTCCTGCTCACTCCATTTCTTTCGTTTGAAGCAGAAGGGATGTGTAGCCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000103239.10
ENSMUST00000103240.9
CDS-3UTR CCA 90 bp GTGGCAAGTTCTGGTGTTACCAAAGTGACAGAGTTTCTTTGGCTACTTGTTTCTTTGGATTCTCCAGACTaGACTTCCCACCGTACACCT +
Preference number: 4 (lower is better)
Translates to: VASSGVTKVTEFLWLLVSLDSPD*TSHRTP
Trigger: AGGTGTACGGTGGGAAGTCCAGTCTGGAGAATCCAA...AGAAACAAGTAGCCAAAGAAACTCTGTCACTTTGGTAACACCAGAACTTGCCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103240.9
CDS-3UTR TCA 90 bp CACAGAATGGCAGTCTACATTGAACCCATTTTCAAGTATTTGTTCAGTCTTCTGCTGCGATTCGTTGCCTaGAGGGCGTCCTCTAAAAAC +
Preference number: 4 (lower is better)
Translates to: HRMAVYIEPIFKYLFSLLLRFVA*RASSKN
Trigger: GTTTTTAGAGGACGCCCTTCAGGCAACGAATCGCAG...CAGAAGACTGAACAAATACTTGAAAATGGGTTCAATGTAGACTGCCATTCTGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR TCA 90 bp CTACATGTGGCAAGTTCTGGTGTTACCAAAGTGACAGAGTTTCTTTGGCTACTTATTTTCAACATCAGCTaGAAGTCCAGCCTGTGCTGC +
Preference number: 4 (lower is better)
Translates to: LHVASSGVTKVTEFLWLLIFNIS*KSSLCC
Trigger: GCAGCACAGGCTGGACTTTCAGCTGATGTTGAAAAT...AAGTAGCCAAAGAAACTCTGTCACTTTGGTAACACCAGAACTTGCCACATGTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR TCA 90 bp ACACAGAAGCCTTGCTGTAGTAGCTACATGTGGCAAGTTCTGGTGTTACCAAAGCCACGGCGATTTCTCTaGAGAAGAAATAGACATAGT +
Preference number: 4 (lower is better)
Translates to: TQKPCCSSYMWQVLVLPKPRRFL*RRNRHS
Trigger: ACTATGTCTATTTCTTCTTCAGAGAAATCGCCGTGG...CTTTGGTAACACCAGAACTTGCCACATGTAGCTACTACAGCAAGGCTTCTGTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR TCA 90 bp GTACACAGAAGCCTTGCTGTAGTAGCTACATGTGGCAAGTTCTGGTGTTACCAACAGTGGGGATGCCATTaGTTTGGATTATGTCTGTTA +
Preference number: 4 (lower is better)
Translates to: VHRSLAVVATCGKFWCYQQWGCH*FGLCLL
Trigger: TAACAGACATAATCCAAATCAATGGCATCCCCACTG...TTGGTAACACCAGAACTTGCCACATGTAGCTACTACAGCAAGGCTTCTGTGTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR TCA 90 bp ACACAGAAGCCTTGCTGTAGTAGCTACATGTGGCAAGTTCTGGTGTTACCAAAGCAGAGCCAACAAAGATaGCTGTGTAGTTTTGGTATG +
Preference number: 4 (lower is better)
Translates to: TQKPCCSSYMWQVLVLPKQSQQR*LCSFGM
Trigger: CATACCAAAACTACACAGTCATCTTTGTTGGCTCTG...CTTTGGTAACACCAGAACTTGCCACATGTAGCTACTACAGCAAGGCTTCTGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR TCA 90 bp CATGTGGCAAGTTCTGGTGTTACCAAAGTGACAGAGTTTCTTTGGCTACTTGTTTTCATGTGGACCATCTaGTTGGATTCTCCAGACTGG +
Preference number: 4 (lower is better)
Translates to: HVASSGVTKVTEFLWLLVFMWTI*LDSPDW
Trigger: CCAGTCTGGAGAATCCAATCAGATGGTCCACATGAA...AACAAGTAGCCAAAGAAACTCTGTCACTTTGGTAACACCAGAACTTGCCACATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR TCA 90 bp GCTACATGTGGCAAGTTCTGGTGTTACCAAAGTGACAGAGTTTCTTTGGCTACTGTAATCTGGTGTAGTTaGAGGAGGCAAACTTTCGTG +
Preference number: 4 (lower is better)
Translates to: ATCGKFWCYQSDRVSLATVIWCS*RRQTFV
Trigger: CACGAAAGTTTGCCTCCTTCAACTACACCAGATTAC...AGTAGCCAAAGAAACTCTGTCACTTTGGTAACACCAGAACTTGCCACATGTAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
CDS-3UTR TCA 90 bp AGTACTGTATCAGCTCTTTACACTGGTGAAGGGAGCCTTCCCTGGCTACACATCACCCTTTGGGATACCTaGTATAGTATCAGTAAAATC +
Preference number: 4 (lower is better)
Translates to: STVSALYTGEGSLPWLHITLWDT*YSISKI
Trigger: GATTTTACTGATACTATATCAGGTATCCCAAAGGGT...GATGTGTAGCCAGGGAAGGCTCCCTTCACCAGTGTAAAGAGCTGATACAGTACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000077847.12
ENSMUST00000103239.10
CDS-3UTR GCA 90 bp CTACATGTGGCAAGTTCTGGTGTTACCAAAGTGACAGAGTTTCTTTGGCTACTTATCAAACGGGCATCGTaGCAGGCCACTAATTTCTTC +
Preference number: 4 (lower is better)
Translates to: LHVASSGVTKVTEFLWLLIKRAS*QATNFF
Trigger: GAAGAAATTAGTGGCCTGGCACGATGCCCGTTTGAT...AAGTAGCCAAAGAAACTCTGTCACTTTGGTAACACCAGAACTTGCCACATGTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR GCA 90 bp GCTACATGTGGCAAGTTCTGGTGTTACCAAAGTGACAGAGTTTCTTTGGCTACTTGTCGTTTTTACAAATaGGAGCCACGCGGGAATACA +
Preference number: 4 (lower is better)
Translates to: ATCGKFWCYQSDRVSLATCRFYK*EPRGNT
Trigger: TGTATTCCCGCGTGGCTCGCATTTGTAAAAACGACA...AGTAGCCAAAGAAACTCTGTCACTTTGGTAACACCAGAACTTGCCACATGTAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR GCA 90 bp CACAGAATGGCAGTCTACATTGAACCCATTTTCAAGTATTTGTTCAGTCTTCTGGGTCTTGTAAGCTTCTaGGAGGCCGTGTTTGGCACA +
Preference number: 4 (lower is better)
Translates to: HRMAVYIEPIFKYLFSLLGLVSF*EAVFGT
Trigger: TGTGCCAAACACGGCCTCGCAGAAGCTTACAAGACC...CAGAAGACTGAACAAATACTTGAAAATGGGTTCAATGTAGACTGCCATTCTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR GCA 90 bp ACACAGAAGCCTTGCTGTAGTAGCTACATGTGGCAAGTTCTGGTGTTACCAAAGGGTCACGTGATGCAATaGAAGACTTTTTACACGATC +
Preference number: 4 (lower is better)
Translates to: TQKPCCSSYMWQVLVLPKGHVMQ*KTFYTI
Trigger: GATCGTGTAAAAAGTCTTGCATTGCATCACGTGACC...CTTTGGTAACACCAGAACTTGCCACATGTAGCTACTACAGCAAGGCTTCTGTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR GCA 90 bp CTACATGTGGCAAGTTCTGGTGTTACCAAAGTGACAGAGTTTCTTTGGCTACTTCGACTGGGCGGATTCTaGGTCTTTATGGATCTTTCT +
Preference number: 4 (lower is better)
Translates to: LHVASSGVTKVTEFLWLLRLGGF*VFMDLS
Trigger: AGAAAGATCCATAAAGACGCAGAATCCGCCCAGTCG...AAGTAGCCAAAGAAACTCTGTCACTTTGGTAACACCAGAACTTGCCACATGTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR GCA 90 bp GGTGTTACCAAAGTGACAGAGTTTCTTTGGCTACTTGTTTCTCTTAAAATACAATTCCGCTGGAGTCTGTaGACGACTGGGCGGATTCTG +
Preference number: 4 (lower is better)
Translates to: GVTKVTEFLWLLVSLKIQFRWSL*TTGRIL
Trigger: CAGAATCCGCCCAGTCGTGCACAGACTCCAGCGGAA...TTGTATTTTAAGAGAAACAAGTAGCCAAAGAAACTCTGTCACTTTGGTAACACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR GCA 90 bp CTTCCCTGGCTACACATCCCTTCTGCTTCAAACGAAAGAAATGGAGTGAGCAGGTTTGGGTCATTTAGATaGTTCAGGAGATCATTGAGA +
Preference number: 4 (lower is better)
Translates to: LPWLHIPSASNERNGVSRFGSFR*FRRSLR
Trigger: TCTCAATGATCTCCTGAAGCATCTAAATGACCCAAA...CCTGCTCACTCCATTTCTTTCGTTTGAAGCAGAAGGGATGTGTAGCCAGGGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CCA 90 bp CATCCCTTCTGCTTCAAACGAAAGAAATGGAGTGAGCAGGACCTCCCTTCGTTTGGTATCACCTCTGTTTaGGGGATTTCATTTAAGTTC +
Preference number: 4 (lower is better)
Translates to: HPFCFKRKKWSEQDLPSFGITSV*GISFKF
Trigger: GAACTTAAATGAAATCCCCCAAACAGAGGTGATACC...AAACGAAGGGAGGTCCTGCTCACTCCATTTCTTTCGTTTGAAGCAGAAGGGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CCA 90 bp CCTTCTGCTTCAAACGAAAGAAATGGAGTGAGCAGGACCTCCCTTCGTTTCCGGCATCTCATCATTTCTTaGGACAAAGACTTTGATGAA +
Preference number: 4 (lower is better)
Translates to: PSASNERNGVSRTSLRFRHLIIS*DKDFDE
Trigger: TTCATCAAAGTCTTTGTCCCAAGAAATGATGAGATG...CCGGAAACGAAGGGAGGTCCTGCTCACTCCATTTCTTTCGTTTGAAGCAGAAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CCA 90 bp GTACACAGAAGCCTTGCTGTAGTAGCTACATGTGGCAAGTTCTGGTGTTACCAAGGAAATCAGCCACTGTaGCAGAATAGAGTTTTCCAT +
Preference number: 4 (lower is better)
Translates to: VHRSLAVVATCGKFWCYQGNQPL*QNRVFH
Trigger: ATGGAAAACTCTATTCTGCCACAGTGGCTGATTTCC...TTGGTAACACCAGAACTTGCCACATGTAGCTACTACAGCAAGGCTTCTGTGTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CCA 90 bp CACAGAATGGCAGTCTACATTGAACCCATTTTCAAGTATTTGTTCAGTCTTCTGGAGTCTGTGCACGACTaGGCGGATTCTGCGTCTTTA +
Preference number: 4 (lower is better)
Translates to: HRMAVYIEPIFKYLFSLLESVHD*ADSASL
Trigger: TAAAGACGCAGAATCCGCCCAGTCGTGCACAGACTC...CAGAAGACTGAACAAATACTTGAAAATGGGTTCAATGTAGACTGCCATTCTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CCA 90 bp CATGTGGCAAGTTCTGGTGTTACCAAAGTGACAGAGTTTCTTTGGCTACTTGTTGAATCAATGTTCTGCTaGTATTCCTTGACGGGGCTG +
Preference number: 4 (lower is better)
Translates to: HVASSGVTKVTEFLWLLVESMFC*YSLTGL
Trigger: CAGCCCCGTCAAGGAATACCAGCAGAACATTGATTC...AACAAGTAGCCAAAGAAACTCTGTCACTTTGGTAACACCAGAACTTGCCACATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CCA 90 bp AAATTGCTACAGTTTGGGTCAAAGATTGAATTTTCAGCAAACTGCTTGGTAATCGCCTGCAGGGTCTTCTaGTGGAGGACAGGTGTGGAT +
Preference number: 4 (lower is better)
Translates to: KLLQFGSKIEFSANCLVIACRVF*WRTGVD
Trigger: ATCCACACCTGTCCTCCACCAGAAGACCCTGCAGGC...GATTACCAAGCAGTTTGCTGAAAATTCAATCTTTGACCCAAACTGTAGCAATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CCA 90 bp GGTGTTACCAAAGTGACAGAGTTTCTTTGGCTACTTGTTTCTCTTAAAATACAAGCCTGCAGGGTCTTCTaGTGGAGGACAGGTGTGGAT +
Preference number: 4 (lower is better)
Translates to: GVTKVTEFLWLLVSLKIQACRVF*WRTGVD
Trigger: ATCCACACCTGTCCTCCACCAGAAGACCCTGCAGGC...TTGTATTTTAAGAGAAACAAGTAGCCAAAGAAACTCTGTCACTTTGGTAACACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CCA 90 bp GGTGTTACCAAAGTGACAGAGTTTCTTTGGCTACTTGTTTCTCTTAAAATACAATGGGCCTTCTCAGAGTaGCTCTTCATGGCCTGCAGG +
Preference number: 4 (lower is better)
Translates to: GVTKVTEFLWLLVSLKIQWAFSE*LFMACR
Trigger: CCTGCAGGCCATGAAGAGCCACTCTGAGAAGGCCCA...TTGTATTTTAAGAGAAACAAGTAGCCAAAGAAACTCTGTCACTTTGGTAACACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CCA 90 bp CACAGAATGGCAGTCTACATTGAACCCATTTTCAAGTATTTGTTCAGTCTTCTGCGTTTGGAAGAACGATaGCACTGGGGATATGCCCGT +
Preference number: 4 (lower is better)
Translates to: HRMAVYIEPIFKYLFSLLRLEER*HWGYAR
Trigger: ACGGGCATATCCCCAGTGCCATCGTTCTTCCAAACG...CAGAAGACTGAACAAATACTTGAAAATGGGTTCAATGTAGACTGCCATTCTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CCA 90 bp GCTACATGTGGCAAGTTCTGGTGTTACCAAAGTGACAGAGTTTCTTTGGCTACTTATTGTAGTCGTGAGTaGCGTTTGGAAGAACGATGG +
Preference number: 4 (lower is better)
Translates to: ATCGKFWCYQSDRVSLATYCSRE*RLEERW
Trigger: CCATCGTTCTTCCAAACGCCACTCACGACTACAATA...AGTAGCCAAAGAAACTCTGTCACTTTGGTAACACCAGAACTTGCCACATGTAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CCA 90 bp GCTACATGTGGCAAGTTCTGGTGTTACCAAAGTGACAGAGTTTCTTTGGCTACTTTCTTTTCGGCTTTGTaGGCATTCGAGTTGGAGAAG +
Preference number: 4 (lower is better)
Translates to: ATCGKFWCYQSDRVSLATFFSAL*AFELEK
Trigger: CTTCTCCAACTCGAATGCCCACAAAGCCGAAAAGAA...AGTAGCCAAAGAAACTCTGTCACTTTGGTAACACCAGAACTTGCCACATGTAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR TCA 90 bp GCTACATGTGGCAAGTTCTGGTGTTACCAAAGTGACAGAGTTTCTTTGGCTACTCAGTGGGGATGCCATTaGTTTGGATTATGTCTGTTA +
Preference number: 4 (lower is better)
Translates to: ATCGKFWCYQSDRVSLATQWGCH*FGLCLL
Trigger: TAACAGACATAATCCAAATCAATGGCATCCCCACTG...AGTAGCCAAAGAAACTCTGTCACTTTGGTAACACCAGAACTTGCCACATGTAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR TCA 90 bp GCTACATGTGGCAAGTTCTGGTGTTACCAAAGTGACAGAGTTTCTTTGGCTACTCAGAGCCAACAAAGATaGCTGTGTAGTTTTGGTATG +
Preference number: 4 (lower is better)
Translates to: ATCGKFWCYQSDRVSLATQSQQR*LCSFGM
Trigger: CATACCAAAACTACACAGTCATCTTTGTTGGCTCTG...AGTAGCCAAAGAAACTCTGTCACTTTGGTAACACCAGAACTTGCCACATGTAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR TCA 90 bp GGTGTTACCAAAGTGACAGAGTTTCTTTGGCTACTTGTTTCTCTTAAAATACAATCTGCTGGTATTCCTTaGCGGGGCTGTCAAAGAGGC +
Preference number: 4 (lower is better)
Translates to: GVTKVTEFLWLLVSLKIQSAGIP*RGCQRG
Trigger: GCCTCTTTGACAGCCCCGTCAAGGAATACCAGCAGA...TTGTATTTTAAGAGAAACAAGTAGCCAAAGAAACTCTGTCACTTTGGTAACACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR TCA 90 bp GTGGCAAGTTCTGGTGTTACCAAAGTGACAGAGTTTCTTTGGCTACTTGTTTCTGCTTCAGGAGATCATTaGGAGTATTCCTGGAATCCA +
Preference number: 4 (lower is better)
Translates to: VASSGVTKVTEFLWLLVSASGDH*EYSWNP
Trigger: TGGATTCCAGGAATACTCTCAATGATCTCCTGAAGC...AGAAACAAGTAGCCAAAGAAACTCTGTCACTTTGGTAACACCAGAACTTGCCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR TCA 90 bp GCTACATGTGGCAAGTTCTGGTGTTACCAAAGTGACAGAGTTTCTTTGGCTACTGTATTTGGGTCATCTTaGACTACAAATTTCCGGGAG +
Preference number: 4 (lower is better)
Translates to: ATCGKFWCYQSDRVSLATVFGSS*TTNFRE
Trigger: CTCCCGGAAATTTGTAGTTCAAGATGACCCAAATAC...AGTAGCCAAAGAAACTCTGTCACTTTGGTAACACCAGAACTTGCCACATGTAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000077847.12
ENSMUST00000103239.10
ENSMUST00000103240.9
CDS-3UTR GCA 90 bp ACACAGAAGCCTTGCTGTAGTAGCTACATGTGGCAAGTTCTGGTGTTACCAAAGAATCGTATTTTATTGTaGGAAGGGCAGATCCATCTC +
Preference number: 4 (lower is better)
Translates to: TQKPCCSSYMWQVLVLPKNRILL*EGQIHL
Trigger: GAGATGGATCTGCCCTTCGCACAATAAAATACGATT...CTTTGGTAACACCAGAACTTGCCACATGTAGCTACTACAGCAAGGCTTCTGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR GCA 90 bp GTGGCAAGTTCTGGTGTTACCAAAGTGACAGAGTTTCTTTGGCTACTTGTTTCTTGTCGTTTTTACAAATaGGAGCCACGCGGGAATACA +
Preference number: 4 (lower is better)
Translates to: VASSGVTKVTEFLWLLVSCRFYK*EPRGNT
Trigger: TGTATTCCCGCGTGGCTCGCATTTGTAAAAACGACA...AGAAACAAGTAGCCAAAGAAACTCTGTCACTTTGGTAACACCAGAACTTGCCAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR GCA 90 bp CATGTGGCAAGTTCTGGTGTTACCAAAGTGACAGAGTTTCTTTGGCTACTTGTTTGTCGTTTTTACAAATaGGAGCCACGCGGGAATACA +
Preference number: 4 (lower is better)
Translates to: HVASSGVTKVTEFLWLLVCRFYK*EPRGNT
Trigger: TGTATTCCCGCGTGGCTCGCATTTGTAAAAACGACA...AACAAGTAGCCAAAGAAACTCTGTCACTTTGGTAACACCAGAACTTGCCACATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR GCA 90 bp GCTACATGTGGCAAGTTCTGGTGTTACCAAAGTGACAGAGTTTCTTTGGCTACTAATTTCTGGGCTACTTaGCACAGTGGTAACAGAAGA +
Preference number: 4 (lower is better)
Translates to: ATCGKFWCYQSDRVSLATNFWAT*HSGNRR
Trigger: TCTTCTGTTACCACTGTGGCAAGTAGCCCAGAAATT...AGTAGCCAAAGAAACTCTGTCACTTTGGTAACACCAGAACTTGCCACATGTAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000077847.12
ENSMUST00000103239.10
ENSMUST00000103240.9
CDS-3UTR CCA 90 bp GTACACAGAAGCCTTGCTGTAGTAGCTACATGTGGCAAGTTCTGGTGTTACCAAGGTATCACCTCTGTTTaGGGGATTTCATTTAAGTTC +
Preference number: 4 (lower is better)
Translates to: VHRSLAVVATCGKFWCYQGITSV*GISFKF
Trigger: GAACTTAAATGAAATCCCCCAAACAGAGGTGATACC...TTGGTAACACCAGAACTTGCCACATGTAGCTACTACAGCAAGGCTTCTGTGTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CCA 90 bp CTGGCTACACATCCCTTCTGCTTCAAACGAAAGAAATGGAGTGAGCAGGACCTCCATCTCATCATTTCTTaGGACAAAGACTTTGATGAA +
Preference number: 4 (lower is better)
Translates to: LATHPFCFKRKKWSEQDLHLIIS*DKDFDE
Trigger: TTCATCAAAGTCTTTGTCCCAAGAAATGATGAGATG...GAGGTCCTGCTCACTCCATTTCTTTCGTTTGAAGCAGAAGGGATGTGTAGCCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CCA 90 bp CATGTGGCAAGTTCTGGTGTTACCAAAGTGACAGAGTTTCTTTGGCTACTTGTTGGCATGAAGGAAGTGTaGTTCTTTGATCCACTTGGA +
Preference number: 4 (lower is better)
Translates to: HVASSGVTKVTEFLWLLVGMKEV*FFDPLG
Trigger: TCCAAGTGGATCAAAGAACCACACTTCCTTCATGCC...AACAAGTAGCCAAAGAAACTCTGTCACTTTGGTAACACCAGAACTTGCCACATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CCA 90 bp CTACATGTGGCAAGTTCTGGTGTTACCAAAGTGACAGAGTTTCTTTGGCTACTTTATCCTCCAGGGCTGTaGTTATGGAAAGCAAAGAAG +
Preference number: 4 (lower is better)
Translates to: LHVASSGVTKVTEFLWLLYPPGL*LWKAKK
Trigger: CTTCTTTGCTTTCCATAACCACAGCCCTGGAGGATA...AAGTAGCCAAAGAAACTCTGTCACTTTGGTAACACCAGAACTTGCCACATGTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000051419.15
ENSMUST00000078621.12
CDS-3UTR CCA 90 bp GTGGCAAGTTCTGGTGTTACCAAAGTGACAGAGTTTCTTTGGCTACTTGTTTCTTGTGGACCATCTGATTaGATTCTCCAGACTGGACTT +
Preference number: 4 (lower is better)
Translates to: VASSGVTKVTEFLWLLVSCGPSD*ILQTGL
Trigger: AAGTCCAGTCTGGAGAATCCAATCAGATGGTCCACA...AGAAACAAGTAGCCAAAGAAACTCTGTCACTTTGGTAACACCAGAACTTGCCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CCA 90 bp GCTACATGTGGCAAGTTCTGGTGTTACCAAAGTGACAGAGTTTCTTTGGCTACTGGTTGCTGTAGAGTTTaGGAGAATCAATGTTCTGCT +
Preference number: 4 (lower is better)
Translates to: ATCGKFWCYQSDRVSLATGCCRV*ENQCSA
Trigger: AGCAGAACATTGATTCTCCCAAACTCTACAGCAACC...AGTAGCCAAAGAAACTCTGTCACTTTGGTAACACCAGAACTTGCCACATGTAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CCA 90 bp AAATTGCTACAGTTTGGGTCAAAGATTGAATTTTCAGCAAACTGCTTGGTAATCCAGAGTGGCTCTTCATaGCCTGCAGGGTCTTCTGGT +
Preference number: 4 (lower is better)
Translates to: KLLQFGSKIEFSANCLVIQSGSS*PAGSSG
Trigger: ACCAGAAGACCCTGCAGGCCATGAAGAGCCACTCTG...GATTACCAAGCAGTTTGCTGAAAATTCAATCTTTGACCCAAACTGTAGCAATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CCA 90 bp AAATTGCTACAGTTTGGGTCAAAGATTGAATTTTCAGCAAACTGCTTGGTAATCTTCCTTGAAGCACCGTaGCTGTGGGCCTTCTCAGAG +
Preference number: 4 (lower is better)
Translates to: KLLQFGSKIEFSANCLVIFLEAP*LWAFSE
Trigger: CTCTGAGAAGGCCCACAGCCACGGTGCTTCAAGGAA...GATTACCAAGCAGTTTGCTGAAAATTCAATCTTTGACCCAAACTGTAGCAATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CCA 90 bp GTGGCAAGTTCTGGTGTTACCAAAGTGACAGAGTTTCTTTGGCTACTTGTTTCTTATTGTAGTCGTGAGTaGCGTTTGGAAGAACGATGG +
Preference number: 4 (lower is better)
Translates to: VASSGVTKVTEFLWLLVSYCSRE*RLEERW
Trigger: CCATCGTTCTTCCAAACGCCACTCACGACTACAATA...AGAAACAAGTAGCCAAAGAAACTCTGTCACTTTGGTAACACCAGAACTTGCCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CCA 90 bp CATGTGGCAAGTTCTGGTGTTACCAAAGTGACAGAGTTTCTTTGGCTACTTGTTTATTGTAGTCGTGAGTaGCGTTTGGAAGAACGATGG +
Preference number: 4 (lower is better)
Translates to: HVASSGVTKVTEFLWLLVYCSRE*RLEERW
Trigger: CCATCGTTCTTCCAAACGCCACTCACGACTACAATA...AACAAGTAGCCAAAGAAACTCTGTCACTTTGGTAACACCAGAACTTGCCACATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CCA 90 bp CTACATGTGGCAAGTTCTGGTGTTACCAAAGTGACAGAGTTTCTTTGGCTACTTTATTGTAGTCGTGAGTaGCGTTTGGAAGAACGATGG +
Preference number: 4 (lower is better)
Translates to: LHVASSGVTKVTEFLWLLYCSRE*RLEERW
Trigger: CCATCGTTCTTCCAAACGCCACTCACGACTACAATA...AAGTAGCCAAAGAAACTCTGTCACTTTGGTAACACCAGAACTTGCCACATGTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CCA 90 bp GCTACATGTGGCAAGTTCTGGTGTTACCAAAGTGACAGAGTTTCTTTGGCTACTATCTACTCTCTTGGTTaGACTATTTCTGGGGAGTGT +
Preference number: 4 (lower is better)
Translates to: ATCGKFWCYQSDRVSLATIYSLG*TISGEC
Trigger: ACACTCCCCAGAAATAGTCCAACCAAGAGAGTAGAT...AGTAGCCAAAGAAACTCTGTCACTTTGGTAACACCAGAACTTGCCACATGTAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CCA 90 bp CTACATGTGGCAAGTTCTGGTGTTACCAAAGTGACAGAGTTTCTTTGGCTACTTCGTGTACTTGTTCAGTaGTCTGACAGATGTGGTTTG +
Preference number: 4 (lower is better)
Translates to: LHVASSGVTKVTEFLWLLRVLVQ*SDRCGL
Trigger: CAAACCACATCTGTCAGACCACTGAACAAGTACACG...AAGTAGCCAAAGAAACTCTGTCACTTTGGTAACACCAGAACTTGCCACATGTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR TCA 90 bp CACAGAATGGCAGTCTACATTGAACCCATTTTCAAGTATTTGTTCAGTCTTCTGATTTTCAACATCAGCTaGAAGTCCAGCCTGTGCTGC +
Preference number: 4 (lower is better)
Translates to: HRMAVYIEPIFKYLFSLLIFNIS*KSSLCC
Trigger: GCAGCACAGGCTGGACTTTCAGCTGATGTTGAAAAT...CAGAAGACTGAACAAATACTTGAAAATGGGTTCAATGTAGACTGCCATTCTGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR TCA 90 bp CTACATGTGGCAAGTTCTGGTGTTACCAAAGTGACAGAGTTTCTTTGGCTACTTCCACGGCGATTTCTCTaGAGAAGAAATAGACATAGT +
Preference number: 4 (lower is better)
Translates to: LHVASSGVTKVTEFLWLLPRRFL*RRNRHS
Trigger: ACTATGTCTATTTCTTCTTCAGAGAAATCGCCGTGG...AAGTAGCCAAAGAAACTCTGTCACTTTGGTAACACCAGAACTTGCCACATGTAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR TCA 90 bp CTACATGTGGCAAGTTCTGGTGTTACCAAAGTGACAGAGTTTCTTTGGCTACTTCAGTGGGGATGCCATTaGTTTGGATTATGTCTGTTA +
Preference number: 4 (lower is better)
Translates to: LHVASSGVTKVTEFLWLLQWGCH*FGLCLL
Trigger: TAACAGACATAATCCAAATCAATGGCATCCCCACTG...AAGTAGCCAAAGAAACTCTGTCACTTTGGTAACACCAGAACTTGCCACATGTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR TCA 90 bp GTGGCAAGTTCTGGTGTTACCAAAGTGACAGAGTTTCTTTGGCTACTTGTTTCTCAGTGGGGATGCCATTaGTTTGGATTATGTCTGTTA +
Preference number: 4 (lower is better)
Translates to: VASSGVTKVTEFLWLLVSQWGCH*FGLCLL
Trigger: TAACAGACATAATCCAAATCAATGGCATCCCCACTG...AGAAACAAGTAGCCAAAGAAACTCTGTCACTTTGGTAACACCAGAACTTGCCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR TCA 90 bp CATGTGGCAAGTTCTGGTGTTACCAAAGTGACAGAGTTTCTTTGGCTACTTGTTCAGAGCCAACAAAGATaGCTGTGTAGTTTTGGTATG +
Preference number: 4 (lower is better)
Translates to: HVASSGVTKVTEFLWLLVQSQQR*LCSFGM
Trigger: CATACCAAAACTACACAGTCATCTTTGTTGGCTCTG...AACAAGTAGCCAAAGAAACTCTGTCACTTTGGTAACACCAGAACTTGCCACATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR TCA 90 bp AAATTGCTACAGTTTGGGTCAAAGATTGAATTTTCAGCAAACTGCTTGGTAATCCTCCCGCTTACTGGATaGCTTCGTAAGAGGGTGATC +
Preference number: 4 (lower is better)
Translates to: KLLQFGSKIEFSANCLVILPLTG*LRKRVI
Trigger: GATCACCCTCTTACGAAGTCATCCAGTAAGCGGGAG...GATTACCAAGCAGTTTGCTGAAAATTCAATCTTTGACCCAAACTGTAGCAATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR TCA 90 bp GGTGTTACCAAAGTGACAGAGTTTCTTTGGCTACTTGTTTCTCTTAAAATACAACTCCCGCTTACTGGATaGCTTCGTAAGAGGGTGATC +
Preference number: 4 (lower is better)
Translates to: GVTKVTEFLWLLVSLKIQLPLTG*LRKRVI
Trigger: GATCACCCTCTTACGAAGTCATCCAGTAAGCGGGAG...TTGTATTTTAAGAGAAACAAGTAGCCAAAGAAACTCTGTCACTTTGGTAACACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR TCA 90 bp GTGGCAAGTTCTGGTGTTACCAAAGTGACAGAGTTTCTTTGGCTACTTGTTTCTGTATTTGGGTCATCTTaGACTACAAATTTCCGGGAG +
Preference number: 4 (lower is better)
Translates to: VASSGVTKVTEFLWLLVSVFGSS*TTNFRE
Trigger: CTCCCGGAAATTTGTAGTTCAAGATGACCCAAATAC...AGAAACAAGTAGCCAAAGAAACTCTGTCACTTTGGTAACACCAGAACTTGCCAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000077847.12
ENSMUST00000103239.10
ENSMUST00000103240.9
CDS-3UTR GCA 90 bp CACAGAATGGCAGTCTACATTGAACCCATTTTCAAGTATTTGTTCAGTCTTCTGATCAAACGGGCATCGTaGCAGGCCACTAATTTCTTC +
