Pregenerated sensors for SEMA6C (Mus musculus)
Ensembl gene IDs: ENSMUSG00000038777Ensembl transcript IDs: ENSMUST00000090821.10, ENSMUST00000090823.8, ENSMUST00000107217.6, ENSMUST00000131620.8, ENSMUST00000142449.9, ENSMUST00000168321.8, ENSMUST00000202315.3, ENSMUST00000204709.3
Found 429 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GCGGTGGCCTCACCAGCACTCGCGGTGCGGGCCCGCCCGCCCCGCTaGAGCCCCGTGGTGGGCGGCCTGGGCCCTCCGAGGCGTTGTTCC | + |
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Preference number: 1 (lower is better) Translates to: AVASPALAVRARPPR*SPVVGGLGPPRRCS Trigger: GGAACAACGCCTCGGAGGGCCCAGGCCGCCCACCACGGGGCTGCAGCGGGGCGGGCGGGCCCGCACCGCGAGTGCTGGTGAGGCCACCGC 80% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000142449.9 ENSMUST00000204709.3 |
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| 3UTR TCA 90 bp | CCACGAACAGCGAGGCGCCGGGCTCCGAGGCGGGCGGCCGGGAGGTaGACGGGGCGGAGGCGAGAGGTTCGCTACCCTTCCTGGGCGGCT | + |
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Preference number: 1 (lower is better) Translates to: PRTARRRAPRRAAGR*TGRRREVRYPSWAA Trigger: AGCCGCCCAGGAAGGGTAGCGAACCTCTCGCCTCCGCCCCGTTCACCTCCCGGCCGCCCGCCTCGGAGCCCGGCGCCTCGCTGTTCGTGG 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000142449.9 ENSMUST00000204709.3 |
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| 3UTR CCA 90 bp | CAGCACTCGCGGTGCGGGCCCGCCCGCCCCGCTGCAGCCCCGTGGTaGGCGGCCTGGGCCCTCCGAGGCGTTGTTCCCATTCTGGTTCCA | + |
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Preference number: 1 (lower is better) Translates to: QHSRCGPARPAAAPW*AAWALRGVVPILVP Trigger: TGGAACCAGAATGGGAACAACGCCTCGGAGGGCCCAGGCCGCCCACCACGGGGCTGCAGCGGGGCGGGCGGGCCCGCACCGCGAGTGCTG 76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000142449.9 ENSMUST00000204709.3 |
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| 3UTR CCA 90 bp | CACCAGCACTCGCGGTGCGGGCCCGCCCGCCCCGCTGCAGCCCCGTaGTGGGCGGCCTGGGCCCTCCGAGGCGTTGTTCCCATTCTGGTT | + |
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Preference number: 1 (lower is better) Translates to: HQHSRCGPARPAAAP*WAAWALRGVVPILV Trigger: AACCAGAATGGGAACAACGCCTCGGAGGGCCCAGGCCGCCCACCACGGGGCTGCAGCGGGGCGGGCGGGCCCGCACCGCGAGTGCTGGTG 76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000142449.9 ENSMUST00000204709.3 |
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| 3UTR CCA 90 bp | AGGCACGGAGGTGCTTCACGGGCAGCTCGGGCGTCGTCTCCGGCGTaGGTAGGCAGGCCAGCTCCGGTGGGGATCCGCCGTCGGGCGGAG | + |
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Preference number: 1 (lower is better) Translates to: RHGGASRAARASSPA*VGRPAPVGIRRRAE Trigger: CTCCGCCCGACGGCGGATCCCCACCGGAGCTGGCCTGCCTACCCACGCCGGAGACGACGCCCGAGCTGCCCGTGAAGCACCTCCGTGCCT 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000142449.9 ENSMUST00000204709.3 |
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| 3UTR CCA 90 bp | TGGGCGGCTGAGGGCCGTGCAGGTAGCGCAGCAGTTCCTCCAGCGTaGTCACCTCTACCGCCTGCCCGGGGCAGCCAGGGGGCGGTGGCC | + |
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Preference number: 1 (lower is better) Translates to: WAAEGRAGSAAVPPA*SPLPPARGSQGAVA Trigger: GGCCACCGCCCCCTGGCTGCCCCGGGCAGGCGGTAGAGGTGACCACGCTGGAGGAACTGCTGCGCTACCTGCACGGCCCTCAGCCGCCCA 74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000142449.9 ENSMUST00000204709.3 |
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| 3UTR TCA 90 bp | CTCCAGCGCCTCGACGGGCGGGCGCGAGCAGCTTCCGTCAGAAGTTaGAATGACCACCGTGCGGGGCGGGCTGCGGCGGGGAGGCGAGGG | + |
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Preference number: 1 (lower is better) Translates to: LQRLDGRARAASVRS*NDHRAGRAAAGRRG Trigger: CCCTCGCCTCCCCGCCGCAGCCCGCCCCGCACGGTGGTCATTTCAACTTCTGACGGAAGCTGCTCGCGCCCGCCCGTCGAGGCGCTGGAG 73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000142449.9 ENSMUST00000204709.3 |
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| 3UTR CCA 90 bp | GACAGCGGAGACTTCACGTCCACCCTCTTCAGGGAGCGGCCGCGATaGCCTTCGGGCCGGCCCAGGTACAGGAGGTGCCTCCCGGGCCCC | + |
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Preference number: 1 (lower is better) Translates to: DSGDFTSTLFRERPR*PSGRPRYRRCLPGP Trigger: GGGGCCCGGGAGGCACCTCCTGTACCTGGGCCGGCCCGAAGGCCATCGCGGCCGCTCCCTGAAGAGGGTGGACGTGAAGTCTCCGCTGTC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000142449.9 ENSMUST00000204709.3 |
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| 3UTR GCA 90 bp | GTCGGGCGGAGGCAGGAAGGTAGTGTAGAGCTGGGGCGTTTGCGCTaGATCTCCATCCTTGGGCGGAGGCGGGGGCTCAGGACCGCCACC | + |
|
Preference number: 1 (lower is better) Translates to: VGRRQEGSVELGRLR*ISILGRRRGLRTAT Trigger: GGTGGCGGTCCTGAGCCCCCGCCTCCGCCCAAGGATGGAGATGCAGCGCAAACGCCCCAGCTCTACACTACCTTCCTGCCTCCGCCCGAC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000142449.9 ENSMUST00000204709.3 |
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| 3UTR GCA 90 bp | TTCCCATTCTGGTTCCATTCCCAGGGGCCCCCGGAGGCACGGAGGTaGTTCACGGGCAGCTCGGGCGTCGTCTCCGGCGTGGGTAGGCAG | + |
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Preference number: 1 (lower is better) Translates to: FPFWFHSQGPPEARR*FTGSSGVVSGVGRQ Trigger: CTGCCTACCCACGCCGGAGACGACGCCCGAGCTGCCCGTGAAGCACCTCCGTGCCTCCGGGGGCCCCTGGGAATGGAACCAGAATGGGAA 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000142449.9 ENSMUST00000204709.3 |
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| 3UTR TCA 90 bp | GCTACCTGGGTCAGCAGGGCCCTGCTAGTCAGAGTGAGGAGCGGTTaGTGGGTGGCGGGTGGCACAGCAGGATCCAGCAGCGGGTGTGCC | + |
|
Preference number: 1 (lower is better) Translates to: ATWVSRALLVRVRSG*WVAGGTAGSSSGCA Trigger: GGCACACCCGCTGCTGGATCCTGCTGTGCCACCCGCCACCCATCAACCGCTCCTCACTCTGACTAGCAGGGCCCTGCTGACCCAGGTAGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000142449.9 ENSMUST00000204709.3 |
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| 3UTR TCA 90 bp | AGGCCACAAAAAGCCTGTGACCCTCAGTGTCCAGCTCCAGCCCTATaGTCCGCCGCGCAGCTCGGGGTGACCGCTTCCCACTGCACCGGG | + |
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Preference number: 1 (lower is better) Translates to: RPQKACDPQCPAPAL*SAAQLGVTASHCTG Trigger: CCCGGTGCAGTGGGAAGCGGTCACCCCGAGCTGCGCGGCGGATCATAGGGCTGGAGCTGGACACTGAGGGTCACAGGCTTTTTGTGGCCT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000142449.9 ENSMUST00000204709.3 |
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| 3UTR CCA 90 bp | GCACCGCGAGGAAAGTCAGGCAGCGGCTTGGGGACACGGCTGTATTaGGAAGCAGGGGGCTCCTACACAGTAGGAGGAGGCACGTCCCGG | + |
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Preference number: 1 (lower is better) Translates to: APRGKSGSGLGTRLY*EAGGSYTVGGGTSR Trigger: CCGGGACGTGCCTCCTCCTACTGTGTAGGAGCCCCCTGCTTCCCAATACAGCCGTGTCCCCAAGCCGCTGCCTGACTTTCCTCGCGGTGC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000090821.10 ENSMUST00000090823.8 ENSMUST00000107217.6 ENSMUST00000142449.9 ENSMUST00000168321.8 |
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| 3UTR TCA 90 bp | CGGGAGGCTGAGGCTGGGGAAAGGTCCCTGCGCACGCCCTGTGTGTaGGCTCCAAGAGTGGAAGACTGGGGCCCTTGTTGGGCATCACTG | + |
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Preference number: 1 (lower is better) Translates to: REAEAGERSLRTPCV*APRVEDWGPCWASL Trigger: CAGTGATGCCCAACAAGGGCCCCAGTCTTCCACTCTTGGAGCTCACACACAGGGCGTGCGCAGGGACCTTTCCCCAGCCTCAGCCTCCCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000142449.9 ENSMUST00000204709.3 |
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| 3UTR CCA 90 bp | CAGGGCCCTGCTAGTCAGAGTGAGGAGCGGTTGATGGGTGGCGGGTaGCACAGCAGGATCCAGCAGCGGGTGTGCCTTGATGAAGAGCAG | + |
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Preference number: 1 (lower is better) Translates to: QGPASQSEERLMGGG*HSRIQQRVCLDEEQ Trigger: CTGCTCTTCATCAAGGCACACCCGCTGCTGGATCCTGCTGTGCCACCCGCCACCCATCAACCGCTCCTCACTCTGACTAGCAGGGCCCTG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000142449.9 ENSMUST00000204709.3 |
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| 3UTR TCA 90 bp | AAAGTTCCCTCTCCCACCCCAGAGTGTAGGCCGTGGAAAGGTGCCTaGCCTCTATCCAGAAACGTGCTGAGCGCCTTCCCCGGCACCCCC | + |
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Preference number: 1 (lower is better) Translates to: KVPSPTPECRPWKGA*PLSRNVLSAFPGTP Trigger: GGGGGTGCCGGGGAAGGCGCTCAGCACGTTTCTGGATAGAGGTCAGGCACCTTTCCACGGCCTACACTCTGGGGTGGGAGAGGGAACTTT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000090821.10 ENSMUST00000090823.8 ENSMUST00000107217.6 ENSMUST00000142449.9 |
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| 3UTR CCA 90 bp | CTCCCGGTCGCTCCATCTTGGCAGTCACCGTGCTCTGTGGATTCCTaGTTCCCAGTCAGATCGACATCAGTCCCACCAGGTCCCCTGATA | + |
|
Preference number: 1 (lower is better) Translates to: LPVAPSWQSPCSVDS*FPVRSTSVPPGPLI Trigger: TATCAGGGGACCTGGTGGGACTGATGTCGATCTGACTGGGAACCAGGAATCCACAGAGCACGGTGACTGCCAAGATGGAGCGACCGGGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000142449.9 ENSMUST00000204709.3 |
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| 3UTR CCA 90 bp | CAGACTGACTCCCGGTCGCTCCATCTTGGCAGTCACCGTGCTCTGTaGATTCCTGGTTCCCAGTCAGATCGACATCAGTCCCACCAGGTC | + |
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Preference number: 1 (lower is better) Translates to: QTDSRSLHLGSHRAL*IPGSQSDRHQSHQV Trigger: GACCTGGTGGGACTGATGTCGATCTGACTGGGAACCAGGAATCCACAGAGCACGGTGACTGCCAAGATGGAGCGACCGGGAGTCAGTCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000142449.9 ENSMUST00000204709.3 |
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| 3UTR TCA 90 bp | AAGCCAGGCAGCTCCTCTGACATGCTCCATGCCGGGCACACCGGCTaGGAGAGAGGTAGACGATACATCCAGGAAAGGCCACAAAAAGCC | + |
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Preference number: 1 (lower is better) Translates to: KPGSSSDMLHAGHTG*ERGRRYIQERPQKA Trigger: GGCTTTTTGTGGCCTTTCCTGGATGTATCGTCTACCTCTCTCTCAGCCGGTGTGCCCGGCATGGAGCATGTCAGAGGAGCTGCCTGGCTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000142449.9 ENSMUST00000204709.3 |
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| 3UTR CCA 90 bp | TCCCCTGATACTCATGCAGCCTCTGGATCGATGCCATCCACAGTATaGGTCCAGAGAAGCCAGGCAGCTCCTCTGACATGCTCCATGCCG | + |
|
Preference number: 1 (lower is better) Translates to: SPDTHAASGSMPSTV*VQRSQAAPLTCSMP Trigger: CGGCATGGAGCATGTCAGAGGAGCTGCCTGGCTTCTCTGGACCCATACTGTGGATGGCATCGATCCAGAGGCTGCATGAGTATCAGGGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000142449.9 ENSMUST00000204709.3 |
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| 3UTR CCA 90 bp | ACTGTCCCATCGTTGGAGCCAAGAAACAGGACAGTAGTATTTCTGTaGGGACCAGCCATTCCGTCCACAGCTACCTGGGTCAGCAGGGCC | + |
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Preference number: 1 (lower is better) Translates to: TVPSLEPRNRTVVFL*GPAIPSTATWVSRA Trigger: GGCCCTGCTGACCCAGGTAGCTGTGGACGGAATGGCTGGTCCCCACAGAAATACTACTGTCCTGTTTCTTGGCTCCAACGATGGGACAGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000142449.9 ENSMUST00000204709.3 |
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| 3UTR TCA 90 bp | CCTCAGACACAGGAGTCCAGGCCCCATCCAGACTCCTCTGCTCCTTaGACTTGCCCTCAAAGCCACGTTCAATATCATCTAGGTAGAAGG | + |
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Preference number: 1 (lower is better) Translates to: PQTQESRPHPDSSAP*TCPQSHVQYHLGRR Trigger: CCTTCTACCTAGATGATATTGAACGTGGCTTTGAGGGCAAGTTCAAGGAGCAGAGGAGTCTGGATGGGGCCTGGACTCCTGTGTCTGAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000142449.9 ENSMUST00000204709.3 |
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| 3UTR CCA 90 bp | GTGTGGCTCTCGAAGCCACTTGGAGTCATACTTTGCAGAACGGAGTaGAGGCTGAGGTCCAAGACTTCTGTAAACTACAGCATCACTGGC | + |
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Preference number: 1 (lower is better) Translates to: VWLSKPLGVILCRTE*RLRSKTSVNYSITG Trigger: GCCAGTGATGCTGTAGTTTACAGAAGTCTTGGACCTCAGCCTCCACTCCGTTCTGCAAAGTATGACTCCAAGTGGCTTCGAGAGCCACAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000142449.9 ENSMUST00000204709.3 |
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| 3UTR CCA 90 bp | GACTTCTGTAAACTACAGCATCACTGGCCTGGAAATCTGCTGCTGTaGCTGAGTACAAACTGCCCTCTGCAAAGATGGCCACAGTGGACT | + |
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Preference number: 1 (lower is better) Translates to: DFCKLQHHWPGNLLL*LSTNCPLQRWPQWT Trigger: AGTCCACTGTGGCCATCTTTGCAGAGGGCAGTTTGTACTCAGCCACAGCAGCAGATTTCCAGGCCAGTGATGCTGTAGTTTACAGAAGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000142449.9 ENSMUST00000204709.3 |
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| 3UTR GCA 90 bp | CGCATAGACAAAGTGTGGCTCTCGAAGCCACTTGGAGTCATACTTTaGAGAACGGAGTGGAGGCTGAGGTCCAAGACTTCTGTAAACTAC | + |
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Preference number: 1 (lower is better) Translates to: RIDKVWLSKPLGVIL*RTEWRLRSKTSVNY Trigger: GTAGTTTACAGAAGTCTTGGACCTCAGCCTCCACTCCGTTCTGCAAAGTATGACTCCAAGTGGCTTCGAGAGCCACACTTTGTCTATGCG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000142449.9 ENSMUST00000204709.3 |
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| 3UTR-3UTR CCA 90 bp | ACGAACAGCGAGGCGCCGGGCTCCGAGGCGGGCGGCCGGGAGGTGAACGGGGCGGAAGGGAGCGGGGAGTaGGAGTCGGCCAGGTCCCCT | + |
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Preference number: 2 (lower is better) Translates to: TNSEAPGSEAGGREVNGAEGSGE*ESARSP Trigger: AGGGGACCTGGCCGACTCCCACTCCCCGCTCCCTTC...CGCCCCGTTCACCTCCCGGCCGCCCGCCTCGGAGCCCGGCGCCTCGCTGTTCGT 76% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000142449.9 ENSMUST00000204709.3 |
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| 3UTR-3UTR CCA 90 bp | GCCGGCCCGCCCGGGGCTCAGTCCGCGGGAGTCCGGAGCGGCGACTTAAGGCAGTACCCACTGCTCTCCTaGGCCCCGGCTCAGCCCACA | + |
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Preference number: 2 (lower is better) Translates to: AGPPGAQSAGVRSGDLRQYPLLS*APAQPT Trigger: TGTGGGCTGAGCCGGGGCCCAGGAGAGCAGTGGGTA...CTGCCTTAAGTCGCCGCTCCGGACTCCCGCGGACTGAGCCCCGGGCGGGCCGGC 73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000090821.10 ENSMUST00000090823.8 ENSMUST00000107217.6 ENSMUST00000142449.9 |
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| 3UTR-3UTR CCA 90 bp | AGCAGGGGGCTCCTACACAGTAGGAGGAGGCACGTCCCGGCCCCGGGAGGCCCGGAAGGGAGCGGGGAGTaGGAGTCGGCCAGGTCCCCT | + |
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Preference number: 2 (lower is better) Translates to: SRGLLHSRRRHVPAPGGPEGSGE*ESARSP Trigger: AGGGGACCTGGCCGACTCCCACTCCCCGCTCCCTTC...CGGGCCTCCCGGGGCCGGGACGTGCCTCCTCCTACTGTGTAGGAGCCCCCTGCT 72% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 6 transcripts: ENSMUST00000090821.10 ENSMUST00000090823.8 ENSMUST00000107217.6 ENSMUST00000142449.9 ENSMUST00000168321.8 ENSMUST00000204709.3 |
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| 3UTR-3UTR CCA 90 bp | GCACGTCCCGGCCCCGGGAGGCCCGAGGACTCTACACAGCGCGCGGCTCCAGCCCGACTTAAGGCAGCGTaGCTGGAAGGGAGCGGGGAG | + |
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Preference number: 2 (lower is better) Translates to: ARPGPGRPEDSTQRAAPARLKAA*LEGSGE Trigger: CTCCCCGCTCCCTTCCAGCCACGCTGCCTTAAGTCG...GGCTGGAGCCGCGCGCTGTGTAGAGTCCTCGGGCCTCCCGGGGCCGGGACGTGC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000090821.10 ENSMUST00000090823.8 ENSMUST00000107217.6 ENSMUST00000142449.9 ENSMUST00000168321.8 ENSMUST00000204709.3 |
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| 3UTR-3UTR CCA 90 bp | ACGAACAGCGAGGCGCCGGGCTCCGAGGCGGGCGGCCGGGAGGTGAACGGGGCGGGGACACGGCTGTATTaGGAAGCAGGGGGCTCCTAC | + |
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Preference number: 2 (lower is better) Translates to: TNSEAPGSEAGGREVNGAGTRLY*EAGGSY Trigger: GTAGGAGCCCCCTGCTTCCCAATACAGCCGTGTCCC...CGCCCCGTTCACCTCCCGGCCGCCCGCCTCGGAGCCCGGCGCCTCGCTGTTCGT 72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000142449.9 ENSMUST00000204709.3 |
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| 3UTR-3UTR TCA 90 bp | ACGAACAGCGAGGCGCCGGGCTCCGAGGCGGGCGGCCGGGAGGTGAACGGGGCGATCCAAGGCCCGAGGTaGGCCACCCATGTCACGTTT | + |
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Preference number: 2 (lower is better) Translates to: TNSEAPGSEAGGREVNGAIQGPR*ATHVTF Trigger: AAACGTGACATGGGTGGCTCACCTCGGGCCTTGGAT...CGCCCCGTTCACCTCCCGGCCGCCCGCCTCGGAGCCCGGCGCCTCGCTGTTCGT 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000142449.9 ENSMUST00000204709.3 |
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| 3UTR-3UTR CCA 90 bp | GTCCGCGGGAGTCCGGAGCGGCGACTTAAGGCAGCGTGGCTGGAAGGGAGCGGGGAAGGGAGCGGGGAGTaGGAGTCGGCCAGGTCCCCT | + |
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Preference number: 2 (lower is better) Translates to: VRGSPERRLKAAWLEGSGEGSGE*ESARSP Trigger: AGGGGACCTGGCCGACTCCCACTCCCCGCTCCCTTC...CCCGCTCCCTTCCAGCCACGCTGCCTTAAGTCGCCGCTCCGGACTCCCGCGGAC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 6 transcripts: ENSMUST00000090821.10 ENSMUST00000090823.8 ENSMUST00000107217.6 ENSMUST00000142449.9 ENSMUST00000168321.8 ENSMUST00000204709.3 |
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| 3UTR-3UTR CCA 90 bp | ATGATCCGCCGCGCAGCTCGGGGTGACCGCTTCCCACTGCACCGGGCATGGCTGGAAGGGAGCGGGGAGTaGGAGTCGGCCAGGTCCCCT | + |
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Preference number: 2 (lower is better) Translates to: MIRRAARGDRFPLHRAWLEGSGE*ESARSP Trigger: AGGGGACCTGGCCGACTCCCACTCCCCGCTCCCTTC...CAGCCATGCCCGGTGCAGTGGGAAGCGGTCACCCCGAGCTGCGCGGCGGATCAT 70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000142449.9 ENSMUST00000204709.3 |
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| 3UTR CAA 90 bp | TCCGCCGTCGGGCGGAGGCAGGAAGGTAGTGTAGAGCTGGGGCGTTaGCGCTGCATCTCCATCCTTGGGCGGAGGCGGGGGCTCAGGACC | + |
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Preference number: 2 (lower is better) Translates to: SAVGRRQEGSVELGR*RCISILGRRRGLRT Trigger: GGTCCTGAGCCCCCGCCTCCGCCCAAGGATGGAGATGCAGCGCAAACGCCCCAGCTCTACACTACCTTCCTGCCTCCGCCCGACGGCGGA 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000142449.9 ENSMUST00000204709.3 |
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| 3UTR-3UTR TCA 90 bp | ATGATCCGCCGCGCAGCTCGGGGTGACCGCTTCCCACTGCACCGGGCATGGCTGGGACCCTGGCCTGGGTaGGGGGACCTTGTCCTCAGA | + |
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Preference number: 2 (lower is better) Translates to: MIRRAARGDRFPLHRAWLGPWPG*GDLVLR Trigger: TCTGAGGACAAGGTCCCCTCACCCAGGCCAGGGTCC...CAGCCATGCCCGGTGCAGTGGGAAGCGGTCACCCCGAGCTGCGCGGCGGATCAT 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000142449.9 ENSMUST00000204709.3 |
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| 3UTR-3UTR GCA 90 bp | GCCGGCCCGCCCGGGGCTCAGTCCGCGGGAGTCCGGAGCGGCGACTTAAGGCAGTCTTGGCAGTCACCGTaGTCTGTGGATTCCTGGTTC | + |
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Preference number: 2 (lower is better) Translates to: AGPPGAQSAGVRSGDLRQSWQSP*SVDSWF Trigger: GAACCAGGAATCCACAGAGCACGGTGACTGCCAAGA...CTGCCTTAAGTCGCCGCTCCGGACTCCCGCGGACTGAGCCCCGGGCGGGCCGGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000142449.9 ENSMUST00000204709.3 |
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| 3UTR-3UTR CCA 90 bp | GCACGTCCCGGCCCCGGGAGGCCCGAGGACTCTACACAGCGCGCGGCTCCAGCCAGTCACCGTGCTCTGTaGATTCCTGGTTCCCAGTCA | + |
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Preference number: 2 (lower is better) Translates to: ARPGPGRPEDSTQRAAPASHRAL*IPGSQS Trigger: TGACTGGGAACCAGGAATCCACAGAGCACGGTGACT...GGCTGGAGCCGCGCGCTGTGTAGAGTCCTCGGGCCTCCCGGGGCCGGGACGTGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000142449.9 ENSMUST00000204709.3 |
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| 3UTR-3UTR CCA 90 bp | CCGCGAGGAAAGTCAGGCAGCGGCTTGGGGACACGGCTGTATTGGGAAGCAGGGGAAGGGAGCGGGGAGTaGGAGTCGGCCAGGTCCCCT | + |
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Preference number: 2 (lower is better) Translates to: PRGKSGSGLGTRLYWEAGEGSGE*ESARSP Trigger: AGGGGACCTGGCCGACTCCCACTCCCCGCTCCCTTC...CCCTGCTTCCCAATACAGCCGTGTCCCCAAGCCGCTGCCTGACTTTCCTCGCGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 5 transcripts: ENSMUST00000090821.10 ENSMUST00000090823.8 ENSMUST00000107217.6 ENSMUST00000142449.9 ENSMUST00000168321.8 |
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| 3UTR CAA 90 bp | CGCACCGCGAGGAAAGTCAGGCAGCGGCTTGGGGACACGGCTGTATaGGGAAGCAGGGGGCTCCTACACAGTAGGAGGAGGCACGTCCCG | + |
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Preference number: 2 (lower is better) Translates to: RTARKVRQRLGDTAV*GSRGLLHSRRRHVP Trigger: CGGGACGTGCCTCCTCCTACTGTGTAGGAGCCCCCTGCTTCCCAATACAGCCGTGTCCCCAAGCCGCTGCCTGACTTTCCTCGCGGTGCG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000090821.10 ENSMUST00000090823.8 ENSMUST00000107217.6 ENSMUST00000142449.9 ENSMUST00000168321.8 |
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| 3UTR CAA 90 bp | AGCTACCTGGGTCAGCAGGGCCCTGCTAGTCAGAGTGAGGAGCGGTaGATGGGTGGCGGGTGGCACAGCAGGATCCAGCAGCGGGTGTGC | + |
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Preference number: 2 (lower is better) Translates to: SYLGQQGPASQSEER*MGGGWHSRIQQRVC Trigger: GCACACCCGCTGCTGGATCCTGCTGTGCCACCCGCCACCCATCAACCGCTCCTCACTCTGACTAGCAGGGCCCTGCTGACCCAGGTAGCT 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000142449.9 ENSMUST00000204709.3 |
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| 3UTR-3UTR GCA 90 bp | GGCCCGCCCGGGGCTCAGTCCGCGGGAGTCCGGAGCGGCGACTTAAGGCAGCGTCAGGCAAGAAGTGTCTaGGAGTTCCAGGGAACAAGA | + |
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Preference number: 2 (lower is better) Translates to: GPPGAQSAGVRSGDLRQRQARSV*EFQGTR Trigger: TCTTGTTCCCTGGAACTCGCAGACACTTCTTGCCTG...ACGCTGCCTTAAGTCGCCGCTCCGGACTCCCGCGGACTGAGCCCCGGGCGGGCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000142449.9 ENSMUST00000204709.3 |
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| 3UTR-3UTR GCA 90 bp | AGCAGGGGGCTCCTACACAGTAGGAGGAGGCACGTCCCGGCCCCGGGAGGCCCGCCATCCAGACTCCTCTaGTCCTTGAACTTGCCCTCA | + |
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Preference number: 2 (lower is better) Translates to: SRGLLHSRRRHVPAPGGPPSRLL*SLNLPS Trigger: TGAGGGCAAGTTCAAGGAGCAGAGGAGTCTGGATGG...CGGGCCTCCCGGGGCCGGGACGTGCCTCCTCCTACTGTGTAGGAGCCCCCTGCT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000142449.9 ENSMUST00000204709.3 |
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| 3UTR-3UTR CCA 90 bp | ATGATCCGCCGCGCAGCTCGGGGTGACCGCTTCCCACTGCACCGGGCATGGCTGAGGAAGGATGTCCAGTaGCGATCCAAGGCCCGAGGT | + |
|
Preference number: 2 (lower is better) Translates to: MIRRAARGDRFPLHRAWLRKDVQ*RSKARG Trigger: ACCTCGGGCCTTGGATCGCCACTGGACATCCTTCCT...CAGCCATGCCCGGTGCAGTGGGAAGCGGTCACCCCGAGCTGCGCGGCGGATCAT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000142449.9 ENSMUST00000204709.3 |
||
| 3UTR-3UTR GCA 90 bp | CGGAGCGGCGACTTAAGGCAGCGTGGCTGGAAGGGAGCGGGGAGTGGGAGTCGGCAGCCTCTGGATCGATaGCATCCACAGTATGGGTCC | + |
|
Preference number: 2 (lower is better) Translates to: RSGDLRQRGWKGAGSGSRQPLDR*HPQYGS Trigger: GGACCCATACTGTGGATGGCATCGATCCAGAGGCTG...CCGACTCCCACTCCCCGCTCCCTTCCAGCCACGCTGCCTTAAGTCGCCGCTCCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000142449.9 ENSMUST00000204709.3 |
||
| 3UTR-3UTR CCA 90 bp | CCTGGGCGGCTGAGGGCCGTGCAGGTAGCGCAGCAGTTCCTCCAGCGTGGTCACATGGCCACAGTGGACTaGGTGGCATCAAAGGGGCAT | + |
|
Preference number: 2 (lower is better) Translates to: PGRLRAVQVAQQFLQRGHMATVD*VASKGH Trigger: ATGCCCCTTTGATGCCACCCAGTCCACTGTGGCCAT...GTGACCACGCTGGAGGAACTGCTGCGCTACCTGCACGGCCCTCAGCCGCCCAGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000142449.9 ENSMUST00000204709.3 |
||
| 3UTR-3UTR TCA 90 bp | CCAATTGCTCCGGAGAGACTTGGGGGCCGAGCTGCAGTGGAGGCCGACTTTCAGTATCCAGAAACGTGCTaGGCGCCTTCCCCGGCACCC | + |
|
Preference number: 2 (lower is better) Translates to: PIAPERLGGRAAVEADFQYPETC*APSPAP Trigger: GGGTGCCGGGGAAGGCGCTCAGCACGTTTCTGGATA...CTGAAAGTCGGCCTCCACTGCAGCTCGGCCCCCAAGTCTCTCCGGAGCAATTGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000090821.10 ENSMUST00000090823.8 ENSMUST00000107217.6 ENSMUST00000142449.9 |
||
| 3UTR-3UTR GCA 90 bp | TCGATGTCCTTGCTCCGACGGCGGTTCGCGCGACGACAAGCACAGGACACCAAGAAGGGGCATCGAGCCTaGCCACTCAGCTCCTCACCC | + |
|
Preference number: 2 (lower is better) Translates to: SMSLLRRRFARRQAQDTKKGHRA*PLSSSP Trigger: GGGTGAGGAGCTGAGTGGGCAGGCTCGATGCCCCTT...CTTGGTGTCCTGTGCTTGTCGTCGCGCGAACCGCCGTCGGAGCAAGGACATCGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000142449.9 ENSMUST00000204709.3 |
||
| 3UTR-3UTR CCA 90 bp | CCAATTGCTCCGGAGAGACTTGGGGGCCGAGCTGCAGTGGAGGCCGACTTTCAGTTAAGGCAGCGTGGCTaGAAGGGAGCGGGGAGTGGG | + |
|
Preference number: 2 (lower is better) Translates to: PIAPERLGGRAAVEADFQLRQRG*KGAGSG Trigger: CCCACTCCCCGCTCCCTTCCAGCCACGCTGCCTTAA...CTGAAAGTCGGCCTCCACTGCAGCTCGGCCCCCAAGTCTCTCCGGAGCAATTGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000090821.10 ENSMUST00000090823.8 ENSMUST00000107217.6 ENSMUST00000142449.9 ENSMUST00000168321.8 |
||
| 3UTR-3UTR CCA 90 bp | CACCGCGAGGAAAGTCAGGCAGCGGCTTGGGGACACGGCTGTATTGGGAAGCAGTTAAGGCAGCGTGGCTaGAAGGGAGCGGGGAGTGGG | + |
|
Preference number: 2 (lower is better) Translates to: HREESQAAAWGHGCIGKQLRQRG*KGAGSG Trigger: CCCACTCCCCGCTCCCTTCCAGCCACGCTGCCTTAA...CTGCTTCCCAATACAGCCGTGTCCCCAAGCCGCTGCCTGACTTTCCTCGCGGTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000090821.10 ENSMUST00000090823.8 ENSMUST00000107217.6 ENSMUST00000142449.9 ENSMUST00000168321.8 |
||
| 3UTR-3UTR CCA 90 bp | CTCCGGAGAGACTTGGGGGCCGAGCTGCAGTGGAGGCCGACTTTCAGGAGCACGTGCCCTCTGCAAAGATaGCCACAGTGGACTGGGTGG | + |
|
Preference number: 2 (lower is better) Translates to: LRRDLGAELQWRPTFRSTCPLQR*PQWTGW Trigger: CCACCCAGTCCACTGTGGCCATCTTTGCAGAGGGCA...CGTGCTCCTGAAAGTCGGCCTCCACTGCAGCTCGGCCCCCAAGTCTCTCCGGAG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000142449.9 |
||
| 3UTR-3UTR CCA 90 bp | CGGAGCGGCGACTTAAGGCAGCGTGGCTGGAAGGGAGCGGGGAGTGGGAGTCGGGCACTGTCCCATCGTTaGAGCCAAGAAACAGGACAG | + |
|
Preference number: 2 (lower is better) Translates to: RSGDLRQRGWKGAGSGSRALSHR*SQETGQ Trigger: CTGTCCTGTTTCTTGGCTCCAACGATGGGACAGTGC...CCGACTCCCACTCCCCGCTCCCTTCCAGCCACGCTGCCTTAAGTCGCCGCTCCG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000142449.9 ENSMUST00000204709.3 |
||
| 3UTR-3UTR TCA 90 bp | CTCCAGGGCCAGACTGACTCCCGGTCGCTCCATCTTGGCAGTCACCGTGCTCTGGCCACAAAAAGCCTGTaGCCCTCAGTGTCCAGCTCC | + |
|
Preference number: 2 (lower is better) Translates to: LQGQTDSRSLHLGSHRALATKSL*PSVSSS Trigger: GGAGCTGGACACTGAGGGTCACAGGCTTTTTGTGGC...CAGAGCACGGTGACTGCCAAGATGGAGCGACCGGGAGTCAGTCTGGCCCTGGAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000142449.9 ENSMUST00000204709.3 |
||
| 3UTR-3UTR GCA 90 bp | CGGAGCGGCGACTTAAGGCAGCGTGGCTGGAAGGGAGCGGGGAGTGGGAGTCGGCTTGGAGTCATACTTTaGAGAACGGAGTGGAGGCTG | + |
|
Preference number: 2 (lower is better) Translates to: RSGDLRQRGWKGAGSGSRLGVIL*RTEWRL Trigger: CAGCCTCCACTCCGTTCTGCAAAGTATGACTCCAAG...CCGACTCCCACTCCCCGCTCCCTTCCAGCCACGCTGCCTTAAGTCGCCGCTCCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000142449.9 ENSMUST00000204709.3 |
||
| 3UTR-3UTR CCA 90 bp | CGCCCTGTGTGTGAGCTCCAAGAGTGGAAGACTGGGGCCCTTGTTGGGCATCACCGACTTAAGGCAGCGTaGCTGGAAGGGAGCGGGGAG | + |
|
Preference number: 2 (lower is better) Translates to: RPVCELQEWKTGALVGHHRLKAA*LEGSGE Trigger: CTCCCCGCTCCCTTCCAGCCACGCTGCCTTAAGTCG...GTGATGCCCAACAAGGGCCCCAGTCTTCCACTCTTGGAGCTCACACACAGGGCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000142449.9 ENSMUST00000204709.3 |
||
| 3UTR-3UTR CCA 90 bp | GACACGGCTGTATTGGGAAGCAGGGGGCTCCTACACAGTAGGAGGAGGCACGTCCGACTTAAGGCAGCGTaGCTGGAAGGGAGCGGGGAG | + |
|
Preference number: 2 (lower is better) Translates to: DTAVLGSRGLLHSRRRHVRLKAA*LEGSGE Trigger: CTCCCCGCTCCCTTCCAGCCACGCTGCCTTAAGTCG...GACGTGCCTCCTCCTACTGTGTAGGAGCCCCCTGCTTCCCAATACAGCCGTGTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000090821.10 ENSMUST00000090823.8 ENSMUST00000107217.6 ENSMUST00000142449.9 ENSMUST00000168321.8 ENSMUST00000204709.3 |
||
| 3UTR-3UTR CCA 90 bp | TCGATGTCCTTGCTCCGACGGCGGTTCGCGCGACGACAAGCACAGGACACCAAGGGGACACGGCTGTATTaGGAAGCAGGGGGCTCCTAC | + |
|
Preference number: 2 (lower is better) Translates to: SMSLLRRRFARRQAQDTKGTRLY*EAGGSY Trigger: GTAGGAGCCCCCTGCTTCCCAATACAGCCGTGTCCC...CTTGGTGTCCTGTGCTTGTCGTCGCGCGAACCGCCGTCGGAGCAAGGACATCGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000142449.9 ENSMUST00000204709.3 |
||
| 3UTR-3UTR CCA 90 bp | CGCACCGCGAGGAAAGTCAGGCAGCGGCTTGGGGACACGGCTGTATTGGGAAGCCTTGTTGGGCATCACTaGGGGAACTGGGGGTCTCAG | + |
|
Preference number: 2 (lower is better) Translates to: RTARKVRQRLGDTAVLGSLVGHH*GNWGSQ Trigger: CTGAGACCCCCAGTTCCCCCAGTGATGCCCAACAAG...GCTTCCCAATACAGCCGTGTCCCCAAGCCGCTGCCTGACTTTCCTCGCGGTGCG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000142449.9 |
||
| 3UTR-3UTR TCA 90 bp | CGGAGCGGCGACTTAAGGCAGCGTGGCTGGAAGGGAGCGGGGAGTGGGAGTCGGGGAATGCTATTGGTCTaGGTAGTGAAGACCCCAAAG | + |
|
Preference number: 2 (lower is better) Translates to: RSGDLRQRGWKGAGSGSRGMLLV*VVKTPK Trigger: CTTTGGGGTCTTCACTACTCAGACCAATAGCATTCC...CCGACTCCCACTCCCCGCTCCCTTCCAGCCACGCTGCCTTAAGTCGCCGCTCCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000142449.9 ENSMUST00000204709.3 |
||
| 3UTR-3UTR GCA 90 bp | AGGGCCAGACTGACTCCCGGTCGCTCCATCTTGGCAGTCACCGTGCTCTGTGGAGCTACCCTGGAAAACTaGACCCTCCCTAAGCGGGCA | + |
|
Preference number: 2 (lower is better) Translates to: RARLTPGRSILAVTVLCGATLEN*TLPKRA Trigger: TGCCCGCTTAGGGAGGGTGCAGTTTTCCAGGGTAGC...TCCACAGAGCACGGTGACTGCCAAGATGGAGCGACCGGGAGTCAGTCTGGCCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000142449.9 ENSMUST00000204709.3 |
||
| 3UTR-3UTR TCA 90 bp | CCAATTGCTCCGGAGAGACTTGGGGGCCGAGCTGCAGTGGAGGCCGACTTTCAGCCGTGGAAAGGTGCCTaGCCTCTATCCAGAAACGTG | + |
|
Preference number: 2 (lower is better) Translates to: PIAPERLGGRAAVEADFQPWKGA*PLSRNV Trigger: CACGTTTCTGGATAGAGGTCAGGCACCTTTCCACGG...CTGAAAGTCGGCCTCCACTGCAGCTCGGCCCCCAAGTCTCTCCGGAGCAATTGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000090821.10 ENSMUST00000090823.8 ENSMUST00000107217.6 ENSMUST00000142449.9 |
||
| 3UTR-3UTR GCA 90 bp | CTCCGGAGAGACTTGGGGGCCGAGCTGCAGTGGAGGCCGACTTTCAGGAGCACGCTTGGAGTCATACTTTaGAGAACGGAGTGGAGGCTG | + |
|
Preference number: 2 (lower is better) Translates to: LRRDLGAELQWRPTFRSTLGVIL*RTEWRL Trigger: CAGCCTCCACTCCGTTCTGCAAAGTATGACTCCAAG...CGTGCTCCTGAAAGTCGGCCTCCACTGCAGCTCGGCCCCCAAGTCTCTCCGGAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000142449.9 |
||
| 3UTR-3UTR GCA 90 bp | GCGTTGTTCCCATTCTGGTTCCATTCCCAGGGGCCCCCGGAGGCACGGAGGTGCGTAGAAGGCGCAGACTaGAGACCCAGGAATGCTATT | + |
|
Preference number: 2 (lower is better) Translates to: ALFPFWFHSQGPPEARRCVEGAD*RPRNAI Trigger: AATAGCATTCCTGGGTCTGCAGTCTGCGCCTTCTAC...GCACCTCCGTGCCTCCGGGGGCCCCTGGGAATGGAACCAGAATGGGAACAACGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000142449.9 ENSMUST00000204709.3 |
||
| 3UTR-3UTR CCA 90 bp | AAGGATGTCCAGTGGCGATCCAAGGCCCGAGGTGAGCCACCCATGTCACGTTTATTAAGGCAGCGTGGCTaGAAGGGAGCGGGGAGTGGG | + |
|
Preference number: 2 (lower is better) Translates to: KDVQWRSKARGEPPMSRLLRQRG*KGAGSG Trigger: CCCACTCCCCGCTCCCTTCCAGCCACGCTGCCTTAA...TAAACGTGACATGGGTGGCTCACCTCGGGCCTTGGATCGCCACTGGACATCCTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000142449.9 ENSMUST00000204709.3 |
||
| 3UTR-3UTR CCA 90 bp | CAGATCGACATCAGTCCCACCAGGTCCCCTGATACTCATGCAGCCTCTGGATCGTTAAGGCAGCGTGGCTaGAAGGGAGCGGGGAGTGGG | + |
|
Preference number: 2 (lower is better) Translates to: QIDISPTRSPDTHAASGSLRQRG*KGAGSG Trigger: CCCACTCCCCGCTCCCTTCCAGCCACGCTGCCTTAA...CGATCCAGAGGCTGCATGAGTATCAGGGGACCTGGTGGGACTGATGTCGATCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000142449.9 ENSMUST00000204709.3 |
||
| 3UTR-3UTR CCA 90 bp | AGTCAGATCGACATCAGTCCCACCAGGTCCCCTGATACTCATGCAGCCTCTGGATACCCACTGCTCTCCTaGGCCCCGGCTCAGCCCACA | + |
|
Preference number: 2 (lower is better) Translates to: SQIDISPTRSPDTHAASGYPLLS*APAQPT Trigger: TGTGGGCTGAGCCGGGGCCCAGGAGAGCAGTGGGTA...TCCAGAGGCTGCATGAGTATCAGGGGACCTGGTGGGACTGATGTCGATCTGACT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000142449.9 |
||
| 3UTR-3UTR CCA 90 bp | TCGATGTCCTTGCTCCGACGGCGGTTCGCGCGACGACAAGCACAGGACACCAAGATGCCATCCACAGTATaGGTCCAGAGAAGCCAGGCA | + |
|
Preference number: 2 (lower is better) Translates to: SMSLLRRRFARRQAQDTKMPSTV*VQRSQA Trigger: TGCCTGGCTTCTCTGGACCCATACTGTGGATGGCAT...CTTGGTGTCCTGTGCTTGTCGTCGCGCGAACCGCCGTCGGAGCAAGGACATCGA 59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000142449.9 ENSMUST00000204709.3 |
||
| 3UTR-3UTR GCA 90 bp | TCGATGTCCTTGCTCCGACGGCGGTTCGCGCGACGACAAGCACAGGACACCAAGCAGGCAAGAAGTGTCTaGGAGTTCCAGGGAACAAGA | + |
|
Preference number: 2 (lower is better) Translates to: SMSLLRRRFARRQAQDTKQARSV*EFQGTR Trigger: TCTTGTTCCCTGGAACTCGCAGACACTTCTTGCCTG...CTTGGTGTCCTGTGCTTGTCGTCGCGCGAACCGCCGTCGGAGCAAGGACATCGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000142449.9 ENSMUST00000204709.3 |
||
| 3UTR-3UTR CCA 90 bp | AAGGATGTCCAGTGGCGATCCAAGGCCCGAGGTGAGCCACCCATGTCACGTTTAATGGCCACAGTGGACTaGGTGGCATCAAAGGGGCAT | + |
|
Preference number: 2 (lower is better) Translates to: KDVQWRSKARGEPPMSRLMATVD*VASKGH Trigger: ATGCCCCTTTGATGCCACCCAGTCCACTGTGGCCAT...TAAACGTGACATGGGTGGCTCACCTCGGGCCTTGGATCGCCACTGGACATCCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000142449.9 ENSMUST00000204709.3 |
||
| 3UTR-3UTR TCA 90 bp | GCCATCCACAGTATGGGTCCAGAGAAGCCAGGCAGCTCCTCTGACATGCTCCATTCATCAGGTAGGTCTTaGGAGGAGGAGAACGAGGCA | + |
|
Preference number: 2 (lower is better) Translates to: AIHSMGPEKPGSSSDMLHSSGRS*EEENEA Trigger: TGCCTCGTTCTCCTCCTCTCAAGACCTACCTGATGA...ATGGAGCATGTCAGAGGAGCTGCCTGGCTTCTCTGGACCCATACTGTGGATGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000142449.9 ENSMUST00000204709.3 |
||
| 3UTR-3UTR GCA 90 bp | GACCCCCTGGAGGTAGCACCTTCAGCACTGTCCCATCGTTGGAGCCAAGAAACACCATCCAGACTCCTCTaGTCCTTGAACTTGCCCTCA | + |
|
Preference number: 2 (lower is better) Translates to: DPLEVAPSALSHRWSQETPSRLL*SLNLPS Trigger: TGAGGGCAAGTTCAAGGAGCAGAGGAGTCTGGATGG...TGTTTCTTGGCTCCAACGATGGGACAGTGCTGAAGGTGCTACCTCCAGGGGGTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000142449.9 ENSMUST00000204709.3 |
||
| 3UTR-3UTR CCA 90 bp | GGAGCCAAGAAACAGGACAGTAGTATTTCTGTGGGGACCAGCCATTCCGTCCACCCACAGTGGACTGGGTaGCATCAAAGGGGCATCGAG | + |
|
Preference number: 2 (lower is better) Translates to: GAKKQDSSISVGTSHSVHPQWTG*HQRGIE Trigger: CTCGATGCCCCTTTGATGCCACCCAGTCCACTGTGG...GTGGACGGAATGGCTGGTCCCCACAGAAATACTACTGTCCTGTTTCTTGGCTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000142449.9 ENSMUST00000204709.3 |
||
| 3UTR-3UTR TCA 90 bp | GCCCCGGCTCAGCCCACACACACCAGGTCTTTGATTGCCTCCTTCAGGAAACCTGGAATGCTATTGGTCTaGGTAGTGAAGACCCCAAAG | + |
|
Preference number: 2 (lower is better) Translates to: APAQPTHTRSLIASFRKPGMLLV*VVKTPK Trigger: CTTTGGGGTCTTCACTACTCAGACCAATAGCATTCC...AGGTTTCCTGAAGGAGGCAATCAAAGACCTGGTGTGTGTGGGCTGAGCCGGGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000142449.9 |
||
| 3UTR-3UTR GCA 90 bp | AAGGATGTCCAGTGGCGATCCAAGGCCCGAGGTGAGCCACCCATGTCACGTTTAGTACAAACTGCCCTCTaGAAAGATGGCCACAGTGGA | + |
|
Preference number: 2 (lower is better) Translates to: KDVQWRSKARGEPPMSRLVQTAL*KDGHSG Trigger: TCCACTGTGGCCATCTTTGCAGAGGGCAGTTTGTAC...TAAACGTGACATGGGTGGCTCACCTCGGGCCTTGGATCGCCACTGGACATCCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000142449.9 ENSMUST00000204709.3 |
||
| 3UTR-3UTR GCA 90 bp | CAGCTCCTCACCCTCCTGTTGCAGAGATGTTATCCCATAGCTGCGGCACATAGGCAGGCAAGAAGTGTCTaGGAGTTCCAGGGAACAAGA | + |
|
Preference number: 2 (lower is better) Translates to: QLLTLLLQRCYPIAAAHRQARSV*EFQGTR Trigger: TCTTGTTCCCTGGAACTCGCAGACACTTCTTGCCTG...CCTATGTGCCGCAGCTATGGGATAACATCTCTGCAACAGGAGGGTGAGGAGCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000131620.8 ENSMUST00000142449.9 ENSMUST00000204709.3 |
||
| 3UTR CAA 90 bp | ACGCATAGACAAAGTGTGGCTCTCGAAGCCACTTGGAGTCATACTTaGCAGAACGGAGTGGAGGCTGAGGTCCAAGACTTCTGTAAACTA | + |
|
Preference number: 2 (lower is better) Translates to: THRQSVALEATWSHT*QNGVEAEVQDFCKL Trigger: TAGTTTACAGAAGTCTTGGACCTCAGCCTCCACTCCGTTCTGCAAAGTATGACTCCAAGTGGCTTCGAGAGCCACACTTTGTCTATGCGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000142449.9 ENSMUST00000204709.3 |
||
| 3UTR TCA 72 bp | CGGAGTACCTGGCCGGGCCTCCCGAGGGCACTCGCGTaGGCAGGCCCGGGGGCGCCCGGTGTGTGGGAAAGG | + |
|
Preference number: 3 (lower is better) Translates to: RSTWPGLPRALA*AGPGAPGVWER Trigger: CCTTTCCCACACACCGGGCGCCCCCGGGCCTGCTCACGCGAGTGCCCTCGGGAGGCCCGGCCAGGTACTCCG 76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000142449.9 ENSMUST00000204709.3 |
||
| 3UTR TCA 72 bp | CGGGCGGGCGCGAGCAGCTTCCGTCAGAAGTTGAAATaGCCACCGTGCGGGGCGGGCTGCGGCGGGGAGGCG | + |
|
Preference number: 3 (lower is better) Translates to: RAGASSFRQKLK*PPCGAGCGGEA Trigger: CGCCTCCCCGCCGCAGCCCGCCCCGCACGGTGGTCATTTCAACTTCTGACGGAAGCTGCTCGCGCCCGCCCG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000142449.9 ENSMUST00000204709.3 |
||
| 3UTR GCA 72 bp | CGCAGCAGTTCCTCCAGCGTGGTCACCTCTACCGCCTaGCCGGGGCAGCCAGGGGGCGGTGGCCTCACCAGC | + |
|
Preference number: 3 (lower is better) Translates to: RSSSSSVVTSTA*PGQPGGGGLTS Trigger: GCTGGTGAGGCCACCGCCCCCTGGCTGCCCCGGGCAGGCGGTAGAGGTGACCACGCTGGAGGAACTGCTGCG 74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000142449.9 ENSMUST00000204709.3 |
||
| 3UTR-3UTR CAA 90 bp | AGCAGGGGGCTCCTACACAGTAGGAGGAGGCACGTCCCGGCCCCGGGAGGCCCGGGGGTCTCGATGTCCTaGCTCCGACGGCGGTTCGCG | + |
|
Preference number: 3 (lower is better) Translates to: SRGLLHSRRRHVPAPGGPGVSMS*LRRRFA Trigger: CGCGAACCGCCGTCGGAGCAAGGACATCGAGACCCC...CGGGCCTCCCGGGGCCGGGACGTGCCTCCTCCTACTGTGTAGGAGCCCCCTGCT 72% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000142449.9 ENSMUST00000204709.3 |
||
| 3UTR TCA 72 bp | CTCGACGGGCGGGCGCGAGCAGCTTCCGTCAGAAGTTaGAATGACCACCGTGCGGGGCGGGCTGCGGCGGGG | + |
|
Preference number: 3 (lower is better) Translates to: LDGRARAASVRS*NDHRAGRAAAG Trigger: CCCCGCCGCAGCCCGCCCCGCACGGTGGTCATTTCAACTTCTGACGGAAGCTGCTCGCGCCCGCCCGTCGAG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000142449.9 ENSMUST00000204709.3 |
||
| 3UTR-3UTR CAA 90 bp | GCACGTCCCGGCCCCGGGAGGCCCGAGGACTCTACACAGCGCGCGGCTCCAGCCAAGTCAGGCAGCGGCTaGGGGACACGGCTGTATTGG | + |
|
Preference number: 3 (lower is better) Translates to: ARPGPGRPEDSTQRAAPAKSGSG*GTRLYW Trigger: CCAATACAGCCGTGTCCCCAAGCCGCTGCCTGACTT...GGCTGGAGCCGCGCGCTGTGTAGAGTCCTCGGGCCTCCCGGGGCCGGGACGTGC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000090821.10 ENSMUST00000090823.8 ENSMUST00000107217.6 ENSMUST00000142449.9 ENSMUST00000168321.8 |
||
| 3UTR-3UTR CAA 90 bp | CGGAGCGGCGACTTAAGGCAGCGTGGCTGGAAGGGAGCGGGGAGTGGGAGTCGGGGGGTCTCGATGTCCTaGCTCCGACGGCGGTTCGCG | + |
|
Preference number: 3 (lower is better) Translates to: RSGDLRQRGWKGAGSGSRGVSMS*LRRRFA Trigger: CGCGAACCGCCGTCGGAGCAAGGACATCGAGACCCC...CCGACTCCCACTCCCCGCTCCCTTCCAGCCACGCTGCCTTAAGTCGCCGCTCCG 70% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000142449.9 ENSMUST00000204709.3 |