Preference number: 4 (lower is better)
Translates to: HRMAVYIEPIFKYLFSLLIKRAS*QATNFF
Trigger: GAAGAAATTAGTGGCCTGGCACGATGCCCGTTTGAT...CAGAAGACTGAACAAATACTTGAAAATGGGTTCAATGTAGACTGCCATTCTGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR GCA 90 bp GCAAACAACATTGTTGGTGGCAGATGTGTAGTGCTTATTGTTGGTTGGTTTAATATCAAACGGGCATCGTaGCAGGCCACTAATTTCTTC +
Preference number: 4 (lower is better)
Translates to: ANNIVGGRCVVLIVGWFNIKRAS*QATNFF
Trigger: GAAGAAATTAGTGGCCTGGCACGATGCCCGTTTGAT...ATTAAACCAACCAACAATAAGCACTACACATCTGCCACCAACAATGTTGTTTGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103241.8
CDS-3UTR GCA 90 bp CATGTGGCAAGTTCTGGTGTTACCAAAGTGACAGAGTTTCTTTGGCTACTTGTTGGTCACGTGATGCAATaGAAGACTTTTTACACGATC +
Preference number: 4 (lower is better)
Translates to: HVASSGVTKVTEFLWLLVGHVMQ*KTFYTI
Trigger: GATCGTGTAAAAAGTCTTGCATTGCATCACGTGACC...AACAAGTAGCCAAAGAAACTCTGTCACTTTGGTAACACCAGAACTTGCCACATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR GCA 90 bp GCAAACAACATTGTTGGTGGCAGATGTGTAGTGCTTATTGTTGGTTGGTTTAATCGACTGGGCGGATTCTaGGTCTTTATGGATCTTTCT +
Preference number: 4 (lower is better)
Translates to: ANNIVGGRCVVLIVGWFNRLGGF*VFMDLS
Trigger: AGAAAGATCCATAAAGACGCAGAATCCGCCCAGTCG...ATTAAACCAACCAACAATAAGCACTACACATCTGCCACCAACAATGTTGTTTGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103241.8
CDS-3UTR GCA 90 bp CACAGAATGGCAGTCTACATTGAACCCATTTTCAAGTATTTGTTCAGTCTTCTGCGACTGGGCGGATTCTaGGTCTTTATGGATCTTTCT +
Preference number: 4 (lower is better)
Translates to: HRMAVYIEPIFKYLFSLLRLGGF*VFMDLS
Trigger: AGAAAGATCCATAAAGACGCAGAATCCGCCCAGTCG...CAGAAGACTGAACAAATACTTGAAAATGGGTTCAATGTAGACTGCCATTCTGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CCA 90 bp GTGGCAAGTTCTGGTGTTACCAAAGTGACAGAGTTTCTTTGGCTACTTGTTTCTGGAAATCAGCCACTGTaGCAGAATAGAGTTTTCCAT +
Preference number: 4 (lower is better)
Translates to: VASSGVTKVTEFLWLLVSGNQPL*QNRVFH
Trigger: ATGGAAAACTCTATTCTGCCACAGTGGCTGATTTCC...AGAAACAAGTAGCCAAAGAAACTCTGTCACTTTGGTAACACCAGAACTTGCCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CCA 90 bp CACAGAATGGCAGTCTACATTGAACCCATTTTCAAGTATTTGTTCAGTCTTCTGCCAGGGCTGTGGTTATaGAAAGCAAAGAAGTCTTCG +
Preference number: 4 (lower is better)
Translates to: HRMAVYIEPIFKYLFSLLPGLWL*KAKKSS
Trigger: CGAAGACTTCTTTGCTTTCCATAACCACAGCCCTGG...CAGAAGACTGAACAAATACTTGAAAATGGGTTCAATGTAGACTGCCATTCTGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000051419.15
ENSMUST00000078621.12
CDS-3UTR CCA 90 bp AAATTGCTACAGTTTGGGTCAAAGATTGAATTTTCAGCAAACTGCTTGGTAATCTTGGATTCTCCAGACTaGACTTCCCACCGTACACCG +
Preference number: 4 (lower is better)
Translates to: KLLQFGSKIEFSANCLVILDSPD*TSHRTP
Trigger: CGGTGTACGGTGGGAAGTCCAGTCTGGAGAATCCAA...GATTACCAAGCAGTTTGCTGAAAATTCAATCTTTGACCCAAACTGTAGCAATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000103241.8
CDS-3UTR CCA 90 bp AAATTGCTACAGTTTGGGTCAAAGATTGAATTTTCAGCAAACTGCTTGGTAATCGAAGAACGATGGCACTaGGGATATGCCCGTGACTCA +
Preference number: 4 (lower is better)
Translates to: KLLQFGSKIEFSANCLVIEERWH*GYARDS
Trigger: TGAGTCACGGGCATATCCCCAGTGCCATCGTTCTTC...GATTACCAAGCAGTTTGCTGAAAATTCAATCTTTGACCCAAACTGTAGCAATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CCA 90 bp CATGTGGCAAGTTCTGGTGTTACCAAAGTGACAGAGTTTCTTTGGCTACTTGTTTGTGGGCATTCGAGTTaGAGAAGGATGTATTGTAGT +
Preference number: 4 (lower is better)
Translates to: HVASSGVTKVTEFLWLLVCGHSS*RRMYCS
Trigger: ACTACAATACATCCTTCTCCAACTCGAATGCCCACA...AACAAGTAGCCAAAGAAACTCTGTCACTTTGGTAACACCAGAACTTGCCACATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CCA 90 bp CATGTGGCAAGTTCTGGTGTTACCAAAGTGACAGAGTTTCTTTGGCTACTTGTTATCTACTCTCTTGGTTaGACTATTTCTGGGGAGTGT +
Preference number: 4 (lower is better)
Translates to: HVASSGVTKVTEFLWLLVIYSLG*TISGEC
Trigger: ACACTCCCCAGAAATAGTCCAACCAAGAGAGTAGAT...AACAAGTAGCCAAAGAAACTCTGTCACTTTGGTAACACCAGAACTTGCCACATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CCA 90 bp GGTGTTACCAAAGTGACAGAGTTTCTTTGGCTACTTGTTTCTCTTAAAATACAAGGAGGGTGCCATTACTaGTATAGCTGCTCTGTCTGG +
Preference number: 4 (lower is better)
Translates to: GVTKVTEFLWLLVSLKIQGGCHY*YSCSVW
Trigger: CCAGACAGAGCAGCTATACCAGTAATGGCACCCTCC...TTGTATTTTAAGAGAAACAAGTAGCCAAAGAAACTCTGTCACTTTGGTAACACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR TCA 90 bp AAATTGCTACAGTTTGGGTCAAAGATTGAATTTTCAGCAAACTGCTTGGTAATCCCATGCTTCTGTAAATaGCAGCATCACTGGCCAGGA +
Preference number: 4 (lower is better)
Translates to: KLLQFGSKIEFSANCLVIPCFCK*QHHWPG
Trigger: TCCTGGCCAGTGATGCTGTCATTTACAGAAGCATGG...GATTACCAAGCAGTTTGCTGAAAATTCAATCTTTGACCCAAACTGTAGCAATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR TCA 90 bp GCAAACAACATTGTTGGTGGCAGATGTGTAGTGCTTATTGTTGGTTGGTTTAATGCTTCAGGAGATCATTaGGAGTATTCCTGGAATCCA +
Preference number: 4 (lower is better)
Translates to: ANNIVGGRCVVLIVGWFNASGDH*EYSWNP
Trigger: TGGATTCCAGGAATACTCTCAATGATCTCCTGAAGC...ATTAAACCAACCAACAATAAGCACTACACATCTGCCACCAACAATGTTGTTTGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103241.8
CDS-3UTR TCA 90 bp CACAGAATGGCAGTCTACATTGAACCCATTTTCAAGTATTTGTTCAGTCTTCTGGCTTCAGGAGATCATTaGGAGTATTCCTGGAATCCA +
Preference number: 4 (lower is better)
Translates to: HRMAVYIEPIFKYLFSLLASGDH*EYSWNP
Trigger: TGGATTCCAGGAATACTCTCAATGATCTCCTGAAGC...CAGAAGACTGAACAAATACTTGAAAATGGGTTCAATGTAGACTGCCATTCTGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR GCA 90 bp GTGGCAAGTTCTGGTGTTACCAAAGTGACAGAGTTTCTTTGGCTACTTGTTTCTAATCGTATTTTATTGTaGGAAGGGCAGATCCATCTC +
Preference number: 4 (lower is better)
Translates to: VASSGVTKVTEFLWLLVSNRILL*EGQIHL
Trigger: GAGATGGATCTGCCCTTCGCACAATAAAATACGATT...AGAAACAAGTAGCCAAAGAAACTCTGTCACTTTGGTAACACCAGAACTTGCCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR GCA 90 bp GGTGTTACCAAAGTGACAGAGTTTCTTTGGCTACTTGTTTCTCTTAAAATACAAGAGTCTGGGGTTTTCTaGTCTTTGAACCGCCCTTTG +
Preference number: 4 (lower is better)
Translates to: GVTKVTEFLWLLVSLKIQESGVF*SLNRPL
Trigger: CAAAGGGCGGTTCAAAGAGCAGAAAACCCCAGACTC...TTGTATTTTAAGAGAAACAAGTAGCCAAAGAAACTCTGTCACTTTGGTAACACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR GCA 90 bp AAATTGCTACAGTTTGGGTCAAAGATTGAATTTTCAGCAAACTGCTTGGTAATCGAGTCTGGGGTTTTCTaGTCTTTGAACCGCCCTTTG +
Preference number: 4 (lower is better)
Translates to: KLLQFGSKIEFSANCLVIESGVF*SLNRPL
Trigger: CAAAGGGCGGTTCAAAGAGCAGAAAACCCCAGACTC...GATTACCAAGCAGTTTGCTGAAAATTCAATCTTTGACCCAAACTGTAGCAATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR GCA 90 bp GCTACATGTGGCAAGTTCTGGTGTTACCAAAGTGACAGAGTTTCTTTGGCTACTTTTGGGTCATTTAGATaGTTCAGGAGATCATTGAGA +
Preference number: 4 (lower is better)
Translates to: ATCGKFWCYQSDRVSLATFGSFR*FRRSLR
Trigger: TCTCAATGATCTCCTGAAGCATCTAAATGACCCAAA...AGTAGCCAAAGAAACTCTGTCACTTTGGTAACACCAGAACTTGCCACATGTAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR GCA 90 bp CACAGAATGGCAGTCTACATTGAACCCATTTTCAAGTATTTGTTCAGTCTTCTGCTGACAGATGTGGTTTaGGGAACAAAGGAAGGCTTT +
Preference number: 4 (lower is better)
Translates to: HRMAVYIEPIFKYLFSLLLTDVV*GTKEGF
Trigger: AAAGCCTTCCTTTGTTCCGCAAACCACATCTGTCAG...CAGAAGACTGAACAAATACTTGAAAATGGGTTCAATGTAGACTGCCATTCTGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CCA 90 bp CACAGAATGGCAGTCTACATTGAACCCATTTTCAAGTATTTGTTCAGTCTTCTGGGCATGAAGGAAGTGTaGTTCTTTGATCCACTTGGA +
Preference number: 4 (lower is better)
Translates to: HRMAVYIEPIFKYLFSLLGMKEV*FFDPLG
Trigger: TCCAAGTGGATCAAAGAACCACACTTCCTTCATGCC...CAGAAGACTGAACAAATACTTGAAAATGGGTTCAATGTAGACTGCCATTCTGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CCA 90 bp GCAAACAACATTGTTGGTGGCAGATGTGTAGTGCTTATTGTTGGTTGGTTTAATGGCATGAAGGAAGTGTaGTTCTTTGATCCACTTGGA +
Preference number: 4 (lower is better)
Translates to: ANNIVGGRCVVLIVGWFNGMKEV*FFDPLG
Trigger: TCCAAGTGGATCAAAGAACCACACTTCCTTCATGCC...ATTAAACCAACCAACAATAAGCACTACACATCTGCCACCAACAATGTTGTTTGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103241.8
CDS-3UTR CCA 90 bp GCTACATGTGGCAAGTTCTGGTGTTACCAAAGTGACAGAGTTTCTTTGGCTACTAGTTTCCATATTCTATaGCATGAAGGAAGTGTGGTT +
Preference number: 4 (lower is better)
Translates to: ATCGKFWCYQSDRVSLATSFHIL*HEGSVV
Trigger: AACCACACTTCCTTCATGCCATAGAATATGGAAACT...AGTAGCCAAAGAAACTCTGTCACTTTGGTAACACCAGAACTTGCCACATGTAGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CCA 90 bp GGTGTTACCAAAGTGACAGAGTTTCTTTGGCTACTTGTTTCTCTTAAAATACAAGCCAGGCCTTGGTTTTaGTACTTTGTCTTCGGGAAC +
Preference number: 4 (lower is better)
Translates to: GVTKVTEFLWLLVSLKIQARPWF*YFVFGN
Trigger: GTTCCCGAAGACAAAGTACCAAAACCAAGGCCTGGC...TTGTATTTTAAGAGAAACAAGTAGCCAAAGAAACTCTGTCACTTTGGTAACACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CCA 90 bp CACAGAATGGCAGTCTACATTGAACCCATTTTCAAGTATTTGTTCAGTCTTCTGTGTGGACCATCTGATTaGATTCTCCAGACTGGACTT +
Preference number: 4 (lower is better)
Translates to: HRMAVYIEPIFKYLFSLLCGPSD*ILQTGL
Trigger: AAGTCCAGTCTGGAGAATCCAATCAGATGGTCCACA...CAGAAGACTGAACAAATACTTGAAAATGGGTTCAATGTAGACTGCCATTCTGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CCA 90 bp GCAAACAACATTGTTGGTGGCAGATGTGTAGTGCTTATTGTTGGTTGGTTTAATTATTGTAGTCGTGAGTaGCGTTTGGAAGAACGATGG +
Preference number: 4 (lower is better)
Translates to: ANNIVGGRCVVLIVGWFNYCSRE*RLEERW
Trigger: CCATCGTTCTTCCAAACGCCACTCACGACTACAATA...ATTAAACCAACCAACAATAAGCACTACACATCTGCCACCAACAATGTTGTTTGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103241.8
CDS-3UTR CCA 90 bp CACAGAATGGCAGTCTACATTGAACCCATTTTCAAGTATTTGTTCAGTCTTCTGTTCTTTTCGGCTTTGTaGGCATTCGAGTTGGAGAAG +
Preference number: 4 (lower is better)
Translates to: HRMAVYIEPIFKYLFSLLFFSAL*AFELEK
Trigger: CTTCTCCAACTCGAATGCCCACAAAGCCGAAAAGAA...CAGAAGACTGAACAAATACTTGAAAATGGGTTCAATGTAGACTGCCATTCTGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CCA 90 bp GGTGTTACCAAAGTGACAGAGTTTCTTTGGCTACTTGTTTCTCTTAAAATACAATATTTCTGGGGAGTGTaGAGGGAGGGGAGTATAGAG +
Preference number: 4 (lower is better)
Translates to: GVTKVTEFLWLLVSLKIQYFWGV*REGSIE
Trigger: CTCTATACTCCCCTCCCTCCACACTCCCCAGAAATA...TTGTATTTTAAGAGAAACAAGTAGCCAAAGAAACTCTGTCACTTTGGTAACACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CCA 90 bp AAATTGCTACAGTTTGGGTCAAAGATTGAATTTTCAGCAAACTGCTTGGTAATCTATTTCTGGGGAGTGTaGAGGGAGGGGAGTATAGAG +
Preference number: 4 (lower is better)
Translates to: KLLQFGSKIEFSANCLVIYFWGV*REGSIE
Trigger: CTCTATACTCCCCTCCCTCCACACTCCCCAGAAATA...GATTACCAAGCAGTTTGCTGAAAATTCAATCTTTGACCCAAACTGTAGCAATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR TCA 90 bp GCAAACAACATTGTTGGTGGCAGATGTGTAGTGCTTATTGTTGGTTGGTTTAATCCATATTCTATGGCATaGAGGAAGTGTGGTTCTTTG +
Preference number: 4 (lower is better)
Translates to: ANNIVGGRCVVLIVGWFNPYSMA*RKCGSL
Trigger: CAAAGAACCACACTTCCTTCATGCCATAGAATATGG...ATTAAACCAACCAACAATAAGCACTACACATCTGCCACCAACAATGTTGTTTGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103241.8
CDS-3UTR TCA 90 bp CACAGAATGGCAGTCTACATTGAACCCATTTTCAAGTATTTGTTCAGTCTTCTGCCATATTCTATGGCATaGAGGAAGTGTGGTTCTTTG +
Preference number: 4 (lower is better)
Translates to: HRMAVYIEPIFKYLFSLLPYSMA*RKCGSL
Trigger: CAAAGAACCACACTTCCTTCATGCCATAGAATATGG...CAGAAGACTGAACAAATACTTGAAAATGGGTTCAATGTAGACTGCCATTCTGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR TCA 90 bp CACAGAATGGCAGTCTACATTGAACCCATTTTCAAGTATTTGTTCAGTCTTCTGCAGAGCCAACAAAGATaGCTGTGTAGTTTTGGTATG +
Preference number: 4 (lower is better)
Translates to: HRMAVYIEPIFKYLFSLLQSQQR*LCSFGM
Trigger: CATACCAAAACTACACAGTCATCTTTGTTGGCTCTG...CAGAAGACTGAACAAATACTTGAAAATGGGTTCAATGTAGACTGCCATTCTGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR TCA 90 bp GGTGTTACCAAAGTGACAGAGTTTCTTTGGCTACTTGTTTCTCTTAAAATACAATTCATGTGGACCATCTaGTTGGATTCTCCAGACTGG +
Preference number: 4 (lower is better)
Translates to: GVTKVTEFLWLLVSLKIQFMWTI*LDSPDW
Trigger: CCAGTCTGGAGAATCCAATCAGATGGTCCACATGAA...TTGTATTTTAAGAGAAACAAGTAGCCAAAGAAACTCTGTCACTTTGGTAACACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR TCA 90 bp GGTGTTACCAAAGTGACAGAGTTTCTTTGGCTACTTGTTTCTCTTAAAATACAAACTTGTTCAGTGGTCTaGCAGATGTGGTTTGCGGAA +
Preference number: 4 (lower is better)
Translates to: GVTKVTEFLWLLVSLKIQTCSVV*QMWFAE
Trigger: TTCCGCAAACCACATCTGTCAGACCACTGAACAAGT...TTGTATTTTAAGAGAAACAAGTAGCCAAAGAAACTCTGTCACTTTGGTAACACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR GCA 90 bp GTGGCAAGTTCTGGTGTTACCAAAGTGACAGAGTTTCTTTGGCTACTTGTTTCTTGGCATTCATCTTTATaGTTGCCTTTCATAGCACAA +
Preference number: 4 (lower is better)
Translates to: VASSGVTKVTEFLWLLVSWHSSL*LPFIAQ
Trigger: TTGTGCTATGAAAGGCAAGCATAAAGATGAATGCCA...AGAAACAAGTAGCCAAAGAAACTCTGTCACTTTGGTAACACCAGAACTTGCCAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR GCA 90 bp CTACATGTGGCAAGTTCTGGTGTTACCAAAGTGACAGAGTTTCTTTGGCTACTTTGGCATTCATCTTTATaGTTGCCTTTCATAGCACAA +
Preference number: 4 (lower is better)
Translates to: LHVASSGVTKVTEFLWLLWHSSL*LPFIAQ
Trigger: TTGTGCTATGAAAGGCAAGCATAAAGATGAATGCCA...AAGTAGCCAAAGAAACTCTGTCACTTTGGTAACACCAGAACTTGCCACATGTAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR GCA 90 bp GGTGTTACCAAAGTGACAGAGTTTCTTTGGCTACTTGTTTCTCTTAAAATACAATTTGTCTTCGGGAACTaGTGTCCAAACAGAGTCTGG +
Preference number: 4 (lower is better)
Translates to: GVTKVTEFLWLLVSLKIQFVFGN*CPNRVW
Trigger: CCAGACTCTGTTTGGACAGCAGTTCCCGAAGACAAA...TTGTATTTTAAGAGAAACAAGTAGCCAAAGAAACTCTGTCACTTTGGTAACACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR GCA 90 bp CACAGAATGGCAGTCTACATTGAACCCATTTTCAAGTATTTGTTCAGTCTTCTGGGTCACGTGATGCAATaGAAGACTTTTTACACGATC +
Preference number: 4 (lower is better)
Translates to: HRMAVYIEPIFKYLFSLLGHVMQ*KTFYTI
Trigger: GATCGTGTAAAAAGTCTTGCATTGCATCACGTGACC...CAGAAGACTGAACAAATACTTGAAAATGGGTTCAATGTAGACTGCCATTCTGTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CCA 90 bp GCTACATGTGGCAAGTTCTGGTGTTACCAAAGTGACAGAGTTTCTTTGGCTACTCATCTCATCATTTCTTaGGACAAAGACTTTGATGAA +
Preference number: 4 (lower is better)
Translates to: ATCGKFWCYQSDRVSLATHLIIS*DKDFDE
Trigger: TTCATCAAAGTCTTTGTCCCAAGAAATGATGAGATG...AGTAGCCAAAGAAACTCTGTCACTTTGGTAACACCAGAACTTGCCACATGTAGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CCA 90 bp GCAAACAACATTGTTGGTGGCAGATGTGTAGTGCTTATTGTTGGTTGGTTTAATGGAAATCAGCCACTGTaGCAGAATAGAGTTTTCCAT +
Preference number: 4 (lower is better)
Translates to: ANNIVGGRCVVLIVGWFNGNQPL*QNRVFH
Trigger: ATGGAAAACTCTATTCTGCCACAGTGGCTGATTTCC...ATTAAACCAACCAACAATAAGCACTACACATCTGCCACCAACAATGTTGTTTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103241.8
CDS-3UTR CCA 90 bp CTACATGTGGCAAGTTCTGGTGTTACCAAAGTGACAGAGTTTCTTTGGCTACTTAGTTTCCATATTCTATaGCATGAAGGAAGTGTGGTT +
Preference number: 4 (lower is better)
Translates to: LHVASSGVTKVTEFLWLLSFHIL*HEGSVV
Trigger: AACCACACTTCCTTCATGCCATAGAATATGGAAACT...AAGTAGCCAAAGAAACTCTGTCACTTTGGTAACACCAGAACTTGCCACATGTAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CCA 90 bp AAATTGCTACAGTTTGGGTCAAAGATTGAATTTTCAGCAAACTGCTTGGTAATCGAATCAATGTTCTGCTaGTATTCCTTGACGGGGCTG +
Preference number: 4 (lower is better)
Translates to: KLLQFGSKIEFSANCLVIESMFC*YSLTGL
Trigger: CAGCCCCGTCAAGGAATACCAGCAGAACATTGATTC...GATTACCAAGCAGTTTGCTGAAAATTCAATCTTTGACCCAAACTGTAGCAATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR GCA 90 bp CACAGAATGGCAGTCTACATTGAACCCATTTTCAAGTATTTGTTCAGTCTTCTGAATCGTATTTTATTGTaGGAAGGGCAGATCCATCTC +
Preference number: 4 (lower is better)
Translates to: HRMAVYIEPIFKYLFSLLNRILL*EGQIHL
Trigger: GAGATGGATCTGCCCTTCGCACAATAAAATACGATT...CAGAAGACTGAACAAATACTTGAAAATGGGTTCAATGTAGACTGCCATTCTGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR GCA 90 bp GGTGTTACCAAAGTGACAGAGTTTCTTTGGCTACTTGTTTCTCTTAAAATACAACTGACAGATGTGGTTTaGGGAACAAAGGAAGGCTTT +
Preference number: 4 (lower is better)
Translates to: GVTKVTEFLWLLVSLKIQLTDVV*GTKEGF
Trigger: AAAGCCTTCCTTTGTTCCGCAAACCACATCTGTCAG...TTGTATTTTAAGAGAAACAAGTAGCCAAAGAAACTCTGTCACTTTGGTAACACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CCA 90 bp CATGTGGCAAGTTCTGGTGTTACCAAAGTGACAGAGTTTCTTTGGCTACTTGTTCATCTCATCATTTCTTaGGACAAAGACTTTGATGAA +
Preference number: 4 (lower is better)
Translates to: HVASSGVTKVTEFLWLLVHLIIS*DKDFDE
Trigger: TTCATCAAAGTCTTTGTCCCAAGAAATGATGAGATG...AACAAGTAGCCAAAGAAACTCTGTCACTTTGGTAACACCAGAACTTGCCACATG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CCA 90 bp GGTGTTACCAAAGTGACAGAGTTTCTTTGGCTACTTGTTTCTCTTAAAATACAAGGCATGAAGGAAGTGTaGTTCTTTGATCCACTTGGA +
Preference number: 4 (lower is better)
Translates to: GVTKVTEFLWLLVSLKIQGMKEV*FFDPLG
Trigger: TCCAAGTGGATCAAAGAACCACACTTCCTTCATGCC...TTGTATTTTAAGAGAAACAAGTAGCCAAAGAAACTCTGTCACTTTGGTAACACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CCA 90 bp AAATTGCTACAGTTTGGGTCAAAGATTGAATTTTCAGCAAACTGCTTGGTAATCTTCTTTTCGGCTTTGTaGGCATTCGAGTTGGAGAAG +
Preference number: 4 (lower is better)
Translates to: KLLQFGSKIEFSANCLVIFFSAL*AFELEK
Trigger: CTTCTCCAACTCGAATGCCCACAAAGCCGAAAAGAA...GATTACCAAGCAGTTTGCTGAAAATTCAATCTTTGACCCAAACTGTAGCAATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR TCA 90 bp AAATTGCTACAGTTTGGGTCAAAGATTGAATTTTCAGCAAACTGCTTGGTAATCCCACGGCGATTTCTCTaGAGAAGAAATAGACATAGT +
Preference number: 4 (lower is better)
Translates to: KLLQFGSKIEFSANCLVIPRRFL*RRNRHS
Trigger: ACTATGTCTATTTCTTCTTCAGAGAAATCGCCGTGG...GATTACCAAGCAGTTTGCTGAAAATTCAATCTTTGACCCAAACTGTAGCAATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR TCA 90 bp CACAGAATGGCAGTCTACATTGAACCCATTTTCAAGTATTTGTTCAGTCTTCTGACCCTTTGGGATACCTaGTATAGTATCAGTAAAATC +
Preference number: 4 (lower is better)
Translates to: HRMAVYIEPIFKYLFSLLTLWDT*YSISKI
Trigger: GATTTTACTGATACTATATCAGGTATCCCAAAGGGT...CAGAAGACTGAACAAATACTTGAAAATGGGTTCAATGTAGACTGCCATTCTGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000077847.12
ENSMUST00000103239.10
CDS-3UTR GCA 90 bp GGTGTTACCAAAGTGACAGAGTTTCTTTGGCTACTTGTTTCTCTTAAAATACAAGGTCACGTGATGCAATaGAAGACTTTTTACACGATC +
Preference number: 4 (lower is better)
Translates to: GVTKVTEFLWLLVSLKIQGHVMQ*KTFYTI
Trigger: GATCGTGTAAAAAGTCTTGCATTGCATCACGTGACC...TTGTATTTTAAGAGAAACAAGTAGCCAAAGAAACTCTGTCACTTTGGTAACACC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CCA 90 bp GGTGTTACCAAAGTGACAGAGTTTCTTTGGCTACTTGTTTCTCTTAAAATACAAGGTTGCTGTAGAGTTTaGGAGAATCAATGTTCTGCT +
Preference number: 4 (lower is better)
Translates to: GVTKVTEFLWLLVSLKIQGCCRV*ENQCSA
Trigger: AGCAGAACATTGATTCTCCCAAACTCTACAGCAACC...TTGTATTTTAAGAGAAACAAGTAGCCAAAGAAACTCTGTCACTTTGGTAACACC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CCA 90 bp GGTGTTACCAAAGTGACAGAGTTTCTTTGGCTACTTGTTTCTCTTAAAATACAATGTGGGCATTCGAGTTaGAGAAGGATGTATTGTAGT +
Preference number: 4 (lower is better)
Translates to: GVTKVTEFLWLLVSLKIQCGHSS*RRMYCS
Trigger: ACTACAATACATCCTTCTCCAACTCGAATGCCCACA...TTGTATTTTAAGAGAAACAAGTAGCCAAAGAAACTCTGTCACTTTGGTAACACC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR GCA 90 bp AAATTGCTACAGTTTGGGTCAAAGATTGAATTTTCAGCAAACTGCTTGGTAATCAATCGTATTTTATTGTaGGAAGGGCAGATCCATCTC +
Preference number: 4 (lower is better)
Translates to: KLLQFGSKIEFSANCLVINRILL*EGQIHL
Trigger: GAGATGGATCTGCCCTTCGCACAATAAAATACGATT...GATTACCAAGCAGTTTGCTGAAAATTCAATCTTTGACCCAAACTGTAGCAATTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CCA 90 bp GGTGTTACCAAAGTGACAGAGTTTCTTTGGCTACTTGTTTCTCTTAAAATACAAGGTATCACCTCTGTTTaGGGGATTTCATTTAAGTTC +
Preference number: 4 (lower is better)
Translates to: GVTKVTEFLWLLVSLKIQGITSV*GISFKF
Trigger: GAACTTAAATGAAATCCCCCAAACAGAGGTGATACC...TTGTATTTTAAGAGAAACAAGTAGCCAAAGAAACTCTGTCACTTTGGTAACACC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CCA 90 bp GCAAACAACATTGTTGGTGGCAGATGTGTAGTGCTTATTGTTGGTTGGTTTAATCATCTCATCATTTCTTaGGACAAAGACTTTGATGAA +
Preference number: 4 (lower is better)
Translates to: ANNIVGGRCVVLIVGWFNHLIIS*DKDFDE
Trigger: TTCATCAAAGTCTTTGTCCCAAGAAATGATGAGATG...ATTAAACCAACCAACAATAAGCACTACACATCTGCCACCAACAATGTTGTTTGC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103241.8
CDS-3UTR CCA 90 bp AAATTGCTACAGTTTGGGTCAAAGATTGAATTTTCAGCAAACTGCTTGGTAATCTTTAGATGTAATTTCTaGGCTACTTGCCACAGTGGT +
Preference number: 4 (lower is better)
Translates to: KLLQFGSKIEFSANCLVIFRCNF*ATCHSG
Trigger: ACCACTGTGGCAAGTAGCCCAGAAATTACATCTAAA...GATTACCAAGCAGTTTGCTGAAAATTCAATCTTTGACCCAAACTGTAGCAATTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000077847.12
ENSMUST00000103239.10
ENSMUST00000103240.9
CDS-3UTR CCA 90 bp AAATTGCTACAGTTTGGGTCAAAGATTGAATTTTCAGCAAACTGCTTGGTAATCCTCCATGTCAGATGTTaGACCGCCAAATATTTTGTA +
Preference number: 4 (lower is better)
Translates to: KLLQFGSKIEFSANCLVILHVRC*TAKYFV
Trigger: TACAAAATATTTGGCGGTCCAACATCTGACATGGAG...GATTACCAAGCAGTTTGCTGAAAATTCAATCTTTGACCCAAACTGTAGCAATTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000103239.10
ENSMUST00000103240.9
CDS-3UTR GCA 90 bp AAATTGCTACAGTTTGGGTCAAAGATTGAATTTTCAGCAAACTGCTTGGTAATCTGGCATTCATCTTTATaGTTGCCTTTCATAGCACAA +
Preference number: 4 (lower is better)
Translates to: KLLQFGSKIEFSANCLVIWHSSL*LPFIAQ
Trigger: TTGTGCTATGAAAGGCAAGCATAAAGATGAATGCCA...GATTACCAAGCAGTTTGCTGAAAATTCAATCTTTGACCCAAACTGTAGCAATTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR GCA 90 bp AAATTGCTACAGTTTGGGTCAAAGATTGAATTTTCAGCAAACTGCTTGGTAATCTTTGGGTCATTTAGATaGTTCAGGAGATCATTGAGA +
Preference number: 4 (lower is better)
Translates to: KLLQFGSKIEFSANCLVIFGSFR*FRRSLR
Trigger: TCTCAATGATCTCCTGAAGCATCTAAATGACCCAAA...GATTACCAAGCAGTTTGCTGAAAATTCAATCTTTGACCCAAACTGTAGCAATTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR GCA 90 bp GGTGTTACCAAAGTGACAGAGTTTCTTTGGCTACTTGTTTCTCTTAAAATACAATTTGGGTCATTTAGATaGTTCAGGAGATCATTGAGA +
Preference number: 4 (lower is better)
Translates to: GVTKVTEFLWLLVSLKIQFGSFR*FRRSLR
Trigger: TCTCAATGATCTCCTGAAGCATCTAAATGACCCAAA...TTGTATTTTAAGAGAAACAAGTAGCCAAAGAAACTCTGTCACTTTGGTAACACC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CCA 90 bp AAATTGCTACAGTTTGGGTCAAAGATTGAATTTTCAGCAAACTGCTTGGTAATCAGTTTCCATATTCTATaGCATGAAGGAAGTGTGGTT +
Preference number: 4 (lower is better)
Translates to: KLLQFGSKIEFSANCLVISFHIL*HEGSVV
Trigger: AACCACACTTCCTTCATGCCATAGAATATGGAAACT...GATTACCAAGCAGTTTGCTGAAAATTCAATCTTTGACCCAAACTGTAGCAATTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS CCA 90 bp TGGCCTGCAGGGTCTTCTGGTGGAGGACAGGTGTGGATTCCGGCGTaGGGAGAGCAGCCAGCTCGGGAGGCTGGCCTCTGTGGTCCACGG +
Preference number: 5 (lower is better)
Translates to: WPAGSSGGGQVWIPA*GEQPAREAGLCGPR
Trigger: CCGTGGACCACAGAGGCCAGCCTCCCGAGCTGGCTGCTCTCCCCACGCCGGAATCCACACCTGTCCTCCACCAGAAGACCCTGCAGGCCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103238.2
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS CCA 90 bp GATTCCGGCGTGGGGAGAGCAGCCAGCTCGGGAGGCTGGCCTCTGTaGTCCACGGCCATGGACTTTGTATCCGTGTTTGGTGGCAGTTCC +
Preference number: 5 (lower is better)
Translates to: DSGVGRAASSGGWPL*STAMDFVSVFGGSS
Trigger: GGAACTGCCACCAAACACGGATACAAAGTCCATGGCCGTGGACCACAGAGGCCAGCCTCCCGAGCTGGCTGCTCTCCCCACGCCGGAATC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103238.2
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CAA 90 bp GCAAGGGTGGGTGCTGCTTCTGATCCTGGAGGGAAGGGGCGGCGTTGCTCAACATCTGCGAGGCCGTGTTaGGCACAACAGCCAGGCCTT +
Preference number: 5 (lower is better)
Translates to: ARVGAASDPGGKGRRCSTSARPC*AQQPGL
Trigger: AAGGCCTGGCTGTTGTGCCAAACACGGCCTCGCAGA...TGTTGAGCAACGCCGCCCCTTCCCTCCAGGATCAGAAGCAGCACCCACCCTTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103241.8
CDS-3UTR CAA 90 bp GCAAGGGTGGGTGCTGCTTCTGATCCTGGAGGGAAGGGGCGGCGTTGCTCAACATCCCGGTTAGGGACCTaGGGTGGGACCTCAGCCATT +
Preference number: 5 (lower is better)
Translates to: ARVGAASDPGGKGRRCSTSRLGT*GGTSAI
Trigger: AATGGCTGAGGTCCCACCCAAGGTCCCTAACCGGGA...TGTTGAGCAACGCCGCCCCTTCCCTCCAGGATCAGAAGCAGCACCCACCCTTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103241.8
CDS CCA 90 bp GGAGAGCAGCCAGCTCGGGAGGCTGGCCTCTGTGGTCCACGGCCATaGACTTTGTATCCGTGTTTGGTGGCAGTTCCTTCCGACTGGTCA +
Preference number: 5 (lower is better)
Translates to: GEQPAREAGLCGPRP*TLYPCLVAVPSDWS
Trigger: TGACCAGTCGGAAGGAACTGCCACCAAACACGGATACAAAGTCCATGGCCGTGGACCACAGAGGCCAGCCTCCCGAGCTGGCTGCTCTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103238.2
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS GCA 90 bp CCGTGGCAGTCCCCTAGGTGGGCTGTGTTGCCGTACTCCGTGTCCTaGTCATATCCTCCAGGGAGCATCCCTAGGGTCACTCTCTCACAA +
Preference number: 5 (lower is better)
Translates to: PWQSPRWAVLPYSVS*SYPPGSIPRVTLSQ
Trigger: TTGTGAGAGAGTGACCCTAGGGATGCTCCCTGGAGGATATGAGCAGGACACGGAGTACGGCAACACAGCCCACCTAGGGGACTGCCACGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076335.12
ENSMUST00000103241.8
CDS CCA 90 bp GTCCCGTCCTGGGGAGGGTGCCATTACTGGTATAGCTGCTCTGTCTaGAGAGGGAGGGCTGCAGATGAACACTCACCGGTGTCCCCTGAA +
Preference number: 5 (lower is better)
Translates to: VPSWGGCHYWYSCSV*RGRAADEHSPVSPE
Trigger: TTCAGGGGACACCGGTGAGTGTTCATCTGCAGCCCTCCCTCTCCAGACAGAGCAGCTATACCAGTAATGGCACCCTCCCCAGGACGGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103238.2
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CAA 90 bp GGAATGTTTATCATGGCAAGGGTGGGTGCTGCTTCTGATCCTGGAGGGAAGGGGGTGGGACCTCAGCCATaGGTCCCACCGGGTCCAGCA +
Preference number: 5 (lower is better)
Translates to: GMFIMARVGAASDPGGKGVGPQP*VPPGPA
Trigger: TGCTGGACCCGGTGGGACCAATGGCTGAGGTCCCAC...CCCCTTCCCTCCAGGATCAGAAGCAGCACCCACCCTTGCCATGATAAACATTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103241.8
CDS-3UTR CAA 90 bp GCAAGGGTGGGTGCTGCTTCTGATCCTGGAGGGAAGGGGCGGCGTTGCTCAACATTTCCAGAGAAGTCATaGGCACCCCAGGAGTGGTGG +
Preference number: 5 (lower is better)
Translates to: ARVGAASDPGGKGRRCSTFPEKS*APQEWW
Trigger: CCACCACTCCTGGGGTGCCAATGACTTCTCTGGAAA...TGTTGAGCAACGCCGCCCCTTCCCTCCAGGATCAGAAGCAGCACCCACCCTTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103241.8
CDS TCA 90 bp GGACCTTGGGTGGGACCTCAGCCATTGGTCCCACCGGGTCCAGCATaGGGGTTTGATGAGCCATATGGATCTCTCCCAGGATGGCTTTGG +
Preference number: 5 (lower is better)
Translates to: GPWVGPQPLVPPGPA*GFDEPYGSLPGWLW
Trigger: CCAAAGCCATCCTGGGAGAGATCCATATGGCTCATCAAACCCTCATGCTGGACCCGGTGGGACCAATGGCTGAGGTCCCACCCAAGGTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103238.2
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS GCA 90 bp TCGTGGCAGTCCCCTAGGTGGGCTGTGTTGCCGTACTCCGTGTCCTaGTCATATCCTCCAGGGAGCATCCCTAGGGTCACTCTCTCACAA +
Preference number: 5 (lower is better)
Translates to: SWQSPRWAVLPYSVS*SYPPGSIPRVTLSQ
Trigger: TTGTGAGAGAGTGACCCTAGGGATGCTCCCTGGAGGATATGAGCAGGACACGGAGTACGGCAACACAGCCCACCTAGGGGACTGCCACGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000077847.12
ENSMUST00000103238.2
ENSMUST00000103239.10
ENSMUST00000103240.9
CDS CCA 90 bp CAGGGCTCATCGGCAATGGGTGGGACGGCAGAGTCCATCAGCGGGTaGGACTTGATGAAAGCCAGGGTGTCATCTGGAAAGTCGATGGAG +
Preference number: 5 (lower is better)
Translates to: QGSSAMGGTAESISG*DLMKARVSSGKSME
Trigger: CTCCATCGACTTTCCAGATGACACCCTGGCTTTCATCAAGTCCCACCCGCTGATGGACTCTGCCGTCCCACCCATTGCCGATGAGCCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103238.2
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS CCA 90 bp GTACCTGACCCGTGTCTTTGTGAACCAGGGCTCATCGGCAATGGGTaGGACGGCAGAGTCCATCAGCGGGTGGGACTTGATGAAAGCCAG +
Preference number: 5 (lower is better)
Translates to: VPDPCLCEPGLIGNG*DGRVHQRVGLDESQ
Trigger: CTGGCTTTCATCAAGTCCCACCCGCTGATGGACTCTGCCGTCCCACCCATTGCCGATGAGCCCTGGTTCACAAAGACACGGGTCAGGTAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103238.2
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CAA 90 bp GCAAGGGTGGGTGCTGCTTCTGATCCTGGAGGGAAGGGGCGGCGTTGCTCAACAGCAAAGAGGGCGACATaGGTTTGTCGGGCATCAAAC +
Preference number: 5 (lower is better)
Translates to: ARVGAASDPGGKGRRCSTAKRAT*VCRASN
Trigger: GTTTGATGCCCGACAAACCAATGTCGCCCTCTTTGC...TGTTGAGCAACGCCGCCCCTTCCCTCCAGGATCAGAAGCAGCACCCACCCTTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103241.8
CDS-3UTR CAA 90 bp AATGGAGTGAGCAGGACCTCCCTTCGTTTCCGGCAAGTACACAGAAGCCTTGCTGTGGGACCTCAGCCATaGGTCCCACCGGGTCCAGCA +
Preference number: 5 (lower is better)
Translates to: NGVSRTSLRFRQVHRSLAVGPQP*VPPGPA
Trigger: TGCTGGACCCGGTGGGACCAATGGCTGAGGTCCCAC...AGCAAGGCTTCTGTGTACTTGCCGGAAACGAAGGGAGGTCCTGCTCACTCCATT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CAA 90 bp TCTGATCCTGGAGGGAAGGGGCGGCGTTGCTCAACAACAAATCGCTCTAGGTGGTCCCGGTTAGGGACCTaGGGTGGGACCTCAGCCATT +
Preference number: 5 (lower is better)
Translates to: SDPGGKGRRCSTTNRSRWSRLGT*GGTSAI
Trigger: AATGGCTGAGGTCCCACCCAAGGTCCCTAACCGGGA...CCACCTAGAGCGATTTGTTGTTGAGCAACGCCGCCCCTTCCCTCCAGGATCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103241.8
CDS-3UTR CAA 90 bp ATCCTGGAGGGAAGGGGCGGCGTTGCTCAACAACAAATCGCTCTAGGTGGCTTTCCACCTTCGCCCCTGTaGGGGTGGGCATATAGCCTC +
Preference number: 5 (lower is better)
Translates to: ILEGRGGVAQQQIALGGFPPSPL*GWAYSL
Trigger: GAGGCTATATGCCCACCCCAACAGGGGCGAAGGTGG...AAAGCCACCTAGAGCGATTTGTTGTTGAGCAACGCCGCCCCTTCCCTCCAGGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103241.8
CDS GCA 90 bp TCCTCTTTAGTCCCGTCCTGGGGAGGGTGCCATTACTGGTATAGCTaGTCTGTCTGGAGAGGGAGGGCTGCAGATGAACACTCACCGGTG +
Preference number: 5 (lower is better)
Translates to: SSLVPSWGGCHYWYS*SVWRGRAADEHSPV
Trigger: CACCGGTGAGTGTTCATCTGCAGCCCTCCCTCTCCAGACAGAGCAGCTATACCAGTAATGGCACCCTCCCCAGGACGGGACTAAAGAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103238.2
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS GCA 90 bp ATGAGGATACCTCCATGTCGTGGCAGTCCCCTAGGTGGGCTGTGTTaGCGTACTCCGTGTCCTGCTCATATCCTCCAGGGAGCATCCCTA +
Preference number: 5 (lower is better)
Translates to: MRIPPCRGSPLGGLC*RTPCPAHILQGASL
Trigger: TAGGGATGCTCCCTGGAGGATATGAGCAGGACACGGAGTACGGCAACACAGCCCACCTAGGGGACTGCCACGACATGGAGGTATCCTCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000077847.12
ENSMUST00000103238.2
CDS-3UTR CAA 90 bp GTACCCTCACAGCTTCCTCGCAACAGCAGGGACAGGATAAAGCCACACGGGAATTCTGCGAGGCCGTGTTaGGCACAACAGCCAGGCCTT +
Preference number: 5 (lower is better)
Translates to: VPSQLPRNSRDRIKPHGNSARPC*AQQPGL
Trigger: AAGGCCTGGCTGTTGTGCCAAACACGGCCTCGCAGA...ATTCCCGTGTGGCTTTATCCTGTCCCTGCTGTTGCGAGGAAGCTGTGAGGGTAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CAA 90 bp GTGAGCAGGACCTCCCTTCGTTTCCGGCAAGTACACAGAAGCCTTGCTGTAGTACCACCTTCGCCCCTGTaGGGGTGGGCATATAGCCTC +
Preference number: 5 (lower is better)
Translates to: VSRTSLRFRQVHRSLAVVPPSPL*GWAYSL
Trigger: GAGGCTATATGCCCACCCCAACAGGGGCGAAGGTGG...TACTACAGCAAGGCTTCTGTGTACTTGCCGGAAACGAAGGGAGGTCCTGCTCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS GCA 90 bp TTGAAGGAGGCAAACTTTCGTGGCAGTCCCCTAGGTGGGCTGTGTTaGCGTACTCCGTGTCCTGCTCATATCCTCCAGGGAGCATCCCTA +
Preference number: 5 (lower is better)
Translates to: LKEANFRGSPLGGLC*RTPCPAHILQGASL
Trigger: TAGGGATGCTCCCTGGAGGATATGAGCAGGACACGGAGTACGGCAACACAGCCCACCTAGGGGACTGCCACGAAAGTTTGCCTCCTTCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000103239.10
ENSMUST00000103240.9
CDS CCA 90 bp CTGGCCTCTGTGGTCCACGGCCATGGACTTTGTATCCGTGTTTGGTaGCAGTTCCTTCCGACTGGTCAGCAGGTTGCTGTAGAGTTTGGG +
Preference number: 5 (lower is better)
Translates to: LASVVHGHGLCIRVW*QFLPTGQQVAVEFG
Trigger: CCCAAACTCTACAGCAACCTGCTGACCAGTCGGAAGGAACTGCCACCAAACACGGATACAAAGTCCATGGCCGTGGACCACAGAGGCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103238.2
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS CCA 90 bp AGGATGGTGTCCTCTTTAGTCCCGTCCTGGGGAGGGTGCCATTACTaGTATAGCTGCTCTGTCTGGAGAGGGAGGGCTGCAGATGAACAC +
Preference number: 5 (lower is better)
Translates to: RMVSSLVPSWGGCHY*YSCSVWRGRAADEH
Trigger: GTGTTCATCTGCAGCCCTCCCTCTCCAGACAGAGCAGCTATACCAGTAATGGCACCCTCCCCAGGACGGGACTAAAGAGGACACCATCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103238.2
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CAA 90 bp GTACCCTCACAGCTTCCTCGCAACAGCAGGGACAGGATAAAGCCACACGGGAATCTGTGCTGCGATTCGTaGCCTGAAGGGCGTCCTCTA +
Preference number: 5 (lower is better)
Translates to: VPSQLPRNSRDRIKPHGNLCCDS*PEGRPL
Trigger: TAGAGGACGCCCTTCAGGCAACGAATCGCAGCACAG...ATTCCCGTGTGGCTTTATCCTGTCCCTGCTGTTGCGAGGAAGCTGTGAGGGTAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CAA 90 bp GGAATGTTTATCATGGCAAGGGTGGGTGCTGCTTCTGATCCTGGAGGGAAGGGGCTGTGCTGCGATTCGTaGCCTGAAGGGCGTCCTCTA +
Preference number: 5 (lower is better)
Translates to: GMFIMARVGAASDPGGKGLCCDS*PEGRPL
Trigger: TAGAGGACGCCCTTCAGGCAACGAATCGCAGCACAG...CCCCTTCCCTCCAGGATCAGAAGCAGCACCCACCCTTGCCATGATAAACATTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103241.8
CDS-3UTR CAA 90 bp CTTCCCTGGCTACACATCCCTTCTGCTTCAAACGAAAGAAATGGAGTGAGCAGGGTGGGACCTCAGCCATaGGTCCCACCGGGTCCAGCA +
Preference number: 5 (lower is better)
Translates to: LPWLHIPSASNERNGVSRVGPQP*VPPGPA
Trigger: TGCTGGACCCGGTGGGACCAATGGCTGAGGTCCCAC...CCTGCTCACTCCATTTCTTTCGTTTGAAGCAGAAGGGATGTGTAGCCAGGGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CAA 90 bp AGTGAGCAGGACCTCCCTTCGTTTCCGGCAAGTACACAGAAGCCTTGCTGTAGTTCCCGGTTAGGGACCTaGGGTGGGACCTCAGCCATT +
Preference number: 5 (lower is better)
Translates to: SEQDLPSFPASTQKPCCSSRLGT*GGTSAI
Trigger: AATGGCTGAGGTCCCACCCAAGGTCCCTAACCGGGA...ACTACAGCAAGGCTTCTGTGTACTTGCCGGAAACGAAGGGAGGTCCTGCTCACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CAA 90 bp TCTGATCCTGGAGGGAAGGGGCGGCGTTGCTCAACAACAAATCGCTCTAGGTGGTTTCCAGAGAAGTCATaGGCACCCCAGGAGTGGTGG +
Preference number: 5 (lower is better)
Translates to: SDPGGKGRRCSTTNRSRWFPEKS*APQEWW
Trigger: CCACCACTCCTGGGGTGCCAATGACTTCTCTGGAAA...CCACCTAGAGCGATTTGTTGTTGAGCAACGCCGCCCCTTCCCTCCAGGATCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103241.8
CDS-3UTR CAA 90 bp CCCCCAAGTAATGCAGACCATGGTCACTGTCCCAAGATATCACTTGAACTCCGCCCACCTTCGCCCCTGTaGGGGTGGGCATATAGCCTC +
Preference number: 5 (lower is better)
Translates to: PPSNADHGHCPKISLELRPPSPL*GWAYSL
Trigger: GAGGCTATATGCCCACCCCAACAGGGGCGAAGGTGG...GCGGAGTTCAAGTGATATCTTGGGACAGTGACCATGGTCTGCATTACTTGGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103241.8
CDS-3UTR CAA 90 bp GCAAGGGTGGGTGCTGCTTCTGATCCTGGAGGGAAGGGGCGGCGTTGCTCAACATCTGACAGATGTGGTTaGCGGAACAAAGGAAGGCTT +
Preference number: 5 (lower is better)
Translates to: ARVGAASDPGGKGRRCSTSDRCG*RNKGRL
Trigger: AAGCCTTCCTTTGTTCCGCAAACCACATCTGTCAGA...TGTTGAGCAACGCCGCCCCTTCCCTCCAGGATCAGAAGCAGCACCCACCCTTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103241.8
CDS GCA 90 bp CAGGTTTTAAGGATGGTGTCCTCTTTAGTCCCGTCCTGGGGAGGGTaGCATTACTGGTATAGCTGCTCTGTCTGGAGAGGGAGGGCTGCA +
Preference number: 5 (lower is better)
Translates to: QVLRMVSSLVPSWGG*HYWYSCSVWRGRAA
Trigger: TGCAGCCCTCCCTCTCCAGACAGAGCAGCTATACCAGTAATGGCACCCTCCCCAGGACGGGACTAAAGAGGACACCATCCTTAAAACCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103238.2
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS GCA 90 bp TTGAAGGAGGCAAACTTTCGTGGCAGTCCCCTAGGTGGGCTGTGTTaGCGTACTCCGTGTCCTGCTCATATCCTCCAGGGCTGTGGTTAT +
Preference number: 5 (lower is better)
Translates to: LKEANFRGSPLGGLC*RTPCPAHILQGCGY
Trigger: ATAACCACAGCCCTGGAGGATATGAGCAGGACACGGAGTACGGCAACACAGCCCACCTAGGGGACTGCCACGAAAGTTTGCCTCCTTCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000078621.12
CDS CCA 90 bp AGGCCGTTCAGCTTGGCGAAGCTTCCGCTGGAGTCTGTGCACGACTaGGCGGATTCTGCGTCTTTATGGATCTTTCTGTTCTTCCGAACG +
Preference number: 5 (lower is better)
Translates to: RPFSLAKLPLESVHD*ADSASLWIFLFFRT
Trigger: CGTTCGGAAGAACAGAAAGATCCATAAAGACGCAGAATCCGCCCAGTCGTGCACAGACTCCAGCGGAAGCTTCGCCAAGCTGAACGGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103238.2
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS CCA 90 bp AGGCTGGCCTCTGTGGTCCACGGCCATGGACTTTGTATCCGTGTTTaGTGGCAGTTCCTTCCGACTGGTCAGCAGGTTGCTGTAGAGTTT +
Preference number: 5 (lower is better)
Translates to: RLASVVHGHGLCIRV*WQFLPTGQQVAVEF
Trigger: AAACTCTACAGCAACCTGCTGACCAGTCGGAAGGAACTGCCACCAAACACGGATACAAAGTCCATGGCCGTGGACCACAGAGGCCAGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103238.2
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS CCA 90 bp AACACTCACCGGTGTCCCCTGAATATAGTCCACCTTCGCCCCTGTTaGGGTGGGCATATAGCCTCCACGGTTCATACTCGGCTGTCTAGA +
Preference number: 5 (lower is better)
Translates to: NTHRCPLNIVHLRPC*GGHIASTVHTRLSR
Trigger: TCTAGACAGCCGAGTATGAACCGTGGAGGCTATATGCCCACCCCAACAGGGGCGAAGGTGGACTATATTCAGGGGACACCGGTGAGTGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103238.2
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CAA 90 bp CCTTCTGCTTCAAACGAAAGAAATGGAGTGAGCAGGACCTCCCTTCGTTTCCGGTCTGCGAGGCCGTGTTaGGCACAACAGCCAGGCCTT +
Preference number: 5 (lower is better)
Translates to: PSASNERNGVSRTSLRFRSARPC*AQQPGL
Trigger: AAGGCCTGGCTGTTGTGCCAAACACGGCCTCGCAGA...CCGGAAACGAAGGGAGGTCCTGCTCACTCCATTTCTTTCGTTTGAAGCAGAAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CAA 90 bp GCAAGGGTGGGTGCTGCTTCTGATCCTGGAGGGAAGGGGCGGCGTTGCTCAACATGCTTCAGGAGATCATaGAGAGTATTCCTGGAATCC +
Preference number: 5 (lower is better)
Translates to: ARVGAASDPGGKGRRCSTCFRRS*RVFLES
Trigger: GGATTCCAGGAATACTCTCAATGATCTCCTGAAGCA...TGTTGAGCAACGCCGCCCCTTCCCTCCAGGATCAGAAGCAGCACCCACCCTTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103241.8
CDS-3UTR CAA 90 bp CATCCCTTCTGCTTCAAACGAAAGAAATGGAGTGAGCAGGACCTCCCTTCGTTTGTGGGACCTCAGCCATaGGTCCCACCGGGTCCAGCA +
Preference number: 5 (lower is better)
Translates to: HPFCFKRKKWSEQDLPSFVGPQP*VPPGPA
Trigger: TGCTGGACCCGGTGGGACCAATGGCTGAGGTCCCAC...AAACGAAGGGAGGTCCTGCTCACTCCATTTCTTTCGTTTGAAGCAGAAGGGATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CAA 90 bp GTACCCTCACAGCTTCCTCGCAACAGCAGGGACAGGATAAAGCCACACGGGAATTTTCCAGAGAAGTCATaGGCACCCCAGGAGTGGTGG +
Preference number: 5 (lower is better)
Translates to: VPSQLPRNSRDRIKPHGNFPEKS*APQEWW
Trigger: CCACCACTCCTGGGGTGCCAATGACTTCTCTGGAAA...ATTCCCGTGTGGCTTTATCCTGTCCCTGCTGTTGCGAGGAAGCTGTGAGGGTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CAA 90 bp CTGGCTACACATCCCTTCTGCTTCAAACGAAAGAAATGGAGTGAGCAGGACCTCCCACCTTCGCCCCTGTaGGGGTGGGCATATAGCCTC +
Preference number: 5 (lower is better)
Translates to: LATHPFCFKRKKWSEQDLPPSPL*GWAYSL
Trigger: GAGGCTATATGCCCACCCCAACAGGGGCGAAGGTGG...GAGGTCCTGCTCACTCCATTTCTTTCGTTTGAAGCAGAAGGGATGTGTAGCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CAA 90 bp GAAGGGAGCCTTCCCTGGCTACACATCCCTTCTGCTTCAAACGAAAGAAATGGACCACCTTCGCCCCTGTaGGGGTGGGCATATAGCCTC +
Preference number: 5 (lower is better)
Translates to: EGSLPWLHIPSASNERNGPPSPL*GWAYSL
Trigger: GAGGCTATATGCCCACCCCAACAGGGGCGAAGGTGG...TCCATTTCTTTCGTTTGAAGCAGAAGGGATGTGTAGCCAGGGAAGGCTCCCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CAA 90 bp GCAAGGGTGGGTGCTGCTTCTGATCCTGGAGGGAAGGGGCGGCGTTGCTCAACAGAACAAAGGAAGGCTTaGGTGGCACATCAGGTTTTA +
Preference number: 5 (lower is better)
Translates to: ARVGAASDPGGKGRRCSTEQRKA*VAHQVL
Trigger: TAAAACCTGATGTGCCACCAAAGCCTTCCTTTGTTC...TGTTGAGCAACGCCGCCCCTTCCCTCCAGGATCAGAAGCAGCACCCACCCTTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103241.8
CDS GCA 90 bp AGCCAGGGTGTCATCTGGAAAGTCGATGGAGGTCTTGTAAGCTTCTaGGAGGCCGTGTTTGGCACAACAGCCAGGCCTTGGTTTTGGTAC +
Preference number: 5 (lower is better)
Translates to: SQGVIWKVDGGLVSF*EAVFGTTARPWFWY
Trigger: GTACCAAAACCAAGGCCTGGCTGTTGTGCCAAACACGGCCTCGCAGAAGCTTACAAGACCTCCATCGACTTTCCAGATGACACCCTGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103238.2
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS CCA 90 bp GTGGCACATCAGGTTTTAAGGATGGTGTCCTCTTTAGTCCCGTCCTaGGGAGGGTGCCATTACTGGTATAGCTGCTCTGTCTGGAGAGGG +
Preference number: 5 (lower is better)
Translates to: VAHQVLRMVSSLVPS*GGCHYWYSCSVWRG
Trigger: CCCTCTCCAGACAGAGCAGCTATACCAGTAATGGCACCCTCCCCAGGACGGGACTAAAGAGGACACCATCCTTAAAACCTGATGTGCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103238.2
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CAA 90 bp CCTTCTGCTTCAAACGAAAGAAATGGAGTGAGCAGGACCTCCCTTCGTTTCCGGCTGTGCTGCGATTCGTaGCCTGAAGGGCGTCCTCTA +
Preference number: 5 (lower is better)
Translates to: PSASNERNGVSRTSLRFRLCCDS*PEGRPL
Trigger: TAGAGGACGCCCTTCAGGCAACGAATCGCAGCACAG...CCGGAAACGAAGGGAGGTCCTGCTCACTCCATTTCTTTCGTTTGAAGCAGAAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CAA 90 bp GCAAGGGTGGGTGCTGCTTCTGATCCTGGAGGGAAGGGGCGGCGTTGCTCAACAACAGTGGGGATGCCATaGATTTGGATTATGTCTGTT +
Preference number: 5 (lower is better)
Translates to: ARVGAASDPGGKGRRCSTTVGMP*IWIMSV
Trigger: AACAGACATAATCCAAATCAATGGCATCCCCACTGT...TGTTGAGCAACGCCGCCCCTTCCCTCCAGGATCAGAAGCAGCACCCACCCTTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103241.8
CDS-3UTR CAA 90 bp GGAATGTTTATCATGGCAAGGGTGGGTGCTGCTTCTGATCCTGGAGGGAAGGGGTTCTGCTGGTATTCCTaGACGGGGCTGTCAAAGAGG +
Preference number: 5 (lower is better)
Translates to: GMFIMARVGAASDPGGKGFCWYS*TGLSKR
Trigger: CCTCTTTGACAGCCCCGTCAAGGAATACCAGCAGAA...CCCCTTCCCTCCAGGATCAGAAGCAGCACCCACCCTTGCCATGATAAACATTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103241.8
CDS-3UTR CAA 90 bp ACACAGAAGCCTTGCTGTAGTAGCTACATGTGGCAAGTTCTGGTGTTACCAAAGGTGGGACCTCAGCCATaGGTCCCACCGGGTCCAGCA +
Preference number: 5 (lower is better)
Translates to: TQKPCCSSYMWQVLVLPKVGPQP*VPPGPA
Trigger: TGCTGGACCCGGTGGGACCAATGGCTGAGGTCCCAC...CTTTGGTAACACCAGAACTTGCCACATGTAGCTACTACAGCAAGGCTTCTGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CAA 90 bp AGTACTGTATCAGCTCTTTACACTGGTGAAGGGAGCCTTCCCTGGCTACACATCTCCCGGTTAGGGACCTaGGGTGGGACCTCAGCCATT +
Preference number: 5 (lower is better)
Translates to: STVSALYTGEGSLPWLHISRLGT*GGTSAI
Trigger: AATGGCTGAGGTCCCACCCAAGGTCCCTAACCGGGA...GATGTGTAGCCAGGGAAGGCTCCCTTCACCAGTGTAAAGAGCTGATACAGTACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS TCA 90 bp GGGATGCGGACCACGCAGCTAGAGAAGGCCACGTATAAAGCATGGTaGTCCTTGTCCAGCTGTAATGAGACCACCTTTCTGTCCTCCTCA +
Preference number: 5 (lower is better)
Translates to: GMRTTQLEKATYKAW*SLSSCNETTFLSSS
Trigger: TGAGGAGGACAGAAAGGTGGTCTCATTACAGCTGGACAAGGATCACCATGCTTTATACGTGGCCTTCTCTAGCTGCGTGGTCCGCATCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103238.2