||
| 3UTR TCA 72 bp | CAGCTCCAGCCCTATGATCCGCCGCGCAGCTCGGGGTaGCCGCTTCCCACTGCACCGGGCATGGCTGTAGGC | + |
|
Preference number: 3 (lower is better) Translates to: QLQPYDPPRSSG*PLPTAPGMAVG Trigger: GCCTACAGCCATGCCCGGTGCAGTGGGAAGCGGTCACCCCGAGCTGCGCGGCGGATCATAGGGCTGGAGCTG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000142449.9 ENSMUST00000204709.3 |
||
| 3UTR CCA 72 bp | GACTTCACGTCCACCCTCTTCAGGGAGCGGCCGCGATaGCCTTCGGGCCGGCCCAGGTACAGGAGGTGCCTC | + |
|
Preference number: 3 (lower is better) Translates to: DFTSTLFRERPR*PSGRPRYRRCL Trigger: GAGGCACCTCCTGTACCTGGGCCGGCCCGAAGGCCATCGCGGCCGCTCCCTGAAGAGGGTGGACGTGAAGTC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000142449.9 ENSMUST00000204709.3 |
||
| 3UTR-3UTR CAA 90 bp | ACGAACAGCGAGGCGCCGGGCTCCGAGGCGGGCGGCCGGGAGGTGAACGGGGCGCTCCTCACCCTCCTGTaGCAGAGATGTTATCCCATA | + |
|
Preference number: 3 (lower is better) Translates to: TNSEAPGSEAGGREVNGALLTLL*QRCYPI Trigger: TATGGGATAACATCTCTGCAACAGGAGGGTGAGGAG...CGCCCCGTTCACCTCCCGGCCGCCCGCCTCGGAGCCCGGCGCCTCGCTGTTCGT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000142449.9 ENSMUST00000204709.3 |
||
| 3UTR CCA 72 bp | CCCCTCCCGCACCGCGAGGAAAGTCAGGCAGCGGCTTaGGGACACGGCTGTATTGGGAAGCAGGGGGCTCCT | + |
|
Preference number: 3 (lower is better) Translates to: PLPHREESQAAA*GHGCIGKQGAP Trigger: AGGAGCCCCCTGCTTCCCAATACAGCCGTGTCCCCAAGCCGCTGCCTGACTTTCCTCGCGGTGCGGGAGGGG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000090821.10 ENSMUST00000090823.8 ENSMUST00000107217.6 ENSMUST00000142449.9 ENSMUST00000168321.8 |
||
| 3UTR CCA 72 bp | TGTAGAGCTGGGGCGTTTGCGCTGCATCTCCATCCTTaGGCGGAGGCGGGGGCTCAGGACCGCCACCGTGCA | + |
|
Preference number: 3 (lower is better) Translates to: CRAGAFALHLHP*AEAGAQDRHRA Trigger: TGCACGGTGGCGGTCCTGAGCCCCCGCCTCCGCCCAAGGATGGAGATGCAGCGCAAACGCCCCAGCTCTACA 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000142449.9 ENSMUST00000204709.3 |
||
| 3UTR CCA 72 bp | CGACTTAAGGCAGCGTGGCTGGAAGGGAGCGGGGAGTaGGAGTCGGCCAGGTCCCCTGAAATGCTGGCGCTC | + |
|
Preference number: 3 (lower is better) Translates to: RLKAAWLEGSGE*ESARSPEMLAL Trigger: GAGCGCCAGCATTTCAGGGGACCTGGCCGACTCCCACTCCCCGCTCCCTTCCAGCCACGCTGCCTTAAGTCG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000090821.10 ENSMUST00000090823.8 ENSMUST00000107217.6 ENSMUST00000142449.9 ENSMUST00000168321.8 ENSMUST00000204709.3 |
||
| 3UTR-3UTR CAA 90 bp | GTCCGCGGGAGTCCGGAGCGGCGACTTAAGGCAGCGTGGCTGGAAGGGAGCGGGAGCAGCGGGTGTGCCTaGATGAAGAGCAGGACATCA | + |
|
Preference number: 3 (lower is better) Translates to: VRGSPERRLKAAWLEGSGSSGCA*MKSRTS Trigger: TGATGTCCTGCTCTTCATCAAGGCACACCCGCTGCT...CCCGCTCCCTTCCAGCCACGCTGCCTTAAGTCGCCGCTCCGGACTCCCGCGGAC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000142449.9 ENSMUST00000204709.3 |
||
| 3UTR-3UTR CAA 90 bp | GCGTTGTTCCCATTCTGGTTCCATTCCCAGGGGCCCCCGGAGGCACGGAGGTGCGGAAGACTGGGGCCCTaGTTGGGCATCACTGGGGGA | + |
|
Preference number: 3 (lower is better) Translates to: ALFPFWFHSQGPPEARRCGRLGP*LGITGG Trigger: TCCCCCAGTGATGCCCAACAAGGGCCCCAGTCTTCC...GCACCTCCGTGCCTCCGGGGGCCCCTGGGAATGGAACCAGAATGGGAACAACGC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000142449.9 ENSMUST00000204709.3 |
||
| 3UTR TCA 72 bp | GTCAGCAGGGCCCTGCTAGTCAGAGTGAGGAGCGGTTaGTGGGTGGCGGGTGGCACAGCAGGATCCAGCAGC | + |
|
Preference number: 3 (lower is better) Translates to: VSRALLVRVRSG*WVAGGTAGSSS Trigger: GCTGCTGGATCCTGCTGTGCCACCCGCCACCCATCAACCGCTCCTCACTCTGACTAGCAGGGCCCTGCTGAC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000142449.9 ENSMUST00000204709.3 |
||
| 3UTR TCA 72 bp | AAAGCCTGTGACCCTCAGTGTCCAGCTCCAGCCCTATaGTCCGCCGCGCAGCTCGGGGTGACCGCTTCCCAC | + |
|
Preference number: 3 (lower is better) Translates to: KACDPQCPAPAL*SAAQLGVTASH Trigger: GTGGGAAGCGGTCACCCCGAGCTGCGCGGCGGATCATAGGGCTGGAGCTGGACACTGAGGGTCACAGGCTTT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000142449.9 ENSMUST00000204709.3 |
||
| 3UTR GCA 72 bp | AGGCAGGAAGGTAGTGTAGAGCTGGGGCGTTTGCGCTaGATCTCCATCCTTGGGCGGAGGCGGGGGCTCAGG | + |
|
Preference number: 3 (lower is better) Translates to: RQEGSVELGRLR*ISILGRRRGLR Trigger: CCTGAGCCCCCGCCTCCGCCCAAGGATGGAGATGCAGCGCAAACGCCCCAGCTCTACACTACCTTCCTGCCT 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000142449.9 ENSMUST00000204709.3 |
||
| 3UTR CCA 72 bp | GGTCCCTGCGCACGCCCTGTGTGTGAGCTCCAAGAGTaGAAGACTGGGGCCCTTGTTGGGCATCACTGGGGG | + |
|
Preference number: 3 (lower is better) Translates to: GPCARPVCELQE*KTGALVGHHWG Trigger: CCCCCAGTGATGCCCAACAAGGGCCCCAGTCTTCCACTCTTGGAGCTCACACACAGGGCGTGCGCAGGGACC 65% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000142449.9 ENSMUST00000204709.3 |
||
| 3UTR TCA 72 bp | GAGGCTGGGGAAAGGTCCCTGCGCACGCCCTGTGTGTaGGCTCCAAGAGTGGAAGACTGGGGCCCTTGTTGG | + |
|
Preference number: 3 (lower is better) Translates to: EAGERSLRTPCV*APRVEDWGPCW Trigger: CCAACAAGGGCCCCAGTCTTCCACTCTTGGAGCTCACACACAGGGCGTGCGCAGGGACCTTTCCCCAGCCTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000142449.9 ENSMUST00000204709.3 |
||
| 3UTR-3UTR CAA 90 bp | CCAATTGCTCCGGAGAGACTTGGGGGCCGAGCTGCAGTGGAGGCCGACTTTCAGGGGGACACGGCTGTATaGGGAAGCAGGGGGCTCCTA | + |
|
Preference number: 3 (lower is better) Translates to: PIAPERLGGRAAVEADFQGDTAV*GSRGLL Trigger: TAGGAGCCCCCTGCTTCCCAATACAGCCGTGTCCCC...CTGAAAGTCGGCCTCCACTGCAGCTCGGCCCCCAAGTCTCTCCGGAGCAATTGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 5 transcripts: ENSMUST00000090821.10 ENSMUST00000090823.8 ENSMUST00000107217.6 ENSMUST00000142449.9 ENSMUST00000168321.8 |
||
| 3UTR-3UTR CAA 90 bp | TGGGAAGCAGGGGGCTCCTACACAGTAGGAGGAGGCACGTCCCGGCCCCGGGAGCTCCTCACCCTCCTGTaGCAGAGATGTTATCCCATA | + |
|
Preference number: 3 (lower is better) Translates to: WEAGGSYTVGGGTSRPRELLTLL*QRCYPI Trigger: TATGGGATAACATCTCTGCAACAGGAGGGTGAGGAG...CTCCCGGGGCCGGGACGTGCCTCCTCCTACTGTGTAGGAGCCCCCTGCTTCCCA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000142449.9 ENSMUST00000204709.3 |
||
| 3UTR GCA 72 bp | CAAGCCAATTGCTCCGGAGAGACTTGGGGGCCGAGCTaGAGTGGAGGCCGACTTTCAGGAGCACGGTTACCC | + |
|
Preference number: 3 (lower is better) Translates to: QANCSGETWGPS*SGGRLSGARLP Trigger: GGGTAACCGTGCTCCTGAAAGTCGGCCTCCACTGCAGCTCGGCCCCCAAGTCTCTCCGGAGCAATTGGCTTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000090821.10 ENSMUST00000090823.8 ENSMUST00000107217.6 ENSMUST00000142449.9 ENSMUST00000168321.8 |
||
| 3UTR CCA 72 bp | GCTAGTCAGAGTGAGGAGCGGTTGATGGGTGGCGGGTaGCACAGCAGGATCCAGCAGCGGGTGTGCCTTGAT | + |
|
Preference number: 3 (lower is better) Translates to: ASQSEERLMGGG*HSRIQQRVCLD Trigger: ATCAAGGCACACCCGCTGCTGGATCCTGCTGTGCCACCCGCCACCCATCAACCGCTCCTCACTCTGACTAGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000142449.9 ENSMUST00000204709.3 |
||
| 3UTR-3UTR CAA 90 bp | CGGAGCGGCGACTTAAGGCAGCGTGGCTGGAAGGGAGCGGGGAGTGGGAGTCGGACACACACCAGGTCTTaGATTGCCTCCTTCAGGAAA | + |
|
Preference number: 3 (lower is better) Translates to: RSGDLRQRGWKGAGSGSRTHTRS*IASFRK Trigger: TTTCCTGAAGGAGGCAATCAAAGACCTGGTGTGTGT...CCGACTCCCACTCCCCGCTCCCTTCCAGCCACGCTGCCTTAAGTCGCCGCTCCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000090821.10 ENSMUST00000090823.8 ENSMUST00000107217.6 ENSMUST00000142449.9 ENSMUST00000168321.8 |
||
| 3UTR TCA 72 bp | CGTGGAAAGGTGCCTGACCTCTATCCAGAAACGTGCTaGGCGCCTTCCCCGGCACCCCCAATCAGTACCCAC | + |
|
Preference number: 3 (lower is better) Translates to: RGKVPDLYPETC*APSPAPPISTH Trigger: GTGGGTACTGATTGGGGGTGCCGGGGAAGGCGCTCAGCACGTTTCTGGATAGAGGTCAGGCACCTTTCCACG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000090821.10 ENSMUST00000090823.8 ENSMUST00000107217.6 ENSMUST00000142449.9 |
||
| 3UTR TCA 72 bp | TCTCCCACCCCAGAGTGTAGGCCGTGGAAAGGTGCCTaGCCTCTATCCAGAAACGTGCTGAGCGCCTTCCCC | + |
|
Preference number: 3 (lower is better) Translates to: SPTPECRPWKGA*PLSRNVLSAFP Trigger: GGGGAAGGCGCTCAGCACGTTTCTGGATAGAGGTCAGGCACCTTTCCACGGCCTACACTCTGGGGTGGGAGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090821.10 ENSMUST00000090823.8 ENSMUST00000107217.6 ENSMUST00000142449.9 |
||
| 3UTR GCA 72 bp | GTATGGGTCCAGAGAAGCCAGGCAGCTCCTCTGACATaGTCCATGCCGGGCACACCGGCTGAGAGAGAGGTA | + |
|
Preference number: 3 (lower is better) Translates to: VWVQRSQAAPLT*SMPGTPAEREV Trigger: TACCTCTCTCTCAGCCGGTGTGCCCGGCATGGAGCATGTCAGAGGAGCTGCCTGGCTTCTCTGGACCCATAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000142449.9 ENSMUST00000204709.3 |
||
| 3UTR-3UTR CAA 90 bp | GCCCCGGCTCAGCCCACACACACCAGGTCTTTGATTGCCTCCTTCAGGAAACCTAGACTGGGGCCCTTGTaGGGCATCACTGGGGGAACT | + |
|
Preference number: 3 (lower is better) Translates to: APAQPTHTRSLIASFRKPRLGPL*GITGGT Trigger: AGTTCCCCCAGTGATGCCCAACAAGGGCCCCAGTCT...AGGTTTCCTGAAGGAGGCAATCAAAGACCTGGTGTGTGTGGGCTGAGCCGGGGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000142449.9 |
||
| 3UTR CCA 72 bp | AACTGCCCTCTGCAAAGATGGCCACAGTGGACTGGGTaGCATCAAAGGGGCATCGAGCCTGCCCACTCAGCT | + |
|
Preference number: 3 (lower is better) Translates to: NCPLQRWPQWTG*HQRGIEPAHSA Trigger: AGCTGAGTGGGCAGGCTCGATGCCCCTTTGATGCCACCCAGTCCACTGTGGCCATCTTTGCAGAGGGCAGTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000142449.9 ENSMUST00000204709.3 |
||
| 3UTR-3UTR CAA 90 bp | CGCACCGCGAGGAAAGTCAGGCAGCGGCTTGGGGACACGGCTGTATTGGGAAGCACACACACCAGGTCTTaGATTGCCTCCTTCAGGAAA | + |
|
Preference number: 3 (lower is better) Translates to: RTARKVRQRLGDTAVLGSTHTRS*IASFRK Trigger: TTTCCTGAAGGAGGCAATCAAAGACCTGGTGTGTGT...GCTTCCCAATACAGCCGTGTCCCCAAGCCGCTGCCTGACTTTCCTCGCGGTGCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000090821.10 ENSMUST00000090823.8 ENSMUST00000107217.6 ENSMUST00000142449.9 ENSMUST00000168321.8 |
||
| 3UTR-3UTR CAA 90 bp | TTCCCTCTCCCACCCCAGAGTGTAGGCCGTGGAAAGGTGCCTGACCTCTATCCACCAGGGACAGAGCAGTaGAGCCTCAGCTTAAGGAAG | + |
|
Preference number: 3 (lower is better) Translates to: FPLPPQSVGRGKVPDLYPPGTEQ*SLSLRK Trigger: CTTCCTTAAGCTGAGGCTCAACTGCTCTGTCCCTGG...TGGATAGAGGTCAGGCACCTTTCCACGGCCTACACTCTGGGGTGGGAGAGGGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142449.9 |
||
| 3UTR TCA 72 bp | AAGGAAGGATGTCCAGTGGCGATCCAAGGCCCGAGGTaGGCCACCCATGTCACGTTTACATACCCGGGCTAC | + |
|
Preference number: 3 (lower is better) Translates to: KEGCPVAIQGPR*ATHVTFTYPGY Trigger: GTAGCCCGGGTATGTAAACGTGACATGGGTGGCTCACCTCGGGCCTTGGATCGCCACTGGACATCCTTCCTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000142449.9 ENSMUST00000204709.3 |
||
| 3UTR TCA 72 bp | AGCTCCTCTGACATGCTCCATGCCGGGCACACCGGCTaGGAGAGAGGTAGACGATACATCCAGGAAAGGCCA | + |
|
Preference number: 3 (lower is better) Translates to: SSSDMLHAGHTG*ERGRRYIQERP Trigger: TGGCCTTTCCTGGATGTATCGTCTACCTCTCTCTCAGCCGGTGTGCCCGGCATGGAGCATGTCAGAGGAGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000142449.9 ENSMUST00000204709.3 |
||
| 3UTR CCA 72 bp | TACAAACTGCCCTCTGCAAAGATGGCCACAGTGGACTaGGTGGCATCAAAGGGGCATCGAGCCTGCCCACTC | + |
|
Preference number: 3 (lower is better) Translates to: YKLPSAKMATVD*VASKGHRACPL Trigger: GAGTGGGCAGGCTCGATGCCCCTTTGATGCCACCCAGTCCACTGTGGCCATCTTTGCAGAGGGCAGTTTGTA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000142449.9 ENSMUST00000204709.3 |
||
| 3UTR CCA 72 bp | CTGAGTACAAACTGCCCTCTGCAAAGATGGCCACAGTaGACTGGGTGGCATCAAAGGGGCATCGAGCCTGCC | + |
|
Preference number: 3 (lower is better) Translates to: LSTNCPLQRWPQ*TGWHQRGIEPA Trigger: GGCAGGCTCGATGCCCCTTTGATGCCACCCAGTCCACTGTGGCCATCTTTGCAGAGGGCAGTTTGTACTCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000142449.9 ENSMUST00000204709.3 |
||
| 3UTR CCA 72 bp | AGCCACCCATGTCACGTTTACATACCCGGGCTACCCTaGAAAACTGCACCCTCCCTAAGCGGGCATCCTCCA | + |
|
Preference number: 3 (lower is better) Translates to: SHPCHVYIPGLP*KTAPSLSGHPP Trigger: TGGAGGATGCCCGCTTAGGGAGGGTGCAGTTTTCCAGGGTAGCCCGGGTATGTAAACGTGACATGGGTGGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000142449.9 ENSMUST00000204709.3 |
||
| 3UTR CCA 72 bp | TCCCGGTCGCTCCATCTTGGCAGTCACCGTGCTCTGTaGATTCCTGGTTCCCAGTCAGATCGACATCAGTCC | + |
|
Preference number: 3 (lower is better) Translates to: SRSLHLGSHRAL*IPGSQSDRHQS Trigger: GGACTGATGTCGATCTGACTGGGAACCAGGAATCCACAGAGCACGGTGACTGCCAAGATGGAGCGACCGGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000142449.9 ENSMUST00000204709.3 |
||
| 3UTR TCA 72 bp | TCCCAGTCAGATCGACATCAGTCCCACCAGGTCCCCTaGTACTCATGCAGCCTCTGGATCGATGCCATCCAC | + |
|
Preference number: 3 (lower is better) Translates to: SQSDRHQSHQVP*YSCSLWIDAIH Trigger: GTGGATGGCATCGATCCAGAGGCTGCATGAGTATCAGGGGACCTGGTGGGACTGATGTCGATCTGACTGGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000142449.9 ENSMUST00000204709.3 |
||
| 3UTR-3UTR CAA 90 bp | GACCCCCTGGAGGTAGCACCTTCAGCACTGTCCCATCGTTGGAGCCAAGAAACAAGACTCCTCTGCTCCTaGAACTTGCCCTCAAAGCCA | + |
|
Preference number: 3 (lower is better) Translates to: DPLEVAPSALSHRWSQETRLLCS*NLPSKP Trigger: TGGCTTTGAGGGCAAGTTCAAGGAGCAGAGGAGTCT...TGTTTCTTGGCTCCAACGATGGGACAGTGCTGAAGGTGCTACCTCCAGGGGGTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000142449.9 ENSMUST00000204709.3 |
||
| 3UTR TCA 72 bp | ATCTCTTCCAAGACGATAGGCTCAGAGCCCAAAGACTaGCCCCCTGGAGGTAGCACCTTCAGCACTGTCCCA | + |
|
Preference number: 3 (lower is better) Translates to: ISSKTIGSEPKD*PPGGSTFSTVP Trigger: TGGGACAGTGCTGAAGGTGCTACCTCCAGGGGGTCAGTCTTTGGGCTCTGAGCCTATCGTCTTGGAAGAGAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000142449.9 ENSMUST00000204709.3 |
||
| 3UTR-3UTR CAA 90 bp | TTCCCTCTCCCACCCCAGAGTGTAGGCCGTGGAAAGGTGCCTGACCTCTATCCAACACACACCAGGTCTTaGATTGCCTCCTTCAGGAAA | + |
|
Preference number: 3 (lower is better) Translates to: FPLPPQSVGRGKVPDLYPTHTRS*IASFRK Trigger: TTTCCTGAAGGAGGCAATCAAAGACCTGGTGTGTGT...TGGATAGAGGTCAGGCACCTTTCCACGGCCTACACTCTGGGGTGGGAGAGGGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090821.10 ENSMUST00000090823.8 ENSMUST00000107217.6 ENSMUST00000142449.9 |
||
| 3UTR-3UTR CAA 90 bp | GCCATCCACAGTATGGGTCCAGAGAAGCCAGGCAGCTCCTCTGACATGCTCCATACTTGGAGTCATACTTaGCAGAACGGAGTGGAGGCT | + |
|
Preference number: 3 (lower is better) Translates to: AIHSMGPEKPGSSSDMLHTWSHT*QNGVEA Trigger: AGCCTCCACTCCGTTCTGCAAAGTATGACTCCAAGT...ATGGAGCATGTCAGAGGAGCTGCCTGGCTTCTCTGGACCCATACTGTGGATGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000142449.9 ENSMUST00000204709.3 |
||
| 3UTR CCA 72 bp | TCGTTGGAGCCAAGAAACAGGACAGTAGTATTTCTGTaGGGACCAGCCATTCCGTCCACAGCTACCTGGGTC | + |
|
Preference number: 3 (lower is better) Translates to: SLEPRNRTVVFL*GPAIPSTATWV Trigger: GACCCAGGTAGCTGTGGACGGAATGGCTGGTCCCCACAGAAATACTACTGTCCTGTTTCTTGGCTCCAACGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000142449.9 ENSMUST00000204709.3 |
||
| 3UTR-3UTR CAA 90 bp | AGTCAGATCGACATCAGTCCCACCAGGTCCCCTGATACTCATGCAGCCTCTGGAGGCTCTCGAAGCCACTaGGAGTCATACTTTGCAGAA | + |
|
Preference number: 3 (lower is better) Translates to: SQIDISPTRSPDTHAASGGSRSH*ESYFAE Trigger: TTCTGCAAAGTATGACTCCAAGTGGCTTCGAGAGCC...TCCAGAGGCTGCATGAGTATCAGGGGACCTGGTGGGACTGATGTCGATCTGACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000142449.9 ENSMUST00000204709.3 |
||
| 3UTR CCA 72 bp | CCAACGCATAGACAAAGTGTGGCTCTCGAAGCCACTTaGAGTCATACTTTGCAGAACGGAGTGGAGGCTGAG | + |
|
Preference number: 3 (lower is better) Translates to: PTHRQSVALEAT*SHTLQNGVEAE Trigger: CTCAGCCTCCACTCCGTTCTGCAAAGTATGACTCCAAGTGGCTTCGAGAGCCACACTTTGTCTATGCGTTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000142449.9 ENSMUST00000204709.3 |
||
| 3UTR GCA 72 bp | AAAGTGTGGCTCTCGAAGCCACTTGGAGTCATACTTTaGAGAACGGAGTGGAGGCTGAGGTCCAAGACTTCT | + |
|
Preference number: 3 (lower is better) Translates to: KVWLSKPLGVIL*RTEWRLRSKTS Trigger: AGAAGTCTTGGACCTCAGCCTCCACTCCGTTCTGCAAAGTATGACTCCAAGTGGCTTCGAGAGCCACACTTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000142449.9 ENSMUST00000204709.3 |
||
| 3UTR CCA 72 bp | AAACTACAGCATCACTGGCCTGGAAATCTGCTGCTGTaGCTGAGTACAAACTGCCCTCTGCAAAGATGGCCA | + |
|
Preference number: 3 (lower is better) Translates to: KLQHHWPGNLLL*LSTNCPLQRWP Trigger: TGGCCATCTTTGCAGAGGGCAGTTTGTACTCAGCCACAGCAGCAGATTTCCAGGCCAGTGATGCTGTAGTTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000142449.9 ENSMUST00000204709.3 |
||
| 3UTR CCA 72 bp | TCGAAGCCACTTGGAGTCATACTTTGCAGAACGGAGTaGAGGCTGAGGTCCAAGACTTCTGTAAACTACAGC | + |
|
Preference number: 3 (lower is better) Translates to: SKPLGVILCRTE*RLRSKTSVNYS Trigger: GCTGTAGTTTACAGAAGTCTTGGACCTCAGCCTCCACTCCGTTCTGCAAAGTATGACTCCAAGTGGCTTCGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000142449.9 ENSMUST00000204709.3 |
||
| CDS-3UTR TCA 90 bp | GGCCCGCCCGGGGCTCAGTCCGCGGGAGTCCGGAGCGGCGACTTAAGGCAGCGTCCGCGCAGCTCGGGGTaGCCGCTTCCCACTGCACCG | + |
|
Preference number: 4 (lower is better) Translates to: GPPGAQSAGVRSGDLRQRPRSSG*PLPTAP Trigger: CGGTGCAGTGGGAAGCGGTCACCCCGAGCTGCGCGG...ACGCTGCCTTAAGTCGCCGCTCCGGACTCCCGCGGACTGAGCCCCGGGCGGGCC 76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000090821.10 ENSMUST00000090823.8 ENSMUST00000107217.6 ENSMUST00000168321.8 |
||
| CDS-3UTR GCA 90 bp | GCCGGCCCGCCCGGGGCTCAGTCCGCGGGAGTCCGGAGCGGCGACTTAAGGCAGTCAGGACCGCCACCGTaGAGCCGGGCCAGGCTGCGA | + |
|
Preference number: 4 (lower is better) Translates to: AGPPGAQSAGVRSGDLRQSGPPP*SRARLR Trigger: TCGCAGCCTGGCCCGGCTGCACGGTGGCGGTCCTGA...CTGCCTTAAGTCGCCGCTCCGGACTCCCGCGGACTGAGCCCCGGGCGGGCCGGC 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090821.10 ENSMUST00000090823.8 ENSMUST00000107217.6 ENSMUST00000168321.8 |
||
| CDS-3UTR CCA 90 bp | GGCCGGCCCGCCCGGGGCTCAGTCCGCGGGAGTCCGGAGCGGCGACTTAAGGCAGCGTCGTCTCCGGCGTaGGTAGGCAGGCCAGCTCCG | + |
|
Preference number: 4 (lower is better) Translates to: GRPARGSVRGSPERRLKAASSPA*VGRPAP Trigger: CGGAGCTGGCCTGCCTACCCACGCCGGAGACGACGC...TGCCTTAAGTCGCCGCTCCGGACTCCCGCGGACTGAGCCCCGGGCGGGCCGGCC 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090821.10 ENSMUST00000090823.8 ENSMUST00000107217.6 ENSMUST00000168321.8 |
||
| CDS-3UTR TCA 90 bp | GCCGGCCCGCCCGGGGCTCAGTCCGCGGGAGTCCGGAGCGGCGACTTAAGGCAGGGACCCTGGCCTGGGTaGGGGGACCTTGTCCTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: AGPPGAQSAGVRSGDLRQGPWPG*GDLVLR Trigger: TCTGAGGACAAGGTCCCCTCACCCAGGCCAGGGTCC...CTGCCTTAAGTCGCCGCTCCGGACTCCCGCGGACTGAGCCCCGGGCGGGCCGGC 73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000090821.10 ENSMUST00000090823.8 ENSMUST00000107217.6 ENSMUST00000168321.8 |
||
| CDS-3UTR TCA 90 bp | GTCCGCGGGAGTCCGGAGCGGCGACTTAAGGCAGCGTGGCTGGAAGGGAGCGGGCCGCGCAGCTCGGGGTaGCCGCTTCCCACTGCACCG | + |
|
Preference number: 4 (lower is better) Translates to: VRGSPERRLKAAWLEGSGPRSSG*PLPTAP Trigger: CGGTGCAGTGGGAAGCGGTCACCCCGAGCTGCGCGG...CCCGCTCCCTTCCAGCCACGCTGCCTTAAGTCGCCGCTCCGGACTCCCGCGGAC 73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090821.10 ENSMUST00000090823.8 ENSMUST00000107217.6 ENSMUST00000168321.8 |
||
| CDS-3UTR TCA 90 bp | AGGAGGAGGCACGTCCCGGCCCCGGGAGGCCCGAGGACTCTACACAGCGCGCGGGGACCCTGGCCTGGGTaGGGGGACCTTGTCCTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: RRRHVPAPGGPRTLHSARGPWPG*GDLVLR Trigger: TCTGAGGACAAGGTCCCCTCACCCAGGCCAGGGTCC...CCGCGCGCTGTGTAGAGTCCTCGGGCCTCCCGGGGCCGGGACGTGCCTCCTCCT 72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000090821.10 ENSMUST00000090823.8 ENSMUST00000107217.6 ENSMUST00000168321.8 |
||
| CDS-3UTR CCA 90 bp | TGGGAAGCAGGGGGCTCCTACACAGTAGGAGGAGGCACGTCCCGGCCCCGGGAGGCAGCCAGGGGGCGGTaGCCTCACCAGCACTCGCGG | + |
|