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS TCA 90 bp AAAGCGGCAAACACGCAGGTGATGAGGACATTCATGTGGACCATCTaGTTGGATTCTCCAGACTGGACTTCCCACCGTACACCGTGGCAG +
Preference number: 5 (lower is better)
Translates to: KAANTQVMRTFMWTI*LDSPDWTSHRTPWQ
Trigger: CTGCCACGGTGTACGGTGGGAAGTCCAGTCTGGAGAATCCAATCAGATGGTCCACATGAATGTCCTCATCACCTGCGTGTTTGCCGCTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000103241.8
CDS TCA 90 bp GGTTGCTGTAGAGTTTGGGAGAATCAATGTTCTGCTGGTATTCCTTaGCGGGGCTGTCAAAGAGGCCGTTCAGCTTGGCGAAGCTTCCGC +
Preference number: 5 (lower is better)
Translates to: GCCRVWENQCSAGIP*RGCQRGRSAWRSFR
Trigger: GCGGAAGCTTCGCCAAGCTGAACGGCCTCTTTGACAGCCCCGTCAAGGAATACCAGCAGAACATTGATTCTCCCAAACTCTACAGCAACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103238.2
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS TCA 90 bp AGTATTCCTGGAATCCACAGACCGCCGGTGCTCCCGCTTACTGGATaGCTTCGTAAGAGGGTGATCCATGCTCTGAAGCTTCTTTTCGGC +
Preference number: 5 (lower is better)
Translates to: SIPGIHRPPVLPLTG*LRKRVIHALKLLFG
Trigger: GCCGAAAAGAAGCTTCAGAGCATGGATCACCCTCTTACGAAGTCATCCAGTAAGCGGGAGCACCGGCGGTCTGTGGATTCCAGGAATACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103238.2
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS GCA 90 bp CTTGGCGAAGCTTCCGCTGGAGTCTGTGCACGACTGGGCGGATTCTaGGTCTTTATGGATCTTTCTGTTCTTCCGAACGAACATGTCACG +
Preference number: 5 (lower is better)
Translates to: LGEASAGVCARLGGF*VFMDLSVLPNEHVT
Trigger: CGTGACATGTTCGTTCGGAAGAACAGAAAGATCCATAAAGACGCAGAATCCGCCCAGTCGTGCACAGACTCCAGCGGAAGCTTCGCCAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103238.2
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS GCA 90 bp TGTCAAAGAGGCCGTTCAGCTTGGCGAAGCTTCCGCTGGAGTCTGTaGACGACTGGGCGGATTCTGCGTCTTTATGGATCTTTCTGTTCT +
Preference number: 5 (lower is better)
Translates to: CQRGRSAWRSFRWSL*TTGRILRLYGSFCS
Trigger: AGAACAGAAAGATCCATAAAGACGCAGAATCCGCCCAGTCGTGCACAGACTCCAGCGGAAGCTTCGCCAAGCTGAACGGCCTCTTTGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103238.2
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS CCA 90 bp AGAGTCCATCAGCGGGTGGGACTTGATGAAAGCCAGGGTGTCATCTaGAAAGTCGATGGAGGTCTTGTAAGCTTCTGCGAGGCCGTGTTT +
Preference number: 5 (lower is better)
Translates to: RVHQRVGLDESQGVI*KVDGGLVSFCEAVF
Trigger: AAACACGGCCTCGCAGAAGCTTACAAGACCTCCATCGACTTTCCAGATGACACCCTGGCTTTCATCAAGTCCCACCCGCTGATGGACTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103238.2
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS CCA 90 bp TATCCTCCAGGGAGCATCCCTAGGGTCACTCTCTCACAAACTCCCTaGCTTAACCAACCACAGTACGGGTCACGTGATGCAATGCAAGAC +
Preference number: 5 (lower is better)
Translates to: YPPGSIPRVTLSQTP*LNQPQYGSRDAMQD
Trigger: GTCTTGCATTGCATCACGTGACCCGTACTGTGGTTGGTTAAGCCAGGGAGTTTGTGAGAGAGTGACCCTAGGGATGCTCCCTGGAGGATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000103238.2
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CAA 90 bp AGTACTGTATCAGCTCTTTACACTGGTGAAGGGAGCCTTCCCTGGCTACACATCCTGTGCTGCGATTCGTaGCCTGAAGGGCGTCCTCTA +
Preference number: 5 (lower is better)
Translates to: STVSALYTGEGSLPWLHILCCDS*PEGRPL
Trigger: TAGAGGACGCCCTTCAGGCAACGAATCGCAGCACAG...GATGTGTAGCCAGGGAAGGCTCCCTTCACCAGTGTAAAGAGCTGATACAGTACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CAA 90 bp CTGGCTACACATCCCTTCTGCTTCAAACGAAAGAAATGGAGTGAGCAGGACCTCCTGTGCTGCGATTCGTaGCCTGAAGGGCGTCCTCTA +
Preference number: 5 (lower is better)
Translates to: LATHPFCFKRKKWSEQDLLCCDS*PEGRPL
Trigger: TAGAGGACGCCCTTCAGGCAACGAATCGCAGCACAG...GAGGTCCTGCTCACTCCATTTCTTTCGTTTGAAGCAGAAGGGATGTGTAGCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CAA 90 bp GTACCCTCACAGCTTCCTCGCAACAGCAGGGACAGGATAAAGCCACACGGGAATACGTCAGCTTCTTGCTaGGTATCACCTCTGTTTGGG +
Preference number: 5 (lower is better)
Translates to: VPSQLPRNSRDRIKPHGNTSASC*VSPLFG
Trigger: CCCAAACAGAGGTGATACCAAGCAAGAAGCTGACGT...ATTCCCGTGTGGCTTTATCCTGTCCCTGCTGTTGCGAGGAAGCTGTGAGGGTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CAA 90 bp GTGAGCAGGACCTCCCTTCGTTTCCGGCAAGTACACAGAAGCCTTGCTGTAGTAGCAAAGAGGGCGACATaGGTTTGTCGGGCATCAAAC +
Preference number: 5 (lower is better)
Translates to: VSRTSLRFRQVHRSLAVVAKRAT*VCRASN
Trigger: GTTTGATGCCCGACAAACCAATGTCGCCCTCTTTGC...TACTACAGCAAGGCTTCTGTGTACTTGCCGGAAACGAAGGGAGGTCCTGCTCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CAA 90 bp AATGGAGTGAGCAGGACCTCCCTTCGTTTCCGGCAAGTACACAGAAGCCTTGCTGCAAAGAGGGCGACATaGGTTTGTCGGGCATCAAAC +
Preference number: 5 (lower is better)
Translates to: NGVSRTSLRFRQVHRSLAAKRAT*VCRASN
Trigger: GTTTGATGCCCGACAAACCAATGTCGCCCTCTTTGC...AGCAAGGCTTCTGTGTACTTGCCGGAAACGAAGGGAGGTCCTGCTCACTCCATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CAA 90 bp AGTGAGCAGGACCTCCCTTCGTTTCCGGCAAGTACACAGAAGCCTTGCTGTAGTGAACCAGGAATGCTGTaGAGCTGTGTGGTGAAGACC +
Preference number: 5 (lower is better)
Translates to: SEQDLPSFPASTQKPCCSEPGML*SCVVKT
Trigger: GGTCTTCACCACACAGCTCAACAGCATTCCTGGTTC...ACTACAGCAAGGCTTCTGTGTACTTGCCGGAAACGAAGGGAGGTCCTGCTCACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CAA 90 bp GTGAGCAGGACCTCCCTTCGTTTCCGGCAAGTACACAGAAGCCTTGCTGTAGTAGAACCAGGAATGCTGTaGAGCTGTGTGGTGAAGACC +
Preference number: 5 (lower is better)
Translates to: VSRTSLRFRQVHRSLAVVEPGML*SCVVKT
Trigger: GGTCTTCACCACACAGCTCAACAGCATTCCTGGTTC...TACTACAGCAAGGCTTCTGTGTACTTGCCGGAAACGAAGGGAGGTCCTGCTCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CAA 90 bp TCTGATCCTGGAGGGAAGGGGCGGCGTTGCTCAACAACAAATCGCTCTAGGTGGCTTGGTTTTGGTACTTaGTCTTCGGGAACTGCTGTC +
Preference number: 5 (lower is better)
Translates to: SDPGGKGRRCSTTNRSRWLGFGT*SSGTAV
Trigger: GACAGCAGTTCCCGAAGACAAAGTACCAAAACCAAG...CCACCTAGAGCGATTTGTTGTTGAGCAACGCCGCCCCTTCCCTCCAGGATCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103241.8
CDS-3UTR CAA 90 bp CATCCCTTCTGCTTCAAACGAAAGAAATGGAGTGAGCAGGACCTCCCTTCGTTTTCCCGGTTAGGGACCTaGGGTGGGACCTCAGCCATT +
Preference number: 5 (lower is better)
Translates to: HPFCFKRKKWSEQDLPSFSRLGT*GGTSAI
Trigger: AATGGCTGAGGTCCCACCCAAGGTCCCTAACCGGGA...AAACGAAGGGAGGTCCTGCTCACTCCATTTCTTTCGTTTGAAGCAGAAGGGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS TCA 90 bp AAAGCGGCAAACACGCAGGTGATGAGGACATTCATGTGGACCATCTaGTTGGATTCTCCAGACTGGACTTCCCACCGTACACCCTTTGGG +
Preference number: 5 (lower is better)
Translates to: KAANTQVMRTFMWTI*LDSPDWTSHRTPFG
Trigger: CCCAAAGGGTGTACGGTGGGAAGTCCAGTCTGGAGAATCCAATCAGATGGTCCACATGAATGTCCTCATCACCTGCGTGTTTGCCGCTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000077847.12
ENSMUST00000103238.2
ENSMUST00000103239.10
CDS CCA 90 bp TCGGTTAACAGCAGCATCCCTAGGGTCACTCTCTCACAAACTCCCTaGCTTAACCAACCACAGTACGGGTCACGTGATGCAATGCAAGAC +
Preference number: 5 (lower is better)
Translates to: SVNSSIPRVTLSQTP*LNQPQYGSRDAMQD
Trigger: GTCTTGCATTGCATCACGTGACCCGTACTGTGGTTGGTTAAGCCAGGGAGTTTGTGAGAGAGTGACCCTAGGGATGCTGCTGTTAACCGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000051419.15
ENSMUST00000078621.12
CDS CCA 90 bp TTGCCGTACTCCGTGTCCTGCTCATATCCTCCAGGGCTGTGGTTATaGAAAGCAAAGAAGTCTTCGGTTAACAGCAGCATCCCTAGGGTC +
Preference number: 5 (lower is better)
Translates to: LPYSVSCSYPPGLWL*KAKKSSVNSSIPRV
Trigger: GACCCTAGGGATGCTGCTGTTAACCGAAGACTTCTTTGCTTTCCATAACCACAGCCCTGGAGGATATGAGCAGGACACGGAGTACGGCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000051419.15
ENSMUST00000078621.12
CDS CCA 90 bp GCTGTGTTGCCGTACTCCGTGTCCTGCTCATATCCTCCAGGGCTGTaGTTATGGAAAGCAAAGAAGTCTTCGGTTAACAGCAGCATCCCT +
Preference number: 5 (lower is better)
Translates to: AVLPYSVSCSYPPGL*LWKAKKSSVNSSIP
Trigger: AGGGATGCTGCTGTTAACCGAAGACTTCTTTGCTTTCCATAACCACAGCCCTGGAGGATATGAGCAGGACACGGAGTACGGCAACACAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000051419.15
ENSMUST00000078621.12
CDS CCA 90 bp GGCATTCGAGTTGGAGAAGGATGTATTGTAGTCGTGAGTGGCGTTTaGAAGAACGATGGCACTGGGGATATGCCCGTGACTCAATGGGGA +
Preference number: 5 (lower is better)
Translates to: GIRVGEGCIVVVSGV*KNDGTGDMPVTQWG
Trigger: TCCCCATTGAGTCACGGGCATATCCCCAGTGCCATCGTTCTTCCAAACGCCACTCACGACTACAATACATCCTTCTCCAACTCGAATGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103238.2
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CAA 90 bp TCTGATCCTGGAGGGAAGGGGCGGCGTTGCTCAACAACAAATCGCTCTAGGTGGATCGGGTTGAAAGCATaGGTACCACAGACAAAAACC +
Preference number: 5 (lower is better)
Translates to: SDPGGKGRRCSTTNRSRWIGLKA*VPQTKT
Trigger: GGTTTTTGTCTGTGGTACCAATGCTTTCAACCCGAT...CCACCTAGAGCGATTTGTTGTTGAGCAACGCCGCCCCTTCCCTCCAGGATCAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103241.8
CDS-3UTR CAA 90 bp ATCCTGGAGGGAAGGGGCGGCGTTGCTCAACAACAAATCGCTCTAGGTGGCTTTTATCTGCACATCGGGTaGAAAGCATTGGTACCACAG +
Preference number: 5 (lower is better)
Translates to: ILEGRGGVAQQQIALGGFYLHIG*KALVPQ
Trigger: CTGTGGTACCAATGCTTTCAACCCGATGTGCAGATA...AAAGCCACCTAGAGCGATTTGTTGTTGAGCAACGCCGCCCCTTCCCTCCAGGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103241.8
CDS-3UTR CAA 90 bp TCTGATCCTGGAGGGAAGGGGCGGCGTTGCTCAACAACAAATCGCTCTAGGTGGCGGGAATACACAGCCTaGCCTAAGTTATTATGTTCC +
Preference number: 5 (lower is better)
Translates to: SDPGGKGRRCSTTNRSRWREYTA*PKLLCS
Trigger: GGAACATAATAACTTAGGCAAGGCTGTGTATTCCCG...CCACCTAGAGCGATTTGTTGTTGAGCAACGCCGCCCCTTCCCTCCAGGATCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103241.8
CDS-3UTR CAA 90 bp CCCCCAAGTAATGCAGACCATGGTCACTGTCCCAAGATATCACTTGAACTCCGCGAACCAGGAATGCTGTaGAGCTGTGTGGTGAAGACC +
Preference number: 5 (lower is better)
Translates to: PPSNADHGHCPKISLELREPGML*SCVVKT
Trigger: GGTCTTCACCACACAGCTCAACAGCATTCCTGGTTC...GCGGAGTTCAAGTGATATCTTGGGACAGTGACCATGGTCTGCATTACTTGGGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103241.8
CDS-3UTR CAA 90 bp GGAATGTTTATCATGGCAAGGGTGGGTGCTGCTTCTGATCCTGGAGGGAAGGGGCTTGGTTTTGGTACTTaGTCTTCGGGAACTGCTGTC +
Preference number: 5 (lower is better)
Translates to: GMFIMARVGAASDPGGKGLGFGT*SSGTAV
Trigger: GACAGCAGTTCCCGAAGACAAAGTACCAAAACCAAG...CCCCTTCCCTCCAGGATCAGAAGCAGCACCCACCCTTGCCATGATAAACATTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103241.8
CDS-3UTR CAA 90 bp CCTTCTGCTTCAAACGAAAGAAATGGAGTGAGCAGGACCTCCCTTCGTTTCCGGTTCTGCTGGTATTCCTaGACGGGGCTGTCAAAGAGG +
Preference number: 5 (lower is better)
Translates to: PSASNERNGVSRTSLRFRFCWYS*TGLSKR
Trigger: CCTCTTTGACAGCCCCGTCAAGGAATACCAGCAGAA...CCGGAAACGAAGGGAGGTCCTGCTCACTCCATTTCTTTCGTTTGAAGCAGAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CAA 90 bp GTGGCAAGTTCTGGTGTTACCAAAGTGACAGAGTTTCTTTGGCTACTTGTTTCTGTGGGACCTCAGCCATaGGTCCCACCGGGTCCAGCA +
Preference number: 5 (lower is better)
Translates to: VASSGVTKVTEFLWLLVSVGPQP*VPPGPA
Trigger: TGCTGGACCCGGTGGGACCAATGGCTGAGGTCCCAC...AGAAACAAGTAGCCAAAGAAACTCTGTCACTTTGGTAACACCAGAACTTGCCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CAA 90 bp AGTGAGCAGGACCTCCCTTCGTTTCCGGCAAGTACACAGAAGCCTTGCTGTAGTGGGACATCTACTCTCTaGGTTGGACTATTTCTGGGG +
Preference number: 5 (lower is better)
Translates to: SEQDLPSFPASTQKPCCSGTSTL*VGLFLG
Trigger: CCCCAGAAATAGTCCAACCAAGAGAGTAGATGTCCC...ACTACAGCAAGGCTTCTGTGTACTTGCCGGAAACGAAGGGAGGTCCTGCTCACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CAA 90 bp AGTACTGTATCAGCTCTTTACACTGGTGAAGGGAGCCTTCCCTGGCTACACATCTTTCCAGAGAAGTCATaGGCACCCCAGGAGTGGTGG +
Preference number: 5 (lower is better)
Translates to: STVSALYTGEGSLPWLHIFPEKS*APQEWW
Trigger: CCACCACTCCTGGGGTGCCAATGACTTCTCTGGAAA...GATGTGTAGCCAGGGAAGGCTCCCTTCACCAGTGTAAAGAGCTGATACAGTACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CAA 90 bp GAAGGGAGCCTTCCCTGGCTACACATCCCTTCTGCTTCAAACGAAAGAAATGGATTTCCAGAGAAGTCATaGGCACCCCAGGAGTGGTGG +
Preference number: 5 (lower is better)
Translates to: EGSLPWLHIPSASNERNGFPEKS*APQEWW
Trigger: CCACCACTCCTGGGGTGCCAATGACTTCTCTGGAAA...TCCATTTCTTTCGTTTGAAGCAGAAGGGATGTGTAGCCAGGGAAGGCTCCCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CAA 90 bp GTACCCTCACAGCTTCCTCGCAACAGCAGGGACAGGATAAAGCCACACGGGAATTCTGACAGATGTGGTTaGCGGAACAAAGGAAGGCTT +
Preference number: 5 (lower is better)
Translates to: VPSQLPRNSRDRIKPHGNSDRCG*RNKGRL
Trigger: AAGCCTTCCTTTGTTCCGCAAACCACATCTGTCAGA...ATTCCCGTGTGGCTTTATCCTGTCCCTGCTGTTGCGAGGAAGCTGTGAGGGTAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS TCA 90 bp TTCAGAGCCAACAAAGATGACTGTGTAGTTTTGGTATGGCCCTGCTaGACGGTCCACTTCGATGGCTGTCAACCTGTACCTGACCCGTGT +
Preference number: 5 (lower is better)
Translates to: FRANKDDCVVLVWPC*TVHFDGCQPVPDPC
Trigger: ACACGGGTCAGGTACAGGTTGACAGCCATCGAAGTGGACCGTTCAGCAGGGCCATACCAAAACTACACAGTCATCTTTGTTGGCTCTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103238.2
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS CCA 90 bp CGGCCATGGACTTTGTATCCGTGTTTGGTGGCAGTTCCTTCCGACTaGTCAGCAGGTTGCTGTAGAGTTTGGGAGAATCAATGTTCTGCT +
Preference number: 5 (lower is better)
Translates to: RPWTLYPCLVAVPSD*SAGCCRVWENQCSA
Trigger: AGCAGAACATTGATTCTCCCAAACTCTACAGCAACCTGCTGACCAGTCGGAAGGAACTGCCACCAAACACGGATACAAAGTCCATGGCCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103238.2
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS CCA 90 bp CTTTGTGGGCATTCGAGTTGGAGAAGGATGTATTGTAGTCGTGAGTaGCGTTTGGAAGAACGATGGCACTGGGGATATGCCCGTGACTCA +
Preference number: 5 (lower is better)
Translates to: LCGHSSWRRMYCSRE*RLEERWHWGYARDS
Trigger: TGAGTCACGGGCATATCCCCAGTGCCATCGTTCTTCCAAACGCCACTCACGACTACAATACATCCTTCTCCAACTCGAATGCCCACAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103238.2
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CAA 90 bp TCTGATCCTGGAGGGAAGGGGCGGCGTTGCTCAACAACAAATCGCTCTAGGTGGAAACCGGATATTGCCTaGAATAGTGATAGTCAACCG +
Preference number: 5 (lower is better)
Translates to: SDPGGKGRRCSTTNRSRWKPDIA*NSDSQP
Trigger: CGGTTGACTATCACTATTCAAGGCAATATCCGGTTT...CCACCTAGAGCGATTTGTTGTTGAGCAACGCCGCCCCTTCCCTCCAGGATCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103241.8
CDS-3UTR CAA 90 bp AGTGAGCAGGACCTCCCTTCGTTTCCGGCAAGTACACAGAAGCCTTGCTGTAGTTATCTGCACATCGGGTaGAAAGCATTGGTACCACAG +
Preference number: 5 (lower is better)
Translates to: SEQDLPSFPASTQKPCCSYLHIG*KALVPQ
Trigger: CTGTGGTACCAATGCTTTCAACCCGATGTGCAGATA...ACTACAGCAAGGCTTCTGTGTACTTGCCGGAAACGAAGGGAGGTCCTGCTCACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CAA 90 bp GTGAGCAGGACCTCCCTTCGTTTCCGGCAAGTACACAGAAGCCTTGCTGTAGTATATCTGCACATCGGGTaGAAAGCATTGGTACCACAG +
Preference number: 5 (lower is better)
Translates to: VSRTSLRFRQVHRSLAVVYLHIG*KALVPQ
Trigger: CTGTGGTACCAATGCTTTCAACCCGATGTGCAGATA...TACTACAGCAAGGCTTCTGTGTACTTGCCGGAAACGAAGGGAGGTCCTGCTCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CAA 90 bp CTGGCTACACATCCCTTCTGCTTCAAACGAAAGAAATGGAGTGAGCAGGACCTCGCAAAGAGGGCGACATaGGTTTGTCGGGCATCAAAC +
Preference number: 5 (lower is better)
Translates to: LATHPFCFKRKKWSEQDLAKRAT*VCRASN
Trigger: GTTTGATGCCCGACAAACCAATGTCGCCCTCTTTGC...GAGGTCCTGCTCACTCCATTTCTTTCGTTTGAAGCAGAAGGGATGTGTAGCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CAA 90 bp TCTGATCCTGGAGGGAAGGGGCGGCGTTGCTCAACAACAAATCGCTCTAGGTGGTGGAATCGTATTTTATaGTGCGAAGGGCAGATCCAT +
Preference number: 5 (lower is better)
Translates to: SDPGGKGRRCSTTNRSRWWNRIL*CEGQIH
Trigger: ATGGATCTGCCCTTCGCACAATAAAATACGATTCCA...CCACCTAGAGCGATTTGTTGTTGAGCAACGCCGCCCCTTCCCTCCAGGATCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103241.8
CDS-3UTR CAA 90 bp CTTCCCTGGCTACACATCCCTTCTGCTTCAAACGAAAGAAATGGAGTGAGCAGGGAACCAGGAATGCTGTaGAGCTGTGTGGTGAAGACC +
Preference number: 5 (lower is better)
Translates to: LPWLHIPSASNERNGVSREPGML*SCVVKT
Trigger: GGTCTTCACCACACAGCTCAACAGCATTCCTGGTTC...CCTGCTCACTCCATTTCTTTCGTTTGAAGCAGAAGGGATGTGTAGCCAGGGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CAA 90 bp AGTACTGTATCAGCTCTTTACACTGGTGAAGGGAGCCTTCCCTGGCTACACATCGAACCAGGAATGCTGTaGAGCTGTGTGGTGAAGACC +
Preference number: 5 (lower is better)
Translates to: STVSALYTGEGSLPWLHIEPGML*SCVVKT
Trigger: GGTCTTCACCACACAGCTCAACAGCATTCCTGGTTC...GATGTGTAGCCAGGGAAGGCTCCCTTCACCAGTGTAAAGAGCTGATACAGTACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CAA 90 bp GGAATGTTTATCATGGCAAGGGTGGGTGCTGCTTCTGATCCTGGAGGGAAGGGGTCTTTGAACCGCCCTTaGAACACTTTCTCAATGTCG +
Preference number: 5 (lower is better)
Translates to: GMFIMARVGAASDPGGKGSLNRP*NTFSMS
Trigger: CGACATTGAGAAAGTGTTCAAAGGGCGGTTCAAAGA...CCCCTTCCCTCCAGGATCAGAAGCAGCACCCACCCTTGCCATGATAAACATTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103241.8
CDS-3UTR CAA 90 bp GTACCCTCACAGCTTCCTCGCAACAGCAGGGACAGGATAAAGCCACACGGGAATTCTTTGAACCGCCCTTaGAACACTTTCTCAATGTCG +
Preference number: 5 (lower is better)
Translates to: VPSQLPRNSRDRIKPHGNSLNRP*NTFSMS
Trigger: CGACATTGAGAAAGTGTTCAAAGGGCGGTTCAAAGA...ATTCCCGTGTGGCTTTATCCTGTCCCTGCTGTTGCGAGGAAGCTGTGAGGGTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CAA 90 bp AATGGAGTGAGCAGGACCTCCCTTCGTTTCCGGCAAGTACACAGAAGCCTTGCTCTTGGTTTTGGTACTTaGTCTTCGGGAACTGCTGTC +
Preference number: 5 (lower is better)
Translates to: NGVSRTSLRFRQVHRSLALGFGT*SSGTAV
Trigger: GACAGCAGTTCCCGAAGACAAAGTACCAAAACCAAG...AGCAAGGCTTCTGTGTACTTGCCGGAAACGAAGGGAGGTCCTGCTCACTCCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CAA 90 bp AGTGAGCAGGACCTCCCTTCGTTTCCGGCAAGTACACAGAAGCCTTGCTGTAGTCTTGGTTTTGGTACTTaGTCTTCGGGAACTGCTGTC +
Preference number: 5 (lower is better)
Translates to: SEQDLPSFPASTQKPCCSLGFGT*SSGTAV
Trigger: GACAGCAGTTCCCGAAGACAAAGTACCAAAACCAAG...ACTACAGCAAGGCTTCTGTGTACTTGCCGGAAACGAAGGGAGGTCCTGCTCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CAA 90 bp ATCCTGGAGGGAAGGGGCGGCGTTGCTCAACAACAAATCGCTCTAGGTGGCTTTTGCTTCAGGAGATCATaGAGAGTATTCCTGGAATCC +
Preference number: 5 (lower is better)
Translates to: ILEGRGGVAQQQIALGGFCFRRS*RVFLES
Trigger: GGATTCCAGGAATACTCTCAATGATCTCCTGAAGCA...AAAGCCACCTAGAGCGATTTGTTGTTGAGCAACGCCGCCCCTTCCCTCCAGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103241.8
CDS-3UTR CAA 90 bp TCTGATCCTGGAGGGAAGGGGCGGCGTTGCTCAACAACAAATCGCTCTAGGTGGCTTTGGGGTTACTGTTaGGGTCATTTAGATGCTTCA +
Preference number: 5 (lower is better)
Translates to: SDPGGKGRRCSTTNRSRWLWGYC*GHLDAS
Trigger: TGAAGCATCTAAATGACCCAAACAGTAACCCCAAAG...CCACCTAGAGCGATTTGTTGTTGAGCAACGCCGCCCCTTCCCTCCAGGATCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103241.8
CDS-3UTR CAA 90 bp GTGAGCAGGACCTCCCTTCGTTTCCGGCAAGTACACAGAAGCCTTGCTGTAGTACATCTACTCTCTTGGTaGGACTATTTCTGGGGAGTG +
Preference number: 5 (lower is better)
Translates to: VSRTSLRFRQVHRSLAVVHLLSW*DYFWGV
Trigger: CACTCCCCAGAAATAGTCCAACCAAGAGAGTAGATG...TACTACAGCAAGGCTTCTGTGTACTTGCCGGAAACGAAGGGAGGTCCTGCTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CAA 90 bp CATCCCTTCTGCTTCAAACGAAAGAAATGGAGTGAGCAGGACCTCCCTTCGTTTTTTCCAGAGAAGTCATaGGCACCCCAGGAGTGGTGG +
Preference number: 5 (lower is better)
Translates to: HPFCFKRKKWSEQDLPSFFPEKS*APQEWW
Trigger: CCACCACTCCTGGGGTGCCAATGACTTCTCTGGAAA...AAACGAAGGGAGGTCCTGCTCACTCCATTTCTTTCGTTTGAAGCAGAAGGGATG
51% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS TCA 90 bp CTTTGGGGTTACTGTTTGGGTCATTTAGATGCTTCAGGAGATCATTaGGAGTATTCCTGGAATCCACAGACCGCCGGTGCTCCCGCTTAC +
Preference number: 5 (lower is better)
Translates to: LWGYCLGHLDASGDH*EYSWNPQTAGAPAY
Trigger: GTAAGCGGGAGCACCGGCGGTCTGTGGATTCCAGGAATACTCTCAATGATCTCCTGAAGCATCTAAATGACCCAAACAGTAACCCCAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103238.2
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS TCA 90 bp AAAGCGGCAAACACGCAGGTGATGAGGACATTCATGTGGACCATCTaGTTGGATTCTCCAGACTGGACTTCCCACCGTACACCAGATGTT +
Preference number: 5 (lower is better)
Translates to: KAANTQVMRTFMWTI*LDSPDWTSHRTPDV
Trigger: AACATCTGGTGTACGGTGGGAAGTCCAGTCTGGAGAATCCAATCAGATGGTCCACATGAATGTCCTCATCACCTGCGTGTTTGCCGCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000078621.12
CDS-3UTR CAA 90 bp GCTACATGTGGCAAGTTCTGGTGTTACCAAAGTGACAGAGTTTCTTTGGCTACTCTGTGCTGCGATTCGTaGCCTGAAGGGCGTCCTCTA +
Preference number: 5 (lower is better)
Translates to: ATCGKFWCYQSDRVSLATLCCDS*PEGRPL
Trigger: TAGAGGACGCCCTTCAGGCAACGAATCGCAGCACAG...AGTAGCCAAAGAAACTCTGTCACTTTGGTAACACCAGAACTTGCCACATGTAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CAA 90 bp CTGGCTACACATCCCTTCTGCTTCAAACGAAAGAAATGGAGTGAGCAGGACCTCACGTCAGCTTCTTGCTaGGTATCACCTCTGTTTGGG +
Preference number: 5 (lower is better)
Translates to: LATHPFCFKRKKWSEQDLTSASC*VSPLFG
Trigger: CCCAAACAGAGGTGATACCAAGCAAGAAGCTGACGT...GAGGTCCTGCTCACTCCATTTCTTTCGTTTGAAGCAGAAGGGATGTGTAGCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CAA 90 bp GTGAGCAGGACCTCCCTTCGTTTCCGGCAAGTACACAGAAGCCTTGCTGTAGTAATCGGGTTGAAAGCATaGGTACCACAGACAAAAACC +
Preference number: 5 (lower is better)
Translates to: VSRTSLRFRQVHRSLAVVIGLKA*VPQTKT
Trigger: GGTTTTTGTCTGTGGTACCAATGCTTTCAACCCGAT...TACTACAGCAAGGCTTCTGTGTACTTGCCGGAAACGAAGGGAGGTCCTGCTCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CAA 90 bp CCCCCAAGTAATGCAGACCATGGTCACTGTCCCAAGATATCACTTGAACTCCGCTATCTGCACATCGGGTaGAAAGCATTGGTACCACAG +
Preference number: 5 (lower is better)