Preference number: 4 (lower is better) Translates to: WEAGGSYTVGGGTSRPREAARGR*PHQHSR Trigger: CCGCGAGTGCTGGTGAGGCCACCGCCCCCTGGCTGC...CTCCCGGGGCCGGGACGTGCCTCCTCCTACTGTGTAGGAGCCCCCTGCTTCCCA 72% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 4 transcripts: ENSMUST00000090821.10 ENSMUST00000090823.8 ENSMUST00000107217.6 ENSMUST00000168321.8 |
||
| CDS-3UTR CCA 90 bp | GGCCGGCCCGCCCGGGGCTCAGTCCGCGGGAGTCCGGAGCGGCGACTTAAGGCAGCAGTTCCTCCAGCGTaGTCACCTCTACCGCCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: GRPARGSVRGSPERRLKAAVPPA*SPLPPA Trigger: GGCAGGCGGTAGAGGTGACCACGCTGGAGGAACTGC...TGCCTTAAGTCGCCGCTCCGGACTCCCGCGGACTGAGCCCCGGGCGGGCCGGCC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090821.10 ENSMUST00000090823.8 ENSMUST00000107217.6 ENSMUST00000168321.8 |
||
| CDS-3UTR CCA 90 bp | AGGAGGAGGCACGTCCCGGCCCCGGGAGGCCCGAGGACTCTACACAGCGCGCGGAGGCGAGGGGCGGCTTaGGCGACAGCGGAGACTTCA | + |
|
Preference number: 4 (lower is better) Translates to: RRRHVPAPGGPRTLHSARRRGAA*ATAETS Trigger: TGAAGTCTCCGCTGTCGCCCAAGCCGCCCCTCGCCT...CCGCGCGCTGTGTAGAGTCCTCGGGCCTCCCGGGGCCGGGACGTGCCTCCTCCT 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000090821.10 ENSMUST00000090823.8 ENSMUST00000107217.6 ENSMUST00000168321.8 |
||
| CDS-3UTR TCA 90 bp | AGGAGGAGGCACGTCCCGGCCCCGGGAGGCCCGAGGACTCTACACAGCGCGCGGAGAGTGAGGAGCGGTTaGTGGGTGGCGGGTGGCACA | + |
|
Preference number: 4 (lower is better) Translates to: RRRHVPAPGGPRTLHSARRVRSG*WVAGGT Trigger: TGTGCCACCCGCCACCCATCAACCGCTCCTCACTCT...CCGCGCGCTGTGTAGAGTCCTCGGGCCTCCCGGGGCCGGGACGTGCCTCCTCCT 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090821.10 ENSMUST00000090823.8 ENSMUST00000107217.6 ENSMUST00000168321.8 |
||
| CDS-3UTR TCA 90 bp | GCTCAGTCCGCGGGAGTCCGGAGCGGCGACTTAAGGCAGCGTGGCTGGAAGGGACCGCGCAGCTCGGGGTaGCCGCTTCCCACTGCACCG | + |
|
Preference number: 4 (lower is better) Translates to: AQSAGVRSGDLRQRGWKGPRSSG*PLPTAP Trigger: CGGTGCAGTGGGAAGCGGTCACCCCGAGCTGCGCGG...TCCCTTCCAGCCACGCTGCCTTAAGTCGCCGCTCCGGACTCCCGCGGACTGAGC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090821.10 ENSMUST00000090823.8 ENSMUST00000107217.6 ENSMUST00000168321.8 |
||
| CDS-3UTR TCA 90 bp | AGGAGGAGGCACGTCCCGGCCCCGGGAGGCCCGAGGACTCTACACAGCGCGCGGTCTCCAGGGCCAGACTaGCTCCCGGTCGCTCCATCT | + |
|
Preference number: 4 (lower is better) Translates to: RRRHVPAPGGPRTLHSARSPGPD*LPVAPS Trigger: AGATGGAGCGACCGGGAGTCAGTCTGGCCCTGGAGA...CCGCGCGCTGTGTAGAGTCCTCGGGCCTCCCGGGGCCGGGACGTGCCTCCTCCT 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090821.10 ENSMUST00000090823.8 ENSMUST00000107217.6 ENSMUST00000168321.8 |
||
| CDS-3UTR TCA 90 bp | GCACGTCCCGGCCCCGGGAGGCCCGAGGACTCTACACAGCGCGCGGCTCCAGCCAATGGATCGGGAGGCTaGGGCTGGGGAAAGGTCCCT | + |
|
Preference number: 4 (lower is better) Translates to: ARPGPGRPEDSTQRAAPANGSGG*GWGKVP Trigger: AGGGACCTTTCCCCAGCCTCAGCCTCCCGATCCATT...GGCTGGAGCCGCGCGCTGTGTAGAGTCCTCGGGCCTCCCGGGGCCGGGACGTGC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000090821.10 ENSMUST00000090823.8 ENSMUST00000107217.6 ENSMUST00000168321.8 |
||
| CDS-3UTR GCA 90 bp | GGCCGGCCCGCCCGGGGCTCAGTCCGCGGGAGTCCGGAGCGGCGACTTAAGGCAAGAGCGGAGCGGCCATaGAGGTTCACAGGCCCAGTT | + |
|
Preference number: 4 (lower is better) Translates to: GRPARGSVRGSPERRLKARAERP*RFTGPV Trigger: AACTGGGCCTGTGAACCTGCATGGCCGCTCCGCTCT...TGCCTTAAGTCGCCGCTCCGGACTCCCGCGGACTGAGCCCCGGGCGGGCCGGCC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090821.10 ENSMUST00000090823.8 ENSMUST00000107217.6 ENSMUST00000168321.8 |
||
| CDS-3UTR GCA 90 bp | TCAGTCCGCGGGAGTCCGGAGCGGCGACTTAAGGCAGCGTGGCTGGAAGGGAGCAGGGCAATCGGCGGCTaGCGCCGACACCCAGGCGCG | + |
|
Preference number: 4 (lower is better) Translates to: SVRGSPERRLKAAWLEGSRAIGG*RRHPGA Trigger: CGCGCCTGGGTGTCGGCGGCAGCCGCCGATTGCCCT...GCTCCCTTCCAGCCACGCTGCCTTAAGTCGCCGCTCCGGACTCCCGCGGACTGA 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000090821.10 ENSMUST00000090823.8 ENSMUST00000107217.6 ENSMUST00000168321.8 |
||
| CDS-3UTR CCA 90 bp | AGGAGGAGGCACGTCCCGGCCCCGGGAGGCCCGAGGACTCTACACAGCGCGCGGTGGGGAAAGGCAGCCTaGGCTTGGGGGAGCGATGAC | + |
|
Preference number: 4 (lower is better) Translates to: RRRHVPAPGGPRTLHSARWGKAA*AWGSDD Trigger: GTCATCGCTCCCCCAAGCCCAGGCTGCCTTTCCCCA...CCGCGCGCTGTGTAGAGTCCTCGGGCCTCCCGGGGCCGGGACGTGCCTCCTCCT 71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 6 transcripts: ENSMUST00000090821.10 ENSMUST00000090823.8 ENSMUST00000107217.6 ENSMUST00000142449.9 ENSMUST00000168321.8 ENSMUST00000204709.3 |
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| CDS-3UTR CCA 90 bp | GCCGGCCCGCCCGGGGCTCAGTCCGCGGGAGTCCGGAGCGGCGACTTAAGGCAGAGGTCAACAGAGGGGTaGGGTCCTGGGGAAAGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: AGPPGAQSAGVRSGDLRQRSTEG*GPGERQ Trigger: CTGCCTTTCCCCAGGACCCCACCCCTCTGTTGACCT...CTGCCTTAAGTCGCCGCTCCGGACTCCCGCGGACTGAGCCCCGGGCGGGCCGGC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 6 transcripts: ENSMUST00000090821.10 ENSMUST00000090823.8 ENSMUST00000107217.6 ENSMUST00000142449.9 ENSMUST00000168321.8 ENSMUST00000204709.3 |
||
| CDS-3UTR CCA 90 bp | GGCCCGCCCGGGGCTCAGTCCGCGGGAGTCCGGAGCGGCGACTTAAGGCAGCGTCCGTCCACAGCTACCTaGGTCAGCAGGGCCCTGCTA | + |
|
Preference number: 4 (lower is better) Translates to: GPPGAQSAGVRSGDLRQRPSTAT*VSRALL Trigger: TAGCAGGGCCCTGCTGACCCAGGTAGCTGTGGACGG...ACGCTGCCTTAAGTCGCCGCTCCGGACTCCCGCGGACTGAGCCCCGGGCGGGCC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090821.10 ENSMUST00000090823.8 ENSMUST00000107217.6 ENSMUST00000168321.8 |
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| CDS-3UTR CCA 90 bp | GGCCGGCCCGCCCGGGGCTCAGTCCGCGGGAGTCCGGAGCGGCGACTTAAGGCACCGGTCGCTCCATCTTaGCAGTCACCGTGCTCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: GRPARGSVRGSPERRLKAPVAPS*QSPCSV Trigger: CACAGAGCACGGTGACTGCCAAGATGGAGCGACCGG...TGCCTTAAGTCGCCGCTCCGGACTCCCGCGGACTGAGCCCCGGGCGGGCCGGCC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090821.10 ENSMUST00000090823.8 ENSMUST00000107217.6 ENSMUST00000168321.8 |
||
| CDS-3UTR CCA 90 bp | GCACGTCCCGGCCCCGGGAGGCCCGAGGACTCTACACAGCGCGCGGCTCCAGCCCCAGGAGGAGTGGGATaGGAATGGATCGGGAGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: ARPGPGRPEDSTQRAAPAPGGVG*EWIGRL Trigger: CAGCCTCCCGATCCATTCCCATCCCACTCCTCCTGG...GGCTGGAGCCGCGCGCTGTGTAGAGTCCTCGGGCCTCCCGGGGCCGGGACGTGC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000090821.10 ENSMUST00000090823.8 ENSMUST00000107217.6 ENSMUST00000168321.8 |
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| CDS-3UTR TCA 90 bp | GTCCGCGGGAGTCCGGAGCGGCGACTTAAGGCAGCGTGGCTGGAAGGGAGCGGGGGACCCTGGCCTGGGTaGGGGGACCTTGTCCTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: VRGSPERRLKAAWLEGSGGPWPG*GDLVLR Trigger: TCTGAGGACAAGGTCCCCTCACCCAGGCCAGGGTCC...CCCGCTCCCTTCCAGCCACGCTGCCTTAAGTCGCCGCTCCGGACTCCCGCGGAC 70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000090821.10 ENSMUST00000090823.8 ENSMUST00000107217.6 ENSMUST00000168321.8 |
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| CDS-3UTR TCA 90 bp | AGCAGGGGGCTCCTACACAGTAGGAGGAGGCACGTCCCGGCCCCGGGAGGCCCGGCCGGGCACACCGGCTaGGAGAGAGGTAGACGATAC | + |
|
Preference number: 4 (lower is better) Translates to: SRGLLHSRRRHVPAPGGPAGHTG*ERGRRY Trigger: GTATCGTCTACCTCTCTCTCAGCCGGTGTGCCCGGC...CGGGCCTCCCGGGGCCGGGACGTGCCTCCTCCTACTGTGTAGGAGCCCCCTGCT 70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000090821.10 ENSMUST00000090823.8 ENSMUST00000107217.6 ENSMUST00000168321.8 |
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| CDS-3UTR TCA 90 bp | AGCAGGGGGCTCCTACACAGTAGGAGGAGGCACGTCCCGGCCCCGGGAGGCCCGTCTCCAGGGCCAGACTaGCTCCCGGTCGCTCCATCT | + |
|
Preference number: 4 (lower is better) Translates to: SRGLLHSRRRHVPAPGGPSPGPD*LPVAPS Trigger: AGATGGAGCGACCGGGAGTCAGTCTGGCCCTGGAGA...CGGGCCTCCCGGGGCCGGGACGTGCCTCCTCCTACTGTGTAGGAGCCCCCTGCT 70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000090821.10 ENSMUST00000090823.8 ENSMUST00000107217.6 ENSMUST00000168321.8 |
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| CDS-3UTR GCA 90 bp | GCCGGCCCGCCCGGGGCTCAGTCCGCGGGAGTCCGGAGCGGCGACTTAAGGCAGGCTACCCTGGAAAACTaGACCCTCCCTAAGCGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: AGPPGAQSAGVRSGDLRQATLEN*TLPKRA Trigger: TGCCCGCTTAGGGAGGGTGCAGTTTTCCAGGGTAGC...CTGCCTTAAGTCGCCGCTCCGGACTCCCGCGGACTGAGCCCCGGGCGGGCCGGC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000090821.10 ENSMUST00000090823.8 ENSMUST00000107217.6 ENSMUST00000168321.8 |
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| CDS-3UTR GCA 90 bp | CTCCGGAGAGACTTGGGGGCCGAGCTGCAGTGGAGGCCGACTTTCAGGAGCACGAGGGCAATCGGCGGCTaGCGCCGACACCCAGGCGCG | + |
|
Preference number: 4 (lower is better) Translates to: LRRDLGAELQWRPTFRSTRAIGG*RRHPGA Trigger: CGCGCCTGGGTGTCGGCGGCAGCCGCCGATTGCCCT...CGTGCTCCTGAAAGTCGGCCTCCACTGCAGCTCGGCCCCCAAGTCTCTCCGGAG 70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000090821.10 ENSMUST00000090823.8 ENSMUST00000107217.6 ENSMUST00000168321.8 |
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| CDS-3UTR CCA 90 bp | AGGAGGAGGCACGTCCCGGCCCCGGGAGGCCCGAGGACTCTACACAGCGCGCGGAGGTCAACAGAGGGGTaGGGTCCTGGGGAAAGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: RRRHVPAPGGPRTLHSARRSTEG*GPGERQ Trigger: CTGCCTTTCCCCAGGACCCCACCCCTCTGTTGACCT...CCGCGCGCTGTGTAGAGTCCTCGGGCCTCCCGGGGCCGGGACGTGCCTCCTCCT 70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 6 transcripts: ENSMUST00000090821.10 ENSMUST00000090823.8 ENSMUST00000107217.6 ENSMUST00000142449.9 ENSMUST00000168321.8 ENSMUST00000204709.3 |
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| CDS-3UTR CCA 90 bp | GGCCCGCCCGGGGCTCAGTCCGCGGGAGTCCGGAGCGGCGACTTAAGGCAGCGTGGAGTGGGATGGGAATaGATCGGGAGGCTGAGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: GPPGAQSAGVRSGDLRQRGVGWE*IGRLRL Trigger: CAGCCTCAGCCTCCCGATCCATTCCCATCCCACTCC...ACGCTGCCTTAAGTCGCCGCTCCGGACTCCCGCGGACTGAGCCCCGGGCGGGCC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090821.10 ENSMUST00000090823.8 ENSMUST00000107217.6 ENSMUST00000168321.8 |
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| CDS-3UTR CCA 90 bp | GCTCAGTCCGCGGGAGTCCGGAGCGGCGACTTAAGGCAGCGTGGCTGGAAGGGAGCGTCGTCTCCGGCGTaGGTAGGCAGGCCAGCTCCG | + |
|
Preference number: 4 (lower is better) Translates to: AQSAGVRSGDLRQRGWKGASSPA*VGRPAP Trigger: CGGAGCTGGCCTGCCTACCCACGCCGGAGACGACGC...TCCCTTCCAGCCACGCTGCCTTAAGTCGCCGCTCCGGACTCCCGCGGACTGAGC 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000090821.10 ENSMUST00000090823.8 ENSMUST00000107217.6 ENSMUST00000168321.8 |
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| CDS-3UTR CCA 90 bp | GCCGGCCCGCCCGGGGCTCAGTCCGCGGGAGTCCGGAGCGGCGACTTAAGGCAGGCGTTGTTCCCATTCTaGTTCCATTCCCAGGGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: AGPPGAQSAGVRSGDLRQALFPF*FHSQGP Trigger: GGGCCCCTGGGAATGGAACCAGAATGGGAACAACGC...CTGCCTTAAGTCGCCGCTCCGGACTCCCGCGGACTGAGCCCCGGGCGGGCCGGC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000090821.10 ENSMUST00000090823.8 ENSMUST00000107217.6 ENSMUST00000168321.8 |
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| CDS-3UTR CCA 90 bp | CTCCCGCACCGCGAGGAAAGTCAGGCAGCGGCTTGGGGACACGGCTGTATTGGGGCAGCCAGGGGGCGGTaGCCTCACCAGCACTCGCGG | + |
|
Preference number: 4 (lower is better) Translates to: LPHREESQAAAWGHGCIGAARGR*PHQHSR Trigger: CCGCGAGTGCTGGTGAGGCCACCGCCCCCTGGCTGC...CCCAATACAGCCGTGTCCCCAAGCCGCTGCCTGACTTTCCTCGCGGTGCGGGAG 70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000090821.10 ENSMUST00000090823.8 ENSMUST00000107217.6 ENSMUST00000168321.8 |
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| CDS-3UTR TCA 90 bp | GGCCGACTTTCAGGAGCACGGTTACCCAGAGGGCCGGGCGCCGCGCCCTCCTTCAGAGTGAGGAGCGGTTaGTGGGTGGCGGGTGGCACA | + |
|
Preference number: 4 (lower is better) Translates to: GRLSGARLPRGPGAAPSFRVRSG*WVAGGT Trigger: TGTGCCACCCGCCACCCATCAACCGCTCCTCACTCT...GAAGGAGGGCGCGGCGCCCGGCCCTCTGGGTAACCGTGCTCCTGAAAGTCGGCC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000090821.10 ENSMUST00000090823.8 ENSMUST00000107217.6 ENSMUST00000168321.8 |
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| CDS-3UTR TCA 90 bp | CCGCGAGGAAAGTCAGGCAGCGGCTTGGGGACACGGCTGTATTGGGAAGCAGGGCCGCGCAGCTCGGGGTaGCCGCTTCCCACTGCACCG | + |
|
Preference number: 4 (lower is better) Translates to: PRGKSGSGLGTRLYWEAGPRSSG*PLPTAP Trigger: CGGTGCAGTGGGAAGCGGTCACCCCGAGCTGCGCGG...CCCTGCTTCCCAATACAGCCGTGTCCCCAAGCCGCTGCCTGACTTTCCTCGCGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000090821.10 ENSMUST00000090823.8 ENSMUST00000107217.6 ENSMUST00000168321.8 |
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| CDS-3UTR TCA 90 bp | GGCCCGCCCGGGGCTCAGTCCGCGGGAGTCCGGAGCGGCGACTTAAGGCAGCGTGCCACAAAAAGCCTGTaGCCCTCAGTGTCCAGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: GPPGAQSAGVRSGDLRQRATKSL*PSVSSS Trigger: GGAGCTGGACACTGAGGGTCACAGGCTTTTTGTGGC...ACGCTGCCTTAAGTCGCCGCTCCGGACTCCCGCGGACTGAGCCCCGGGCGGGCC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000090821.10 ENSMUST00000090823.8 ENSMUST00000107217.6 ENSMUST00000168321.8 |
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| CDS-3UTR TCA 90 bp | GGCCGACTTTCAGGAGCACGGTTACCCAGAGGGCCGGGCGCCGCGCCCTCCTTCTCTCCAGGGCCAGACTaGCTCCCGGTCGCTCCATCT | + |
|
Preference number: 4 (lower is better) Translates to: GRLSGARLPRGPGAAPSFSPGPD*LPVAPS Trigger: AGATGGAGCGACCGGGAGTCAGTCTGGCCCTGGAGA...GAAGGAGGGCGCGGCGCCCGGCCCTCTGGGTAACCGTGCTCCTGAAAGTCGGCC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000090821.10 ENSMUST00000090823.8 ENSMUST00000107217.6 ENSMUST00000168321.8 |
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| CDS-3UTR GCA 90 bp | GGCCCGCCCGGGGCTCAGTCCGCGGGAGTCCGGAGCGGCGACTTAAGGCAGCGTGCTACCCTGGAAAACTaGACCCTCCCTAAGCGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: GPPGAQSAGVRSGDLRQRATLEN*TLPKRA Trigger: TGCCCGCTTAGGGAGGGTGCAGTTTTCCAGGGTAGC...ACGCTGCCTTAAGTCGCCGCTCCGGACTCCCGCGGACTGAGCCCCGGGCGGGCC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000090821.10 ENSMUST00000090823.8 ENSMUST00000107217.6 ENSMUST00000168321.8 |
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| CDS-3UTR GCA 90 bp | AGGAGGAGGCACGTCCCGGCCCCGGGAGGCCCGAGGACTCTACACAGCGCGCGGGCTACCCTGGAAAACTaGACCCTCCCTAAGCGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: RRRHVPAPGGPRTLHSARATLEN*TLPKRA Trigger: TGCCCGCTTAGGGAGGGTGCAGTTTTCCAGGGTAGC...CCGCGCGCTGTGTAGAGTCCTCGGGCCTCCCGGGGCCGGGACGTGCCTCCTCCT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000090821.10 ENSMUST00000090823.8 ENSMUST00000107217.6 ENSMUST00000168321.8 |
||
| CDS-3UTR GCA 90 bp | TGGGAAGCAGGGGGCTCCTACACAGTAGGAGGAGGCACGTCCCGGCCCCGGGAGAGCTGCACCCACACCTaGACAGGACCCTGGCCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: WEAGGSYTVGGGTSRPRESCTHT*TGPWPG Trigger: CCCAGGCCAGGGTCCTGTGCAGGTGTGGGTGCAGCT...CTCCCGGGGCCGGGACGTGCCTCCTCCTACTGTGTAGGAGCCCCCTGCTTCCCA 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000090821.10 ENSMUST00000090823.8 ENSMUST00000107217.6 ENSMUST00000168321.8 |
||
| CDS-3UTR GCA 90 bp | GGAGCGGGGAGTGGGAGTCGGCCAGGTCCCCTGAAATGCTGGCGCTCCGAGGGGGCAGCTCCTCTGACATaGTCCATGCCGGGCACACCG | + |
|
Preference number: 4 (lower is better) Translates to: GAGSGSRPGPLKCWRSEGAAPLT*SMPGTP Trigger: CGGTGTGCCCGGCATGGAGCATGTCAGAGGAGCTGC...CCCCTCGGAGCGCCAGCATTTCAGGGGACCTGGCCGACTCCCACTCCCCGCTCC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000090821.10 ENSMUST00000090823.8 ENSMUST00000107217.6 ENSMUST00000168321.8 |
||
| CDS-3UTR CCA 90 bp | GTCCGCGGGAGTCCGGAGCGGCGACTTAAGGCAGCGTGGCTGGAAGGGAGCGGGTGGGGAAAGGCAGCCTaGGCTTGGGGGAGCGATGAC | + |
|
Preference number: 4 (lower is better) Translates to: VRGSPERRLKAAWLEGSGWGKAA*AWGSDD Trigger: GTCATCGCTCCCCCAAGCCCAGGCTGCCTTTCCCCA...CCCGCTCCCTTCCAGCCACGCTGCCTTAAGTCGCCGCTCCGGACTCCCGCGGAC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000090821.10 ENSMUST00000090823.8 ENSMUST00000107217.6 ENSMUST00000142449.9 ENSMUST00000168321.8 ENSMUST00000204709.3 |
||
| CDS-3UTR CCA 90 bp | GGCCGGCCCGCCCGGGGCTCAGTCCGCGGGAGTCCGGAGCGGCGACTTAAGGCAATGGCCACAGTGGACTaGGTGGCATCAAAGGGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: GRPARGSVRGSPERRLKAMATVD*VASKGH Trigger: ATGCCCCTTTGATGCCACCCAGTCCACTGTGGCCAT...TGCCTTAAGTCGCCGCTCCGGACTCCCGCGGACTGAGCCCCGGGCGGGCCGGCC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000090821.10 ENSMUST00000090823.8 ENSMUST00000107217.6 ENSMUST00000168321.8 |
||
| CDS-3UTR CCA 90 bp | CGCACCGCGAGGAAAGTCAGGCAGCGGCTTGGGGACACGGCTGTATTGGGAAGCGCAGCCAGGGGGCGGTaGCCTCACCAGCACTCGCGG | + |
|
Preference number: 4 (lower is better) Translates to: RTARKVRQRLGDTAVLGSAARGR*PHQHSR Trigger: CCGCGAGTGCTGGTGAGGCCACCGCCCCCTGGCTGC...GCTTCCCAATACAGCCGTGTCCCCAAGCCGCTGCCTGACTTTCCTCGCGGTGCG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000090821.10 ENSMUST00000090823.8 ENSMUST00000107217.6 ENSMUST00000168321.8 |
||
| CDS-3UTR CCA 90 bp | GCACGTCCCGGCCCCGGGAGGCCCGAGGACTCTACACAGCGCGCGGCTCCAGCCCCAAGAGTGGAAGACTaGGGCCCTTGTTGGGCATCA | + |
|
Preference number: 4 (lower is better) Translates to: ARPGPGRPEDSTQRAAPAPRVED*GPCWAS Trigger: TGATGCCCAACAAGGGCCCCAGTCTTCCACTCTTGG...GGCTGGAGCCGCGCGCTGTGTAGAGTCCTCGGGCCTCCCGGGGCCGGGACGTGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000090823.8 ENSMUST00000107217.6 ENSMUST00000168321.8 |
||
| CDS-3UTR CCA 90 bp | GGCCGGCCCGCCCGGGGCTCAGTCCGCGGGAGTCCGGAGCGGCGACTTAAGGCACCAAGAGTGGAAGACTaGGGCCCTTGTTGGGCATCA | + |
|
Preference number: 4 (lower is better) Translates to: GRPARGSVRGSPERRLKAPRVED*GPCWAS Trigger: TGATGCCCAACAAGGGCCCCAGTCTTCCACTCTTGG...TGCCTTAAGTCGCCGCTCCGGACTCCCGCGGACTGAGCCCCGGGCGGGCCGGCC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000090823.8 ENSMUST00000107217.6 ENSMUST00000168321.8 |
||
| CDS-3UTR CCA 90 bp | AGGAGGAGGCACGTCCCGGCCCCGGGAGGCCCGAGGACTCTACACAGCGCGCGGGTGGCTCTGCAAAGATaGCCACAGTGGACTGGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: RRRHVPAPGGPRTLHSARVALQR*PQWTGW Trigger: CCACCCAGTCCACTGTGGCCATCTTTGCAGAGCCAC...CCGCGCGCTGTGTAGAGTCCTCGGGCCTCCCGGGGCCGGGACGTGCCTCCTCCT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107217.6 |
||
| CDS-3UTR TCA 90 bp | GGCCGGCCCGCCCGGGGCTCAGTCCGCGGGAGTCCGGAGCGGCGACTTAAGGCAGATGGAGAGGCACCTTaGAGGTCAGAGGTCAACAGA | + |
|
Preference number: 4 (lower is better) Translates to: GRPARGSVRGSPERRLKADGEAP*RSEVNR Trigger: TCTGTTGACCTCTGACCTTCAAGGTGCCTCTCCATC...TGCCTTAAGTCGCCGCTCCGGACTCCCGCGGACTGAGCCCCGGGCGGGCCGGCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000090821.10 ENSMUST00000090823.8 ENSMUST00000107217.6 ENSMUST00000142449.9 ENSMUST00000168321.8 ENSMUST00000204709.3 |
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| CDS-3UTR TCA 90 bp | GCTCAGTCCGCGGGAGTCCGGAGCGGCGACTTAAGGCAGCGTGGCTGGAAGGGAGGACCCTGGCCTGGGTaGGGGGACCTTGTCCTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: AQSAGVRSGDLRQRGWKGGPWPG*GDLVLR Trigger: TCTGAGGACAAGGTCCCCTCACCCAGGCCAGGGTCC...TCCCTTCCAGCCACGCTGCCTTAAGTCGCCGCTCCGGACTCCCGCGGACTGAGC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000090821.10 ENSMUST00000090823.8 ENSMUST00000107217.6 ENSMUST00000168321.8 |
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| CDS-3UTR TCA 90 bp | TGGGAAGCAGGGGGCTCCTACACAGTAGGAGGAGGCACGTCCCGGCCCCGGGAGTCTCCAGGGCCAGACTaGCTCCCGGTCGCTCCATCT | + |
|
Preference number: 4 (lower is better) Translates to: WEAGGSYTVGGGTSRPRESPGPD*LPVAPS Trigger: AGATGGAGCGACCGGGAGTCAGTCTGGCCCTGGAGA...CTCCCGGGGCCGGGACGTGCCTCCTCCTACTGTGTAGGAGCCCCCTGCTTCCCA 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000090821.10 ENSMUST00000090823.8 ENSMUST00000107217.6 ENSMUST00000168321.8 |