Translates to: PPSNADHGHCPKISLELRYLHIG*KALVPQ
Trigger: CTGTGGTACCAATGCTTTCAACCCGATGTGCAGATA...GCGGAGTTCAAGTGATATCTTGGGACAGTGACCATGGTCTGCATTACTTGGGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103241.8
CDS-3UTR CAA 90 bp AGTGAGCAGGACCTCCCTTCGTTTCCGGCAAGTACACAGAAGCCTTGCTGTAGTCGGGAATACACAGCCTaGCCTAAGTTATTATGTTCC +
Preference number: 5 (lower is better)
Translates to: SEQDLPSFPASTQKPCCSREYTA*PKLLCS
Trigger: GGAACATAATAACTTAGGCAAGGCTGTGTATTCCCG...ACTACAGCAAGGCTTCTGTGTACTTGCCGGAAACGAAGGGAGGTCCTGCTCACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CAA 90 bp CATCCCTTCTGCTTCAAACGAAAGAAATGGAGTGAGCAGGACCTCCCTTCGTTTGAACCAGGAATGCTGTaGAGCTGTGTGGTGAAGACC +
Preference number: 5 (lower is better)
Translates to: HPFCFKRKKWSEQDLPSFEPGML*SCVVKT
Trigger: GGTCTTCACCACACAGCTCAACAGCATTCCTGGTTC...AAACGAAGGGAGGTCCTGCTCACTCCATTTCTTTCGTTTGAAGCAGAAGGGATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CAA 90 bp AGTGAGCAGGACCTCCCTTCGTTTCCGGCAAGTACACAGAAGCCTTGCTGTAGTTCTTTGAACCGCCCTTaGAACACTTTCTCAATGTCG +
Preference number: 5 (lower is better)
Translates to: SEQDLPSFPASTQKPCCSSLNRP*NTFSMS
Trigger: CGACATTGAGAAAGTGTTCAAAGGGCGGTTCAAAGA...ACTACAGCAAGGCTTCTGTGTACTTGCCGGAAACGAAGGGAGGTCCTGCTCACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CAA 90 bp AGTACTGTATCAGCTCTTTACACTGGTGAAGGGAGCCTTCCCTGGCTACACATCAGCCAGGCCTTGGTTTaGGTACTTTGTCTTCGGGAA +
Preference number: 5 (lower is better)
Translates to: STVSALYTGEGSLPWLHISQALV*VLCLRE
Trigger: TTCCCGAAGACAAAGTACCAAAACCAAGGCCTGGCT...GATGTGTAGCCAGGGAAGGCTCCCTTCACCAGTGTAAAGAGCTGATACAGTACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CAA 90 bp GAAGGGAGCCTTCCCTGGCTACACATCCCTTCTGCTTCAAACGAAAGAAATGGAAGCCAGGCCTTGGTTTaGGTACTTTGTCTTCGGGAA +
Preference number: 5 (lower is better)
Translates to: EGSLPWLHIPSASNERNGSQALV*VLCLRE
Trigger: TTCCCGAAGACAAAGTACCAAAACCAAGGCCTGGCT...TCCATTTCTTTCGTTTGAAGCAGAAGGGATGTGTAGCCAGGGAAGGCTCCCTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CAA 90 bp CATGTGGCAAGTTCTGGTGTTACCAAAGTGACAGAGTTTCTTTGGCTACTTGTTTCTGCGAGGCCGTGTTaGGCACAACAGCCAGGCCTT +
Preference number: 5 (lower is better)
Translates to: HVASSGVTKVTEFLWLLVSARPC*AQQPGL
Trigger: AAGGCCTGGCTGTTGTGCCAAACACGGCCTCGCAGA...AACAAGTAGCCAAAGAAACTCTGTCACTTTGGTAACACCAGAACTTGCCACATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CAA 90 bp CTGGCTACACATCCCTTCTGCTTCAAACGAAAGAAATGGAGTGAGCAGGACCTCAGCTTCTTTTCGGCTTaGTGGGCATTCGAGTTGGAG +
Preference number: 5 (lower is better)
Translates to: LATHPFCFKRKKWSEQDLSFFSA*WAFELE
Trigger: CTCCAACTCGAATGCCCACAAAGCCGAAAAGAAGCT...GAGGTCCTGCTCACTCCATTTCTTTCGTTTGAAGCAGAAGGGATGTGTAGCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CAA 90 bp GTGAGCAGGACCTCCCTTCGTTTCCGGCAAGTACACAGAAGCCTTGCTGTAGTATGCTTCAGGAGATCATaGAGAGTATTCCTGGAATCC +
Preference number: 5 (lower is better)
Translates to: VSRTSLRFRQVHRSLAVVCFRRS*RVFLES
Trigger: GGATTCCAGGAATACTCTCAATGATCTCCTGAAGCA...TACTACAGCAAGGCTTCTGTGTACTTGCCGGAAACGAAGGGAGGTCCTGCTCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CAA 90 bp GTACCCTCACAGCTTCCTCGCAACAGCAGGGACAGGATAAAGCCACACGGGAATCTTTGGGGTTACTGTTaGGGTCATTTAGATGCTTCA +
Preference number: 5 (lower is better)
Translates to: VPSQLPRNSRDRIKPHGNLWGYC*GHLDAS
Trigger: TGAAGCATCTAAATGACCCAAACAGTAACCCCAAAG...ATTCCCGTGTGGCTTTATCCTGTCCCTGCTGTTGCGAGGAAGCTGTGAGGGTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CAA 90 bp CATGTGGCAAGTTCTGGTGTTACCAAAGTGACAGAGTTTCTTTGGCTACTTGTTTCCCGGTTAGGGACCTaGGGTGGGACCTCAGCCATT +
Preference number: 5 (lower is better)
Translates to: HVASSGVTKVTEFLWLLVSRLGT*GGTSAI
Trigger: AATGGCTGAGGTCCCACCCAAGGTCCCTAACCGGGA...AACAAGTAGCCAAAGAAACTCTGTCACTTTGGTAACACCAGAACTTGCCACATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CAA 90 bp GTGGCAAGTTCTGGTGTTACCAAAGTGACAGAGTTTCTTTGGCTACTTGTTTCTTCCCGGTTAGGGACCTaGGGTGGGACCTCAGCCATT +
Preference number: 5 (lower is better)
Translates to: VASSGVTKVTEFLWLLVSSRLGT*GGTSAI
Trigger: AATGGCTGAGGTCCCACCCAAGGTCCCTAACCGGGA...AGAAACAAGTAGCCAAAGAAACTCTGTCACTTTGGTAACACCAGAACTTGCCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CAA 90 bp CCCCCAAGTAATGCAGACCATGGTCACTGTCCCAAGATATCACTTGAACTCCGCCATCTACTCTCTTGGTaGGACTATTTCTGGGGAGTG +
Preference number: 5 (lower is better)
Translates to: PPSNADHGHCPKISLELRHLLSW*DYFWGV
Trigger: CACTCCCCAGAAATAGTCCAACCAAGAGAGTAGATG...GCGGAGTTCAAGTGATATCTTGGGACAGTGACCATGGTCTGCATTACTTGGGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103241.8
CDS-3UTR CAA 90 bp AGTGAGCAGGACCTCCCTTCGTTTCCGGCAAGTACACAGAAGCCTTGCTGTAGTACCGTACACCAGATGTaGGACCGCCAAATATTTTGT +
Preference number: 5 (lower is better)
Translates to: SEQDLPSFPASTQKPCCSTVHQM*DRQIFC
Trigger: ACAAAATATTTGGCGGTCCAACATCTGGTGTACGGT...ACTACAGCAAGGCTTCTGTGTACTTGCCGGAAACGAAGGGAGGTCCTGCTCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000078621.12
CDS TCA 90 bp AAAGCGGCAAACACGCAGGTGATGAGGACATTCATGTGGACCATCTaGTTGGATTCTCCAGACTGGACTTCCCACCGTACACCTGATATA +
Preference number: 5 (lower is better)
Translates to: KAANTQVMRTFMWTI*LDSPDWTSHRTPDI
Trigger: TATATCAGGTGTACGGTGGGAAGTCCAGTCTGGAGAATCCAATCAGATGGTCCACATGAATGTCCTCATCACCTGCGTGTTTGCCGCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103240.9
CDS-3UTR CAA 90 bp GTGAGCAGGACCTCCCTTCGTTTCCGGCAAGTACACAGAAGCCTTGCTGTAGTAGTTCACTGTATAGACTaGATCCCTGCCAGCAATATA +
Preference number: 5 (lower is better)
Translates to: VSRTSLRFRQVHRSLAVVVHCID*IPASNI
Trigger: TATATTGCTGGCAGGGATCAAGTCTATACAGTGAAC...TACTACAGCAAGGCTTCTGTGTACTTGCCGGAAACGAAGGGAGGTCCTGCTCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CAA 90 bp AGTGAGCAGGACCTCCCTTCGTTTCCGGCAAGTACACAGAAGCCTTGCTGTAGTGTTCACTGTATAGACTaGATCCCTGCCAGCAATATA +
Preference number: 5 (lower is better)
Translates to: SEQDLPSFPASTQKPCCSVHCID*IPASNI
Trigger: TATATTGCTGGCAGGGATCAAGTCTATACAGTGAAC...ACTACAGCAAGGCTTCTGTGTACTTGCCGGAAACGAAGGGAGGTCCTGCTCACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CAA 90 bp GTGAGCAGGACCTCCCTTCGTTTCCGGCAAGTACACAGAAGCCTTGCTGTAGTAAGGAAGTGTGGTTCTTaGATCCACTTGGAATCGTAT +
Preference number: 5 (lower is better)
Translates to: VSRTSLRFRQVHRSLAVVRKCGS*IHLESY
Trigger: ATACGATTCCAAGTGGATCAAAGAACCACACTTCCT...TACTACAGCAAGGCTTCTGTGTACTTGCCGGAAACGAAGGGAGGTCCTGCTCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CAA 90 bp CCTTCTGCTTCAAACGAAAGAAATGGAGTGAGCAGGACCTCCCTTCGTTTCCGGCGGGAATACACAGCCTaGCCTAAGTTATTATGTTCC +
Preference number: 5 (lower is better)
Translates to: PSASNERNGVSRTSLRFRREYTA*PKLLCS
Trigger: GGAACATAATAACTTAGGCAAGGCTGTGTATTCCCG...CCGGAAACGAAGGGAGGTCCTGCTCACTCCATTTCTTTCGTTTGAAGCAGAAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CAA 90 bp GGAATGTTTATCATGGCAAGGGTGGGTGCTGCTTCTGATCCTGGAGGGAAGGGGGGGGATGCCATTGATTaGGATTATGTCTGTTATAGA +
Preference number: 5 (lower is better)
Translates to: GMFIMARVGAASDPGGKGGDAID*DYVCYR
Trigger: TCTATAACAGACATAATCCAAATCAATGGCATCCCC...CCCCTTCCCTCCAGGATCAGAAGCAGCACCCACCCTTGCCATGATAAACATTCC
49% GC, longest homopolymer 8 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103241.8
CDS-3UTR CAA 90 bp CATCCCTTCTGCTTCAAACGAAAGAAATGGAGTGAGCAGGACCTCCCTTCGTTTAGCTTCTTTTCGGCTTaGTGGGCATTCGAGTTGGAG +
Preference number: 5 (lower is better)
Translates to: HPFCFKRKKWSEQDLPSFSFFSA*WAFELE
Trigger: CTCCAACTCGAATGCCCACAAAGCCGAAAAGAAGCT...AAACGAAGGGAGGTCCTGCTCACTCCATTTCTTTCGTTTGAAGCAGAAGGGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CAA 90 bp GTGAGCAGGACCTCCCTTCGTTTCCGGCAAGTACACAGAAGCCTTGCTGTAGTACTTTGGGGTTACTGTTaGGGTCATTTAGATGCTTCA +
Preference number: 5 (lower is better)
Translates to: VSRTSLRFRQVHRSLAVVLWGYC*GHLDAS
Trigger: TGAAGCATCTAAATGACCCAAACAGTAACCCCAAAG...TACTACAGCAAGGCTTCTGTGTACTTGCCGGAAACGAAGGGAGGTCCTGCTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CAA 90 bp AGTACTGTATCAGCTCTTTACACTGGTGAAGGGAGCCTTCCCTGGCTACACATCCATCTACTCTCTTGGTaGGACTATTTCTGGGGAGTG +
Preference number: 5 (lower is better)
Translates to: STVSALYTGEGSLPWLHIHLLSW*DYFWGV
Trigger: CACTCCCCAGAAATAGTCCAACCAAGAGAGTAGATG...GATGTGTAGCCAGGGAAGGCTCCCTTCACCAGTGTAAAGAGCTGATACAGTACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CAA 90 bp CTTCCCTGGCTACACATCCCTTCTGCTTCAAACGAAAGAAATGGAGTGAGCAGGCATCTACTCTCTTGGTaGGACTATTTCTGGGGAGTG +
Preference number: 5 (lower is better)
Translates to: LPWLHIPSASNERNGVSRHLLSW*DYFWGV
Trigger: CACTCCCCAGAAATAGTCCAACCAAGAGAGTAGATG...CCTGCTCACTCCATTTCTTTCGTTTGAAGCAGAAGGGATGTGTAGCCAGGGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CAA 90 bp CATCCCTTCTGCTTCAAACGAAAGAAATGGAGTGAGCAGGACCTCCCTTCGTTTGGGACATCTACTCTCTaGGTTGGACTATTTCTGGGG +
Preference number: 5 (lower is better)
Translates to: HPFCFKRKKWSEQDLPSFGTSTL*VGLFLG
Trigger: CCCCAGAAATAGTCCAACCAAGAGAGTAGATGTCCC...AAACGAAGGGAGGTCCTGCTCACTCCATTTCTTTCGTTTGAAGCAGAAGGGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CAA 90 bp ATCCTGGAGGGAAGGGGCGGCGTTGCTCAACAACAAATCGCTCTAGGTGGCTTTTTTGTGATAACCCCTTaGTCTTTCCAGAGAAGTCAT +
Preference number: 5 (lower is better)
Translates to: ILEGRGGVAQQQIALGGFFVITP*SFQRSH
Trigger: ATGACTTCTCTGGAAAGACAAAGGGGTTATCACAAA...AAAGCCACCTAGAGCGATTTGTTGTTGAGCAACGCCGCCCCTTCCCTCCAGGAT
49% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103241.8
CDS-3UTR CAA 90 bp GGAATGTTTATCATGGCAAGGGTGGGTGCTGCTTCTGATCCTGGAGGGAAGGGGTTTGTGATAACCCCTTaGTCTTTCCAGAGAAGTCAT +
Preference number: 5 (lower is better)
Translates to: GMFIMARVGAASDPGGKGFVITP*SFQRSH
Trigger: ATGACTTCTCTGGAAAGACAAAGGGGTTATCACAAA...CCCCTTCCCTCCAGGATCAGAAGCAGCACCCACCCTTGCCATGATAAACATTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103241.8
CDS-3UTR CAA 90 bp GCAAACAACATTGTTGGTGGCAGATGTGTAGTGCTTATTGTTGGTTGGTTTAATCCACCTTCGCCCCTGTaGGGGTGGGCATATAGCCTC +
Preference number: 5 (lower is better)
Translates to: ANNIVGGRCVVLIVGWFNPPSPL*GWAYSL
Trigger: GAGGCTATATGCCCACCCCAACAGGGGCGAAGGTGG...ATTAAACCAACCAACAATAAGCACTACACATCTGCCACCAACAATGTTGTTTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103241.8
CDS-3UTR CAA 90 bp CTGGCTACACATCCCTTCTGCTTCAAACGAAAGAAATGGAGTGAGCAGGACCTCTCTGACAGATGTGGTTaGCGGAACAAAGGAAGGCTT +
Preference number: 5 (lower is better)
Translates to: LATHPFCFKRKKWSEQDLSDRCG*RNKGRL
Trigger: AAGCCTTCCTTTGTTCCGCAAACCACATCTGTCAGA...GAGGTCCTGCTCACTCCATTTCTTTCGTTTGAAGCAGAAGGGATGTGTAGCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CAA 90 bp CTTCCCTGGCTACACATCCCTTCTGCTTCAAACGAAAGAAATGGAGTGAGCAGGTCTGACAGATGTGGTTaGCGGAACAAAGGAAGGCTT +
Preference number: 5 (lower is better)
Translates to: LPWLHIPSASNERNGVSRSDRCG*RNKGRL
Trigger: AAGCCTTCCTTTGTTCCGCAAACCACATCTGTCAGA...CCTGCTCACTCCATTTCTTTCGTTTGAAGCAGAAGGGATGTGTAGCCAGGGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS GCA 90 bp ACTTTGTCTTCGGGAACTGCTGTCCAAACAGAGTCTGGGGTTTTCTaGTCTTTGAACCGCCCTTTGAACACTTTCTCAATGTCGTCCATG +
Preference number: 5 (lower is better)
Translates to: TLSSGTAVQTESGVF*SLNRPLNTFSMSSM
Trigger: CATGGACGACATTGAGAAAGTGTTCAAAGGGCGGTTCAAAGAGCAGAAAACCCCAGACTCTGTTTGGACAGCAGTTCCCGAAGACAAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103238.2
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS CCA 90 bp GTAATGAGACCACCTTTCTGTCCTCCTCACTCTCGGCGCTGCACTTaGCTGGGTTATAAGCTTCAATCTCTTCGAGTAATACACTGTCAT +
Preference number: 5 (lower is better)
Translates to: VMRPPFCPPHSRRCT*LGYKLQSLRVIHCH
Trigger: ATGACAGTGTATTACTCGAAGAGATTGAAGCTTATAACCCAGCCAAGTGCAGCGCCGAGAGTGAGGAGGACAGAAAGGTGGTCTCATTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103238.2
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS CCA 90 bp GATCCATGCTCTGAAGCTTCTTTTCGGCTTTGTGGGCATTCGAGTTaGAGAAGGATGTATTGTAGTCGTGAGTGGCGTTTGGAAGAACGA +
Preference number: 5 (lower is better)
Translates to: DPCSEASFRLCGHSS*RRMYCSREWRLEER
Trigger: TCGTTCTTCCAAACGCCACTCACGACTACAATACATCCTTCTCCAACTCGAATGCCCACAAAGCCGAAAAGAAGCTTCAGAGCATGGATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103238.2
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CAA 90 bp CCTTCTGCTTCAAACGAAAGAAATGGAGTGAGCAGGACCTCCCTTCGTTTCCGGAAACCGGATATTGCCTaGAATAGTGATAGTCAACCG +
Preference number: 5 (lower is better)
Translates to: PSASNERNGVSRTSLRFRKPDIA*NSDSQP
Trigger: CGGTTGACTATCACTATTCAAGGCAATATCCGGTTT...CCGGAAACGAAGGGAGGTCCTGCTCACTCCATTTCTTTCGTTTGAAGCAGAAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CAA 90 bp CCTTCTGCTTCAAACGAAAGAAATGGAGTGAGCAGGACCTCCCTTCGTTTCCGGGTTCACTGTATAGACTaGATCCCTGCCAGCAATATA +
Preference number: 5 (lower is better)
Translates to: PSASNERNGVSRTSLRFRVHCID*IPASNI
Trigger: TATATTGCTGGCAGGGATCAAGTCTATACAGTGAAC...CCGGAAACGAAGGGAGGTCCTGCTCACTCCATTTCTTTCGTTTGAAGCAGAAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CAA 90 bp GTACACAGAAGCCTTGCTGTAGTAGCTACATGTGGCAAGTTCTGGTGTTACCAAACGTCAGCTTCTTGCTaGGTATCACCTCTGTTTGGG +
Preference number: 5 (lower is better)
Translates to: VHRSLAVVATCGKFWCYQTSASC*VSPLFG
Trigger: CCCAAACAGAGGTGATACCAAGCAAGAAGCTGACGT...TTGGTAACACCAGAACTTGCCACATGTAGCTACTACAGCAAGGCTTCTGTGTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CAA 90 bp ATCCTGGAGGGAAGGGGCGGCGTTGCTCAACAACAAATCGCTCTAGGTGGCTTTAAGACTTTGATGAAGTaGTGGCATTCATCTTTATGC +
Preference number: 5 (lower is better)
Translates to: ILEGRGGVAQQQIALGGFKTLMK*WHSSLC
Trigger: GCATAAAGATGAATGCCACAACTTCATCAAAGTCTT...AAAGCCACCTAGAGCGATTTGTTGTTGAGCAACGCCGCCCCTTCCCTCCAGGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103241.8
CDS-3UTR CAA 90 bp GAAGGGAGCCTTCCCTGGCTACACATCCCTTCTGCTTCAAACGAAAGAAATGGAATCGGGTTGAAAGCATaGGTACCACAGACAAAAACC +
Preference number: 5 (lower is better)
Translates to: EGSLPWLHIPSASNERNGIGLKA*VPQTKT
Trigger: GGTTTTTGTCTGTGGTACCAATGCTTTCAACCCGAT...TCCATTTCTTTCGTTTGAAGCAGAAGGGATGTGTAGCCAGGGAAGGCTCCCTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CAA 90 bp CTGGCTACACATCCCTTCTGCTTCAAACGAAAGAAATGGAGTGAGCAGGACCTCATCGGGTTGAAAGCATaGGTACCACAGACAAAAACC +
Preference number: 5 (lower is better)
Translates to: LATHPFCFKRKKWSEQDLIGLKA*VPQTKT
Trigger: GGTTTTTGTCTGTGGTACCAATGCTTTCAACCCGAT...GAGGTCCTGCTCACTCCATTTCTTTCGTTTGAAGCAGAAGGGATGTGTAGCCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CAA 90 bp GCTACATGTGGCAAGTTCTGGTGTTACCAAAGTGACAGAGTTTCTTTGGCTACTGCAAAGAGGGCGACATaGGTTTGTCGGGCATCAAAC +
Preference number: 5 (lower is better)
Translates to: ATCGKFWCYQSDRVSLATAKRAT*VCRASN
Trigger: GTTTGATGCCCGACAAACCAATGTCGCCCTCTTTGC...AGTAGCCAAAGAAACTCTGTCACTTTGGTAACACCAGAACTTGCCACATGTAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CAA 90 bp ATCCTGGAGGGAAGGGGCGGCGTTGCTCAACAACAAATCGCTCTAGGTGGCTTTGGTTCTTTGATCCACTaGGAATCGTATTTTATTGTG +
Preference number: 5 (lower is better)
Translates to: ILEGRGGVAQQQIALGGFGSLIH*ESYFIV
Trigger: CACAATAAAATACGATTCCAAGTGGATCAAAGAACC...AAAGCCACCTAGAGCGATTTGTTGTTGAGCAACGCCGCCCCTTCCCTCCAGGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103241.8
CDS-3UTR CAA 90 bp GCTACATGTGGCAAGTTCTGGTGTTACCAAAGTGACAGAGTTTCTTTGGCTACTGAACCAGGAATGCTGTaGAGCTGTGTGGTGAAGACC +
Preference number: 5 (lower is better)
Translates to: ATCGKFWCYQSDRVSLATEPGML*SCVVKT
Trigger: GGTCTTCACCACACAGCTCAACAGCATTCCTGGTTC...AGTAGCCAAAGAAACTCTGTCACTTTGGTAACACCAGAACTTGCCACATGTAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CAA 90 bp AGTACTGTATCAGCTCTTTACACTGGTGAAGGGAGCCTTCCCTGGCTACACATCTCTTTGAACCGCCCTTaGAACACTTTCTCAATGTCG +
Preference number: 5 (lower is better)
Translates to: STVSALYTGEGSLPWLHISLNRP*NTFSMS
Trigger: CGACATTGAGAAAGTGTTCAAAGGGCGGTTCAAAGA...GATGTGTAGCCAGGGAAGGCTCCCTTCACCAGTGTAAAGAGCTGATACAGTACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CAA 90 bp GCTACATGTGGCAAGTTCTGGTGTTACCAAAGTGACAGAGTTTCTTTGGCTACTTTCTGCTGGTATTCCTaGACGGGGCTGTCAAAGAGG +
Preference number: 5 (lower is better)
Translates to: ATCGKFWCYQSDRVSLATFCWYS*TGLSKR
Trigger: CCTCTTTGACAGCCCCGTCAAGGAATACCAGCAGAA...AGTAGCCAAAGAAACTCTGTCACTTTGGTAACACCAGAACTTGCCACATGTAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CAA 90 bp ACACAGAAGCCTTGCTGTAGTAGCTACATGTGGCAAGTTCTGGTGTTACCAAAGAGCTTCTTTTCGGCTTaGTGGGCATTCGAGTTGGAG +
Preference number: 5 (lower is better)
Translates to: TQKPCCSSYMWQVLVLPKSFFSA*WAFELE
Trigger: CTCCAACTCGAATGCCCACAAAGCCGAAAAGAAGCT...CTTTGGTAACACCAGAACTTGCCACATGTAGCTACTACAGCAAGGCTTCTGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CAA 90 bp CTTCCCTGGCTACACATCCCTTCTGCTTCAAACGAAAGAAATGGAGTGAGCAGGTGCTTCAGGAGATCATaGAGAGTATTCCTGGAATCC +
Preference number: 5 (lower is better)
Translates to: LPWLHIPSASNERNGVSRCFRRS*RVFLES
Trigger: GGATTCCAGGAATACTCTCAATGATCTCCTGAAGCA...CCTGCTCACTCCATTTCTTTCGTTTGAAGCAGAAGGGATGTGTAGCCAGGGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CAA 90 bp CCCCCAAGTAATGCAGACCATGGTCACTGTCCCAAGATATCACTTGAACTCCGCCTTTGGGGTTACTGTTaGGGTCATTTAGATGCTTCA +
Preference number: 5 (lower is better)
Translates to: PPSNADHGHCPKISLELRLWGYC*GHLDAS
Trigger: TGAAGCATCTAAATGACCCAAACAGTAACCCCAAAG...GCGGAGTTCAAGTGATATCTTGGGACAGTGACCATGGTCTGCATTACTTGGGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103241.8
CDS-3UTR CAA 90 bp CATGTGGCAAGTTCTGGTGTTACCAAAGTGACAGAGTTTCTTTGGCTACTTGTTTTTCCAGAGAAGTCATaGGCACCCCAGGAGTGGTGG +
Preference number: 5 (lower is better)
Translates to: HVASSGVTKVTEFLWLLVFPEKS*APQEWW
Trigger: CCACCACTCCTGGGGTGCCAATGACTTCTCTGGAAA...AACAAGTAGCCAAAGAAACTCTGTCACTTTGGTAACACCAGAACTTGCCACATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CAA 90 bp AATGGAGTGAGCAGGACCTCCCTTCGTTTCCGGCAAGTACACAGAAGCCTTGCTTTTGTGATAACCCCTTaGTCTTTCCAGAGAAGTCAT +
Preference number: 5 (lower is better)
Translates to: NGVSRTSLRFRQVHRSLAFVITP*SFQRSH
Trigger: ATGACTTCTCTGGAAAGACAAAGGGGTTATCACAAA...AGCAAGGCTTCTGTGTACTTGCCGGAAACGAAGGGAGGTCCTGCTCACTCCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CAA 90 bp GTGAGCAGGACCTCCCTTCGTTTCCGGCAAGTACACAGAAGCCTTGCTGTAGTATTTGTGATAACCCCTTaGTCTTTCCAGAGAAGTCAT +
Preference number: 5 (lower is better)
Translates to: VSRTSLRFRQVHRSLAVVFVITP*SFQRSH
Trigger: ATGACTTCTCTGGAAAGACAAAGGGGTTATCACAAA...TACTACAGCAAGGCTTCTGTGTACTTGCCGGAAACGAAGGGAGGTCCTGCTCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CAA 90 bp CTTCCCTGGCTACACATCCCTTCTGCTTCAAACGAAAGAAATGGAGTGAGCAGGGAACAAAGGAAGGCTTaGGTGGCACATCAGGTTTTA +
Preference number: 5 (lower is better)
Translates to: LPWLHIPSASNERNGVSREQRKA*VAHQVL
Trigger: TAAAACCTGATGTGCCACCAAAGCCTTCCTTTGTTC...CCTGCTCACTCCATTTCTTTCGTTTGAAGCAGAAGGGATGTGTAGCCAGGGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CAA 90 bp AGTACTGTATCAGCTCTTTACACTGGTGAAGGGAGCCTTCCCTGGCTACACATCGAACAAAGGAAGGCTTaGGTGGCACATCAGGTTTTA +
Preference number: 5 (lower is better)
Translates to: STVSALYTGEGSLPWLHIEQRKA*VAHQVL
Trigger: TAAAACCTGATGTGCCACCAAAGCCTTCCTTTGTTC...GATGTGTAGCCAGGGAAGGCTCCCTTCACCAGTGTAAAGAGCTGATACAGTACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CAA 90 bp CATCCCTTCTGCTTCAAACGAAAGAAATGGAGTGAGCAGGACCTCCCTTCGTTTTCTGACAGATGTGGTTaGCGGAACAAAGGAAGGCTT +
Preference number: 5 (lower is better)
Translates to: HPFCFKRKKWSEQDLPSFSDRCG*RNKGRL
Trigger: AAGCCTTCCTTTGTTCCGCAAACCACATCTGTCAGA...AAACGAAGGGAGGTCCTGCTCACTCCATTTCTTTCGTTTGAAGCAGAAGGGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CAA 90 bp CTTCCCTGGCTACACATCCCTTCTGCTTCAAACGAAAGAAATGGAGTGAGCAGGCCTCCATGTCAGATGTaGGACCGCCAAATATTTTGT +
Preference number: 5 (lower is better)
Translates to: LPWLHIPSASNERNGVSRPPCQM*DRQIFC
Trigger: ACAAAATATTTGGCGGTCCAACATCTGACATGGAGG...CCTGCTCACTCCATTTCTTTCGTTTGAAGCAGAAGGGATGTGTAGCCAGGGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000103239.10
ENSMUST00000103240.9
CDS-3UTR CAA 90 bp AGTACTGTATCAGCTCTTTACACTGGTGAAGGGAGCCTTCCCTGGCTACACATCCCTCCATGTCAGATGTaGGACCGCCAAATATTTTGT +
Preference number: 5 (lower is better)
Translates to: STVSALYTGEGSLPWLHIPPCQM*DRQIFC
Trigger: ACAAAATATTTGGCGGTCCAACATCTGACATGGAGG...GATGTGTAGCCAGGGAAGGCTCCCTTCACCAGTGTAAAGAGCTGATACAGTACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000103239.10
ENSMUST00000103240.9
CDS-3UTR CAA 90 bp CACAGAATGGCAGTCTACATTGAACCCATTTTCAAGTATTTGTTCAGTCTTCTGCTGTGCTGCGATTCGTaGCCTGAAGGGCGTCCTCTA +
Preference number: 5 (lower is better)
Translates to: HRMAVYIEPIFKYLFSLLLCCDS*PEGRPL
Trigger: TAGAGGACGCCCTTCAGGCAACGAATCGCAGCACAG...CAGAAGACTGAACAAATACTTGAAAATGGGTTCAATGTAGACTGCCATTCTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CAA 90 bp GCTACATGTGGCAAGTTCTGGTGTTACCAAAGTGACAGAGTTTCTTTGGCTACTACGTCAGCTTCTTGCTaGGTATCACCTCTGTTTGGG +
Preference number: 5 (lower is better)
Translates to: ATCGKFWCYQSDRVSLATTSASC*VSPLFG
Trigger: CCCAAACAGAGGTGATACCAAGCAAGAAGCTGACGT...AGTAGCCAAAGAAACTCTGTCACTTTGGTAACACCAGAACTTGCCACATGTAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CAA 90 bp GTACACAGAAGCCTTGCTGTAGTAGCTACATGTGGCAAGTTCTGGTGTTACCAATATCTGCACATCGGGTaGAAAGCATTGGTACCACAG +
Preference number: 5 (lower is better)
Translates to: VHRSLAVVATCGKFWCYQYLHIG*KALVPQ