||
| CDS-3UTR TCA 90 bp | GGAGCGGGGAGTGGGAGTCGGCCAGGTCCCCTGAAATGCTGGCGCTCCGAGGGGAATGGATCGGGAGGCTaGGGCTGGGGAAAGGTCCCT | + |
|
Preference number: 4 (lower is better) Translates to: GAGSGSRPGPLKCWRSEGNGSGG*GWGKVP Trigger: AGGGACCTTTCCCCAGCCTCAGCCTCCCGATCCATT...CCCCTCGGAGCGCCAGCATTTCAGGGGACCTGGCCGACTCCCACTCCCCGCTCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 4 transcripts: ENSMUST00000090821.10 ENSMUST00000090823.8 ENSMUST00000107217.6 ENSMUST00000168321.8 |
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| CDS-3UTR GCA 90 bp | GTCCGCGGGAGTCCGGAGCGGCGACTTAAGGCAGCGTGGCTGGAAGGGAGCGGGAGAGCGGAGCGGCCATaGAGGTTCACAGGCCCAGTT | + |
|
Preference number: 4 (lower is better) Translates to: VRGSPERRLKAAWLEGSGRAERP*RFTGPV Trigger: AACTGGGCCTGTGAACCTGCATGGCCGCTCCGCTCT...CCCGCTCCCTTCCAGCCACGCTGCCTTAAGTCGCCGCTCCGGACTCCCGCGGAC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000090821.10 ENSMUST00000090823.8 ENSMUST00000107217.6 ENSMUST00000168321.8 |
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| CDS-3UTR GCA 90 bp | TCAGTCCGCGGGAGTCCGGAGCGGCGACTTAAGGCAGCGTGGCTGGAAGGGAGCAGCTGCACCCACACCTaGACAGGACCCTGGCCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: SVRGSPERRLKAAWLEGSSCTHT*TGPWPG Trigger: CCCAGGCCAGGGTCCTGTGCAGGTGTGGGTGCAGCT...GCTCCCTTCCAGCCACGCTGCCTTAAGTCGCCGCTCCGGACTCCCGCGGACTGA 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000090821.10 ENSMUST00000090823.8 ENSMUST00000107217.6 ENSMUST00000168321.8 |
||
| CDS-3UTR GCA 90 bp | GCTCAGTCCGCGGGAGTCCGGAGCGGCGACTTAAGGCAGCGTGGCTGGAAGGGAGGGTCTCGATGTCCTTaGTCCGACGGCGGTTCGCGC | + |
|
Preference number: 4 (lower is better) Translates to: AQSAGVRSGDLRQRGWKGGSRCP*SDGGSR Trigger: GCGCGAACCGCCGTCGGAGCAAGGACATCGAGACCC...TCCCTTCCAGCCACGCTGCCTTAAGTCGCCGCTCCGGACTCCCGCGGACTGAGC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000090821.10 ENSMUST00000090823.8 ENSMUST00000107217.6 ENSMUST00000168321.8 |
||
| CDS-3UTR GCA 90 bp | CCAATTGCTCCGGAGAGACTTGGGGGCCGAGCTGCAGTGGAGGCCGACTTTCAGAGGGCAATCGGCGGCTaGCGCCGACACCCAGGCGCG | + |
|
Preference number: 4 (lower is better) Translates to: PIAPERLGGRAAVEADFQRAIGG*RRHPGA Trigger: CGCGCCTGGGTGTCGGCGGCAGCCGCCGATTGCCCT...CTGAAAGTCGGCCTCCACTGCAGCTCGGCCCCCAAGTCTCTCCGGAGCAATTGG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000090821.10 ENSMUST00000090823.8 ENSMUST00000107217.6 ENSMUST00000168321.8 |
||
| CDS-3UTR CCA 90 bp | CGGAGCGGCGACTTAAGGCAGCGTGGCTGGAAGGGAGCGGGGAGTGGGAGTCGGTGGGGAAAGGCAGCCTaGGCTTGGGGGAGCGATGAC | + |
|
Preference number: 4 (lower is better) Translates to: RSGDLRQRGWKGAGSGSRWGKAA*AWGSDD Trigger: GTCATCGCTCCCCCAAGCCCAGGCTGCCTTTCCCCA...CCGACTCCCACTCCCCGCTCCCTTCCAGCCACGCTGCCTTAAGTCGCCGCTCCG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 6 transcripts: ENSMUST00000090821.10 ENSMUST00000090823.8 ENSMUST00000107217.6 ENSMUST00000142449.9 ENSMUST00000168321.8 ENSMUST00000204709.3 |
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| CDS-3UTR CCA 90 bp | AGCAGGGGGCTCCTACACAGTAGGAGGAGGCACGTCCCGGCCCCGGGAGGCCCGAGGAAGGATGTCCAGTaGCGATCCAAGGCCCGAGGT | + |
|
Preference number: 4 (lower is better) Translates to: SRGLLHSRRRHVPAPGGPRKDVQ*RSKARG Trigger: ACCTCGGGCCTTGGATCGCCACTGGACATCCTTCCT...CGGGCCTCCCGGGGCCGGGACGTGCCTCCTCCTACTGTGTAGGAGCCCCCTGCT 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000090821.10 ENSMUST00000090823.8 ENSMUST00000107217.6 ENSMUST00000168321.8 |
||
| CDS-3UTR CCA 90 bp | GCCGGCCCGCCCGGGGCTCAGTCCGCGGGAGTCCGGAGCGGCGACTTAAGGCAGATGCCATCCACAGTATaGGTCCAGAGAAGCCAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: AGPPGAQSAGVRSGDLRQMPSTV*VQRSQA Trigger: TGCCTGGCTTCTCTGGACCCATACTGTGGATGGCAT...CTGCCTTAAGTCGCCGCTCCGGACTCCCGCGGACTGAGCCCCGGGCGGGCCGGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090821.10 ENSMUST00000090823.8 ENSMUST00000107217.6 ENSMUST00000168321.8 |
||
| CDS-3UTR CCA 90 bp | GGCCGGCCCGCCCGGGGCTCAGTCCGCGGGAGTCCGGAGCGGCGACTTAAGGCAAGTCACCGTGCTCTGTaGATTCCTGGTTCCCAGTCA | + |
|
Preference number: 4 (lower is better) Translates to: GRPARGSVRGSPERRLKASHRAL*IPGSQS Trigger: TGACTGGGAACCAGGAATCCACAGAGCACGGTGACT...TGCCTTAAGTCGCCGCTCCGGACTCCCGCGGACTGAGCCCCGGGCGGGCCGGCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090821.10 ENSMUST00000090823.8 ENSMUST00000107217.6 ENSMUST00000168321.8 |
||
| CDS-3UTR CCA 90 bp | AGCAGGGGGCTCCTACACAGTAGGAGGAGGCACGTCCCGGCCCCGGGAGGCCCGGCGTTGTTCCCATTCTaGTTCCATTCCCAGGGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: SRGLLHSRRRHVPAPGGPALFPF*FHSQGP Trigger: GGGCCCCTGGGAATGGAACCAGAATGGGAACAACGC...CGGGCCTCCCGGGGCCGGGACGTGCCTCCTCCTACTGTGTAGGAGCCCCCTGCT 68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000090821.10 ENSMUST00000090823.8 ENSMUST00000107217.6 ENSMUST00000168321.8 |
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| CDS-3UTR CCA 90 bp | TCAGTCCGCGGGAGTCCGGAGCGGCGACTTAAGGCAGCGTGGCTGGAAGGGAGCAGGCGAGGGGCGGCTTaGGCGACAGCGGAGACTTCA | + |
|
Preference number: 4 (lower is better) Translates to: SVRGSPERRLKAAWLEGSRRGAA*ATAETS Trigger: TGAAGTCTCCGCTGTCGCCCAAGCCGCCCCTCGCCT...GCTCCCTTCCAGCCACGCTGCCTTAAGTCGCCGCTCCGGACTCCCGCGGACTGA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090821.10 ENSMUST00000090823.8 ENSMUST00000107217.6 ENSMUST00000168321.8 |
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| 3UTR CAA 72 bp | GGGCGGAGGCAGGAAGGTAGTGTAGAGCTGGGGCGTTaGCGCTGCATCTCCATCCTTGGGCGGAGGCGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: GRRQEGSVELGR*RCISILGRRRG Trigger: CCCCCGCCTCCGCCCAAGGATGGAGATGCAGCGCAAACGCCCCAGCTCTACACTACCTTCCTGCCTCCGCCC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000142449.9 ENSMUST00000204709.3 |
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| CDS-3UTR TCA 90 bp | GCCGGCCCGCCCGGGGCTCAGTCCGCGGGAGTCCGGAGCGGCGACTTAAGGCAGAAGGTCAGGAATCTCTaGAAGTCCAGCCCAAGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: AGPPGAQSAGVRSGDLRQKVRNL*KSSPSS Trigger: GGAACTTGGGCTGGACTTTCAGAGATTCCTGACCTT...CTGCCTTAAGTCGCCGCTCCGGACTCCCGCGGACTGAGCCCCGGGCGGGCCGGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000090821.10 ENSMUST00000090823.8 ENSMUST00000107217.6 ENSMUST00000142449.9 ENSMUST00000168321.8 ENSMUST00000204709.3 |
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| CDS-3UTR TCA 90 bp | GGAGCGGGGAGTGGGAGTCGGCCAGGTCCCCTGAAATGCTGGCGCTCCGAGGGGATCCAAGGCCCGAGGTaGGCCACCCATGTCACGTTT | + |
|
Preference number: 4 (lower is better) Translates to: GAGSGSRPGPLKCWRSEGIQGPR*ATHVTF Trigger: AAACGTGACATGGGTGGCTCACCTCGGGCCTTGGAT...CCCCTCGGAGCGCCAGCATTTCAGGGGACCTGGCCGACTCCCACTCCCCGCTCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000090821.10 ENSMUST00000090823.8 ENSMUST00000107217.6 ENSMUST00000168321.8 |
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| CDS-3UTR TCA 90 bp | GGCCGACTTTCAGGAGCACGGTTACCCAGAGGGCCGGGCGCCGCGCCCTCCTTCATCCAAGGCCCGAGGTaGGCCACCCATGTCACGTTT | + |
|
Preference number: 4 (lower is better) Translates to: GRLSGARLPRGPGAAPSFIQGPR*ATHVTF Trigger: AAACGTGACATGGGTGGCTCACCTCGGGCCTTGGAT...GAAGGAGGGCGCGGCGCCCGGCCCTCTGGGTAACCGTGCTCCTGAAAGTCGGCC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000090821.10 ENSMUST00000090823.8 ENSMUST00000107217.6 ENSMUST00000168321.8 |
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| CDS-3UTR GCA 90 bp | CCCGGCACCCCCAATCAGTACCCACTGCTCTCCTGGGCCCCGGCTCAGCCCACAAGAGCGGAGCGGCCATaGAGGTTCACAGGCCCAGTT | + |
|
Preference number: 4 (lower is better) Translates to: PGTPNQYPLLSWAPAQPTRAERP*RFTGPV Trigger: AACTGGGCCTGTGAACCTGCATGGCCGCTCCGCTCT...TGTGGGCTGAGCCGGGGCCCAGGAGAGCAGTGGGTACTGATTGGGGGTGCCGGG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000090821.10 ENSMUST00000090823.8 ENSMUST00000107217.6 |
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| CDS-3UTR GCA 90 bp | GAGTGGGAGTCGGCCAGGTCCCCTGAAATGCTGGCGCTCCGAGGGGCGAGTTCCGCAGCTCCTCTGACATaGTCCATGCCGGGCACACCG | + |
|
Preference number: 4 (lower is better) Translates to: EWESARSPEMLALRGASSAAPLT*SMPGTP Trigger: CGGTGTGCCCGGCATGGAGCATGTCAGAGGAGCTGC...GGAACTCGCCCCTCGGAGCGCCAGCATTTCAGGGGACCTGGCCGACTCCCACTC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000090821.10 ENSMUST00000090823.8 ENSMUST00000107217.6 ENSMUST00000168321.8 |
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| CDS-3UTR GCA 90 bp | AGGAGGAGGCACGTCCCGGCCCCGGGAGGCCCGAGGACTCTACACAGCGCGCGGTCTTGGCAGTCACCGTaGTCTGTGGATTCCTGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: RRRHVPAPGGPRTLHSARSWQSP*SVDSWF Trigger: GAACCAGGAATCCACAGAGCACGGTGACTGCCAAGA...CCGCGCGCTGTGTAGAGTCCTCGGGCCTCCCGGGGCCGGGACGTGCCTCCTCCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090821.10 ENSMUST00000090823.8 ENSMUST00000107217.6 ENSMUST00000168321.8 |
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| CDS-3UTR GCA 90 bp | GACACGGCTGTATTGGGAAGCAGGGGGCTCCTACACAGTAGGAGGAGGCACGTCAGGGCAATCGGCGGCTaGCGCCGACACCCAGGCGCG | + |
|
Preference number: 4 (lower is better) Translates to: DTAVLGSRGLLHSRRRHVRAIGG*RRHPGA Trigger: CGCGCCTGGGTGTCGGCGGCAGCCGCCGATTGCCCT...GACGTGCCTCCTCCTACTGTGTAGGAGCCCCCTGCTTCCCAATACAGCCGTGTC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000090821.10 ENSMUST00000090823.8 ENSMUST00000107217.6 ENSMUST00000168321.8 |
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| CDS-3UTR CCA 90 bp | CGGAGCGGCGACTTAAGGCAGCGTGGCTGGAAGGGAGCGGGGAGTGGGAGTCGGAAGGCAGCCTGGGCTTaGGGGAGCGATGACAGCAAC | + |
|
Preference number: 4 (lower is better) Translates to: RSGDLRQRGWKGAGSGSRKAAWA*GSDDSN Trigger: GTTGCTGTCATCGCTCCCCCAAGCCCAGGCTGCCTT...CCGACTCCCACTCCCCGCTCCCTTCCAGCCACGCTGCCTTAAGTCGCCGCTCCG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000090821.10 ENSMUST00000090823.8 ENSMUST00000107217.6 ENSMUST00000142449.9 ENSMUST00000168321.8 ENSMUST00000204709.3 |
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| CDS-3UTR CCA 90 bp | TGGGAAGCAGGGGGCTCCTACACAGTAGGAGGAGGCACGTCCCGGCCCCGGGAGAGGTCAACAGAGGGGTaGGGTCCTGGGGAAAGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: WEAGGSYTVGGGTSRPRERSTEG*GPGERQ Trigger: CTGCCTTTCCCCAGGACCCCACCCCTCTGTTGACCT...CTCCCGGGGCCGGGACGTGCCTCCTCCTACTGTGTAGGAGCCCCCTGCTTCCCA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 6 transcripts: ENSMUST00000090821.10 ENSMUST00000090823.8 ENSMUST00000107217.6 ENSMUST00000142449.9 ENSMUST00000168321.8 ENSMUST00000204709.3 |
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| CDS-3UTR CCA 90 bp | GCTCAGTCCGCGGGAGTCCGGAGCGGCGACTTAAGGCAGCGTGGCTGGAAGGGACCGTCCACAGCTACCTaGGTCAGCAGGGCCCTGCTA | + |
|
Preference number: 4 (lower is better) Translates to: AQSAGVRSGDLRQRGWKGPSTAT*VSRALL Trigger: TAGCAGGGCCCTGCTGACCCAGGTAGCTGTGGACGG...TCCCTTCCAGCCACGCTGCCTTAAGTCGCCGCTCCGGACTCCCGCGGACTGAGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000090821.10 ENSMUST00000090823.8 ENSMUST00000107217.6 ENSMUST00000168321.8 |
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| CDS-3UTR CCA 90 bp | GCCGGCCCGCCCGGGGCTCAGTCCGCGGGAGTCCGGAGCGGCGACTTAAGGCAGACAGTAGTATTTCTGTaGGGACCAGCCATTCCGTCC | + |
|
Preference number: 4 (lower is better) Translates to: AGPPGAQSAGVRSGDLRQTVVFL*GPAIPS Trigger: GGACGGAATGGCTGGTCCCCACAGAAATACTACTGT...CTGCCTTAAGTCGCCGCTCCGGACTCCCGCGGACTGAGCCCCGGGCGGGCCGGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090821.10 ENSMUST00000090823.8 ENSMUST00000107217.6 ENSMUST00000168321.8 |
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| CDS-3UTR CCA 90 bp | TGGGAAGCAGGGGGCTCCTACACAGTAGGAGGAGGCACGTCCCGGCCCCGGGAGCCAGGAGGAGTGGGATaGGAATGGATCGGGAGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: WEAGGSYTVGGGTSRPREPGGVG*EWIGRL Trigger: CAGCCTCCCGATCCATTCCCATCCCACTCCTCCTGG...CTCCCGGGGCCGGGACGTGCCTCCTCCTACTGTGTAGGAGCCCCCTGCTTCCCA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000090821.10 ENSMUST00000090823.8 ENSMUST00000107217.6 ENSMUST00000168321.8 |
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| CDS-3UTR CCA 90 bp | CACCGCGAGGAAAGTCAGGCAGCGGCTTGGGGACACGGCTGTATTGGGAAGCAGGCGTCGTCTCCGGCGTaGGTAGGCAGGCCAGCTCCG | + |
|
Preference number: 4 (lower is better) Translates to: HREESQAAAWGHGCIGKQASSPA*VGRPAP Trigger: CGGAGCTGGCCTGCCTACCCACGCCGGAGACGACGC...CTGCTTCCCAATACAGCCGTGTCCCCAAGCCGCTGCCTGACTTTCCTCGCGGTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090821.10 ENSMUST00000090823.8 ENSMUST00000107217.6 ENSMUST00000168321.8 |
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| CDS-3UTR CCA 90 bp | GGCTTGGGGACACGGCTGTATTGGGAAGCAGGGGGCTCCTACACAGTAGGAGGAGCAGCCAGGGGGCGGTaGCCTCACCAGCACTCGCGG | + |
|
Preference number: 4 (lower is better) Translates to: GLGTRLYWEAGGSYTVGGAARGR*PHQHSR Trigger: CCGCGAGTGCTGGTGAGGCCACCGCCCCCTGGCTGC...TCCTCCTACTGTGTAGGAGCCCCCTGCTTCCCAATACAGCCGTGTCCCCAAGCC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 4 transcripts: ENSMUST00000090821.10 ENSMUST00000090823.8 ENSMUST00000107217.6 ENSMUST00000168321.8 |
||
| CDS-3UTR CCA 90 bp | CTCCGGAGAGACTTGGGGGCCGAGCTGCAGTGGAGGCCGACTTTCAGGAGCACGAGGCGAGGGGCGGCTTaGGCGACAGCGGAGACTTCA | + |
|
Preference number: 4 (lower is better) Translates to: LRRDLGAELQWRPTFRSTRRGAA*ATAETS Trigger: TGAAGTCTCCGCTGTCGCCCAAGCCGCCCCTCGCCT...CGTGCTCCTGAAAGTCGGCCTCCACTGCAGCTCGGCCCCCAAGTCTCTCCGGAG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000090821.10 ENSMUST00000090823.8 ENSMUST00000107217.6 ENSMUST00000168321.8 |
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| CDS-3UTR CCA 90 bp | GTCCGCGGGAGTCCGGAGCGGCGACTTAAGGCAGCGTGGCTGGAAGGGAGCGGGCTTGTTGGGCATCACTaGGGGAACTGGGGGTCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: VRGSPERRLKAAWLEGSGLVGHH*GNWGSQ Trigger: CTGAGACCCCCAGTTCCCCCAGTGATGCCCAACAAG...CCCGCTCCCTTCCAGCCACGCTGCCTTAAGTCGCCGCTCCGGACTCCCGCGGAC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000090823.8 ENSMUST00000107217.6 ENSMUST00000168321.8 |
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| CDS-3UTR CCA 90 bp | GGCCCGCCCGGGGCTCAGTCCGCGGGAGTCCGGAGCGGCGACTTAAGGCAGCGTTGTGAGCTCCAAGAGTaGAAGACTGGGGCCCTTGTT | + |
|
Preference number: 4 (lower is better) Translates to: GPPGAQSAGVRSGDLRQRCELQE*KTGALV Trigger: AACAAGGGCCCCAGTCTTCCACTCTTGGAGCTCACA...ACGCTGCCTTAAGTCGCCGCTCCGGACTCCCGCGGACTGAGCCCCGGGCGGGCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000090823.8 ENSMUST00000107217.6 ENSMUST00000168321.8 |
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| CDS-3UTR TCA 90 bp | AGGAGGAGGCACGTCCCGGCCCCGGGAGGCCCGAGGACTCTACACAGCGCGCGGAAGGTCAGGAATCTCTaGAAGTCCAGCCCAAGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: RRRHVPAPGGPRTLHSARKVRNL*KSSPSS Trigger: GGAACTTGGGCTGGACTTTCAGAGATTCCTGACCTT...CCGCGCGCTGTGTAGAGTCCTCGGGCCTCCCGGGGCCGGGACGTGCCTCCTCCT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000090821.10 ENSMUST00000090823.8 ENSMUST00000107217.6 ENSMUST00000142449.9 ENSMUST00000168321.8 ENSMUST00000204709.3 |
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| CDS-3UTR GCA 90 bp | AGCAGGGGGCTCCTACACAGTAGGAGGAGGCACGTCCCGGCCCCGGGAGGCCCGTCTTGGCAGTCACCGTaGTCTGTGGATTCCTGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: SRGLLHSRRRHVPAPGGPSWQSP*SVDSWF Trigger: GAACCAGGAATCCACAGAGCACGGTGACTGCCAAGA...CGGGCCTCCCGGGGCCGGGACGTGCCTCCTCCTACTGTGTAGGAGCCCCCTGCT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000090821.10 ENSMUST00000090823.8 ENSMUST00000107217.6 ENSMUST00000168321.8 |
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| CDS-3UTR GCA 90 bp | CGCACCGCGAGGAAAGTCAGGCAGCGGCTTGGGGACACGGCTGTATTGGGAAGCGGGTCTCGATGTCCTTaGTCCGACGGCGGTTCGCGC | + |
|
Preference number: 4 (lower is better) Translates to: RTARKVRQRLGDTAVLGSGSRCP*SDGGSR Trigger: GCGCGAACCGCCGTCGGAGCAAGGACATCGAGACCC...GCTTCCCAATACAGCCGTGTCCCCAAGCCGCTGCCTGACTTTCCTCGCGGTGCG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090821.10 ENSMUST00000090823.8 ENSMUST00000107217.6 ENSMUST00000168321.8 |
||
| CDS-3UTR GCA 90 bp | CCGCGAGGAAAGTCAGGCAGCGGCTTGGGGACACGGCTGTATTGGGAAGCAGGGGGGTCTCGATGTCCTTaGTCCGACGGCGGTTCGCGC | + |
|
Preference number: 4 (lower is better) Translates to: PRGKSGSGLGTRLYWEAGGSRCP*SDGGSR Trigger: GCGCGAACCGCCGTCGGAGCAAGGACATCGAGACCC...CCCTGCTTCCCAATACAGCCGTGTCCCCAAGCCGCTGCCTGACTTTCCTCGCGG 66% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000090821.10 ENSMUST00000090823.8 ENSMUST00000107217.6 ENSMUST00000168321.8 |
||
| CDS-3UTR GCA 90 bp | GGCTTGGGGACACGGCTGTATTGGGAAGCAGGGGGCTCCTACACAGTAGGAGGATCAGGACCGCCACCGTaGAGCCGGGCCAGGCTGCGA | + |
|
Preference number: 4 (lower is better) Translates to: GLGTRLYWEAGGSYTVGGSGPPP*SRARLR Trigger: TCGCAGCCTGGCCCGGCTGCACGGTGGCGGTCCTGA...TCCTCCTACTGTGTAGGAGCCCCCTGCTTCCCAATACAGCCGTGTCCCCAAGCC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000090821.10 ENSMUST00000090823.8 ENSMUST00000107217.6 ENSMUST00000168321.8 |
||
| CDS-3UTR GCA 90 bp | GACACGGCTGTATTGGGAAGCAGGGGGCTCCTACACAGTAGGAGGAGGCACGTCTCAGGACCGCCACCGTaGAGCCGGGCCAGGCTGCGA | + |
|
Preference number: 4 (lower is better) Translates to: DTAVLGSRGLLHSRRRHVSGPPP*SRARLR Trigger: TCGCAGCCTGGCCCGGCTGCACGGTGGCGGTCCTGA...GACGTGCCTCCTCCTACTGTGTAGGAGCCCCCTGCTTCCCAATACAGCCGTGTC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000090821.10 ENSMUST00000090823.8 ENSMUST00000107217.6 ENSMUST00000168321.8 |
||
| CDS-3UTR CCA 90 bp | GCTCAGTCCGCGGGAGTCCGGAGCGGCGACTTAAGGCAGCGTGGCTGGAAGGGAAAGGCAGCCTGGGCTTaGGGGAGCGATGACAGCAAC | + |
|
Preference number: 4 (lower is better) Translates to: AQSAGVRSGDLRQRGWKGKAAWA*GSDDSN Trigger: GTTGCTGTCATCGCTCCCCCAAGCCCAGGCTGCCTT...TCCCTTCCAGCCACGCTGCCTTAAGTCGCCGCTCCGGACTCCCGCGGACTGAGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000090821.10 ENSMUST00000090823.8 ENSMUST00000107217.6 ENSMUST00000142449.9 ENSMUST00000168321.8 ENSMUST00000204709.3 |
||
| CDS-3UTR CCA 90 bp | GAGTGGGAGTCGGCCAGGTCCCCTGAAATGCTGGCGCTCCGAGGGGCGAGTTCCAAGGCAGCCTGGGCTTaGGGGAGCGATGACAGCAAC | + |
|
Preference number: 4 (lower is better) Translates to: EWESARSPEMLALRGASSKAAWA*GSDDSN Trigger: GTTGCTGTCATCGCTCCCCCAAGCCCAGGCTGCCTT...GGAACTCGCCCCTCGGAGCGCCAGCATTTCAGGGGACCTGGCCGACTCCCACTC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 6 transcripts: ENSMUST00000090821.10 ENSMUST00000090823.8 ENSMUST00000107217.6 ENSMUST00000142449.9 ENSMUST00000168321.8 ENSMUST00000204709.3 |
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| CDS-3UTR CCA 90 bp | GCTCAGTCCGCGGGAGTCCGGAGCGGCGACTTAAGGCAGCGTGGCTGGAAGGGAAGGTCAACAGAGGGGTaGGGTCCTGGGGAAAGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: AQSAGVRSGDLRQRGWKGRSTEG*GPGERQ Trigger: CTGCCTTTCCCCAGGACCCCACCCCTCTGTTGACCT...TCCCTTCCAGCCACGCTGCCTTAAGTCGCCGCTCCGGACTCCCGCGGACTGAGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000090821.10 ENSMUST00000090823.8 ENSMUST00000107217.6 ENSMUST00000142449.9 ENSMUST00000168321.8 ENSMUST00000204709.3 |
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| CDS-3UTR CCA 90 bp | CGGAGCGGCGACTTAAGGCAGCGTGGCTGGAAGGGAGCGGGGAGTGGGAGTCGGTGCCCTCTGCAAAGATaGCCACAGTGGACTGGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: RSGDLRQRGWKGAGSGSRCPLQR*PQWTGW Trigger: CCACCCAGTCCACTGTGGCCATCTTTGCAGAGGGCA...CCGACTCCCACTCCCCGCTCCCTTCCAGCCACGCTGCCTTAAGTCGCCGCTCCG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000090821.10 ENSMUST00000090823.8 ENSMUST00000168321.8 |