Trigger: CTGTGGTACCAATGCTTTCAACCCGATGTGCAGATA...TTGGTAACACCAGAACTTGCCACATGTAGCTACTACAGCAAGGCTTCTGTGTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CAA 90 bp CTTCCCTGGCTACACATCCCTTCTGCTTCAAACGAAAGAAATGGAGTGAGCAGGTGGAATCGTATTTTATaGTGCGAAGGGCAGATCCAT +
Preference number: 5 (lower is better)
Translates to: LPWLHIPSASNERNGVSRWNRIL*CEGQIH
Trigger: ATGGATCTGCCCTTCGCACAATAAAATACGATTCCA...CCTGCTCACTCCATTTCTTTCGTTTGAAGCAGAAGGGATGTGTAGCCAGGGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CAA 90 bp AGTGAGCAGGACCTCCCTTCGTTTCCGGCAAGTACACAGAAGCCTTGCTGTAGTGGTTCTTTGATCCACTaGGAATCGTATTTTATTGTG +
Preference number: 5 (lower is better)
Translates to: SEQDLPSFPASTQKPCCSGSLIH*ESYFIV
Trigger: CACAATAAAATACGATTCCAAGTGGATCAAAGAACC...ACTACAGCAAGGCTTCTGTGTACTTGCCGGAAACGAAGGGAGGTCCTGCTCACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CAA 90 bp GAAGGGAGCCTTCCCTGGCTACACATCCCTTCTGCTTCAAACGAAAGAAATGGAAGGAAGTGTGGTTCTTaGATCCACTTGGAATCGTAT +
Preference number: 5 (lower is better)
Translates to: EGSLPWLHIPSASNERNGRKCGS*IHLESY
Trigger: ATACGATTCCAAGTGGATCAAAGAACCACACTTCCT...TCCATTTCTTTCGTTTGAAGCAGAAGGGATGTGTAGCCAGGGAAGGCTCCCTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CAA 90 bp CCCCCAAGTAATGCAGACCATGGTCACTGTCCCAAGATATCACTTGAACTCCGCGGGGATGCCATTGATTaGGATTATGTCTGTTATAGA +
Preference number: 5 (lower is better)
Translates to: PPSNADHGHCPKISLELRGDAID*DYVCYR
Trigger: TCTATAACAGACATAATCCAAATCAATGGCATCCCC...GCGGAGTTCAAGTGATATCTTGGGACAGTGACCATGGTCTGCATTACTTGGGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103241.8
CDS-3UTR CAA 90 bp AGTACTGTATCAGCTCTTTACACTGGTGAAGGGAGCCTTCCCTGGCTACACATCACAGTGGGGATGCCATaGATTTGGATTATGTCTGTT +
Preference number: 5 (lower is better)
Translates to: STVSALYTGEGSLPWLHITVGMP*IWIMSV
Trigger: AACAGACATAATCCAAATCAATGGCATCCCCACTGT...GATGTGTAGCCAGGGAAGGCTCCCTTCACCAGTGTAAAGAGCTGATACAGTACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CAA 90 bp GAAGGGAGCCTTCCCTGGCTACACATCCCTTCTGCTTCAAACGAAAGAAATGGAACAGTGGGGATGCCATaGATTTGGATTATGTCTGTT +
Preference number: 5 (lower is better)
Translates to: EGSLPWLHIPSASNERNGTVGMP*IWIMSV
Trigger: AACAGACATAATCCAAATCAATGGCATCCCCACTGT...TCCATTTCTTTCGTTTGAAGCAGAAGGGATGTGTAGCCAGGGAAGGCTCCCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CAA 90 bp CTTCCCTGGCTACACATCCCTTCTGCTTCAAACGAAAGAAATGGAGTGAGCAGGCTTTGGGGTTACTGTTaGGGTCATTTAGATGCTTCA +
Preference number: 5 (lower is better)
Translates to: LPWLHIPSASNERNGVSRLWGYC*GHLDAS
Trigger: TGAAGCATCTAAATGACCCAAACAGTAACCCCAAAG...CCTGCTCACTCCATTTCTTTCGTTTGAAGCAGAAGGGATGTGTAGCCAGGGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CAA 90 bp CTGGCTACACATCCCTTCTGCTTCAAACGAAAGAAATGGAGTGAGCAGGACCTCCTTTGGGGTTACTGTTaGGGTCATTTAGATGCTTCA +
Preference number: 5 (lower is better)
Translates to: LATHPFCFKRKKWSEQDLLWGYC*GHLDAS
Trigger: TGAAGCATCTAAATGACCCAAACAGTAACCCCAAAG...GAGGTCCTGCTCACTCCATTTCTTTCGTTTGAAGCAGAAGGGATGTGTAGCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CAA 90 bp GCTACATGTGGCAAGTTCTGGTGTTACCAAAGTGACAGAGTTTCTTTGGCTACTGGGACATCTACTCTCTaGGTTGGACTATTTCTGGGG +
Preference number: 5 (lower is better)
Translates to: ATCGKFWCYQSDRVSLATGTSTL*VGLFLG
Trigger: CCCCAGAAATAGTCCAACCAAGAGAGTAGATGTCCC...AGTAGCCAAAGAAACTCTGTCACTTTGGTAACACCAGAACTTGCCACATGTAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CAA 90 bp GGTGTTACCAAAGTGACAGAGTTTCTTTGGCTACTTGTTTCTCTTAAAATACAACCACCTTCGCCCCTGTaGGGGTGGGCATATAGCCTC +
Preference number: 5 (lower is better)
Translates to: GVTKVTEFLWLLVSLKIQPPSPL*GWAYSL
Trigger: GAGGCTATATGCCCACCCCAACAGGGGCGAAGGTGG...TTGTATTTTAAGAGAAACAAGTAGCCAAAGAAACTCTGTCACTTTGGTAACACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CAA 90 bp CATCCCTTCTGCTTCAAACGAAAGAAATGGAGTGAGCAGGACCTCCCTTCGTTTGAACAAAGGAAGGCTTaGGTGGCACATCAGGTTTTA +
Preference number: 5 (lower is better)
Translates to: HPFCFKRKKWSEQDLPSFEQRKA*VAHQVL
Trigger: TAAAACCTGATGTGCCACCAAAGCCTTCCTTTGTTC...AAACGAAGGGAGGTCCTGCTCACTCCATTTCTTTCGTTTGAAGCAGAAGGGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS GCA 90 bp CATTCATCTTTATGCTTGCCTTTCATAGCACAATTTTCTCGATCCTaGTGTCTGGACCTCCACGTCAGCTTCTTGCTTGGTATCACCTCT +
Preference number: 5 (lower is better)
Translates to: HSSLCLPFIAQFSRS*CLDLHVSFLLGITS
Trigger: AGAGGTGATACCAAGCAAGAAGCTGACGTGGAGGTCCAGACAGCAGGATCGAGAAAATTGTGCTATGAAAGGCAAGCATAAAGATGAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103238.2
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS CCA 90 bp TGGTTTTGGTACTTTGTCTTCGGGAACTGCTGTCCAAACAGAGTCTaGGGTTTTCTGCTCTTTGAACCGCCCTTTGAACACTTTCTCAAT +
Preference number: 5 (lower is better)
Translates to: WFWYFVFGNCCPNRV*GFLLFEPPFEHFLN
Trigger: ATTGAGAAAGTGTTCAAAGGGCGGTTCAAAGAGCAGAAAACCCCAGACTCTGTTTGGACAGCAGTTCCCGAAGACAAAGTACCAAAACCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103238.2
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CAA 90 bp GCTACATGTGGCAAGTTCTGGTGTTACCAAAGTGACAGAGTTTCTTTGGCTACTTATCTGCACATCGGGTaGAAAGCATTGGTACCACAG +
Preference number: 5 (lower is better)
Translates to: ATCGKFWCYQSDRVSLATYLHIG*KALVPQ
Trigger: CTGTGGTACCAATGCTTTCAACCCGATGTGCAGATA...AGTAGCCAAAGAAACTCTGTCACTTTGGTAACACCAGAACTTGCCACATGTAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CAA 90 bp CCTTCTGCTTCAAACGAAAGAAATGGAGTGAGCAGGACCTCCCTTCGTTTCCGGGGTTCTTTGATCCACTaGGAATCGTATTTTATTGTG +
Preference number: 5 (lower is better)
Translates to: PSASNERNGVSRTSLRFRGSLIH*ESYFIV
Trigger: CACAATAAAATACGATTCCAAGTGGATCAAAGAACC...CCGGAAACGAAGGGAGGTCCTGCTCACTCCATTTCTTTCGTTTGAAGCAGAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CAA 90 bp CATCCCTTCTGCTTCAAACGAAAGAAATGGAGTGAGCAGGACCTCCCTTCGTTTAGGAAGTGTGGTTCTTaGATCCACTTGGAATCGTAT +
Preference number: 5 (lower is better)
Translates to: HPFCFKRKKWSEQDLPSFRKCGS*IHLESY
Trigger: ATACGATTCCAAGTGGATCAAAGAACCACACTTCCT...AAACGAAGGGAGGTCCTGCTCACTCCATTTCTTTCGTTTGAAGCAGAAGGGATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CAA 90 bp CTTCCCTGGCTACACATCCCTTCTGCTTCAAACGAAAGAAATGGAGTGAGCAGGGGGGATGCCATTGATTaGGATTATGTCTGTTATAGA +
Preference number: 5 (lower is better)
Translates to: LPWLHIPSASNERNGVSRGDAID*DYVCYR
Trigger: TCTATAACAGACATAATCCAAATCAATGGCATCCCC...CCTGCTCACTCCATTTCTTTCGTTTGAAGCAGAAGGGATGTGTAGCCAGGGAAG
46% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CAA 90 bp CATGTGGCAAGTTCTGGTGTTACCAAAGTGACAGAGTTTCTTTGGCTACTTGTTAGCCAGGCCTTGGTTTaGGTACTTTGTCTTCGGGAA +
Preference number: 5 (lower is better)
Translates to: HVASSGVTKVTEFLWLLVSQALV*VLCLRE
Trigger: TTCCCGAAGACAAAGTACCAAAACCAAGGCCTGGCT...AACAAGTAGCCAAAGAAACTCTGTCACTTTGGTAACACCAGAACTTGCCACATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CAA 90 bp GGTGTTACCAAAGTGACAGAGTTTCTTTGGCTACTTGTTTCTCTTAAAATACAATCTGCGAGGCCGTGTTaGGCACAACAGCCAGGCCTT +
Preference number: 5 (lower is better)
Translates to: GVTKVTEFLWLLVSLKIQSARPC*AQQPGL
Trigger: AAGGCCTGGCTGTTGTGCCAAACACGGCCTCGCAGA...TTGTATTTTAAGAGAAACAAGTAGCCAAAGAAACTCTGTCACTTTGGTAACACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CAA 90 bp CTACATGTGGCAAGTTCTGGTGTTACCAAAGTGACAGAGTTTCTTTGGCTACTTAGCTTCTTTTCGGCTTaGTGGGCATTCGAGTTGGAG +
Preference number: 5 (lower is better)
Translates to: LHVASSGVTKVTEFLWLLSFFSA*WAFELE
Trigger: CTCCAACTCGAATGCCCACAAAGCCGAAAAGAAGCT...AAGTAGCCAAAGAAACTCTGTCACTTTGGTAACACCAGAACTTGCCACATGTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CAA 90 bp CTACATGTGGCAAGTTCTGGTGTTACCAAAGTGACAGAGTTTCTTTGGCTACTTGGGACATCTACTCTCTaGGTTGGACTATTTCTGGGG +
Preference number: 5 (lower is better)
Translates to: LHVASSGVTKVTEFLWLLGTSTL*VGLFLG
Trigger: CCCCAGAAATAGTCCAACCAAGAGAGTAGATGTCCC...AAGTAGCCAAAGAAACTCTGTCACTTTGGTAACACCAGAACTTGCCACATGTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CAA 90 bp CATGTGGCAAGTTCTGGTGTTACCAAAGTGACAGAGTTTCTTTGGCTACTTGTTGGGACATCTACTCTCTaGGTTGGACTATTTCTGGGG +
Preference number: 5 (lower is better)
Translates to: HVASSGVTKVTEFLWLLVGTSTL*VGLFLG
Trigger: CCCCAGAAATAGTCCAACCAAGAGAGTAGATGTCCC...AACAAGTAGCCAAAGAAACTCTGTCACTTTGGTAACACCAGAACTTGCCACATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CAA 90 bp GTACACAGAAGCCTTGCTGTAGTAGCTACATGTGGCAAGTTCTGGTGTTACCAAGAACAAAGGAAGGCTTaGGTGGCACATCAGGTTTTA +
Preference number: 5 (lower is better)
Translates to: VHRSLAVVATCGKFWCYQEQRKA*VAHQVL
Trigger: TAAAACCTGATGTGCCACCAAAGCCTTCCTTTGTTC...TTGGTAACACCAGAACTTGCCACATGTAGCTACTACAGCAAGGCTTCTGTGTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CAA 90 bp ACACAGAAGCCTTGCTGTAGTAGCTACATGTGGCAAGTTCTGGTGTTACCAAAGGAACAAAGGAAGGCTTaGGTGGCACATCAGGTTTTA +
Preference number: 5 (lower is better)
Translates to: TQKPCCSSYMWQVLVLPKEQRKA*VAHQVL
Trigger: TAAAACCTGATGTGCCACCAAAGCCTTCCTTTGTTC...CTTTGGTAACACCAGAACTTGCCACATGTAGCTACTACAGCAAGGCTTCTGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CAA 90 bp GTACACAGAAGCCTTGCTGTAGTAGCTACATGTGGCAAGTTCTGGTGTTACCAAAAACCGGATATTGCCTaGAATAGTGATAGTCAACCG +
Preference number: 5 (lower is better)
Translates to: VHRSLAVVATCGKFWCYQKPDIA*NSDSQP
Trigger: CGGTTGACTATCACTATTCAAGGCAATATCCGGTTT...TTGGTAACACCAGAACTTGCCACATGTAGCTACTACAGCAAGGCTTCTGTGTAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CAA 90 bp ACACAGAAGCCTTGCTGTAGTAGCTACATGTGGCAAGTTCTGGTGTTACCAAAGGTTCACTGTATAGACTaGATCCCTGCCAGCAATATA +
Preference number: 5 (lower is better)
Translates to: TQKPCCSSYMWQVLVLPKVHCID*IPASNI
Trigger: TATATTGCTGGCAGGGATCAAGTCTATACAGTGAAC...CTTTGGTAACACCAGAACTTGCCACATGTAGCTACTACAGCAAGGCTTCTGTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CAA 90 bp CTGGCTACACATCCCTTCTGCTTCAAACGAAAGAAATGGAGTGAGCAGGACCTCAAGACTTTGATGAAGTaGTGGCATTCATCTTTATGC +
Preference number: 5 (lower is better)
Translates to: LATHPFCFKRKKWSEQDLKTLMK*WHSSLC
Trigger: GCATAAAGATGAATGCCACAACTTCATCAAAGTCTT...GAGGTCCTGCTCACTCCATTTCTTTCGTTTGAAGCAGAAGGGATGTGTAGCCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CAA 90 bp GTACACAGAAGCCTTGCTGTAGTAGCTACATGTGGCAAGTTCTGGTGTTACCAATGGAATCGTATTTTATaGTGCGAAGGGCAGATCCAT +
Preference number: 5 (lower is better)
Translates to: VHRSLAVVATCGKFWCYQWNRIL*CEGQIH
Trigger: ATGGATCTGCCCTTCGCACAATAAAATACGATTCCA...TTGGTAACACCAGAACTTGCCACATGTAGCTACTACAGCAAGGCTTCTGTGTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CAA 90 bp GCTACATGTGGCAAGTTCTGGTGTTACCAAAGTGACAGAGTTTCTTTGGCTACTCGGGAATACACAGCCTaGCCTAAGTTATTATGTTCC +
Preference number: 5 (lower is better)
Translates to: ATCGKFWCYQSDRVSLATREYTA*PKLLCS
Trigger: GGAACATAATAACTTAGGCAAGGCTGTGTATTCCCG...AGTAGCCAAAGAAACTCTGTCACTTTGGTAACACCAGAACTTGCCACATGTAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CAA 90 bp GTACACAGAAGCCTTGCTGTAGTAGCTACATGTGGCAAGTTCTGGTGTTACCAAACAGTGGGGATGCCATaGATTTGGATTATGTCTGTT +
Preference number: 5 (lower is better)
Translates to: VHRSLAVVATCGKFWCYQTVGMP*IWIMSV
Trigger: AACAGACATAATCCAAATCAATGGCATCCCCACTGT...TTGGTAACACCAGAACTTGCCACATGTAGCTACTACAGCAAGGCTTCTGTGTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CAA 90 bp GCTACATGTGGCAAGTTCTGGTGTTACCAAAGTGACAGAGTTTCTTTGGCTACTTCTTTGAACCGCCCTTaGAACACTTTCTCAATGTCG +
Preference number: 5 (lower is better)
Translates to: ATCGKFWCYQSDRVSLATSLNRP*NTFSMS
Trigger: CGACATTGAGAAAGTGTTCAAAGGGCGGTTCAAAGA...AGTAGCCAAAGAAACTCTGTCACTTTGGTAACACCAGAACTTGCCACATGTAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CAA 90 bp GTGGCAAGTTCTGGTGTTACCAAAGTGACAGAGTTTCTTTGGCTACTTGTTTCTCTTGGTTTTGGTACTTaGTCTTCGGGAACTGCTGTC +
Preference number: 5 (lower is better)
Translates to: VASSGVTKVTEFLWLLVSLGFGT*SSGTAV
Trigger: GACAGCAGTTCCCGAAGACAAAGTACCAAAACCAAG...AGAAACAAGTAGCCAAAGAAACTCTGTCACTTTGGTAACACCAGAACTTGCCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CAA 90 bp CTACATGTGGCAAGTTCTGGTGTTACCAAAGTGACAGAGTTTCTTTGGCTACTTCTTGGTTTTGGTACTTaGTCTTCGGGAACTGCTGTC +
Preference number: 5 (lower is better)
Translates to: LHVASSGVTKVTEFLWLLLGFGT*SSGTAV
Trigger: GACAGCAGTTCCCGAAGACAAAGTACCAAAACCAAG...AAGTAGCCAAAGAAACTCTGTCACTTTGGTAACACCAGAACTTGCCACATGTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CAA 90 bp GCAAACAACATTGTTGGTGGCAGATGTGTAGTGCTTATTGTTGGTTGGTTTAATTTCTGCTGGTATTCCTaGACGGGGCTGTCAAAGAGG +
Preference number: 5 (lower is better)
Translates to: ANNIVGGRCVVLIVGWFNFCWYS*TGLSKR
Trigger: CCTCTTTGACAGCCCCGTCAAGGAATACCAGCAGAA...ATTAAACCAACCAACAATAAGCACTACACATCTGCCACCAACAATGTTGTTTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103241.8
CDS-3UTR CAA 90 bp CTACATGTGGCAAGTTCTGGTGTTACCAAAGTGACAGAGTTTCTTTGGCTACTTATCGGGTTGAAAGCATaGGTACCACAGACAAAAACC +
Preference number: 5 (lower is better)
Translates to: LHVASSGVTKVTEFLWLLIGLKA*VPQTKT
Trigger: GGTTTTTGTCTGTGGTACCAATGCTTTCAACCCGAT...AAGTAGCCAAAGAAACTCTGTCACTTTGGTAACACCAGAACTTGCCACATGTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CAA 90 bp CATGTGGCAAGTTCTGGTGTTACCAAAGTGACAGAGTTTCTTTGGCTACTTGTTATCGGGTTGAAAGCATaGGTACCACAGACAAAAACC +
Preference number: 5 (lower is better)
Translates to: HVASSGVTKVTEFLWLLVIGLKA*VPQTKT
Trigger: GGTTTTTGTCTGTGGTACCAATGCTTTCAACCCGAT...AACAAGTAGCCAAAGAAACTCTGTCACTTTGGTAACACCAGAACTTGCCACATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CAA 90 bp CATCCCTTCTGCTTCAAACGAAAGAAATGGAGTGAGCAGGACCTCCCTTCGTTTGGTTCTTTGATCCACTaGGAATCGTATTTTATTGTG +
Preference number: 5 (lower is better)
Translates to: HPFCFKRKKWSEQDLPSFGSLIH*ESYFIV
Trigger: CACAATAAAATACGATTCCAAGTGGATCAAAGAACC...AAACGAAGGGAGGTCCTGCTCACTCCATTTCTTTCGTTTGAAGCAGAAGGGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CAA 90 bp CTACATGTGGCAAGTTCTGGTGTTACCAAAGTGACAGAGTTTCTTTGGCTACTTCGGGAATACACAGCCTaGCCTAAGTTATTATGTTCC +
Preference number: 5 (lower is better)
Translates to: LHVASSGVTKVTEFLWLLREYTA*PKLLCS
Trigger: GGAACATAATAACTTAGGCAAGGCTGTGTATTCCCG...AAGTAGCCAAAGAAACTCTGTCACTTTGGTAACACCAGAACTTGCCACATGTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CAA 90 bp GTACACAGAAGCCTTGCTGTAGTAGCTACATGTGGCAAGTTCTGGTGTTACCAAGGGGATGCCATTGATTaGGATTATGTCTGTTATAGA +
Preference number: 5 (lower is better)
Translates to: VHRSLAVVATCGKFWCYQGDAID*DYVCYR
Trigger: TCTATAACAGACATAATCCAAATCAATGGCATCCCC...TTGGTAACACCAGAACTTGCCACATGTAGCTACTACAGCAAGGCTTCTGTGTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CAA 90 bp CATGTGGCAAGTTCTGGTGTTACCAAAGTGACAGAGTTTCTTTGGCTACTTGTTTCTTTGAACCGCCCTTaGAACACTTTCTCAATGTCG +
Preference number: 5 (lower is better)
Translates to: HVASSGVTKVTEFLWLLVSLNRP*NTFSMS
Trigger: CGACATTGAGAAAGTGTTCAAAGGGCGGTTCAAAGA...AACAAGTAGCCAAAGAAACTCTGTCACTTTGGTAACACCAGAACTTGCCACATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CAA 90 bp GCAAACAACATTGTTGGTGGCAGATGTGTAGTGCTTATTGTTGGTTGGTTTAATAGCCAGGCCTTGGTTTaGGTACTTTGTCTTCGGGAA +
Preference number: 5 (lower is better)
Translates to: ANNIVGGRCVVLIVGWFNSQALV*VLCLRE
Trigger: TTCCCGAAGACAAAGTACCAAAACCAAGGCCTGGCT...ATTAAACCAACCAACAATAAGCACTACACATCTGCCACCAACAATGTTGTTTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103241.8
CDS-3UTR CAA 90 bp CTACATGTGGCAAGTTCTGGTGTTACCAAAGTGACAGAGTTTCTTTGGCTACTTTGCTTCAGGAGATCATaGAGAGTATTCCTGGAATCC +
Preference number: 5 (lower is better)
Translates to: LHVASSGVTKVTEFLWLLCFRRS*RVFLES
Trigger: GGATTCCAGGAATACTCTCAATGATCTCCTGAAGCA...AAGTAGCCAAAGAAACTCTGTCACTTTGGTAACACCAGAACTTGCCACATGTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CAA 90 bp CATGTGGCAAGTTCTGGTGTTACCAAAGTGACAGAGTTTCTTTGGCTACTTGTTTGCTTCAGGAGATCATaGAGAGTATTCCTGGAATCC +
Preference number: 5 (lower is better)
Translates to: HVASSGVTKVTEFLWLLVCFRRS*RVFLES
Trigger: GGATTCCAGGAATACTCTCAATGATCTCCTGAAGCA...AACAAGTAGCCAAAGAAACTCTGTCACTTTGGTAACACCAGAACTTGCCACATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CAA 90 bp CACAGAATGGCAGTCTACATTGAACCCATTTTCAAGTATTTGTTCAGTCTTCTGGGGACATCTACTCTCTaGGTTGGACTATTTCTGGGG +
Preference number: 5 (lower is better)
Translates to: HRMAVYIEPIFKYLFSLLGTSTL*VGLFLG
Trigger: CCCCAGAAATAGTCCAACCAAGAGAGTAGATGTCCC...CAGAAGACTGAACAAATACTTGAAAATGGGTTCAATGTAGACTGCCATTCTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CAA 90 bp GTACACAGAAGCCTTGCTGTAGTAGCTACATGTGGCAAGTTCTGGTGTTACCAATTTGTGATAACCCCTTaGTCTTTCCAGAGAAGTCAT +
Preference number: 5 (lower is better)
Translates to: VHRSLAVVATCGKFWCYQFVITP*SFQRSH
Trigger: ATGACTTCTCTGGAAAGACAAAGGGGTTATCACAAA...TTGGTAACACCAGAACTTGCCACATGTAGCTACTACAGCAAGGCTTCTGTGTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CAA 90 bp GTACACAGAAGCCTTGCTGTAGTAGCTACATGTGGCAAGTTCTGGTGTTACCAAAAGACTTTGATGAAGTaGTGGCATTCATCTTTATGC +
Preference number: 5 (lower is better)
Translates to: VHRSLAVVATCGKFWCYQKTLMK*WHSSLC
Trigger: GCATAAAGATGAATGCCACAACTTCATCAAAGTCTT...TTGGTAACACCAGAACTTGCCACATGTAGCTACTACAGCAAGGCTTCTGTGTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CAA 90 bp GCAAACAACATTGTTGGTGGCAGATGTGTAGTGCTTATTGTTGGTTGGTTTAATTATCTGCACATCGGGTaGAAAGCATTGGTACCACAG +
Preference number: 5 (lower is better)
Translates to: ANNIVGGRCVVLIVGWFNYLHIG*KALVPQ
Trigger: CTGTGGTACCAATGCTTTCAACCCGATGTGCAGATA...ATTAAACCAACCAACAATAAGCACTACACATCTGCCACCAACAATGTTGTTTGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103241.8
CDS-3UTR CAA 90 bp AAATTGCTACAGTTTGGGTCAAAGATTGAATTTTCAGCAAACTGCTTGGTAATCGCAAAGAGGGCGACATaGGTTTGTCGGGCATCAAAC +
Preference number: 5 (lower is better)
Translates to: KLLQFGSKIEFSANCLVIAKRAT*VCRASN
Trigger: GTTTGATGCCCGACAAACCAATGTCGCCCTCTTTGC...GATTACCAAGCAGTTTGCTGAAAATTCAATCTTTGACCCAAACTGTAGCAATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CAA 90 bp GTACACAGAAGCCTTGCTGTAGTAGCTACATGTGGCAAGTTCTGGTGTTACCAAGGTTCTTTGATCCACTaGGAATCGTATTTTATTGTG +
Preference number: 5 (lower is better)
Translates to: VHRSLAVVATCGKFWCYQGSLIH*ESYFIV
Trigger: CACAATAAAATACGATTCCAAGTGGATCAAAGAACC...TTGGTAACACCAGAACTTGCCACATGTAGCTACTACAGCAAGGCTTCTGTGTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CAA 90 bp CTACATGTGGCAAGTTCTGGTGTTACCAAAGTGACAGAGTTTCTTTGGCTACTTAGGAAGTGTGGTTCTTaGATCCACTTGGAATCGTAT +
Preference number: 5 (lower is better)
Translates to: LHVASSGVTKVTEFLWLLRKCGS*IHLESY
Trigger: ATACGATTCCAAGTGGATCAAAGAACCACACTTCCT...AAGTAGCCAAAGAAACTCTGTCACTTTGGTAACACCAGAACTTGCCACATGTAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CAA 90 bp CATGTGGCAAGTTCTGGTGTTACCAAAGTGACAGAGTTTCTTTGGCTACTTGTTAGGAAGTGTGGTTCTTaGATCCACTTGGAATCGTAT +
Preference number: 5 (lower is better)
Translates to: HVASSGVTKVTEFLWLLVRKCGS*IHLESY
Trigger: ATACGATTCCAAGTGGATCAAAGAACCACACTTCCT...AACAAGTAGCCAAAGAAACTCTGTCACTTTGGTAACACCAGAACTTGCCACATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CAA 90 bp GTGGCAAGTTCTGGTGTTACCAAAGTGACAGAGTTTCTTTGGCTACTTGTTTCTACAGTGGGGATGCCATaGATTTGGATTATGTCTGTT +
Preference number: 5 (lower is better)
Translates to: VASSGVTKVTEFLWLLVSTVGMP*IWIMSV
Trigger: AACAGACATAATCCAAATCAATGGCATCCCCACTGT...AGAAACAAGTAGCCAAAGAAACTCTGTCACTTTGGTAACACCAGAACTTGCCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CAA 90 bp GGTGTTACCAAAGTGACAGAGTTTCTTTGGCTACTTGTTTCTCTTAAAATACAATTCTGCTGGTATTCCTaGACGGGGCTGTCAAAGAGG +
Preference number: 5 (lower is better)
Translates to: GVTKVTEFLWLLVSLKIQFCWYS*TGLSKR
Trigger: CCTCTTTGACAGCCCCGTCAAGGAATACCAGCAGAA...TTGTATTTTAAGAGAAACAAGTAGCCAAAGAAACTCTGTCACTTTGGTAACACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CAA 90 bp CACAGAATGGCAGTCTACATTGAACCCATTTTCAAGTATTTGTTCAGTCTTCTGTCTGACAGATGTGGTTaGCGGAACAAAGGAAGGCTT +
Preference number: 5 (lower is better)
Translates to: HRMAVYIEPIFKYLFSLLSDRCG*RNKGRL
Trigger: AAGCCTTCCTTTGTTCCGCAAACCACATCTGTCAGA...CAGAAGACTGAACAAATACTTGAAAATGGGTTCAATGTAGACTGCCATTCTGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CAA 90 bp AAATTGCTACAGTTTGGGTCAAAGATTGAATTTTCAGCAAACTGCTTGGTAATCACGTCAGCTTCTTGCTaGGTATCACCTCTGTTTGGG +
Preference number: 5 (lower is better)
Translates to: KLLQFGSKIEFSANCLVITSASC*VSPLFG
Trigger: CCCAAACAGAGGTGATACCAAGCAAGAAGCTGACGT...GATTACCAAGCAGTTTGCTGAAAATTCAATCTTTGACCCAAACTGTAGCAATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CAA 90 bp AAATTGCTACAGTTTGGGTCAAAGATTGAATTTTCAGCAAACTGCTTGGTAATCAGCCAGGCCTTGGTTTaGGTACTTTGTCTTCGGGAA +
Preference number: 5 (lower is better)
Translates to: KLLQFGSKIEFSANCLVISQALV*VLCLRE
Trigger: TTCCCGAAGACAAAGTACCAAAACCAAGGCCTGGCT...GATTACCAAGCAGTTTGCTGAAAATTCAATCTTTGACCCAAACTGTAGCAATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CAA 90 bp GGTGTTACCAAAGTGACAGAGTTTCTTTGGCTACTTGTTTCTCTTAAAATACAAAGCCAGGCCTTGGTTTaGGTACTTTGTCTTCGGGAA +
Preference number: 5 (lower is better)
Translates to: GVTKVTEFLWLLVSLKIQSQALV*VLCLRE
Trigger: TTCCCGAAGACAAAGTACCAAAACCAAGGCCTGGCT...TTGTATTTTAAGAGAAACAAGTAGCCAAAGAAACTCTGTCACTTTGGTAACACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CAA 90 bp AAATTGCTACAGTTTGGGTCAAAGATTGAATTTTCAGCAAACTGCTTGGTAATCAGCTTCTTTTCGGCTTaGTGGGCATTCGAGTTGGAG +
Preference number: 5 (lower is better)
Translates to: KLLQFGSKIEFSANCLVISFFSA*WAFELE