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| CDS-3UTR CCA 90 bp | GCACGTCCCGGCCCCGGGAGGCCCGAGGACTCTACACAGCGCGCGGCTCCAGCCGCTCTCGAAGCCACTTaGAGTCATACTTTGCAGAAC | + |
|
Preference number: 4 (lower is better) Translates to: ARPGPGRPEDSTQRAAPAALEAT*SHTLQN Trigger: GTTCTGCAAAGTATGACTCCAAGTGGCTTCGAGAGC...GGCTGGAGCCGCGCGCTGTGTAGAGTCCTCGGGCCTCCCGGGGCCGGGACGTGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000090821.10 ENSMUST00000090823.8 ENSMUST00000168321.8 |
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| CDS-3UTR CCA 90 bp | GAGTGGGAGTCGGCCAGGTCCCCTGAAATGCTGGCGCTCCGAGGGGCGAGTTCCGGAGTGGGATGGGAATaGATCGGGAGGCTGAGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: EWESARSPEMLALRGASSGVGWE*IGRLRL Trigger: CAGCCTCAGCCTCCCGATCCATTCCCATCCCACTCC...GGAACTCGCCCCTCGGAGCGCCAGCATTTCAGGGGACCTGGCCGACTCCCACTC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000090821.10 ENSMUST00000090823.8 ENSMUST00000107217.6 ENSMUST00000168321.8 |
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| CDS-3UTR CCA 90 bp | GGCTTGGGGACACGGCTGTATTGGGAAGCAGGGGGCTCCTACACAGTAGGAGGAGCGTCGTCTCCGGCGTaGGTAGGCAGGCCAGCTCCG | + |
|
Preference number: 4 (lower is better) Translates to: GLGTRLYWEAGGSYTVGGASSPA*VGRPAP Trigger: CGGAGCTGGCCTGCCTACCCACGCCGGAGACGACGC...TCCTCCTACTGTGTAGGAGCCCCCTGCTTCCCAATACAGCCGTGTCCCCAAGCC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000090821.10 ENSMUST00000090823.8 ENSMUST00000107217.6 ENSMUST00000168321.8 |
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| CDS-3UTR CCA 90 bp | CCCGGCACCCCCAATCAGTACCCACTGCTCTCCTGGGCCCCGGCTCAGCCCACAGCGTTGTTCCCATTCTaGTTCCATTCCCAGGGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: PGTPNQYPLLSWAPAQPTALFPF*FHSQGP Trigger: GGGCCCCTGGGAATGGAACCAGAATGGGAACAACGC...TGTGGGCTGAGCCGGGGCCCAGGAGAGCAGTGGGTACTGATTGGGGGTGCCGGG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000090821.10 ENSMUST00000090823.8 ENSMUST00000107217.6 |
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| CDS-3UTR CCA 90 bp | CGCACCGCGAGGAAAGTCAGGCAGCGGCTTGGGGACACGGCTGTATTGGGAAGCAGGCGAGGGGCGGCTTaGGCGACAGCGGAGACTTCA | + |
|
Preference number: 4 (lower is better) Translates to: RTARKVRQRLGDTAVLGSRRGAA*ATAETS Trigger: TGAAGTCTCCGCTGTCGCCCAAGCCGCCCCTCGCCT...GCTTCCCAATACAGCCGTGTCCCCAAGCCGCTGCCTGACTTTCCTCGCGGTGCG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000090821.10 ENSMUST00000090823.8 ENSMUST00000107217.6 ENSMUST00000168321.8 |
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| CDS-3UTR CCA 90 bp | GTCCGCGGGAGTCCGGAGCGGCGACTTAAGGCAGCGTGGCTGGAAGGGAGCGGGCCAAGAGTGGAAGACTaGGGCCCTTGTTGGGCATCA | + |
|
Preference number: 4 (lower is better) Translates to: VRGSPERRLKAAWLEGSGPRVED*GPCWAS Trigger: TGATGCCCAACAAGGGCCCCAGTCTTCCACTCTTGG...CCCGCTCCCTTCCAGCCACGCTGCCTTAAGTCGCCGCTCCGGACTCCCGCGGAC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000090823.8 ENSMUST00000107217.6 ENSMUST00000168321.8 |
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| 3UTR CAA 72 bp | GGTCAGCAGGGCCCTGCTAGTCAGAGTGAGGAGCGGTaGATGGGTGGCGGGTGGCACAGCAGGATCCAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: GQQGPASQSEER*MGGGWHSRIQQ Trigger: CTGCTGGATCCTGCTGTGCCACCCGCCACCCATCAACCGCTCCTCACTCTGACTAGCAGGGCCCTGCTGACC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000142449.9 ENSMUST00000204709.3 |
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| CDS-3UTR TCA 90 bp | GGAGCGGGGAGTGGGAGTCGGCCAGGTCCCCTGAAATGCTGGCGCTCCGAGGGGGATGGAGAGGCACCTTaGAGGTCAGAGGTCAACAGA | + |
|
Preference number: 4 (lower is better) Translates to: GAGSGSRPGPLKCWRSEGDGEAP*RSEVNR Trigger: TCTGTTGACCTCTGACCTTCAAGGTGCCTCTCCATC...CCCCTCGGAGCGCCAGCATTTCAGGGGACCTGGCCGACTCCCACTCCCCGCTCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 6 transcripts: ENSMUST00000090821.10 ENSMUST00000090823.8 ENSMUST00000107217.6 ENSMUST00000142449.9 ENSMUST00000168321.8 ENSMUST00000204709.3 |
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| CDS-3UTR TCA 90 bp | GGAGCGGGGAGTGGGAGTCGGCCAGGTCCCCTGAAATGCTGGCGCTCCGAGGGGTCATCAGGTAGGTCTTaGGAGGAGGAGAACGAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: GAGSGSRPGPLKCWRSEGSSGRS*EEENEA Trigger: TGCCTCGTTCTCCTCCTCTCAAGACCTACCTGATGA...CCCCTCGGAGCGCCAGCATTTCAGGGGACCTGGCCGACTCCCACTCCCCGCTCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000090821.10 ENSMUST00000090823.8 ENSMUST00000107217.6 ENSMUST00000168321.8 |
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| CDS-3UTR TCA 90 bp | GAGTGGGAGTCGGCCAGGTCCCCTGAAATGCTGGCGCTCCGAGGGGCGAGTTCCGCCACAAAAAGCCTGTaGCCCTCAGTGTCCAGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: EWESARSPEMLALRGASSATKSL*PSVSSS Trigger: GGAGCTGGACACTGAGGGTCACAGGCTTTTTGTGGC...GGAACTCGCCCCTCGGAGCGCCAGCATTTCAGGGGACCTGGCCGACTCCCACTC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000090821.10 ENSMUST00000090823.8 ENSMUST00000107217.6 ENSMUST00000168321.8 |
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| CDS-3UTR TCA 90 bp | CCGCGAGGAAAGTCAGGCAGCGGCTTGGGGACACGGCTGTATTGGGAAGCAGGGGCCGGGCACACCGGCTaGGAGAGAGGTAGACGATAC | + |
|
Preference number: 4 (lower is better) Translates to: PRGKSGSGLGTRLYWEAGAGHTG*ERGRRY Trigger: GTATCGTCTACCTCTCTCTCAGCCGGTGTGCCCGGC...CCCTGCTTCCCAATACAGCCGTGTCCCCAAGCCGCTGCCTGACTTTCCTCGCGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000090821.10 ENSMUST00000090823.8 ENSMUST00000107217.6 ENSMUST00000168321.8 |
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| CDS-3UTR GCA 90 bp | GAGTGGGAGTCGGCCAGGTCCCCTGAAATGCTGGCGCTCCGAGGGGCGAGTTCCGCTACCCTGGAAAACTaGACCCTCCCTAAGCGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: EWESARSPEMLALRGASSATLEN*TLPKRA Trigger: TGCCCGCTTAGGGAGGGTGCAGTTTTCCAGGGTAGC...GGAACTCGCCCCTCGGAGCGCCAGCATTTCAGGGGACCTGGCCGACTCCCACTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000090821.10 ENSMUST00000090823.8 ENSMUST00000107217.6 ENSMUST00000168321.8 |
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| CDS-3UTR GCA 90 bp | CGGAGCGGCGACTTAAGGCAGCGTGGCTGGAAGGGAGCGGGGAGTGGGAGTCGGATCCAGCAGCGGGTGTaGCTTGATGAAGAGCAGGAC | + |
|
Preference number: 4 (lower is better) Translates to: RSGDLRQRGWKGAGSGSRIQQRV*LDEEQD Trigger: GTCCTGCTCTTCATCAAGGCACACCCGCTGCTGGAT...CCGACTCCCACTCCCCGCTCCCTTCCAGCCACGCTGCCTTAAGTCGCCGCTCCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090821.10 ENSMUST00000090823.8 ENSMUST00000107217.6 ENSMUST00000168321.8 |
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| CDS-3UTR GCA 90 bp | TGGGAAGCAGGGGGCTCCTACACAGTAGGAGGAGGCACGTCCCGGCCCCGGGAGCAGCCTCTGGATCGATaGCATCCACAGTATGGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: WEAGGSYTVGGGTSRPREQPLDR*HPQYGS Trigger: GGACCCATACTGTGGATGGCATCGATCCAGAGGCTG...CTCCCGGGGCCGGGACGTGCCTCCTCCTACTGTGTAGGAGCCCCCTGCTTCCCA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000090821.10 ENSMUST00000090823.8 ENSMUST00000107217.6 ENSMUST00000168321.8 |
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| CDS-3UTR GCA 90 bp | GGCCGACTTTCAGGAGCACGGTTACCCAGAGGGCCGGGCGCCGCGCCCTCCTTCTCTTGGCAGTCACCGTaGTCTGTGGATTCCTGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: GRLSGARLPRGPGAAPSFSWQSP*SVDSWF Trigger: GAACCAGGAATCCACAGAGCACGGTGACTGCCAAGA...GAAGGAGGGCGCGGCGCCCGGCCCTCTGGGTAACCGTGCTCCTGAAAGTCGGCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000090821.10 ENSMUST00000090823.8 ENSMUST00000107217.6 ENSMUST00000168321.8 |
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| CDS-3UTR CCA 90 bp | GAGTGGGAGTCGGCCAGGTCCCCTGAAATGCTGGCGCTCCGAGGGGCGAGTTCCCCACAGTGGACTGGGTaGCATCAAAGGGGCATCGAG | + |
|
Preference number: 4 (lower is better) Translates to: EWESARSPEMLALRGASSPQWTG*HQRGIE Trigger: CTCGATGCCCCTTTGATGCCACCCAGTCCACTGTGG...GGAACTCGCCCCTCGGAGCGCCAGCATTTCAGGGGACCTGGCCGACTCCCACTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 4 transcripts: ENSMUST00000090821.10 ENSMUST00000090823.8 ENSMUST00000107217.6 ENSMUST00000168321.8 |
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| CDS-3UTR CCA 90 bp | CGGAGCGGCGACTTAAGGCAGCGTGGCTGGAAGGGAGCGGGGAGTGGGAGTCGGATGGCCACAGTGGACTaGGTGGCATCAAAGGGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: RSGDLRQRGWKGAGSGSRMATVD*VASKGH Trigger: ATGCCCCTTTGATGCCACCCAGTCCACTGTGGCCAT...CCGACTCCCACTCCCCGCTCCCTTCCAGCCACGCTGCCTTAAGTCGCCGCTCCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000090821.10 ENSMUST00000090823.8 ENSMUST00000107217.6 ENSMUST00000168321.8 |
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| CDS-3UTR CCA 90 bp | TGGGAAGCAGGGGGCTCCTACACAGTAGGAGGAGGCACGTCCCGGCCCCGGGAGATGGCCACAGTGGACTaGGTGGCATCAAAGGGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: WEAGGSYTVGGGTSRPREMATVD*VASKGH Trigger: ATGCCCCTTTGATGCCACCCAGTCCACTGTGGCCAT...CTCCCGGGGCCGGGACGTGCCTCCTCCTACTGTGTAGGAGCCCCCTGCTTCCCA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000090821.10 ENSMUST00000090823.8 ENSMUST00000107217.6 ENSMUST00000168321.8 |
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| CDS-3UTR CCA 90 bp | GGAGCGGGGAGTGGGAGTCGGCCAGGTCCCCTGAAATGCTGGCGCTCCGAGGGGCAAAGATGGCCACAGTaGACTGGGTGGCATCAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: GAGSGSRPGPLKCWRSEGQRWPQ*TGWHQR Trigger: CCTTTGATGCCACCCAGTCCACTGTGGCCATCTTTG...CCCCTCGGAGCGCCAGCATTTCAGGGGACCTGGCCGACTCCCACTCCCCGCTCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000090821.10 ENSMUST00000090823.8 ENSMUST00000107217.6 ENSMUST00000168321.8 |
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| CDS-3UTR CCA 90 bp | CCCGCACCGCGAGGAAAGTCAGGCAGCGGCTTGGGGACACGGCTGTATTGGGAACCGTCCACAGCTACCTaGGTCAGCAGGGCCCTGCTA | + |
|
Preference number: 4 (lower is better) Translates to: PAPRGKSGSGLGTRLYWEPSTAT*VSRALL Trigger: TAGCAGGGCCCTGCTGACCCAGGTAGCTGTGGACGG...TTCCCAATACAGCCGTGTCCCCAAGCCGCTGCCTGACTTTCCTCGCGGTGCGGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090821.10 ENSMUST00000090823.8 ENSMUST00000107217.6 ENSMUST00000168321.8 |
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| CDS-3UTR CCA 90 bp | GGAGCGGGGAGTGGGAGTCGGCCAGGTCCCCTGAAATGCTGGCGCTCCGAGGGGGCACTGTCCCATCGTTaGAGCCAAGAAACAGGACAG | + |
|
Preference number: 4 (lower is better) Translates to: GAGSGSRPGPLKCWRSEGALSHR*SQETGQ Trigger: CTGTCCTGTTTCTTGGCTCCAACGATGGGACAGTGC...CCCCTCGGAGCGCCAGCATTTCAGGGGACCTGGCCGACTCCCACTCCCCGCTCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000090821.10 ENSMUST00000090823.8 ENSMUST00000107217.6 ENSMUST00000168321.8 |
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| CDS-3UTR CCA 90 bp | GGAGCGGGGAGTGGGAGTCGGCCAGGTCCCCTGAAATGCTGGCGCTCCGAGGGGTGTGAGCTCCAAGAGTaGAAGACTGGGGCCCTTGTT | + |
|
Preference number: 4 (lower is better) Translates to: GAGSGSRPGPLKCWRSEGCELQE*KTGALV Trigger: AACAAGGGCCCCAGTCTTCCACTCTTGGAGCTCACA...CCCCTCGGAGCGCCAGCATTTCAGGGGACCTGGCCGACTCCCACTCCCCGCTCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000090823.8 ENSMUST00000107217.6 ENSMUST00000168321.8 |
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| CDS-3UTR TCA 90 bp | AGACTTGGGGGCCGAGCTGCAGTGGAGGCCGACTTTCAGGAGCACGGTTACCCAAGAGTGAGGAGCGGTTaGTGGGTGGCGGGTGGCACA | + |
|
Preference number: 4 (lower is better) Translates to: RLGGRAAVEADFQEHGYPRVRSG*WVAGGT Trigger: TGTGCCACCCGCCACCCATCAACCGCTCCTCACTCT...TGGGTAACCGTGCTCCTGAAAGTCGGCCTCCACTGCAGCTCGGCCCCCAAGTCT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000090821.10 ENSMUST00000090823.8 ENSMUST00000107217.6 ENSMUST00000168321.8 |
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| CDS-3UTR TCA 90 bp | CCAATTGCTCCGGAGAGACTTGGGGGCCGAGCTGCAGTGGAGGCCGACTTTCAGGCCGGGCACACCGGCTaGGAGAGAGGTAGACGATAC | + |
|
Preference number: 4 (lower is better) Translates to: PIAPERLGGRAAVEADFQAGHTG*ERGRRY Trigger: GTATCGTCTACCTCTCTCTCAGCCGGTGTGCCCGGC...CTGAAAGTCGGCCTCCACTGCAGCTCGGCCCCCAAGTCTCTCCGGAGCAATTGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000090821.10 ENSMUST00000090823.8 ENSMUST00000107217.6 ENSMUST00000168321.8 |
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| CDS-3UTR TCA 90 bp | CCGCGAGGAAAGTCAGGCAGCGGCTTGGGGACACGGCTGTATTGGGAAGCAGGGAATGGATCGGGAGGCTaGGGCTGGGGAAAGGTCCCT | + |
|
Preference number: 4 (lower is better) Translates to: PRGKSGSGLGTRLYWEAGNGSGG*GWGKVP Trigger: AGGGACCTTTCCCCAGCCTCAGCCTCCCGATCCATT...CCCTGCTTCCCAATACAGCCGTGTCCCCAAGCCGCTGCCTGACTTTCCTCGCGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000090821.10 ENSMUST00000090823.8 ENSMUST00000107217.6 ENSMUST00000168321.8 |
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| CDS-3UTR GCA 90 bp | CACCGCGAGGAAAGTCAGGCAGCGGCTTGGGGACACGGCTGTATTGGGAAGCAGAAGGGGCATCGAGCCTaGCCACTCAGCTCCTCACCC | + |
|
Preference number: 4 (lower is better) Translates to: HREESQAAAWGHGCIGKQKGHRA*PLSSSP Trigger: GGGTGAGGAGCTGAGTGGGCAGGCTCGATGCCCCTT...CTGCTTCCCAATACAGCCGTGTCCCCAAGCCGCTGCCTGACTTTCCTCGCGGTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000090821.10 ENSMUST00000090823.8 ENSMUST00000107217.6 ENSMUST00000168321.8 |
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| CDS-3UTR GCA 90 bp | GGCCGACTTTCAGGAGCACGGTTACCCAGAGGGCCGGGCGCCGCGCCCTCCTTCGTACAAACTGCCCTCTaGAAAGATGGCCACAGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: GRLSGARLPRGPGAAPSFVQTAL*KDGHSG Trigger: TCCACTGTGGCCATCTTTGCAGAGGGCAGTTTGTAC...GAAGGAGGGCGCGGCGCCCGGCCCTCTGGGTAACCGTGCTCCTGAAAGTCGGCC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000090821.10 ENSMUST00000090823.8 ENSMUST00000168321.8 |
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| CDS-3UTR GCA 90 bp | GGAGCGGGGAGTGGGAGTCGGCCAGGTCCCCTGAAATGCTGGCGCTCCGAGGGGGTAGAAGGCGCAGACTaGAGACCCAGGAATGCTATT | + |
|
Preference number: 4 (lower is better) Translates to: GAGSGSRPGPLKCWRSEGVEGAD*RPRNAI Trigger: AATAGCATTCCTGGGTCTGCAGTCTGCGCCTTCTAC...CCCCTCGGAGCGCCAGCATTTCAGGGGACCTGGCCGACTCCCACTCCCCGCTCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000090821.10 ENSMUST00000090823.8 ENSMUST00000107217.6 ENSMUST00000168321.8 |
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| CDS-3UTR GCA 90 bp | CCCGGCACCCCCAATCAGTACCCACTGCTCTCCTGGGCCCCGGCTCAGCCCACACCATCCAGACTCCTCTaGTCCTTGAACTTGCCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: PGTPNQYPLLSWAPAQPTPSRLL*SLNLPS Trigger: TGAGGGCAAGTTCAAGGAGCAGAGGAGTCTGGATGG...TGTGGGCTGAGCCGGGGCCCAGGAGAGCAGTGGGTACTGATTGGGGGTGCCGGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000090821.10 ENSMUST00000090823.8 ENSMUST00000107217.6 |
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| CDS-3UTR GCA 90 bp | TTGGGGACACGGCTGTATTGGGAAGCAGGGGGCTCCTACACAGTAGGAGGAGGCAGCTGCACCCACACCTaGACAGGACCCTGGCCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: LGTRLYWEAGGSYTVGGGSCTHT*TGPWPG Trigger: CCCAGGCCAGGGTCCTGTGCAGGTGTGGGTGCAGCT...GCCTCCTCCTACTGTGTAGGAGCCCCCTGCTTCCCAATACAGCCGTGTCCCCAA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000090821.10 ENSMUST00000090823.8 ENSMUST00000107217.6 ENSMUST00000168321.8 |
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| CDS-3UTR GCA 90 bp | CACCGCGAGGAAAGTCAGGCAGCGGCTTGGGGACACGGCTGTATTGGGAAGCAGGCAGCTCCTCTGACATaGTCCATGCCGGGCACACCG | + |
|
Preference number: 4 (lower is better) Translates to: HREESQAAAWGHGCIGKQAAPLT*SMPGTP Trigger: CGGTGTGCCCGGCATGGAGCATGTCAGAGGAGCTGC...CTGCTTCCCAATACAGCCGTGTCCCCAAGCCGCTGCCTGACTTTCCTCGCGGTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090821.10 ENSMUST00000090823.8 ENSMUST00000107217.6 ENSMUST00000168321.8 |
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| CDS-3UTR GCA 90 bp | GGCTTGGGGACACGGCTGTATTGGGAAGCAGGGGGCTCCTACACAGTAGGAGGAGGGTCTCGATGTCCTTaGTCCGACGGCGGTTCGCGC | + |
|
Preference number: 4 (lower is better) Translates to: GLGTRLYWEAGGSYTVGGGSRCP*SDGGSR Trigger: GCGCGAACCGCCGTCGGAGCAAGGACATCGAGACCC...TCCTCCTACTGTGTAGGAGCCCCCTGCTTCCCAATACAGCCGTGTCCCCAAGCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000090821.10 ENSMUST00000090823.8 ENSMUST00000107217.6 ENSMUST00000168321.8 |
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| CDS-3UTR CCA 90 bp | TGGGAAGCAGGGGGCTCCTACACAGTAGGAGGAGGCACGTCCCGGCCCCGGGAGATGTCAGAAACTTGTTaGGCACCAGCCCCTCCCCTT | + |
|
Preference number: 4 (lower is better) Translates to: WEAGGSYTVGGGTSRPREMSETC*APAPPL Trigger: AAGGGGAGGGGCTGGTGCCCAACAAGTTTCTGACAT...CTCCCGGGGCCGGGACGTGCCTCCTCCTACTGTGTAGGAGCCCCCTGCTTCCCA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 6 transcripts: ENSMUST00000090821.10 ENSMUST00000090823.8 ENSMUST00000107217.6 ENSMUST00000142449.9 ENSMUST00000168321.8 ENSMUST00000204709.3 |
||
| CDS-3UTR CCA 90 bp | TGGGAAGCAGGGGGCTCCTACACAGTAGGAGGAGGCACGTCCCGGCCCCGGGAGCAAAGATGGCCACAGTaGACTGGGTGGCATCAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: WEAGGSYTVGGGTSRPREQRWPQ*TGWHQR Trigger: CCTTTGATGCCACCCAGTCCACTGTGGCCATCTTTG...CTCCCGGGGCCGGGACGTGCCTCCTCCTACTGTGTAGGAGCCCCCTGCTTCCCA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000090821.10 ENSMUST00000090823.8 ENSMUST00000107217.6 ENSMUST00000168321.8 |
||
| CDS-3UTR CCA 90 bp | CTCCCGCACCGCGAGGAAAGTCAGGCAGCGGCTTGGGGACACGGCTGTATTGGGTGCCCTCTGCAAAGATaGCCACAGTGGACTGGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: LPHREESQAAAWGHGCIGCPLQR*PQWTGW Trigger: CCACCCAGTCCACTGTGGCCATCTTTGCAGAGGGCA...CCCAATACAGCCGTGTCCCCAAGCCGCTGCCTGACTTTCCTCGCGGTGCGGGAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000090821.10 ENSMUST00000090823.8 ENSMUST00000168321.8 |
||
| CDS-3UTR CCA 90 bp | CTCCCGCACCGCGAGGAAAGTCAGGCAGCGGCTTGGGGACACGGCTGTATTGGGAGGAAGGATGTCCAGTaGCGATCCAAGGCCCGAGGT | + |
|
Preference number: 4 (lower is better) Translates to: LPHREESQAAAWGHGCIGRKDVQ*RSKARG Trigger: ACCTCGGGCCTTGGATCGCCACTGGACATCCTTCCT...CCCAATACAGCCGTGTCCCCAAGCCGCTGCCTGACTTTCCTCGCGGTGCGGGAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090821.10 ENSMUST00000090823.8 ENSMUST00000107217.6 ENSMUST00000168321.8 |
||
| CDS-3UTR CCA 90 bp | CTCCGGAGAGACTTGGGGGCCGAGCTGCAGTGGAGGCCGACTTTCAGGAGCACGAGGAAGGATGTCCAGTaGCGATCCAAGGCCCGAGGT | + |
|
Preference number: 4 (lower is better) Translates to: LRRDLGAELQWRPTFRSTRKDVQ*RSKARG Trigger: ACCTCGGGCCTTGGATCGCCACTGGACATCCTTCCT...CGTGCTCCTGAAAGTCGGCCTCCACTGCAGCTCGGCCCCCAAGTCTCTCCGGAG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000090821.10 ENSMUST00000090823.8 ENSMUST00000107217.6 ENSMUST00000168321.8 |
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| CDS-3UTR CCA 90 bp | CCCGCACCGCGAGGAAAGTCAGGCAGCGGCTTGGGGACACGGCTGTATTGGGAAGGAGTGGGATGGGAATaGATCGGGAGGCTGAGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: PAPRGKSGSGLGTRLYWEGVGWE*IGRLRL Trigger: CAGCCTCAGCCTCCCGATCCATTCCCATCCCACTCC...TTCCCAATACAGCCGTGTCCCCAAGCCGCTGCCTGACTTTCCTCGCGGTGCGGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090821.10 ENSMUST00000090823.8 ENSMUST00000107217.6 ENSMUST00000168321.8 |
||
| CDS-3UTR CCA 90 bp | CTCCGGAGAGACTTGGGGGCCGAGCTGCAGTGGAGGCCGACTTTCAGGAGCACGGCGTTGTTCCCATTCTaGTTCCATTCCCAGGGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: LRRDLGAELQWRPTFRSTALFPF*FHSQGP Trigger: GGGCCCCTGGGAATGGAACCAGAATGGGAACAACGC...CGTGCTCCTGAAAGTCGGCCTCCACTGCAGCTCGGCCCCCAAGTCTCTCCGGAG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000090821.10 ENSMUST00000090823.8 ENSMUST00000107217.6 ENSMUST00000168321.8 |
||
| CDS-3UTR TCA 90 bp | GAGTGGGAGTCGGCCAGGTCCCCTGAAATGCTGGCGCTCCGAGGGGCGAGTTCCGATGGAGAGGCACCTTaGAGGTCAGAGGTCAACAGA | + |
|
Preference number: 4 (lower is better) Translates to: EWESARSPEMLALRGASSDGEAP*RSEVNR Trigger: TCTGTTGACCTCTGACCTTCAAGGTGCCTCTCCATC...GGAACTCGCCCCTCGGAGCGCCAGCATTTCAGGGGACCTGGCCGACTCCCACTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000090821.10 ENSMUST00000090823.8 ENSMUST00000107217.6 ENSMUST00000142449.9 ENSMUST00000168321.8 ENSMUST00000204709.3 |
||
| CDS-3UTR TCA 90 bp | GTCCGCGGGAGTCCGGAGCGGCGACTTAAGGCAGCGTGGCTGGAAGGGAGCGGGGGAATGCTATTGGTCTaGGTAGTGAAGACCCCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: VRGSPERRLKAAWLEGSGGMLLV*VVKTPK Trigger: CTTTGGGGTCTTCACTACTCAGACCAATAGCATTCC...CCCGCTCCCTTCCAGCCACGCTGCCTTAAGTCGCCGCTCCGGACTCCCGCGGAC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000090821.10 ENSMUST00000090823.8 ENSMUST00000107217.6 ENSMUST00000168321.8 |
||
| CDS-3UTR TCA 90 bp | CGCACCGCGAGGAAAGTCAGGCAGCGGCTTGGGGACACGGCTGTATTGGGAAGCGCCACAAAAAGCCTGTaGCCCTCAGTGTCCAGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: RTARKVRQRLGDTAVLGSATKSL*PSVSSS Trigger: GGAGCTGGACACTGAGGGTCACAGGCTTTTTGTGGC...GCTTCCCAATACAGCCGTGTCCCCAAGCCGCTGCCTGACTTTCCTCGCGGTGCG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000090821.10 ENSMUST00000090823.8 ENSMUST00000107217.6 ENSMUST00000168321.8 |
||
| CDS-3UTR GCA 90 bp | GGCTTGGGGACACGGCTGTATTGGGAAGCAGGGGGCTCCTACACAGTAGGAGGAGCAGCTCCTCTGACATaGTCCATGCCGGGCACACCG | + |
|
Preference number: 4 (lower is better) Translates to: GLGTRLYWEAGGSYTVGGAAPLT*SMPGTP Trigger: CGGTGTGCCCGGCATGGAGCATGTCAGAGGAGCTGC...TCCTCCTACTGTGTAGGAGCCCCCTGCTTCCCAATACAGCCGTGTCCCCAAGCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000090821.10 ENSMUST00000090823.8 ENSMUST00000107217.6 ENSMUST00000168321.8 |
||
| CDS-3UTR GCA 90 bp | TGGGAAGCAGGGGGCTCCTACACAGTAGGAGGAGGCACGTCCCGGCCCCGGGAGGACAAAGTGTGGCTCTaGAAAGATGGCCACAGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: WEAGGSYTVGGGTSRPREDKVWL*KDGHSG Trigger: TCCACTGTGGCCATCTTTGCAGAGCCACACTTTGTC...CTCCCGGGGCCGGGACGTGCCTCCTCCTACTGTGTAGGAGCCCCCTGCTTCCCA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000107217.6 |
||
| CDS-3UTR CCA 90 bp | CGCACCGCGAGGAAAGTCAGGCAGCGGCTTGGGGACACGGCTGTATTGGGAAGCCCACAGTGGACTGGGTaGCATCAAAGGGGCATCGAG | + |
|
Preference number: 4 (lower is better) Translates to: RTARKVRQRLGDTAVLGSPQWTG*HQRGIE Trigger: CTCGATGCCCCTTTGATGCCACCCAGTCCACTGTGG...GCTTCCCAATACAGCCGTGTCCCCAAGCCGCTGCCTGACTTTCCTCGCGGTGCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000090821.10 ENSMUST00000090823.8 ENSMUST00000107217.6 ENSMUST00000168321.8 |
||
| CDS-3UTR CCA 90 bp | GAGTGGGAGTCGGCCAGGTCCCCTGAAATGCTGGCGCTCCGAGGGGCGAGTTCCCAAAGATGGCCACAGTaGACTGGGTGGCATCAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: EWESARSPEMLALRGASSQRWPQ*TGWHQR Trigger: CCTTTGATGCCACCCAGTCCACTGTGGCCATCTTTG...GGAACTCGCCCCTCGGAGCGCCAGCATTTCAGGGGACCTGGCCGACTCCCACTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000090821.10 ENSMUST00000090823.8 ENSMUST00000107217.6 ENSMUST00000168321.8 |
||
| CDS-3UTR CCA 90 bp | TGGGAAGCAGGGGGCTCCTACACAGTAGGAGGAGGCACGTCCCGGCCCCGGGAGACAGTAGTATTTCTGTaGGGACCAGCCATTCCGTCC | + |
|
Preference number: 4 (lower is better) Translates to: WEAGGSYTVGGGTSRPRETVVFL*GPAIPS Trigger: GGACGGAATGGCTGGTCCCCACAGAAATACTACTGT...CTCCCGGGGCCGGGACGTGCCTCCTCCTACTGTGTAGGAGCCCCCTGCTTCCCA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000090821.10 ENSMUST00000090823.8 ENSMUST00000107217.6 ENSMUST00000168321.8 |
||
| CDS-3UTR CCA 90 bp | GAGTGGGAGTCGGCCAGGTCCCCTGAAATGCTGGCGCTCCGAGGGGCGAGTTCCGCACTGTCCCATCGTTaGAGCCAAGAAACAGGACAG | + |
|
Preference number: 4 (lower is better) Translates to: EWESARSPEMLALRGASSALSHR*SQETGQ Trigger: CTGTCCTGTTTCTTGGCTCCAACGATGGGACAGTGC...GGAACTCGCCCCTCGGAGCGCCAGCATTTCAGGGGACCTGGCCGACTCCCACTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000090821.10 ENSMUST00000090823.8 ENSMUST00000107217.6 ENSMUST00000168321.8 |
||
| CDS-3UTR CCA 90 bp | GAGTGGGAGTCGGCCAGGTCCCCTGAAATGCTGGCGCTCCGAGGGGCGAGTTCCAGTCACCGTGCTCTGTaGATTCCTGGTTCCCAGTCA | + |
|
Preference number: 4 (lower is better) Translates to: EWESARSPEMLALRGASSSHRAL*IPGSQS Trigger: TGACTGGGAACCAGGAATCCACAGAGCACGGTGACT...GGAACTCGCCCCTCGGAGCGCCAGCATTTCAGGGGACCTGGCCGACTCCCACTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000090821.10 ENSMUST00000090823.8 ENSMUST00000107217.6 ENSMUST00000168321.8 |
||
| CDS-3UTR CCA 90 bp | CACCGCGAGGAAAGTCAGGCAGCGGCTTGGGGACACGGCTGTATTGGGAAGCAGCCGGTCGCTCCATCTTaGCAGTCACCGTGCTCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: HREESQAAAWGHGCIGKQPVAPS*QSPCSV Trigger: CACAGAGCACGGTGACTGCCAAGATGGAGCGACCGG...CTGCTTCCCAATACAGCCGTGTCCCCAAGCCGCTGCCTGACTTTCCTCGCGGTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090821.10 ENSMUST00000090823.8 ENSMUST00000107217.6 ENSMUST00000168321.8 |
||
| CDS-3UTR CCA 90 bp | CACCGCGAGGAAAGTCAGGCAGCGGCTTGGGGACACGGCTGTATTGGGAAGCAGCCAGGAGGAGTGGGATaGGAATGGATCGGGAGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: HREESQAAAWGHGCIGKQPGGVG*EWIGRL Trigger: CAGCCTCCCGATCCATTCCCATCCCACTCCTCCTGG...CTGCTTCCCAATACAGCCGTGTCCCCAAGCCGCTGCCTGACTTTCCTCGCGGTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090821.10 ENSMUST00000090823.8 ENSMUST00000107217.6 ENSMUST00000168321.8 |
||
| CDS-3UTR CCA 90 bp | GGCTTGGGGACACGGCTGTATTGGGAAGCAGGGGGCTCCTACACAGTAGGAGGAGCAGTTCCTCCAGCGTaGTCACCTCTACCGCCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: GLGTRLYWEAGGSYTVGGAVPPA*SPLPPA Trigger: GGCAGGCGGTAGAGGTGACCACGCTGGAGGAACTGC...TCCTCCTACTGTGTAGGAGCCCCCTGCTTCCCAATACAGCCGTGTCCCCAAGCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000090821.10 ENSMUST00000090823.8 ENSMUST00000107217.6 ENSMUST00000168321.8 |
||
| CDS-3UTR CCA 90 bp | CCCGCACCGCGAGGAAAGTCAGGCAGCGGCTTGGGGACACGGCTGTATTGGGAACTTGTTGGGCATCACTaGGGGAACTGGGGGTCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: PAPRGKSGSGLGTRLYWELVGHH*GNWGSQ Trigger: CTGAGACCCCCAGTTCCCCCAGTGATGCCCAACAAG...TTCCCAATACAGCCGTGTCCCCAAGCCGCTGCCTGACTTTCCTCGCGGTGCGGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000090823.8 ENSMUST00000107217.6 ENSMUST00000168321.8 |
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| CDS-3UTR TCA 90 bp | GTCCGCGGGAGTCCGGAGCGGCGACTTAAGGCAGCGTGGCTGGAAGGGAGCGGGCAGTTCTCCATATCTTaGCTCCTCCATGTCAGAAAC | + |
|
Preference number: 4 (lower is better) Translates to: VRGSPERRLKAAWLEGSGQFSIS*LLHVRN Trigger: GTTTCTGACATGGAGGAGTCAAGATATGGAGAACTG...CCCGCTCCCTTCCAGCCACGCTGCCTTAAGTCGCCGCTCCGGACTCCCGCGGAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000090821.10 ENSMUST00000090823.8 ENSMUST00000107217.6 ENSMUST00000142449.9 ENSMUST00000168321.8 ENSMUST00000204709.3 |
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| CDS-3UTR TCA 90 bp | GGCCGACTTTCAGGAGCACGGTTACCCAGAGGGCCGGGCGCCGCGCCCTCCTTCCAGTTCTCCATATCTTaGCTCCTCCATGTCAGAAAC | + |
|
Preference number: 4 (lower is better) Translates to: GRLSGARLPRGPGAAPSFQFSIS*LLHVRN Trigger: GTTTCTGACATGGAGGAGTCAAGATATGGAGAACTG...GAAGGAGGGCGCGGCGCCCGGCCCTCTGGGTAACCGTGCTCCTGAAAGTCGGCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000090821.10 ENSMUST00000090823.8 ENSMUST00000107217.6 ENSMUST00000142449.9 ENSMUST00000168321.8 |
||
| CDS-3UTR TCA 90 bp | TGGGAAGCAGGGGGCTCCTACACAGTAGGAGGAGGCACGTCCCGGCCCCGGGAGGGAATGCTATTGGTCTaGGTAGTGAAGACCCCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: WEAGGSYTVGGGTSRPREGMLLV*VVKTPK Trigger: CTTTGGGGTCTTCACTACTCAGACCAATAGCATTCC...CTCCCGGGGCCGGGACGTGCCTCCTCCTACTGTGTAGGAGCCCCCTGCTTCCCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000090821.10 ENSMUST00000090823.8 ENSMUST00000107217.6 ENSMUST00000168321.8 |
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| CDS-3UTR TCA 90 bp | CCCGGCACCCCCAATCAGTACCCACTGCTCTCCTGGGCCCCGGCTCAGCCCACAGGAATGCTATTGGTCTaGGTAGTGAAGACCCCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: PGTPNQYPLLSWAPAQPTGMLLV*VVKTPK Trigger: CTTTGGGGTCTTCACTACTCAGACCAATAGCATTCC...TGTGGGCTGAGCCGGGGCCCAGGAGAGCAGTGGGTACTGATTGGGGGTGCCGGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000090821.10 ENSMUST00000090823.8 ENSMUST00000107217.6 |
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| CDS-3UTR TCA 90 bp | CTCCCGCACCGCGAGGAAAGTCAGGCAGCGGCTTGGGGACACGGCTGTATTGGGTCATCAGGTAGGTCTTaGGAGGAGGAGAACGAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: LPHREESQAAAWGHGCIGSSGRS*EEENEA Trigger: TGCCTCGTTCTCCTCCTCTCAAGACCTACCTGATGA...CCCAATACAGCCGTGTCCCCAAGCCGCTGCCTGACTTTCCTCGCGGTGCGGGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090821.10 ENSMUST00000090823.8 ENSMUST00000107217.6 ENSMUST00000168321.8 |
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| CDS-3UTR TCA 90 bp | TTCCCTCTCCCACCCCAGAGTGTAGGCCGTGGAAAGGTGCCTGACCTCTATCCAAGAGTGAGGAGCGGTTaGTGGGTGGCGGGTGGCACA | + |
|
Preference number: 4 (lower is better) Translates to: FPLPPQSVGRGKVPDLYPRVRSG*WVAGGT Trigger: TGTGCCACCCGCCACCCATCAACCGCTCCTCACTCT...TGGATAGAGGTCAGGCACCTTTCCACGGCCTACACTCTGGGGTGGGAGAGGGAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000090821.10 ENSMUST00000090823.8 ENSMUST00000107217.6 |
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| CDS-3UTR TCA 90 bp | TGGCGCTCCGAGGGGCGAGTTCCTCGCCAAAGGACAGGGGAAAGACAAGTCAATGCCGGGCACACCGGCTaGGAGAGAGGTAGACGATAC | + |
|
Preference number: 4 (lower is better) Translates to: WRSEGRVPRQRTGERQVNAGHTG*ERGRRY Trigger: GTATCGTCTACCTCTCTCTCAGCCGGTGTGCCCGGC...ATTGACTTGTCTTTCCCCTGTCCTTTGGCGAGGAACTCGCCCCTCGGAGCGCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000090821.10 ENSMUST00000090823.8 ENSMUST00000107217.6 ENSMUST00000168321.8 |
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| CDS-3UTR TCA 90 bp | TTGGGGACACGGCTGTATTGGGAAGCAGGGGGCTCCTACACAGTAGGAGGAGGCAATGGATCGGGAGGCTaGGGCTGGGGAAAGGTCCCT | + |
|
Preference number: 4 (lower is better) Translates to: LGTRLYWEAGGSYTVGGGNGSGG*GWGKVP Trigger: AGGGACCTTTCCCCAGCCTCAGCCTCCCGATCCATT...GCCTCCTCCTACTGTGTAGGAGCCCCCTGCTTCCCAATACAGCCGTGTCCCCAA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000090821.10 ENSMUST00000090823.8 ENSMUST00000107217.6 ENSMUST00000168321.8 |
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| CDS-3UTR GCA 90 bp | TCAGTCCGCGGGAGTCCGGAGCGGCGACTTAAGGCAGCGTGGCTGGAAGGGAGCCAGGCAAGAAGTGTCTaGGAGTTCCAGGGAACAAGA | + |
|
Preference number: 4 (lower is better) Translates to: SVRGSPERRLKAAWLEGSQARSV*EFQGTR Trigger: TCTTGTTCCCTGGAACTCGCAGACACTTCTTGCCTG...GCTCCCTTCCAGCCACGCTGCCTTAAGTCGCCGCTCCGGACTCCCGCGGACTGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000090821.10 ENSMUST00000090823.8 ENSMUST00000107217.6 ENSMUST00000168321.8 |
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| CDS-3UTR GCA 90 bp | GCTCAGTCCGCGGGAGTCCGGAGCGGCGACTTAAGGCAGCGTGGCTGGAAGGGACAGGCAAGAAGTGTCTaGGAGTTCCAGGGAACAAGA | + |
|
Preference number: 4 (lower is better) Translates to: AQSAGVRSGDLRQRGWKGQARSV*EFQGTR Trigger: TCTTGTTCCCTGGAACTCGCAGACACTTCTTGCCTG...TCCCTTCCAGCCACGCTGCCTTAAGTCGCCGCTCCGGACTCCCGCGGACTGAGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000090821.10 ENSMUST00000090823.8 ENSMUST00000107217.6 ENSMUST00000168321.8 |
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| CDS-3UTR GCA 90 bp | TTGGGGACACGGCTGTATTGGGAAGCAGGGGGCTCCTACACAGTAGGAGGAGGCAGAGCGGAGCGGCCATaGAGGTTCACAGGCCCAGTT | + |
|
Preference number: 4 (lower is better) Translates to: LGTRLYWEAGGSYTVGGGRAERP*RFTGPV Trigger: AACTGGGCCTGTGAACCTGCATGGCCGCTCCGCTCT...GCCTCCTCCTACTGTGTAGGAGCCCCCTGCTTCCCAATACAGCCGTGTCCCCAA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000090821.10 ENSMUST00000090823.8 ENSMUST00000107217.6 ENSMUST00000168321.8 |
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| CDS-3UTR GCA 90 bp | CTCCCGCACCGCGAGGAAAGTCAGGCAGCGGCTTGGGGACACGGCTGTATTGGGCCATCCAGACTCCTCTaGTCCTTGAACTTGCCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: LPHREESQAAAWGHGCIGPSRLL*SLNLPS Trigger: TGAGGGCAAGTTCAAGGAGCAGAGGAGTCTGGATGG...CCCAATACAGCCGTGTCCCCAAGCCGCTGCCTGACTTTCCTCGCGGTGCGGGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090821.10 ENSMUST00000090823.8 ENSMUST00000107217.6 ENSMUST00000168321.8 |
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| CDS-3UTR GCA 90 bp | AGGAAACCTTTCCTGATTAACCCCGGTGGGACACCCGCCAAGCCAATTGCTCCGAGCTGCACCCACACCTaGACAGGACCCTGGCCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: RKPFLINPGGTPAKPIAPSCTHT*TGPWPG Trigger: CCCAGGCCAGGGTCCTGTGCAGGTGTGGGTGCAGCT...CGGAGCAATTGGCTTGGCGGGTGTCCCACCGGGGTTAATCAGGAAAGGTTTCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090821.10 ENSMUST00000090823.8 ENSMUST00000107217.6 ENSMUST00000168321.8 |
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| CDS-3UTR CCA 90 bp | TTGGGGACACGGCTGTATTGGGAAGCAGGGGGCTCCTACACAGTAGGAGGAGGCAAGGCAGCCTGGGCTTaGGGGAGCGATGACAGCAAC | + |
|
Preference number: 4 (lower is better) Translates to: LGTRLYWEAGGSYTVGGGKAAWA*GSDDSN Trigger: GTTGCTGTCATCGCTCCCCCAAGCCCAGGCTGCCTT...GCCTCCTCCTACTGTGTAGGAGCCCCCTGCTTCCCAATACAGCCGTGTCCCCAA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000090821.10 ENSMUST00000090823.8 ENSMUST00000107217.6 ENSMUST00000142449.9 ENSMUST00000168321.8 |
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| CDS-3UTR CCA 90 bp | TGGCGCTCCGAGGGGCGAGTTCCTCGCCAAAGGACAGGGGAAAGACAAGTCAATTGGGGAAAGGCAGCCTaGGCTTGGGGGAGCGATGAC | + |
|
Preference number: 4 (lower is better) Translates to: WRSEGRVPRQRTGERQVNWGKAA*AWGSDD Trigger: GTCATCGCTCCCCCAAGCCCAGGCTGCCTTTCCCCA...ATTGACTTGTCTTTCCCCTGTCCTTTGGCGAGGAACTCGCCCCTCGGAGCGCCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 6 transcripts: ENSMUST00000090821.10 ENSMUST00000090823.8 ENSMUST00000107217.6 ENSMUST00000142449.9 ENSMUST00000168321.8 ENSMUST00000204709.3 |
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| CDS-3UTR CCA 90 bp | AGACTTGGGGGCCGAGCTGCAGTGGAGGCCGACTTTCAGGAGCACGGTTACCCACCACAGTGGACTGGGTaGCATCAAAGGGGCATCGAG | + |
|
Preference number: 4 (lower is better) Translates to: RLGGRAAVEADFQEHGYPPQWTG*HQRGIE Trigger: CTCGATGCCCCTTTGATGCCACCCAGTCCACTGTGG...TGGGTAACCGTGCTCCTGAAAGTCGGCCTCCACTGCAGCTCGGCCCCCAAGTCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000090821.10 ENSMUST00000090823.8 ENSMUST00000107217.6 ENSMUST00000168321.8 |
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| CDS-3UTR CCA 90 bp | CCGCGAGGAAAGTCAGGCAGCGGCTTGGGGACACGGCTGTATTGGGAAGCAGGGATGGCCACAGTGGACTaGGTGGCATCAAAGGGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: PRGKSGSGLGTRLYWEAGMATVD*VASKGH Trigger: ATGCCCCTTTGATGCCACCCAGTCCACTGTGGCCAT...CCCTGCTTCCCAATACAGCCGTGTCCCCAAGCCGCTGCCTGACTTTCCTCGCGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000090821.10 ENSMUST00000090823.8 ENSMUST00000107217.6 ENSMUST00000168321.8 |
||
| CDS-3UTR CCA 90 bp | CTCCGGAGAGACTTGGGGGCCGAGCTGCAGTGGAGGCCGACTTTCAGGAGCACGCAAAGATGGCCACAGTaGACTGGGTGGCATCAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: LRRDLGAELQWRPTFRSTQRWPQ*TGWHQR Trigger: CCTTTGATGCCACCCAGTCCACTGTGGCCATCTTTG...CGTGCTCCTGAAAGTCGGCCTCCACTGCAGCTCGGCCCCCAAGTCTCTCCGGAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000090821.10 ENSMUST00000090823.8 ENSMUST00000107217.6 ENSMUST00000168321.8 |
||
| CDS-3UTR CCA 90 bp | CCAATTGCTCCGGAGAGACTTGGGGGCCGAGCTGCAGTGGAGGCCGACTTTCAGTGCCCTCTGCAAAGATaGCCACAGTGGACTGGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: PIAPERLGGRAAVEADFQCPLQR*PQWTGW Trigger: CCACCCAGTCCACTGTGGCCATCTTTGCAGAGGGCA...CTGAAAGTCGGCCTCCACTGCAGCTCGGCCCCCAAGTCTCTCCGGAGCAATTGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000090821.10 ENSMUST00000090823.8 ENSMUST00000168321.8 |
||
| CDS-3UTR CCA 90 bp | CCCTCCTTCCCCTCCCGCACCGCGAGGAAAGTCAGGCAGCGGCTTGGGGACACGGCTCTCGAAGCCACTTaGAGTCATACTTTGCAGAAC | + |
|
Preference number: 4 (lower is better) Translates to: PSFPSRTARKVRQRLGDTALEAT*SHTLQN Trigger: GTTCTGCAAAGTATGACTCCAAGTGGCTTCGAGAGC...CGTGTCCCCAAGCCGCTGCCTGACTTTCCTCGCGGTGCGGGAGGGGAAGGAGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000090821.10 ENSMUST00000090823.8 ENSMUST00000168321.8 |
||
| CDS-3UTR CCA 90 bp | GGCTTGGGGACACGGCTGTATTGGGAAGCAGGGGGCTCCTACACAGTAGGAGGACCGGTCGCTCCATCTTaGCAGTCACCGTGCTCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: GLGTRLYWEAGGSYTVGGPVAPS*QSPCSV Trigger: CACAGAGCACGGTGACTGCCAAGATGGAGCGACCGG...TCCTCCTACTGTGTAGGAGCCCCCTGCTTCCCAATACAGCCGTGTCCCCAAGCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000090821.10 ENSMUST00000090823.8 ENSMUST00000107217.6 ENSMUST00000168321.8 |
||
| CDS-3UTR CCA 90 bp | GACACGGCTGTATTGGGAAGCAGGGGGCTCCTACACAGTAGGAGGAGGCACGTCGGAGTGGGATGGGAATaGATCGGGAGGCTGAGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: DTAVLGSRGLLHSRRRHVGVGWE*IGRLRL Trigger: CAGCCTCAGCCTCCCGATCCATTCCCATCCCACTCC...GACGTGCCTCCTCCTACTGTGTAGGAGCCCCCTGCTTCCCAATACAGCCGTGTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000090821.10 ENSMUST00000090823.8 ENSMUST00000107217.6 ENSMUST00000168321.8 |
||
| CDS-3UTR CCA 90 bp | TTGGGGACACGGCTGTATTGGGAAGCAGGGGGCTCCTACACAGTAGGAGGAGGCCCAGGAGGAGTGGGATaGGAATGGATCGGGAGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: LGTRLYWEAGGSYTVGGGPGGVG*EWIGRL Trigger: CAGCCTCCCGATCCATTCCCATCCCACTCCTCCTGG...GCCTCCTCCTACTGTGTAGGAGCCCCCTGCTTCCCAATACAGCCGTGTCCCCAA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000090821.10 ENSMUST00000090823.8 ENSMUST00000107217.6 ENSMUST00000168321.8 |
||
| CDS-3UTR CCA 90 bp | GCCCCGGCTCAGCCCACACACACCAGGTCTTTGATTGCCTCCTTCAGGAAACCTGCAGTTCCTCCAGCGTaGTCACCTCTACCGCCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: APAQPTHTRSLIASFRKPAVPPA*SPLPPA Trigger: GGCAGGCGGTAGAGGTGACCACGCTGGAGGAACTGC...AGGTTTCCTGAAGGAGGCAATCAAAGACCTGGTGTGTGTGGGCTGAGCCGGGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000090821.10 ENSMUST00000090823.8 ENSMUST00000107217.6 |
||
| CDS-3UTR CCA 90 bp | TTCCCTCTCCCACCCCAGAGTGTAGGCCGTGGAAAGGTGCCTGACCTCTATCCAGCAGTTCCTCCAGCGTaGTCACCTCTACCGCCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: FPLPPQSVGRGKVPDLYPAVPPA*SPLPPA Trigger: GGCAGGCGGTAGAGGTGACCACGCTGGAGGAACTGC...TGGATAGAGGTCAGGCACCTTTCCACGGCCTACACTCTGGGGTGGGAGAGGGAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000090821.10 ENSMUST00000090823.8 ENSMUST00000107217.6 |
||
| CDS-3UTR CCA 90 bp | CCAATTGCTCCGGAGAGACTTGGGGGCCGAGCTGCAGTGGAGGCCGACTTTCAGCTTGTTGGGCATCACTaGGGGAACTGGGGGTCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: PIAPERLGGRAAVEADFQLVGHH*GNWGSQ Trigger: CTGAGACCCCCAGTTCCCCCAGTGATGCCCAACAAG...CTGAAAGTCGGCCTCCACTGCAGCTCGGCCCCCAAGTCTCTCCGGAGCAATTGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000090823.8 ENSMUST00000107217.6 ENSMUST00000168321.8 |
||
| 3UTR CAA 72 bp | AGGAAAGTCAGGCAGCGGCTTGGGGACACGGCTGTATaGGGAAGCAGGGGGCTCCTACACAGTAGGAGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: RKVRQRLGDTAV*GSRGLLHSRRR Trigger: CCTCCTCCTACTGTGTAGGAGCCCCCTGCTTCCCAATACAGCCGTGTCCCCAAGCCGCTGCCTGACTTTCCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000090821.10 ENSMUST00000090823.8 ENSMUST00000107217.6 ENSMUST00000142449.9 ENSMUST00000168321.8 |
||
| CDS-3UTR TCA 90 bp | TTGGGGACACGGCTGTATTGGGAAGCAGGGGGCTCCTACACAGTAGGAGGAGGCATCCAAGGCCCGAGGTaGGCCACCCATGTCACGTTT | + |
|
Preference number: 4 (lower is better) Translates to: LGTRLYWEAGGSYTVGGGIQGPR*ATHVTF Trigger: AAACGTGACATGGGTGGCTCACCTCGGGCCTTGGAT...GCCTCCTCCTACTGTGTAGGAGCCCCCTGCTTCCCAATACAGCCGTGTCCCCAA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000090821.10 ENSMUST00000090823.8 ENSMUST00000107217.6 ENSMUST00000168321.8 |