Trigger: CTCCAACTCGAATGCCCACAAAGCCGAAAAGAAGCT...GATTACCAAGCAGTTTGCTGAAAATTCAATCTTTGACCCAAACTGTAGCAATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CAA 90 bp GTGGCAAGTTCTGGTGTTACCAAAGTGACAGAGTTTCTTTGGCTACTTGTTTCTTTTGTGATAACCCCTTaGTCTTTCCAGAGAAGTCAT +
Preference number: 5 (lower is better)
Translates to: VASSGVTKVTEFLWLLVSFVITP*SFQRSH
Trigger: ATGACTTCTCTGGAAAGACAAAGGGGTTATCACAAA...AGAAACAAGTAGCCAAAGAAACTCTGTCACTTTGGTAACACCAGAACTTGCCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS TCA 90 bp ACACCTGATATAGTATCAGTAAAATCAGAAGTATTTGGGTCATCTTaGACTACAAATTTCCGGGAGCTCGTCAGTTTAGGTCTCCAGGTA +
Preference number: 5 (lower is better)
Translates to: TPDIVSVKSEVFGSS*TTNFRELVSLGLQV
Trigger: TACCTGGAGACCTAAACTGACGAGCTCCCGGAAATTTGTAGTTCAAGATGACCCAAATACTTCTGATTTTACTGATACTATATCAGGTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103240.9
CDS-3UTR CAA 90 bp GCAAACAACATTGTTGGTGGCAGATGTGTAGTGCTTATTGTTGGTTGGTTTAATAAACCGGATATTGCCTaGAATAGTGATAGTCAACCG +
Preference number: 5 (lower is better)
Translates to: ANNIVGGRCVVLIVGWFNKPDIA*NSDSQP
Trigger: CGGTTGACTATCACTATTCAAGGCAATATCCGGTTT...ATTAAACCAACCAACAATAAGCACTACACATCTGCCACCAACAATGTTGTTTGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103241.8
CDS-3UTR CAA 90 bp CACAGAATGGCAGTCTACATTGAACCCATTTTCAAGTATTTGTTCAGTCTTCTGGTTCACTGTATAGACTaGATCCCTGCCAGCAATATA +
Preference number: 5 (lower is better)
Translates to: HRMAVYIEPIFKYLFSLLVHCID*IPASNI
Trigger: TATATTGCTGGCAGGGATCAAGTCTATACAGTGAAC...CAGAAGACTGAACAAATACTTGAAAATGGGTTCAATGTAGACTGCCATTCTGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CAA 90 bp CACAGAATGGCAGTCTACATTGAACCCATTTTCAAGTATTTGTTCAGTCTTCTGTGGAATCGTATTTTATaGTGCGAAGGGCAGATCCAT +
Preference number: 5 (lower is better)
Translates to: HRMAVYIEPIFKYLFSLLWNRIL*CEGQIH
Trigger: ATGGATCTGCCCTTCGCACAATAAAATACGATTCCA...CAGAAGACTGAACAAATACTTGAAAATGGGTTCAATGTAGACTGCCATTCTGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CAA 90 bp CACAGAATGGCAGTCTACATTGAACCCATTTTCAAGTATTTGTTCAGTCTTCTGACAGTGGGGATGCCATaGATTTGGATTATGTCTGTT +
Preference number: 5 (lower is better)
Translates to: HRMAVYIEPIFKYLFSLLTVGMP*IWIMSV
Trigger: AACAGACATAATCCAAATCAATGGCATCCCCACTGT...CAGAAGACTGAACAAATACTTGAAAATGGGTTCAATGTAGACTGCCATTCTGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CAA 90 bp AAATTGCTACAGTTTGGGTCAAAGATTGAATTTTCAGCAAACTGCTTGGTAATCCTTGGTTTTGGTACTTaGTCTTCGGGAACTGCTGTC +
Preference number: 5 (lower is better)
Translates to: KLLQFGSKIEFSANCLVILGFGT*SSGTAV
Trigger: GACAGCAGTTCCCGAAGACAAAGTACCAAAACCAAG...GATTACCAAGCAGTTTGCTGAAAATTCAATCTTTGACCCAAACTGTAGCAATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CAA 90 bp AAATTGCTACAGTTTGGGTCAAAGATTGAATTTTCAGCAAACTGCTTGGTAATCCATCTACTCTCTTGGTaGGACTATTTCTGGGGAGTG +
Preference number: 5 (lower is better)
Translates to: KLLQFGSKIEFSANCLVIHLLSW*DYFWGV
Trigger: CACTCCCCAGAAATAGTCCAACCAAGAGAGTAGATG...GATTACCAAGCAGTTTGCTGAAAATTCAATCTTTGACCCAAACTGTAGCAATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CAA 90 bp GGTGTTACCAAAGTGACAGAGTTTCTTTGGCTACTTGTTTCTCTTAAAATACAACATCTACTCTCTTGGTaGGACTATTTCTGGGGAGTG +
Preference number: 5 (lower is better)
Translates to: GVTKVTEFLWLLVSLKIQHLLSW*DYFWGV
Trigger: CACTCCCCAGAAATAGTCCAACCAAGAGAGTAGATG...TTGTATTTTAAGAGAAACAAGTAGCCAAAGAAACTCTGTCACTTTGGTAACACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CAA 90 bp GGTGTTACCAAAGTGACAGAGTTTCTTTGGCTACTTGTTTCTCTTAAAATACAATCTGACAGATGTGGTTaGCGGAACAAAGGAAGGCTT +
Preference number: 5 (lower is better)
Translates to: GVTKVTEFLWLLVSLKIQSDRCG*RNKGRL
Trigger: AAGCCTTCCTTTGTTCCGCAAACCACATCTGTCAGA...TTGTATTTTAAGAGAAACAAGTAGCCAAAGAAACTCTGTCACTTTGGTAACACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS TCA 90 bp ATACCTGATATAGTATCAGTAAAATCAGAAGTATTTGGGTCATCTTaGACTACAAATTTCCGGGAGCTCGTCAGTTTAGGTCTCCAGGTA +
Preference number: 5 (lower is better)
Translates to: IPDIVSVKSEVFGSS*TTNFRELVSLGLQV
Trigger: TACCTGGAGACCTAAACTGACGAGCTCCCGGAAATTTGTAGTTCAAGATGACCCAAATACTTCTGATTTTACTGATACTATATCAGGTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000077847.12
ENSMUST00000103238.2
ENSMUST00000103239.10
CDS-3UTR CAA 90 bp AAATTGCTACAGTTTGGGTCAAAGATTGAATTTTCAGCAAACTGCTTGGTAATCCGGGAATACACAGCCTaGCCTAAGTTATTATGTTCC +
Preference number: 5 (lower is better)
Translates to: KLLQFGSKIEFSANCLVIREYTA*PKLLCS
Trigger: GGAACATAATAACTTAGGCAAGGCTGTGTATTCCCG...GATTACCAAGCAGTTTGCTGAAAATTCAATCTTTGACCCAAACTGTAGCAATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CAA 90 bp GGTGTTACCAAAGTGACAGAGTTTCTTTGGCTACTTGTTTCTCTTAAAATACAACGGGAATACACAGCCTaGCCTAAGTTATTATGTTCC +
Preference number: 5 (lower is better)
Translates to: GVTKVTEFLWLLVSLKIQREYTA*PKLLCS
Trigger: GGAACATAATAACTTAGGCAAGGCTGTGTATTCCCG...TTGTATTTTAAGAGAAACAAGTAGCCAAAGAAACTCTGTCACTTTGGTAACACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CAA 90 bp GGTGTTACCAAAGTGACAGAGTTTCTTTGGCTACTTGTTTCTCTTAAAATACAAAAACCGGATATTGCCTaGAATAGTGATAGTCAACCG +
Preference number: 5 (lower is better)
Translates to: GVTKVTEFLWLLVSLKIQKPDIA*NSDSQP
Trigger: CGGTTGACTATCACTATTCAAGGCAATATCCGGTTT...TTGTATTTTAAGAGAAACAAGTAGCCAAAGAAACTCTGTCACTTTGGTAACACC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CAA 90 bp GGTGTTACCAAAGTGACAGAGTTTCTTTGGCTACTTGTTTCTCTTAAAATACAAGTTCACTGTATAGACTaGATCCCTGCCAGCAATATA +
Preference number: 5 (lower is better)
Translates to: GVTKVTEFLWLLVSLKIQVHCID*IPASNI
Trigger: TATATTGCTGGCAGGGATCAAGTCTATACAGTGAAC...TTGTATTTTAAGAGAAACAAGTAGCCAAAGAAACTCTGTCACTTTGGTAACACC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CAA 90 bp CACAGAATGGCAGTCTACATTGAACCCATTTTCAAGTATTTGTTCAGTCTTCTGAAGACTTTGATGAAGTaGTGGCATTCATCTTTATGC +
Preference number: 5 (lower is better)
Translates to: HRMAVYIEPIFKYLFSLLKTLMK*WHSSLC
Trigger: GCATAAAGATGAATGCCACAACTTCATCAAAGTCTT...CAGAAGACTGAACAAATACTTGAAAATGGGTTCAATGTAGACTGCCATTCTGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CAA 90 bp GGTGTTACCAAAGTGACAGAGTTTCTTTGGCTACTTGTTTCTCTTAAAATACAATGGAATCGTATTTTATaGTGCGAAGGGCAGATCCAT +
Preference number: 5 (lower is better)
Translates to: GVTKVTEFLWLLVSLKIQWNRIL*CEGQIH
Trigger: ATGGATCTGCCCTTCGCACAATAAAATACGATTCCA...TTGTATTTTAAGAGAAACAAGTAGCCAAAGAAACTCTGTCACTTTGGTAACACC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CAA 90 bp AAATTGCTACAGTTTGGGTCAAAGATTGAATTTTCAGCAAACTGCTTGGTAATCAGGAAGTGTGGTTCTTaGATCCACTTGGAATCGTAT +
Preference number: 5 (lower is better)
Translates to: KLLQFGSKIEFSANCLVIRKCGS*IHLESY
Trigger: ATACGATTCCAAGTGGATCAAAGAACCACACTTCCT...GATTACCAAGCAGTTTGCTGAAAATTCAATCTTTGACCCAAACTGTAGCAATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CAA 90 bp AAATTGCTACAGTTTGGGTCAAAGATTGAATTTTCAGCAAACTGCTTGGTAATCACAGTGGGGATGCCATaGATTTGGATTATGTCTGTT +
Preference number: 5 (lower is better)
Translates to: KLLQFGSKIEFSANCLVITVGMP*IWIMSV
Trigger: AACAGACATAATCCAAATCAATGGCATCCCCACTGT...GATTACCAAGCAGTTTGCTGAAAATTCAATCTTTGACCCAAACTGTAGCAATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CAA 90 bp AAATTGCTACAGTTTGGGTCAAAGATTGAATTTTCAGCAAACTGCTTGGTAATCCTTTGGGGTTACTGTTaGGGTCATTTAGATGCTTCA +
Preference number: 5 (lower is better)
Translates to: KLLQFGSKIEFSANCLVILWGYC*GHLDAS
Trigger: TGAAGCATCTAAATGACCCAAACAGTAACCCCAAAG...GATTACCAAGCAGTTTGCTGAAAATTCAATCTTTGACCCAAACTGTAGCAATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS-3UTR CAA 90 bp AAATTGCTACAGTTTGGGTCAAAGATTGAATTTTCAGCAAACTGCTTGGTAATCAAGACTTTGATGAAGTaGTGGCATTCATCTTTATGC +
Preference number: 5 (lower is better)
Translates to: KLLQFGSKIEFSANCLVIKTLMK*WHSSLC
Trigger: GCATAAAGATGAATGCCACAACTTCATCAAAGTCTT...GATTACCAAGCAGTTTGCTGAAAATTCAATCTTTGACCCAAACTGTAGCAATTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS CAA 72 bp GGAGGGGAGTATAGAGATGCCTCCCGGTTAGGGACCTaGGGTGGGACCTCAGCCATTGGTCCCACCGGGTCC +
Preference number: 6 (lower is better)
Translates to: GGEYRDASRLGT*GGTSAIGPTGS
Trigger: GGACCCGGTGGGACCAATGGCTGAGGTCCCACCCAAGGTCCCTAACCGGGAGGCATCTCTATACTCCCCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103238.2
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS CAA 90 bp AGTGTGGAGGGAGGGGAGTATAGAGATGCCTCCCGGTTAGGGACCTaGGGTGGGACCTCAGCCATTGGTCCCACCGGGTCCAGCATGAGG +
Preference number: 6 (lower is better)
Translates to: SVEGGEYRDASRLGT*GGTSAIGPTGSSMR
Trigger: CCTCATGCTGGACCCGGTGGGACCAATGGCTGAGGTCCCACCCAAGGTCCCTAACCGGGAGGCATCTCTATACTCCCCTCCCTCCACACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103238.2
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS GCA 72 bp ACCGTACACCGTGGCAGTCCCCTAGGTGGGCTGTGTTaGCGTACTCCGTGTCCTGCTCATATCCTCCAGGGC +
Preference number: 6 (lower is better)
Translates to: TVHRGSPLGGLC*RTPCPAHILQG
Trigger: GCCCTGGAGGATATGAGCAGGACACGGAGTACGGCAACACAGCCCACCTAGGGGACTGCCACGGTGTACGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000051419.15
CDS CCA 72 bp GTGGGGAGAGCAGCCAGCTCGGGAGGCTGGCCTCTGTaGTCCACGGCCATGGACTTTGTATCCGTGTTTGGT +
Preference number: 6 (lower is better)
Translates to: VGRAASSGGWPL*STAMDFVSVFG
Trigger: ACCAAACACGGATACAAAGTCCATGGCCGTGGACCACAGAGGCCAGCCTCCCGAGCTGGCTGCTCTCCCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103238.2
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS CCA 72 bp CTCCCGGTTAGGGACCTTGGGTGGGACCTCAGCCATTaGTCCCACCGGGTCCAGCATGAGGGTTTGATGAGC +
Preference number: 6 (lower is better)
Translates to: LPVRDLGWDLSH*SHRVQHEGLMS
Trigger: GCTCATCAAACCCTCATGCTGGACCCGGTGGGACCAATGGCTGAGGTCCCACCCAAGGTCCCTAACCGGGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103238.2
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS CAA 72 bp CACCGTACACCGTGGCAGTCCCCTAGGTGGGCTGTGTaGCCGTACTCCGTGTCCTGCTCATATCCTCCAGGG +
Preference number: 6 (lower is better)
Translates to: HRTPWQSPRWAV*PYSVSCSYPPG
Trigger: CCCTGGAGGATATGAGCAGGACACGGAGTACGGCAACACAGCCCACCTAGGGGACTGCCACGGTGTACGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000103241.8
CDS CAA 90 bp CAGCCAGCTCGGGAGGCTGGCCTCTGTGGTCCACGGCCATGGACTTaGTATCCGTGTTTGGTGGCAGTTCCTTCCGACTGGTCAGCAGGT +
Preference number: 6 (lower is better)
Translates to: QPAREAGLCGPRPWT*YPCLVAVPSDWSAG
Trigger: ACCTGCTGACCAGTCGGAAGGAACTGCCACCAAACACGGATACAAAGTCCATGGCCGTGGACCACAGAGGCCAGCCTCCCGAGCTGGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103238.2
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS GCA 72 bp ACCGTACACCGTGGCAGTCCCCTAGGTGGGCTGTGTTaGCGTACTCCGTGTCCTGCTCATATCCTCCAGGGA +
Preference number: 6 (lower is better)
Translates to: TVHRGSPLGGLC*RTPCPAHILQG
Trigger: TCCCTGGAGGATATGAGCAGGACACGGAGTACGGCAACACAGCCCACCTAGGGGACTGCCACGGTGTACGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076335.12
ENSMUST00000103241.8
CDS GCA 72 bp CCTCCATGTCGTGGCAGTCCCCTAGGTGGGCTGTGTTaGCGTACTCCGTGTCCTGCTCATATCCTCCAGGGA +
Preference number: 6 (lower is better)
Translates to: PPCRGSPLGGLC*RTPCPAHILQG
Trigger: TCCCTGGAGGATATGAGCAGGACACGGAGTACGGCAACACAGCCCACCTAGGGGACTGCCACGACATGGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000077847.12
ENSMUST00000103238.2
CDS CCA 72 bp CCAGCTCGGGAGGCTGGCCTCTGTGGTCCACGGCCATaGACTTTGTATCCGTGTTTGGTGGCAGTTCCTTCC +
Preference number: 6 (lower is better)
Translates to: PAREAGLCGPRP*TLYPCLVAVPS
Trigger: GGAAGGAACTGCCACCAAACACGGATACAAAGTCCATGGCCGTGGACCACAGAGGCCAGCCTCCCGAGCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103238.2
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS CAA 72 bp CGGGAGGCTGGCCTCTGTGGTCCACGGCCATGGACTTaGTATCCGTGTTTGGTGGCAGTTCCTTCCGACTGG +
Preference number: 6 (lower is better)
Translates to: REAGLCGPRPWT*YPCLVAVPSDW
Trigger: CCAGTCGGAAGGAACTGCCACCAAACACGGATACAAAGTCCATGGCCGTGGACCACAGAGGCCAGCCTCCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103238.2
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS CAA 72 bp ACCTCCATGTCGTGGCAGTCCCCTAGGTGGGCTGTGTaGCCGTACTCCGTGTCCTGCTCATATCCTCCAGGG +
Preference number: 6 (lower is better)
Translates to: TSMSWQSPRWAV*PYSVSCSYPPG
Trigger: CCCTGGAGGATATGAGCAGGACACGGAGTACGGCAACACAGCCCACCTAGGGGACTGCCACGACATGGAGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000077847.12
ENSMUST00000103238.2
CDS GCA 72 bp GTCCCGTCCTGGGGAGGGTGCCATTACTGGTATAGCTaGTCTGTCTGGAGAGGGAGGGCTGCAGATGAACAC +
Preference number: 6 (lower is better)
Translates to: VPSWGGCHYWYS*SVWRGRAADEH
Trigger: GTGTTCATCTGCAGCCCTCCCTCTCCAGACAGAGCAGCTATACCAGTAATGGCACCCTCCCCAGGACGGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103238.2
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS GCA 72 bp GCAAACTTTCGTGGCAGTCCCCTAGGTGGGCTGTGTTaGCGTACTCCGTGTCCTGCTCATATCCTCCAGGGC +
Preference number: 6 (lower is better)
Translates to: ANFRGSPLGGLC*RTPCPAHILQG
Trigger: GCCCTGGAGGATATGAGCAGGACACGGAGTACGGCAACACAGCCCACCTAGGGGACTGCCACGAAAGTTTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000078621.12
CDS GCA 72 bp TCCCCTAGGTGGGCTGTGTTGCCGTACTCCGTGTCCTaGTCATATCCTCCAGGGAGCATCCCTAGGGTCACT +
Preference number: 6 (lower is better)
Translates to: SPRWAVLPYSVS*SYPPGSIPRVT
Trigger: AGTGACCCTAGGGATGCTCCCTGGAGGATATGAGCAGGACACGGAGTACGGCAACACAGCCCACCTAGGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000103238.2
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS CCA 72 bp CCGTGTCTTTGTGAACCAGGGCTCATCGGCAATGGGTaGGACGGCAGAGTCCATCAGCGGGTGGGACTTGAT +
Preference number: 6 (lower is better)
Translates to: PCLCEPGLIGNG*DGRVHQRVGLD
Trigger: ATCAAGTCCCACCCGCTGATGGACTCTGCCGTCCCACCCATTGCCGATGAGCCCTGGTTCACAAAGACACGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103238.2
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS CAA 72 bp GGCAAACTTTCGTGGCAGTCCCCTAGGTGGGCTGTGTaGCCGTACTCCGTGTCCTGCTCATATCCTCCAGGG +
Preference number: 6 (lower is better)
Translates to: GKLSWQSPRWAV*PYSVSCSYPPG
Trigger: CCCTGGAGGATATGAGCAGGACACGGAGTACGGCAACACAGCCCACCTAGGGGACTGCCACGAAAGTTTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
CDS CAA 90 bp GATGAGGATACCTCCATGTCGTGGCAGTCCCCTAGGTGGGCTGTGTaGCCGTACTCCGTGTCCTGCTCATATCCTCCAGGGAGCATCCCT +
Preference number: 6 (lower is better)
Translates to: DEDTSMSWQSPRWAV*PYSVSCSYPPGSIP
Trigger: AGGGATGCTCCCTGGAGGATATGAGCAGGACACGGAGTACGGCAACACAGCCCACCTAGGGGACTGCCACGACATGGAGGTATCCTCATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000077847.12
ENSMUST00000103238.2
CDS CAA 90 bp TTCTGCTGGTATTCCTTGACGGGGCTGTCAAAGAGGCCGTTCAGCTaGGCGAAGCTTCCGCTGGAGTCTGTGCACGACTGGGCGGATTCT +
Preference number: 6 (lower is better)
Translates to: FCWYSLTGLSKRPFS*AKLPLESVHDWADS
Trigger: AGAATCCGCCCAGTCGTGCACAGACTCCAGCGGAAGCTTCGCCAAGCTGAACGGCCTCTTTGACAGCCCCGTCAAGGAATACCAGCAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103238.2
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS CAA 90 bp GGGTGGGACCTCAGCCATTGGTCCCACCGGGTCCAGCATGAGGGTTaGATGAGCCATATGGATCTCTCCCAGGATGGCTTTGGGGTTACT +
Preference number: 6 (lower is better)
Translates to: GWDLSHWSHRVQHEG*MSHMDLSQDGFGVT
Trigger: AGTAACCCCAAAGCCATCCTGGGAGAGATCCATATGGCTCATCAAACCCTCATGCTGGACCCGGTGGGACCAATGGCTGAGGTCCCACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103238.2
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS CAA 90 bp GTTGAAGGAGGCAAACTTTCGTGGCAGTCCCCTAGGTGGGCTGTGTaGCCGTACTCCGTGTCCTGCTCATATCCTCCAGGGAGCATCCCT +
Preference number: 6 (lower is better)
Translates to: VEGGKLSWQSPRWAV*PYSVSCSYPPGSIP
Trigger: AGGGATGCTCCCTGGAGGATATGAGCAGGACACGGAGTACGGCAACACAGCCCACCTAGGGGACTGCCACGAAAGTTTGCCTCCTTCAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000103239.10
ENSMUST00000103240.9
CDS TCA 72 bp GTGGGACCTCAGCCATTGGTCCCACCGGGTCCAGCATaGGGGTTTGATGAGCCATATGGATCTCTCCCAGGA +
Preference number: 6 (lower is better)
Translates to: VGPQPLVPPGPA*GFDEPYGSLPG
Trigger: TCCTGGGAGAGATCCATATGGCTCATCAAACCCTCATGCTGGACCCGGTGGGACCAATGGCTGAGGTCCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103238.2
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS GCA 72 bp GGCCGTTCAGCTTGGCGAAGCTTCCGCTGGAGTCTGTaGACGACTGGGCGGATTCTGCGTCTTTATGGATCT +
Preference number: 6 (lower is better)
Translates to: GRSAWRSFRWSL*TTGRILRLYGS
Trigger: AGATCCATAAAGACGCAGAATCCGCCCAGTCGTGCACAGACTCCAGCGGAAGCTTCGCCAAGCTGAACGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103238.2
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS GCA 72 bp GCAAACTTTCGTGGCAGTCCCCTAGGTGGGCTGTGTTaGCGTACTCCGTGTCCTGCTCATATCCTCCAGGGA +
Preference number: 6 (lower is better)
Translates to: ANFRGSPLGGLC*RTPCPAHILQG
Trigger: TCCCTGGAGGATATGAGCAGGACACGGAGTACGGCAACACAGCCCACCTAGGGGACTGCCACGAAAGTTTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000103239.10
ENSMUST00000103240.9
CDS CCA 72 bp TCGGCAATGGGTGGGACGGCAGAGTCCATCAGCGGGTaGGACTTGATGAAAGCCAGGGTGTCATCTGGAAAG +
Preference number: 6 (lower is better)
Translates to: SAMGGTAESISG*DLMKARVSSGK
Trigger: CTTTCCAGATGACACCCTGGCTTTCATCAAGTCCCACCCGCTGATGGACTCTGCCGTCCCACCCATTGCCGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103238.2
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS CCA 72 bp TGTCAAAGAGGCCGTTCAGCTTGGCGAAGCTTCCGCTaGAGTCTGTGCACGACTGGGCGGATTCTGCGTCTT +
Preference number: 6 (lower is better)
Translates to: CQRGRSAWRSFR*SLCTTGRILRL
Trigger: AAGACGCAGAATCCGCCCAGTCGTGCACAGACTCCAGCGGAAGCTTCGCCAAGCTGAACGGCCTCTTTGACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103238.2
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS CCA 72 bp CGGTGTCCCCTGAATATAGTCCACCTTCGCCCCTGTTaGGGTGGGCATATAGCCTCCACGGTTCATACTCGG +
Preference number: 6 (lower is better)
Translates to: RCPLNIVHLRPC*GGHIASTVHTR
Trigger: CCGAGTATGAACCGTGGAGGCTATATGCCCACCCCAACAGGGGCGAAGGTGGACTATATTCAGGGGACACCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103238.2
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS CCA 72 bp TCCTCTTTAGTCCCGTCCTGGGGAGGGTGCCATTACTaGTATAGCTGCTCTGTCTGGAGAGGGAGGGCTGCA +
Preference number: 6 (lower is better)
Translates to: SSLVPSWGGCHY*YSCSVWRGRAA
Trigger: TGCAGCCCTCCCTCTCCAGACAGAGCAGCTATACCAGTAATGGCACCCTCCCCAGGACGGGACTAAAGAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103238.2
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS CAA 72 bp TATTCCTTGACGGGGCTGTCAAAGAGGCCGTTCAGCTaGGCGAAGCTTCCGCTGGAGTCTGTGCACGACTGG +
Preference number: 6 (lower is better)
Translates to: YSLTGLSKRPFS*AKLPLESVHDW
Trigger: CCAGTCGTGCACAGACTCCAGCGGAAGCTTCGCCAAGCTGAACGGCCTCTTTGACAGCCCCGTCAAGGAATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103238.2
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS CAA 90 bp TCATCGGCAATGGGTGGGACGGCAGAGTCCATCAGCGGGTGGGACTaGATGAAAGCCAGGGTGTCATCTGGAAAGTCGATGGAGGTCTTG +
Preference number: 6 (lower is better)
Translates to: SSAMGGTAESISGWD*MKARVSSGKSMEVL
Trigger: CAAGACCTCCATCGACTTTCCAGATGACACCCTGGCTTTCATCAAGTCCCACCCGCTGATGGACTCTGCCGTCCCACCCATTGCCGATGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103238.2
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS CAA 90 bp GAGGCTGGCCTCTGTGGTCCACGGCCATGGACTTTGTATCCGTGTTaGGTGGCAGTTCCTTCCGACTGGTCAGCAGGTTGCTGTAGAGTT +
Preference number: 6 (lower is better)
Translates to: EAGLCGPRPWTLYPC*VAVPSDWSAGCCRV
Trigger: AACTCTACAGCAACCTGCTGACCAGTCGGAAGGAACTGCCACCAAACACGGATACAAAGTCCATGGCCGTGGACCACAGAGGCCAGCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103238.2
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS CAA 90 bp GTTGAAGGAGGCAAACTTTCGTGGCAGTCCCCTAGGTGGGCTGTGTaGCCGTACTCCGTGTCCTGCTCATATCCTCCAGGGCTGTGGTTA +
Preference number: 6 (lower is better)
Translates to: VEGGKLSWQSPRWAV*PYSVSCSYPPGLWL
Trigger: TAACCACAGCCCTGGAGGATATGAGCAGGACACGGAGTACGGCAACACAGCCCACCTAGGGGACTGCCACGAAAGTTTGCCTCCTTCAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000078621.12
CDS GCA 72 bp AGGATGGTGTCCTCTTTAGTCCCGTCCTGGGGAGGGTaGCATTACTGGTATAGCTGCTCTGTCTGGAGAGGG +
Preference number: 6 (lower is better)
Translates to: RMVSSLVPSWGG*HYWYSCSVWRG
Trigger: CCCTCTCCAGACAGAGCAGCTATACCAGTAATGGCACCCTCCCCAGGACGGGACTAAAGAGGACACCATCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103238.2
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS CCA 72 bp GATGAGGATACCTCCATGTCGTGGCAGTCCCCTAGGTaGGCTGTGTTGCCGTACTCCGTGTCCTGCTCATAT +
Preference number: 6 (lower is better)
Translates to: DEDTSMSWQSPR*AVLPYSVSCSY
Trigger: ATATGAGCAGGACACGGAGTACGGCAACACAGCCCACCTAGGGGACTGCCACGACATGGAGGTATCCTCATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000077847.12
ENSMUST00000103238.2
CDS CAA 72 bp ATGGGTGGGACGGCAGAGTCCATCAGCGGGTGGGACTaGATGAAAGCCAGGGTGTCATCTGGAAAGTCGATG +
Preference number: 6 (lower is better)
Translates to: MGGTAESISGWD*MKARVSSGKSM
Trigger: CATCGACTTTCCAGATGACACCCTGGCTTTCATCAAGTCCCACCCGCTGATGGACTCTGCCGTCCCACCCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103238.2
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS CAA 72 bp CTCTGTGGTCCACGGCCATGGACTTTGTATCCGTGTTaGGTGGCAGTTCCTTCCGACTGGTCAGCAGGTTGC +
Preference number: 6 (lower is better)
Translates to: LCGPRPWTLYPC*VAVPSDWSAGC
Trigger: GCAACCTGCTGACCAGTCGGAAGGAACTGCCACCAAACACGGATACAAAGTCCATGGCCGTGGACCACAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103238.2
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS TCA 72 bp GGAATCCACAGACCGCCGGTGCTCCCGCTTACTGGATaGCTTCGTAAGAGGGTGATCCATGCTCTGAAGCTT +
Preference number: 6 (lower is better)
Translates to: GIHRPPVLPLTG*LRKRVIHALKL
Trigger: AAGCTTCAGAGCATGGATCACCCTCTTACGAAGTCATCCAGTAAGCGGGAGCACCGGCGGTCTGTGGATTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103238.2
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS GCA 72 bp GGACCCGCTGTGAGCCACCCATGTCGTTTTTACAAATaGGAGCCACGCGGGAATACACAGCCTTGCCTAAGT +
Preference number: 6 (lower is better)
Translates to: GPAVSHPCRFYK*EPRGNTQPCLS
Trigger: ACTTAGGCAAGGCTGTGTATTCCCGCGTGGCTCGCATTTGTAAAAACGACATGGGTGGCTCACAGCGGGTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103238.2
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS GCA 72 bp GTCATCTGGAAAGTCGATGGAGGTCTTGTAAGCTTCTaGGAGGCCGTGTTTGGCACAACAGCCAGGCCTTGG +
Preference number: 6 (lower is better)
Translates to: VIWKVDGGLVSF*EAVFGTTARPW
Trigger: CCAAGGCCTGGCTGTTGTGCCAAACACGGCCTCGCAGAAGCTTACAAGACCTCCATCGACTTTCCAGATGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103238.2
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS CCA 72 bp GTGGTCCACGGCCATGGACTTTGTATCCGTGTTTGGTaGCAGTTCCTTCCGACTGGTCAGCAGGTTGCTGTA +
Preference number: 6 (lower is better)
Translates to: VVHGHGLCIRVW*QFLPTGQQVAV
Trigger: TACAGCAACCTGCTGACCAGTCGGAAGGAACTGCCACCAAACACGGATACAAAGTCCATGGCCGTGGACCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103238.2
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS CCA 72 bp TCTGTGGTCCACGGCCATGGACTTTGTATCCGTGTTTaGTGGCAGTTCCTTCCGACTGGTCAGCAGGTTGCT +
Preference number: 6 (lower is better)
Translates to: SVVHGHGLCIRV*WQFLPTGQQVA
Trigger: AGCAACCTGCTGACCAGTCGGAAGGAACTGCCACCAAACACGGATACAAAGTCCATGGCCGTGGACCACAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103238.2
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS CCA 72 bp TGTAGTCGTGAGTGGCGTTTGGAAGAACGATGGCACTaGGGATATGCCCGTGACTCAATGGGGAATGGGGTG +
Preference number: 6 (lower is better)
Translates to: CSREWRLEERWH*GYARDSMGNGV
Trigger: CACCCCATTCCCCATTGAGTCACGGGCATATCCCCAGTGCCATCGTTCTTCCAAACGCCACTCACGACTACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103238.2
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS CCA 72 bp GTTGAAGGAGGCAAACTTTCGTGGCAGTCCCCTAGGTaGGCTGTGTTGCCGTACTCCGTGTCCTGCTCATAT +
Preference number: 6 (lower is better)
Translates to: VEGGKLSWQSPR*AVLPYSVSCSY
Trigger: ATATGAGCAGGACACGGAGTACGGCAACACAGCCCACCTAGGGGACTGCCACGAAAGTTTGCCTCCTTCAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000078621.12
ENSMUST00000103239.10
ENSMUST00000103240.9
CDS CCA 72 bp CAGCGGGTGGGACTTGATGAAAGCCAGGGTGTCATCTaGAAAGTCGATGGAGGTCTTGTAAGCTTCTGCGAG +
Preference number: 6 (lower is better)
Translates to: QRVGLDESQGVI*KVDGGLVSFCE
Trigger: CTCGCAGAAGCTTACAAGACCTCCATCGACTTTCCAGATGACACCCTGGCTTTCATCAAGTCCCACCCGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103238.2
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS CCA 72 bp AGCTTGGCGAAGCTTCCGCTGGAGTCTGTGCACGACTaGGCGGATTCTGCGTCTTTATGGATCTTTCTGTTC +
Preference number: 6 (lower is better)
Translates to: SLAKLPLESVHD*ADSASLWIFLF
Trigger: GAACAGAAAGATCCATAAAGACGCAGAATCCGCCCAGTCGTGCACAGACTCCAGCGGAAGCTTCGCCAAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103238.2
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS CAA 90 bp GGGCATTCGAGTTGGAGAAGGATGTATTGTAGTCGTGAGTGGCGTTaGGAAGAACGATGGCACTGGGGATATGCCCGTGACTCAATGGGG +
Preference number: 6 (lower is better)
Translates to: GHSSWRRMYCSREWR*EERWHWGYARDSMG
Trigger: CCCCATTGAGTCACGGGCATATCCCCAGTGCCATCGTTCTTCCAAACGCCACTCACGACTACAATACATCCTTCTCCAACTCGAATGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103238.2
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS GCA 72 bp GCTTCCGCTGGAGTCTGTGCACGACTGGGCGGATTCTaGGTCTTTATGGATCTTTCTGTTCTTCCGAACGAA +
Preference number: 6 (lower is better)
Translates to: ASAGVCARLGGF*VFMDLSVLPNE
Trigger: TTCGTTCGGAAGAACAGAAAGATCCATAAAGACGCAGAATCCGCCCAGTCGTGCACAGACTCCAGCGGAAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103238.2
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS CCA 72 bp CAGAATAGAGTTTTCCATCAGCAAAGAGGGCGACATTaGTTTGTCGGGCATCAAACGGGCATCGTGCCAGGC +
Preference number: 6 (lower is better)
Translates to: QNRVFHQQRGRH*FVGHQTGIVPG
Trigger: GCCTGGCACGATGCCCGTTTGATGCCCGACAAACCAATGTCGCCCTCTTTGCTGATGGAAAACTCTATTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103238.2
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS CCA 72 bp CGATGGAGGTCTTGTAAGCTTCTGCGAGGCCGTGTTTaGCACAACAGCCAGGCCTTGGTTTTGGTACTTTGT +
Preference number: 6 (lower is better)
Translates to: RWRSCKLLRGRV*HNSQALVLVLC
Trigger: ACAAAGTACCAAAACCAAGGCCTGGCTGTTGTGCCAAACACGGCCTCGCAGAAGCTTACAAGACCTCCATCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103238.2
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS CCA 72 bp CAGGTTTTAAGGATGGTGTCCTCTTTAGTCCCGTCCTaGGGAGGGTGCCATTACTGGTATAGCTGCTCTGTC +
Preference number: 6 (lower is better)
Translates to: QVLRMVSSLVPS*GGCHYWYSCSV
Trigger: GACAGAGCAGCTATACCAGTAATGGCACCCTCCCCAGGACGGGACTAAAGAGGACACCATCCTTAAAACCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103238.2
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS CAA 72 bp ATAGAGTTTTCCATCAGCAAAGAGGGCGACATTGGTTaGTCGGGCATCAAACGGGCATCGTGCCAGGCCACT +
Preference number: 6 (lower is better)
Translates to: IEFSISKEGDIG*SGIKRASCQAT
Trigger: AGTGGCCTGGCACGATGCCCGTTTGATGCCCGACAAACCAATGTCGCCCTCTTTGCTGATGGAAAACTCTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103238.2
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS TCA 72 bp AGAGTTTGGGAGAATCAATGTTCTGCTGGTATTCCTTaGCGGGGCTGTCAAAGAGGCCGTTCAGCTTGGCGA +
Preference number: 6 (lower is better)
Translates to: RVWENQCSAGIP*RGCQRGRSAWR
Trigger: TCGCCAAGCTGAACGGCCTCTTTGACAGCCCCGTCAAGGAATACCAGCAGAACATTGATTCTCCCAAACTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103238.2
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS GCA 72 bp GGCTTAACCAACCACAGTACGGGTCACGTGATGCAATaGAAGACTTTTTACACGATCCGTAGCGCTCACAGC +
Preference number: 6 (lower is better)
Translates to: GLTNHSTGHVMQ*KTFYTIRSAHS
Trigger: GCTGTGAGCGCTACGGATCGTGTAAAAAGTCTTGCATTGCATCACGTGACCCGTACTGTGGTTGGTTAAGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103238.2
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS CCA 72 bp CCGTACTCCGTGTCCTGCTCATATCCTCCAGGGCTGTaGTTATGGAAAGCAAAGAAGTCTTCGGTTAACAGC +
Preference number: 6 (lower is better)
Translates to: PYSVSCSYPPGL*LWKAKKSSVNS
Trigger: GCTGTTAACCGAAGACTTCTTTGCTTTCCATAACCACAGCCCTGGAGGATATGAGCAGGACACGGAGTACGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000051419.15
ENSMUST00000078621.12
CDS CCA 72 bp GAGTCTGTGCACGACTGGGCGGATTCTGCGTCTTTATaGATCTTTCTGTTCTTCCGAACGAACATGTCACGG +
Preference number: 6 (lower is better)
Translates to: ESVHDWADSASL*IFLFFRTNMSR
Trigger: CCGTGACATGTTCGTTCGGAAGAACAGAAAGATCCATAAAGACGCAGAATCCGCCCAGTCGTGCACAGACTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103238.2
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS CCA 72 bp GTTGGAGAAGGATGTATTGTAGTCGTGAGTGGCGTTTaGAAGAACGATGGCACTGGGGATATGCCCGTGACT +
Preference number: 6 (lower is better)
Translates to: VGEGCIVVVSGV*KNDGTGDMPVT
Trigger: AGTCACGGGCATATCCCCAGTGCCATCGTTCTTCCAAACGCCACTCACGACTACAATACATCCTTCTCCAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103238.2
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS CCA 72 bp GTCTTTCCAGAGAAGTCATTGGCACCCCAGGAGTGGTaGGGACATCTACTCTCTTGGTTGGACTATTTCTGG +
Preference number: 6 (lower is better)
Translates to: VFPEKSLAPQEW*GHLLSWLDYFW
Trigger: CCAGAAATAGTCCAACCAAGAGAGTAGATGTCCCCACCACTCCTGGGGTGCCAATGACTTCTCTGGAAAGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103238.2
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS CAA 72 bp TGTTTGGCACAACAGCCAGGCCTTGGTTTTGGTACTTaGTCTTCGGGAACTGCTGTCCAAACAGAGTCTGGG +
Preference number: 6 (lower is better)
Translates to: CLAQQPGLGFGT*SSGTAVQTESG
Trigger: CCCAGACTCTGTTTGGACAGCAGTTCCCGAAGACAAAGTACCAAAACCAAGGCCTGGCTGTTGTGCCAAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103238.2
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS CAA 72 bp AGTTGGAGAAGGATGTATTGTAGTCGTGAGTGGCGTTaGGAAGAACGATGGCACTGGGGATATGCCCGTGAC +
Preference number: 6 (lower is better)
Translates to: SWRRMYCSREWR*EERWHWGYARD
Trigger: GTCACGGGCATATCCCCAGTGCCATCGTTCTTCCAAACGCCACTCACGACTACAATACATCCTTCTCCAACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103238.2
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS CAA 90 bp TGTGGCAGAATAGAGTTTTCCATCAGCAAAGAGGGCGACATTGGTTaGTCGGGCATCAAACGGGCATCGTGCCAGGCCACTAATTTCTTC +
Preference number: 6 (lower is better)
Translates to: CGRIEFSISKEGDIG*SGIKRASCQATNFF
Trigger: GAAGAAATTAGTGGCCTGGCACGATGCCCGTTTGATGCCCGACAAACCAATGTCGCCCTCTTTGCTGATGGAAAACTCTATTCTGCCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103238.2
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS TCA 72 bp ACCACGCAGCTAGAGAAGGCCACGTATAAAGCATGGTaGTCCTTGTCCAGCTGTAATGAGACCACCTTTCTG +
Preference number: 6 (lower is better)
Translates to: TTQLEKATYKAW*SLSSCNETTFL
Trigger: CAGAAAGGTGGTCTCATTACAGCTGGACAAGGATCACCATGCTTTATACGTGGCCTTCTCTAGCTGCGTGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103238.2
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS TCA 72 bp AACACGCAGGTGATGAGGACATTCATGTGGACCATCTaGTTGGATTCTCCAGACTGGACTTCCCACCGTACA +
Preference number: 6 (lower is better)
Translates to: NTQVMRTFMWTI*LDSPDWTSHRT
Trigger: TGTACGGTGGGAAGTCCAGTCTGGAGAATCCAATCAGATGGTCCACATGAATGTCCTCATCACCTGCGTGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103238.2
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS GCA 72 bp TGTTTGGTGGCAGTTCCTTCCGACTGGTCAGCAGGTTaGTGTAGAGTTTGGGAGAATCAATGTTCTGCTGGT +
Preference number: 6 (lower is better)
Translates to: CLVAVPSDWSAG*CRVWENQCSAG
Trigger: ACCAGCAGAACATTGATTCTCCCAAACTCTACAGCAACCTGCTGACCAGTCGGAAGGAACTGCCACCAAACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103238.2
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS CCA 72 bp CCACCTTTCTGTCCTCCTCACTCTCGGCGCTGCACTTaGCTGGGTTATAAGCTTCAATCTCTTCGAGTAATA +
Preference number: 6 (lower is better)
Translates to: PPFCPPHSRRCT*LGYKLQSLRVI
Trigger: TATTACTCGAAGAGATTGAAGCTTATAACCCAGCCAAGTGCAGCGCCGAGAGTGAGGAGGACAGAAAGGTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103238.2
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS CCA 72 bp ATGTATTGTAGTCGTGAGTGGCGTTTGGAAGAACGATaGCACTGGGGATATGCCCGTGACTCAATGGGGAAT +
Preference number: 6 (lower is better)
Translates to: MYCSREWRLEER*HWGYARDSMGN
Trigger: ATTCCCCATTGAGTCACGGGCATATCCCCAGTGCCATCGTTCTTCCAAACGCCACTCACGACTACAATACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103238.2
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS CCA 72 bp CATTCGAGTTGGAGAAGGATGTATTGTAGTCGTGAGTaGCGTTTGGAAGAACGATGGCACTGGGGATATGCC +
Preference number: 6 (lower is better)
Translates to: HSSWRRMYCSRE*RLEERWHWGYA
Trigger: GGCATATCCCCAGTGCCATCGTTCTTCCAAACGCCACTCACGACTACAATACATCCTTCTCCAACTCGAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103238.2
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS CAA 72 bp TCTCGATCCTGCTGTCTGGACCTCCACGTCAGCTTCTaGCTTGGTATCACCTCTGTTTGGGGGATTTCATTT +
Preference number: 6 (lower is better)
Translates to: SRSCCLDLHVSF*LGITSVWGISF
Trigger: AAATGAAATCCCCCAAACAGAGGTGATACCAAGCAAGAAGCTGACGTGGAGGTCCAGACAGCAGGATCGAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103238.2
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS CAA 72 bp GTACGTGTACTTGTTCAGTGGTCTGACAGATGTGGTTaGCGGAACAAAGGAAGGCTTTGGTGGCACATCAGG +
Preference number: 6 (lower is better)
Translates to: VRVLVQWSDRCG*RNKGRLWWHIR
Trigger: CCTGATGTGCCACCAAAGCCTTCCTTTGTTCCGCAAACCACATCTGTCAGACCACTGAACAAGTACACGTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103238.2
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS CAA 90 bp GCTGTCCAAACAGAGTCTGGGGTTTTCTGCTCTTTGAACCGCCCTTaGAACACTTTCTCAATGTCGTCCATGCTAAAGGCACAGACTGCA +
Preference number: 6 (lower is better)
Translates to: AVQTESGVFCSLNRP*NTFSMSSMLKAQTA
Trigger: TGCAGTCTGTGCCTTTAGCATGGACGACATTGAGAAAGTGTTCAAAGGGCGGTTCAAAGAGCAGAAAACCCCAGACTCTGTTTGGACAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103238.2
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS TCA 72 bp AACAAAGATGACTGTGTAGTTTTGGTATGGCCCTGCTaGACGGTCCACTTCGATGGCTGTCAACCTGTACCT +
Preference number: 6 (lower is better)
Translates to: NKDDCVVLVWPC*TVHFDGCQPVP
Trigger: AGGTACAGGTTGACAGCCATCGAAGTGGACCGTTCAGCAGGGCCATACCAAAACTACACAGTCATCTTTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103238.2
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS GCA 72 bp TCGGGAACTGCTGTCCAAACAGAGTCTGGGGTTTTCTaGTCTTTGAACCGCCCTTTGAACACTTTCTCAATG +
Preference number: 6 (lower is better)
Translates to: SGTAVQTESGVF*SLNRPLNTFSM
Trigger: CATTGAGAAAGTGTTCAAAGGGCGGTTCAAAGAGCAGAAAACCCCAGACTCTGTTTGGACAGCAGTTCCCGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103238.2
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS CCA 72 bp TACTTTGTCTTCGGGAACTGCTGTCCAAACAGAGTCTaGGGTTTTCTGCTCTTTGAACCGCCCTTTGAACAC +
Preference number: 6 (lower is better)
Translates to: YFVFGNCCPNRV*GFLLFEPPFEH
Trigger: GTGTTCAAAGGGCGGTTCAAAGAGCAGAAAACCCCAGACTCTGTTTGGACAGCAGTTCCCGAAGACAAAGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103238.2
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS CCA 72 bp ACTTTGTATCCGTGTTTGGTGGCAGTTCCTTCCGACTaGTCAGCAGGTTGCTGTAGAGTTTGGGAGAATCAA +
Preference number: 6 (lower is better)
Translates to: TLYPCLVAVPSD*SAGCCRVWENQ
Trigger: TTGATTCTCCCAAACTCTACAGCAACCTGCTGACCAGTCGGAAGGAACTGCCACCAAACACGGATACAAAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103238.2
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS CCA 72 bp TTTGTCTTTCCAGAGAAGTCATTGGCACCCCAGGAGTaGTGGGGACATCTACTCTCTTGGTTGGACTATTTC +
Preference number: 6 (lower is better)
Translates to: FVFPEKSLAPQE*WGHLLSWLDYF
Trigger: GAAATAGTCCAACCAAGAGAGTAGATGTCCCCACCACTCCTGGGGTGCCAATGACTTCTCTGGAAAGACAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103238.2
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS CAA 72 bp GATCCTGCTGTCTGGACCTCCACGTCAGCTTCTTGCTaGGTATCACCTCTGTTTGGGGGATTTCATTTAAGT +
Preference number: 6 (lower is better)
Translates to: DPAVWTSTSASC*VSPLFGGFHLS
Trigger: ACTTAAATGAAATCCCCCAAACAGAGGTGATACCAAGCAAGAAGCTGACGTGGAGGTCCAGACAGCAGGATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103238.2
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS CAA 72 bp GGTGAAGACCCCAACCACAGTGGGGATGCCATTGATTaGGATTATGTCTGTTATAGACTGCAGGACGTCGAA +
Preference number: 6 (lower is better)
Translates to: GEDPNHSGDAID*DYVCYRLQDVE
Trigger: TTCGACGTCCTGCAGTCTATAACAGACATAATCCAAATCAATGGCATCCCCACTGTGGTTGGGGTCTTCACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103238.2
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS CAA 72 bp TGTGTGGTGAAGACCCCAACCACAGTGGGGATGCCATaGATTTGGATTATGTCTGTTATAGACTGCAGGACG +
Preference number: 6 (lower is better)
Translates to: CVVKTPTTVGMP*IWIMSVIDCRT
Trigger: CGTCCTGCAGTCTATAACAGACATAATCCAAATCAATGGCATCCCCACTGTGGTTGGGGTCTTCACCACACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103238.2
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS CAA 72 bp ACTGCTGTCCAAACAGAGTCTGGGGTTTTCTGCTCTTaGAACCGCCCTTTGAACACTTTCTCAATGTCGTCC +
Preference number: 6 (lower is better)
Translates to: TAVQTESGVFCS*NRPLNTFSMSS
Trigger: GGACGACATTGAGAAAGTGTTCAAAGGGCGGTTCAAAGAGCAGAAAACCCCAGACTCTGTTTGGACAGCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103238.2
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS CAA 90 bp TCTTCGGGAACTGCTGTCCAAACAGAGTCTGGGGTTTTCTGCTCTTaGAACCGCCCTTTGAACACTTTCTCAATGTCGTCCATGCTAAAG +
Preference number: 6 (lower is better)
Translates to: SSGTAVQTESGVFCS*NRPLNTFSMSSMLK
Trigger: CTTTAGCATGGACGACATTGAGAAAGTGTTCAAAGGGCGGTTCAAAGAGCAGAAAACCCCAGACTCTGTTTGGACAGCAGTTCCCGAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103238.2
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS CAA 90 bp GAGCTGTGTGGTGAAGACCCCAACCACAGTGGGGATGCCATTGATTaGGATTATGTCTGTTATAGACTGCAGGACGTCGAAGTAGAAAAA +
Preference number: 6 (lower is better)
Translates to: ELCGEDPNHSGDAID*DYVCYRLQDVEVEK
Trigger: TTTTTCTACTTCGACGTCCTGCAGTCTATAACAGACATAATCCAAATCAATGGCATCCCCACTGTGGTTGGGGTCTTCACCACACAGCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103238.2
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS TCA 72 bp TACTGTTTGGGTCATTTAGATGCTTCAGGAGATCATTaGGAGTATTCCTGGAATCCACAGACCGCCGGTGCT +
Preference number: 6 (lower is better)
Translates to: YCLGHLDASGDH*EYSWNPQTAGA
Trigger: AGCACCGGCGGTCTGTGGATTCCAGGAATACTCTCAATGATCTCCTGAAGCATCTAAATGACCCAAACAGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103238.2
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS TCA 72 bp AATTTCTGGGCTACTTGCCACAGTGGTAACAGAAGATaGGGATACCTCCATGTCAGATGTTGGACCGCCAAA +
Preference number: 6 (lower is better)
Translates to: NFWATCHSGNRR*GYLHVRCWTAK
Trigger: TTTGGCGGTCCAACATCTGACATGGAGGTATCCTCATCTTCTGTTACCACTGTGGCAAGTAGCCCAGAAATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000103239.10
ENSMUST00000103240.9
CDS GCA 72 bp TTATGCTTGCCTTTCATAGCACAATTTTCTCGATCCTaGTGTCTGGACCTCCACGTCAGCTTCTTGCTTGGT +
Preference number: 6 (lower is better)
Translates to: LCLPFIAQFSRS*CLDLHVSFLLG
Trigger: ACCAAGCAAGAAGCTGACGTGGAGGTCCAGACAGCAGGATCGAGAAAATTGTGCTATGAAAGGCAAGCATAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103238.2
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS CCA 72 bp TCTGAAGCTTCTTTTCGGCTTTGTGGGCATTCGAGTTaGAGAAGGATGTATTGTAGTCGTGAGTGGCGTTTG +
Preference number: 6 (lower is better)
Translates to: SEASFRLCGHSS*RRMYCSREWRL
Trigger: CAAACGCCACTCACGACTACAATACATCCTTCTCCAACTCGAATGCCCACAAAGCCGAAAAGAAGCTTCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103238.2
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS CAA 72 bp TTACTGTTTGGGTCATTTAGATGCTTCAGGAGATCATaGAGAGTATTCCTGGAATCCACAGACCGCCGGTGC +
Preference number: 6 (lower is better)
Translates to: LLFGSFRCFRRS*RVFLESTDRRC
Trigger: GCACCGGCGGTCTGTGGATTCCAGGAATACTCTCAATGATCTCCTGAAGCATCTAAATGACCCAAACAGTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103238.2
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS CCA 72 bp TTTGATGAGCCATATGGATCTCTCCCAGGATGGCTTTaGGGTTACTGTTTGGGTCATTTAGATGCTTCAGGA +
Preference number: 6 (lower is better)
Translates to: FDEPYGSLPGWL*GYCLGHLDASG
Trigger: TCCTGAAGCATCTAAATGACCCAAACAGTAACCCCAAAGCCATCCTGGGAGAGATCCATATGGCTCATCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103238.2
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS TCA 72 bp AGACTGGACTTCCCACCGTACACCCTTTGGGATACCTaGTATAGTATCAGTAAAATCAGAAGTATTTGGGTC +
Preference number: 6 (lower is better)
Translates to: RLDFPPYTLWDT*YSISKIRSIWV
Trigger: GACCCAAATACTTCTGATTTTACTGATACTATATCAGGTATCCCAAAGGGTGTACGGTGGGAAGTCCAGTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000077847.12
ENSMUST00000103238.2
ENSMUST00000103239.10
CDS TCA 72 bp ATAGTATCAGTAAAATCAGAAGTATTTGGGTCATCTTaGACTACAAATTTCCGGGAGCTCGTCAGTTTAGGT +
Preference number: 6 (lower is better)
Translates to: IVSVKSEVFGSS*TTNFRELVSLG
Trigger: ACCTAAACTGACGAGCTCCCGGAAATTTGTAGTTCAAGATGACCCAAATACTTCTGATTTTACTGATACTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000077847.12
ENSMUST00000103238.2
ENSMUST00000103239.10
ENSMUST00000103240.9
CDS CCA 72 bp TCATCATTTCTTGGGACAAAGACTTTGATGAAGTTGTaGCATTCATCTTTATGCTTGCCTTTCATAGCACAA +
Preference number: 6 (lower is better)
Translates to: SSFLGTKTLMKL*HSSLCLPFIAQ
Trigger: TTGTGCTATGAAAGGCAAGCATAAAGATGAATGCCACAACTTCATCAAAGTCTTTGTCCCAAGAAATGATGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000051419.15
ENSMUST00000076335.12
ENSMUST00000077847.12
ENSMUST00000078621.12
ENSMUST00000103238.2
ENSMUST00000103239.10
ENSMUST00000103240.9
ENSMUST00000103241.8
CDS CAA 72 bp TATAGTATCAGTAAAATCAGAAGTATTTGGGTCATCTaGAACTACAAATTTCCGGGAGCTCGTCAGTTTAGG +
Preference number: 6 (lower is better)
Translates to: YSISKIRSIWVI*NYKFPGARQFR
Trigger: CCTAAACTGACGAGCTCCCGGAAATTTGTAGTTCAAGATGACCCAAATACTTCTGATTTTACTGATACTATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000077847.12
ENSMUST00000103238.2
ENSMUST00000103239.10
ENSMUST00000103240.9