||
| CDS-3UTR TCA 90 bp | CGCACCGCGAGGAAAGTCAGGCAGCGGCTTGGGGACACGGCTGTATTGGGAAGCTCATCAGGTAGGTCTTaGGAGGAGGAGAACGAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: RTARKVRQRLGDTAVLGSSSGRS*EEENEA Trigger: TGCCTCGTTCTCCTCCTCTCAAGACCTACCTGATGA...GCTTCCCAATACAGCCGTGTCCCCAAGCCGCTGCCTGACTTTCCTCGCGGTGCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090821.10 ENSMUST00000090823.8 ENSMUST00000107217.6 ENSMUST00000168321.8 |
||
| CDS-3UTR TCA 90 bp | CCGCGAGGAAAGTCAGGCAGCGGCTTGGGGACACGGCTGTATTGGGAAGCAGGGTCATCAGGTAGGTCTTaGGAGGAGGAGAACGAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: PRGKSGSGLGTRLYWEAGSSGRS*EEENEA Trigger: TGCCTCGTTCTCCTCCTCTCAAGACCTACCTGATGA...CCCTGCTTCCCAATACAGCCGTGTCCCCAAGCCGCTGCCTGACTTTCCTCGCGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090821.10 ENSMUST00000090823.8 ENSMUST00000107217.6 ENSMUST00000168321.8 |
||
| CDS-3UTR GCA 90 bp | CTCCCGCACCGCGAGGAAAGTCAGGCAGCGGCTTGGGGACACGGCTGTATTGGGCTTGGAGTCATACTTTaGAGAACGGAGTGGAGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: LPHREESQAAAWGHGCIGLGVIL*RTEWRL Trigger: CAGCCTCCACTCCGTTCTGCAAAGTATGACTCCAAG...CCCAATACAGCCGTGTCCCCAAGCCGCTGCCTGACTTTCCTCGCGGTGCGGGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000090821.10 ENSMUST00000090823.8 ENSMUST00000168321.8 |
||
| CDS-3UTR GCA 90 bp | CCGCGAGGAAAGTCAGGCAGCGGCTTGGGGACACGGCTGTATTGGGAAGCAGGGTCTTGGCAGTCACCGTaGTCTGTGGATTCCTGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: PRGKSGSGLGTRLYWEAGSWQSP*SVDSWF Trigger: GAACCAGGAATCCACAGAGCACGGTGACTGCCAAGA...CCCTGCTTCCCAATACAGCCGTGTCCCCAAGCCGCTGCCTGACTTTCCTCGCGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090821.10 ENSMUST00000090823.8 ENSMUST00000107217.6 ENSMUST00000168321.8 |
||
| CDS-3UTR CCA 90 bp | GACCCCCTGGAGGTAGCACCTTCAGCACTGTCCCATCGTTGGAGCCAAGAAACATGGGGAAAGGCAGCCTaGGCTTGGGGGAGCGATGAC | + |
|
Preference number: 4 (lower is better) Translates to: DPLEVAPSALSHRWSQETWGKAA*AWGSDD Trigger: GTCATCGCTCCCCCAAGCCCAGGCTGCCTTTCCCCA...TGTTTCTTGGCTCCAACGATGGGACAGTGCTGAAGGTGCTACCTCCAGGGGGTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000142449.9 ENSMUST00000204709.3 |
||
| CDS-3UTR CCA 90 bp | GCCCCGGCTCAGCCCACACACACCAGGTCTTTGATTGCCTCCTTCAGGAAACCTAGGTCAACAGAGGGGTaGGGTCCTGGGGAAAGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: APAQPTHTRSLIASFRKPRSTEG*GPGERQ Trigger: CTGCCTTTCCCCAGGACCCCACCCCTCTGTTGACCT...AGGTTTCCTGAAGGAGGCAATCAAAGACCTGGTGTGTGTGGGCTGAGCCGGGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000090821.10 ENSMUST00000090823.8 ENSMUST00000107217.6 ENSMUST00000142449.9 |
||
| CDS-3UTR CCA 90 bp | CCCGCACCGCGAGGAAAGTCAGGCAGCGGCTTGGGGACACGGCTGTATTGGGAAATGTCAGAAACTTGTTaGGCACCAGCCCCTCCCCTT | + |
|
Preference number: 4 (lower is better) Translates to: PAPRGKSGSGLGTRLYWEMSETC*APAPPL Trigger: AAGGGGAGGGGCTGGTGCCCAACAAGTTTCTGACAT...TTCCCAATACAGCCGTGTCCCCAAGCCGCTGCCTGACTTTCCTCGCGGTGCGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000090821.10 ENSMUST00000090823.8 ENSMUST00000107217.6 ENSMUST00000142449.9 ENSMUST00000168321.8 |
||
| CDS-3UTR CCA 90 bp | GGCTTGGGGACACGGCTGTATTGGGAAGCAGGGGGCTCCTACACAGTAGGAGGACCACAGTGGACTGGGTaGCATCAAAGGGGCATCGAG | + |
|
Preference number: 4 (lower is better) Translates to: GLGTRLYWEAGGSYTVGGPQWTG*HQRGIE Trigger: CTCGATGCCCCTTTGATGCCACCCAGTCCACTGTGG...TCCTCCTACTGTGTAGGAGCCCCCTGCTTCCCAATACAGCCGTGTCCCCAAGCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000090821.10 ENSMUST00000090823.8 ENSMUST00000107217.6 ENSMUST00000168321.8 |
||
| CDS-3UTR CCA 90 bp | GAGTGGGAGTCGGCCAGGTCCCCTGAAATGCTGGCGCTCCGAGGGGCGAGTTCCGCTCTCGAAGCCACTTaGAGTCATACTTTGCAGAAC | + |
|
Preference number: 4 (lower is better) Translates to: EWESARSPEMLALRGASSALEAT*SHTLQN Trigger: GTTCTGCAAAGTATGACTCCAAGTGGCTTCGAGAGC...GGAACTCGCCCCTCGGAGCGCCAGCATTTCAGGGGACCTGGCCGACTCCCACTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000090821.10 ENSMUST00000090823.8 ENSMUST00000168321.8 |
||
| CDS-3UTR CCA 90 bp | TTGGGGACACGGCTGTATTGGGAAGCAGGGGGCTCCTACACAGTAGGAGGAGGCAGGAAGGATGTCCAGTaGCGATCCAAGGCCCGAGGT | + |
|
Preference number: 4 (lower is better) Translates to: LGTRLYWEAGGSYTVGGGRKDVQ*RSKARG Trigger: ACCTCGGGCCTTGGATCGCCACTGGACATCCTTCCT...GCCTCCTCCTACTGTGTAGGAGCCCCCTGCTTCCCAATACAGCCGTGTCCCCAA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000090821.10 ENSMUST00000090823.8 ENSMUST00000107217.6 ENSMUST00000168321.8 |
||
| CDS-3UTR CCA 90 bp | AGGAAACCTTTCCTGATTAACCCCGGTGGGACACCCGCCAAGCCAATTGCTCCGCCGTCCACAGCTACCTaGGTCAGCAGGGCCCTGCTA | + |
|
Preference number: 4 (lower is better) Translates to: RKPFLINPGGTPAKPIAPPSTAT*VSRALL Trigger: TAGCAGGGCCCTGCTGACCCAGGTAGCTGTGGACGG...CGGAGCAATTGGCTTGGCGGGTGTCCCACCGGGGTTAATCAGGAAAGGTTTCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090821.10 ENSMUST00000090823.8 ENSMUST00000107217.6 ENSMUST00000168321.8 |
||
| CDS-3UTR CCA 90 bp | CCGCGAGGAAAGTCAGGCAGCGGCTTGGGGACACGGCTGTATTGGGAAGCAGGGAGTCACCGTGCTCTGTaGATTCCTGGTTCCCAGTCA | + |
|
Preference number: 4 (lower is better) Translates to: PRGKSGSGLGTRLYWEAGSHRAL*IPGSQS Trigger: TGACTGGGAACCAGGAATCCACAGAGCACGGTGACT...CCCTGCTTCCCAATACAGCCGTGTCCCCAAGCCGCTGCCTGACTTTCCTCGCGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090821.10 ENSMUST00000090823.8 ENSMUST00000107217.6 ENSMUST00000168321.8 |
||
| CDS-3UTR CCA 90 bp | TTCCCTCTCCCACCCCAGAGTGTAGGCCGTGGAAAGGTGCCTGACCTCTATCCACCGGTCGCTCCATCTTaGCAGTCACCGTGCTCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: FPLPPQSVGRGKVPDLYPPVAPS*QSPCSV Trigger: CACAGAGCACGGTGACTGCCAAGATGGAGCGACCGG...TGGATAGAGGTCAGGCACCTTTCCACGGCCTACACTCTGGGGTGGGAGAGGGAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000090821.10 ENSMUST00000090823.8 ENSMUST00000107217.6 |
||
| CDS-3UTR TCA 90 bp | TTCCCTCTCCCACCCCAGAGTGTAGGCCGTGGAAAGGTGCCTGACCTCTATCCAATCCAAGGCCCGAGGTaGGCCACCCATGTCACGTTT | + |
|
Preference number: 4 (lower is better) Translates to: FPLPPQSVGRGKVPDLYPIQGPR*ATHVTF Trigger: AAACGTGACATGGGTGGCTCACCTCGGGCCTTGGAT...TGGATAGAGGTCAGGCACCTTTCCACGGCCTACACTCTGGGGTGGGAGAGGGAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000090821.10 ENSMUST00000090823.8 ENSMUST00000107217.6 |
||
| CDS-3UTR GCA 90 bp | GGCTTGGGGACACGGCTGTATTGGGAAGCAGGGGGCTCCTACACAGTAGGAGGACAGCCTCTGGATCGATaGCATCCACAGTATGGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: GLGTRLYWEAGGSYTVGGQPLDR*HPQYGS Trigger: GGACCCATACTGTGGATGGCATCGATCCAGAGGCTG...TCCTCCTACTGTGTAGGAGCCCCCTGCTTCCCAATACAGCCGTGTCCCCAAGCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000090821.10 ENSMUST00000090823.8 ENSMUST00000107217.6 ENSMUST00000168321.8 |
||
| CDS-3UTR GCA 90 bp | GACACGGCTGTATTGGGAAGCAGGGGGCTCCTACACAGTAGGAGGAGGCACGTCCAGCCTCTGGATCGATaGCATCCACAGTATGGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: DTAVLGSRGLLHSRRRHVQPLDR*HPQYGS Trigger: GGACCCATACTGTGGATGGCATCGATCCAGAGGCTG...GACGTGCCTCCTCCTACTGTGTAGGAGCCCCCTGCTTCCCAATACAGCCGTGTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000090821.10 ENSMUST00000090823.8 ENSMUST00000107217.6 ENSMUST00000168321.8 |
||
| CDS-3UTR GCA 90 bp | AATTGCTCCGGAGAGACTTGGGGGCCGAGCTGCAGTGGAGGCCGACTTTCAGGACAGCCTCTGGATCGATaGCATCCACAGTATGGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: NCSGETWGPSCSGGRLSGQPLDR*HPQYGS Trigger: GGACCCATACTGTGGATGGCATCGATCCAGAGGCTG...TCCTGAAAGTCGGCCTCCACTGCAGCTCGGCCCCCAAGTCTCTCCGGAGCAATT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000090821.10 ENSMUST00000090823.8 ENSMUST00000107217.6 ENSMUST00000168321.8 |
||
| CDS-3UTR CCA 90 bp | AGGGCCAGACTGACTCCCGGTCGCTCCATCTTGGCAGTCACCGTGCTCTGTGGAATGTCAGAAACTTGTTaGGCACCAGCCCCTCCCCTT | + |
|
Preference number: 4 (lower is better) Translates to: RARLTPGRSILAVTVLCGMSETC*APAPPL Trigger: AAGGGGAGGGGCTGGTGCCCAACAAGTTTCTGACAT...TCCACAGAGCACGGTGACTGCCAAGATGGAGCGACCGGGAGTCAGTCTGGCCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000142449.9 ENSMUST00000204709.3 |
||
| CDS-3UTR CCA 90 bp | CACCGCGAGGAAAGTCAGGCAGCGGCTTGGGGACACGGCTGTATTGGGAAGCAGGCACTGTCCCATCGTTaGAGCCAAGAAACAGGACAG | + |
|
Preference number: 4 (lower is better) Translates to: HREESQAAAWGHGCIGKQALSHR*SQETGQ Trigger: CTGTCCTGTTTCTTGGCTCCAACGATGGGACAGTGC...CTGCTTCCCAATACAGCCGTGTCCCCAAGCCGCTGCCTGACTTTCCTCGCGGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090821.10 ENSMUST00000090823.8 ENSMUST00000107217.6 ENSMUST00000168321.8 |
||
| CDS-3UTR CCA 90 bp | AGACTTGGGGGCCGAGCTGCAGTGGAGGCCGACTTTCAGGAGCACGGTTACCCATGTGAGCTCCAAGAGTaGAAGACTGGGGCCCTTGTT | + |
|
Preference number: 4 (lower is better) Translates to: RLGGRAAVEADFQEHGYPCELQE*KTGALV Trigger: AACAAGGGCCCCAGTCTTCCACTCTTGGAGCTCACA...TGGGTAACCGTGCTCCTGAAAGTCGGCCTCCACTGCAGCTCGGCCCCCAAGTCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000090823.8 ENSMUST00000107217.6 ENSMUST00000168321.8 |
||
| CDS-3UTR TCA 90 bp | CTCCGGAGAGACTTGGGGGCCGAGCTGCAGTGGAGGCCGACTTTCAGGAGCACGCAGTTCTCCATATCTTaGCTCCTCCATGTCAGAAAC | + |
|
Preference number: 4 (lower is better) Translates to: LRRDLGAELQWRPTFRSTQFSIS*LLHVRN Trigger: GTTTCTGACATGGAGGAGTCAAGATATGGAGAACTG...CGTGCTCCTGAAAGTCGGCCTCCACTGCAGCTCGGCCCCCAAGTCTCTCCGGAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000090821.10 ENSMUST00000090823.8 ENSMUST00000107217.6 ENSMUST00000142449.9 ENSMUST00000168321.8 |
||
| CDS-3UTR TCA 90 bp | AGGAAACCTTTCCTGATTAACCCCGGTGGGACACCCGCCAAGCCAATTGCTCCGGCCACAAAAAGCCTGTaGCCCTCAGTGTCCAGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: RKPFLINPGGTPAKPIAPATKSL*PSVSSS Trigger: GGAGCTGGACACTGAGGGTCACAGGCTTTTTGTGGC...CGGAGCAATTGGCTTGGCGGGTGTCCCACCGGGGTTAATCAGGAAAGGTTTCCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000090821.10 ENSMUST00000090823.8 ENSMUST00000107217.6 ENSMUST00000168321.8 |
||
| CDS-3UTR GCA 90 bp | AGACTTGGGGGCCGAGCTGCAGTGGAGGCCGACTTTCAGGAGCACGGTTACCCAGTACAAACTGCCCTCTaGAAAGATGGCCACAGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: RLGGRAAVEADFQEHGYPVQTAL*KDGHSG Trigger: TCCACTGTGGCCATCTTTGCAGAGGGCAGTTTGTAC...TGGGTAACCGTGCTCCTGAAAGTCGGCCTCCACTGCAGCTCGGCCCCCAAGTCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000090821.10 ENSMUST00000090823.8 ENSMUST00000168321.8 |
||
| CDS-3UTR GCA 90 bp | CACCGCGAGGAAAGTCAGGCAGCGGCTTGGGGACACGGCTGTATTGGGAAGCAGGTAGAAGGCGCAGACTaGAGACCCAGGAATGCTATT | + |
|
Preference number: 4 (lower is better) Translates to: HREESQAAAWGHGCIGKQVEGAD*RPRNAI Trigger: AATAGCATTCCTGGGTCTGCAGTCTGCGCCTTCTAC...CTGCTTCCCAATACAGCCGTGTCCCCAAGCCGCTGCCTGACTTTCCTCGCGGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090821.10 ENSMUST00000090823.8 ENSMUST00000107217.6 ENSMUST00000168321.8 |
||
| CDS-3UTR GCA 90 bp | GACACGGCTGTATTGGGAAGCAGGGGGCTCCTACACAGTAGGAGGAGGCACGTCCCATCCAGACTCCTCTaGTCCTTGAACTTGCCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: DTAVLGSRGLLHSRRRHVPSRLL*SLNLPS Trigger: TGAGGGCAAGTTCAAGGAGCAGAGGAGTCTGGATGG...GACGTGCCTCCTCCTACTGTGTAGGAGCCCCCTGCTTCCCAATACAGCCGTGTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000090821.10 ENSMUST00000090823.8 ENSMUST00000107217.6 ENSMUST00000168321.8 |
||
| CDS-3UTR GCA 90 bp | TTCCCTCTCCCACCCCAGAGTGTAGGCCGTGGAAAGGTGCCTGACCTCTATCCAATCCAGCAGCGGGTGTaGCTTGATGAAGAGCAGGAC | + |
|
Preference number: 4 (lower is better) Translates to: FPLPPQSVGRGKVPDLYPIQQRV*LDEEQD Trigger: GTCCTGCTCTTCATCAAGGCACACCCGCTGCTGGAT...TGGATAGAGGTCAGGCACCTTTCCACGGCCTACACTCTGGGGTGGGAGAGGGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000090821.10 ENSMUST00000090823.8 ENSMUST00000107217.6 |
||
| CDS-3UTR GCA 90 bp | TGGCGCTCCGAGGGGCGAGTTCCTCGCCAAAGGACAGGGGAAAGACAAGTCAATATCCAGCAGCGGGTGTaGCTTGATGAAGAGCAGGAC | + |
|
Preference number: 4 (lower is better) Translates to: WRSEGRVPRQRTGERQVNIQQRV*LDEEQD Trigger: GTCCTGCTCTTCATCAAGGCACACCCGCTGCTGGAT...ATTGACTTGTCTTTCCCCTGTCCTTTGGCGAGGAACTCGCCCCTCGGAGCGCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000090821.10 ENSMUST00000090823.8 ENSMUST00000107217.6 ENSMUST00000168321.8 |
||
| CDS-3UTR CCA 90 bp | AGTCAGATCGACATCAGTCCCACCAGGTCCCCTGATACTCATGCAGCCTCTGGAAGGTCAACAGAGGGGTaGGGTCCTGGGGAAAGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: SQIDISPTRSPDTHAASGRSTEG*GPGERQ Trigger: CTGCCTTTCCCCAGGACCCCACCCCTCTGTTGACCT...TCCAGAGGCTGCATGAGTATCAGGGGACCTGGTGGGACTGATGTCGATCTGACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000142449.9 ENSMUST00000204709.3 |
||
| CDS-3UTR CCA 90 bp | TTGGGGACACGGCTGTATTGGGAAGCAGGGGGCTCCTACACAGTAGGAGGAGGCATGTCAGAAACTTGTTaGGCACCAGCCCCTCCCCTT | + |
|
Preference number: 4 (lower is better) Translates to: LGTRLYWEAGGSYTVGGGMSETC*APAPPL Trigger: AAGGGGAGGGGCTGGTGCCCAACAAGTTTCTGACAT...GCCTCCTCCTACTGTGTAGGAGCCCCCTGCTTCCCAATACAGCCGTGTCCCCAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 5 transcripts: ENSMUST00000090821.10 ENSMUST00000090823.8 ENSMUST00000107217.6 ENSMUST00000142449.9 ENSMUST00000168321.8 |
||
| CDS-3UTR CCA 90 bp | AATTGCTCCGGAGAGACTTGGGGGCCGAGCTGCAGTGGAGGCCGACTTTCAGGAATGTCAGAAACTTGTTaGGCACCAGCCCCTCCCCTT | + |
|
Preference number: 4 (lower is better) Translates to: NCSGETWGPSCSGGRLSGMSETC*APAPPL Trigger: AAGGGGAGGGGCTGGTGCCCAACAAGTTTCTGACAT...TCCTGAAAGTCGGCCTCCACTGCAGCTCGGCCCCCAAGTCTCTCCGGAGCAATT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000090821.10 ENSMUST00000090823.8 ENSMUST00000107217.6 ENSMUST00000142449.9 ENSMUST00000168321.8 |
||
| CDS-3UTR CCA 90 bp | CACCGCGAGGAAAGTCAGGCAGCGGCTTGGGGACACGGCTGTATTGGGAAGCAGACAGTAGTATTTCTGTaGGGACCAGCCATTCCGTCC | + |
|
Preference number: 4 (lower is better) Translates to: HREESQAAAWGHGCIGKQTVVFL*GPAIPS Trigger: GGACGGAATGGCTGGTCCCCACAGAAATACTACTGT...CTGCTTCCCAATACAGCCGTGTCCCCAAGCCGCTGCCTGACTTTCCTCGCGGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090821.10 ENSMUST00000090823.8 ENSMUST00000107217.6 ENSMUST00000168321.8 |
||
| CDS-3UTR CCA 90 bp | TTGGGGACACGGCTGTATTGGGAAGCAGGGGGCTCCTACACAGTAGGAGGAGGCATGCCATCCACAGTATaGGTCCAGAGAAGCCAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: LGTRLYWEAGGSYTVGGGMPSTV*VQRSQA Trigger: TGCCTGGCTTCTCTGGACCCATACTGTGGATGGCAT...GCCTCCTCCTACTGTGTAGGAGCCCCCTGCTTCCCAATACAGCCGTGTCCCCAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000090821.10 ENSMUST00000090823.8 ENSMUST00000107217.6 ENSMUST00000168321.8 |
||
| CDS-3UTR GCA 90 bp | GACACGGCTGTATTGGGAAGCAGGGGGCTCCTACACAGTAGGAGGAGGCACGTCGTACAAACTGCCCTCTaGAAAGATGGCCACAGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: DTAVLGSRGLLHSRRRHVVQTAL*KDGHSG Trigger: TCCACTGTGGCCATCTTTGCAGAGGGCAGTTTGTAC...GACGTGCCTCCTCCTACTGTGTAGGAGCCCCCTGCTTCCCAATACAGCCGTGTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000090821.10 ENSMUST00000090823.8 ENSMUST00000168321.8 |
||
| CDS-3UTR GCA 90 bp | TGGCGCTCCGAGGGGCGAGTTCCTCGCCAAAGGACAGGGGAAAGACAAGTCAATCCATCCAGACTCCTCTaGTCCTTGAACTTGCCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: WRSEGRVPRQRTGERQVNPSRLL*SLNLPS Trigger: TGAGGGCAAGTTCAAGGAGCAGAGGAGTCTGGATGG...ATTGACTTGTCTTTCCCCTGTCCTTTGGCGAGGAACTCGCCCCTCGGAGCGCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000090821.10 ENSMUST00000090823.8 ENSMUST00000107217.6 ENSMUST00000168321.8 |
||
| CDS-3UTR CCA 90 bp | CACGGATGTAGTTGTAGCATTCGTCCGTCAGCTTTCCCCGGACTGCACAGTTCTAAGGCAGCCTGGGCTTaGGGGAGCGATGACAGCAAC | + |
|
Preference number: 4 (lower is better) Translates to: HGCSCSIRPSAFPGLHSSKAAWA*GSDDSN Trigger: GTTGCTGTCATCGCTCCCCCAAGCCCAGGCTGCCTT...AGAACTGTGCAGTCCGGGGAAAGCTGACGGACGAATGCTACAACTACATCCGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000131620.8 |
||
| CDS-3UTR CCA 90 bp | AAATCTGCTGCTGTGGCTGAGTACAAACTGCCCTCTGCAAAGATGGCCACAGTGTGGGGAAAGGCAGCCTaGGCTTGGGGGAGCGATGAC | + |
|
Preference number: 4 (lower is better) Translates to: KSAAVAEYKLPSAKMATVWGKAA*AWGSDD Trigger: GTCATCGCTCCCCCAAGCCCAGGCTGCCTTTCCCCA...CACTGTGGCCATCTTTGCAGAGGGCAGTTTGTACTCAGCCACAGCAGCAGATTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000142449.9 ENSMUST00000204709.3 |
||
| CDS-3UTR CCA 90 bp | GGCTTGGGGACACGGCTGTATTGGGAAGCAGGGGGCTCCTACACAGTAGGAGGAACAGTAGTATTTCTGTaGGGACCAGCCATTCCGTCC | + |
|
Preference number: 4 (lower is better) Translates to: GLGTRLYWEAGGSYTVGGTVVFL*GPAIPS Trigger: GGACGGAATGGCTGGTCCCCACAGAAATACTACTGT...TCCTCCTACTGTGTAGGAGCCCCCTGCTTCCCAATACAGCCGTGTCCCCAAGCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000090821.10 ENSMUST00000090823.8 ENSMUST00000107217.6 ENSMUST00000168321.8 |
||
| CDS-3UTR CCA 90 bp | TTCCCTCTCCCACCCCAGAGTGTAGGCCGTGGAAAGGTGCCTGACCTCTATCCAATGCCATCCACAGTATaGGTCCAGAGAAGCCAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: FPLPPQSVGRGKVPDLYPMPSTV*VQRSQA Trigger: TGCCTGGCTTCTCTGGACCCATACTGTGGATGGCAT...TGGATAGAGGTCAGGCACCTTTCCACGGCCTACACTCTGGGGTGGGAGAGGGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000090821.10 ENSMUST00000090823.8 ENSMUST00000107217.6 |
||
| CDS-3UTR CCA 90 bp | AATTGCTCCGGAGAGACTTGGGGGCCGAGCTGCAGTGGAGGCCGACTTTCAGGACGCATAGACAAAGTGTaGCTCTGCAAAGATGGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: NCSGETWGPSCSGGRLSGRIDKV*LCKDGH Trigger: GTGGCCATCTTTGCAGAGCCACACTTTGTCTATGCG...TCCTGAAAGTCGGCCTCCACTGCAGCTCGGCCCCCAAGTCTCTCCGGAGCAATT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000107217.6 |
||
| CDS-3UTR TCA 90 bp | GCCCCGGCTCAGCCCACACACACCAGGTCTTTGATTGCCTCCTTCAGGAAACCTAAGGTCAGGAATCTCTaGAAGTCCAGCCCAAGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: APAQPTHTRSLIASFRKPKVRNL*KSSPSS Trigger: GGAACTTGGGCTGGACTTTCAGAGATTCCTGACCTT...AGGTTTCCTGAAGGAGGCAATCAAAGACCTGGTGTGTGTGGGCTGAGCCGGGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090821.10 ENSMUST00000090823.8 ENSMUST00000107217.6 ENSMUST00000142449.9 |
||
| CDS-3UTR TCA 90 bp | TTCCCTCTCCCACCCCAGAGTGTAGGCCGTGGAAAGGTGCCTGACCTCTATCCAAAGGTCAGGAATCTCTaGAAGTCCAGCCCAAGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: FPLPPQSVGRGKVPDLYPKVRNL*KSSPSS Trigger: GGAACTTGGGCTGGACTTTCAGAGATTCCTGACCTT...TGGATAGAGGTCAGGCACCTTTCCACGGCCTACACTCTGGGGTGGGAGAGGGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090821.10 ENSMUST00000090823.8 ENSMUST00000107217.6 ENSMUST00000142449.9 |
||
| CDS-3UTR TCA 90 bp | AGACTTGGGGGCCGAGCTGCAGTGGAGGCCGACTTTCAGGAGCACGGTTACCCACAGTTCTCCATATCTTaGCTCCTCCATGTCAGAAAC | + |
|
Preference number: 4 (lower is better) Translates to: RLGGRAAVEADFQEHGYPQFSIS*LLHVRN Trigger: GTTTCTGACATGGAGGAGTCAAGATATGGAGAACTG...TGGGTAACCGTGCTCCTGAAAGTCGGCCTCCACTGCAGCTCGGCCCCCAAGTCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000090821.10 ENSMUST00000090823.8 ENSMUST00000107217.6 ENSMUST00000142449.9 ENSMUST00000168321.8 |
||
| CDS-3UTR TCA 90 bp | GACACGGCTGTATTGGGAAGCAGGGGGCTCCTACACAGTAGGAGGAGGCACGTCGGAATGCTATTGGTCTaGGTAGTGAAGACCCCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: DTAVLGSRGLLHSRRRHVGMLLV*VVKTPK Trigger: CTTTGGGGTCTTCACTACTCAGACCAATAGCATTCC...GACGTGCCTCCTCCTACTGTGTAGGAGCCCCCTGCTTCCCAATACAGCCGTGTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000090821.10 ENSMUST00000090823.8 ENSMUST00000107217.6 ENSMUST00000168321.8 |
||
| CDS-3UTR GCA 90 bp | TGGCGCTCCGAGGGGCGAGTTCCTCGCCAAAGGACAGGGGAAAGACAAGTCAATCAGGCAAGAAGTGTCTaGGAGTTCCAGGGAACAAGA | + |
|
Preference number: 4 (lower is better) Translates to: WRSEGRVPRQRTGERQVNQARSV*EFQGTR Trigger: TCTTGTTCCCTGGAACTCGCAGACACTTCTTGCCTG...ATTGACTTGTCTTTCCCCTGTCCTTTGGCGAGGAACTCGCCCCTCGGAGCGCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000090821.10 ENSMUST00000090823.8 ENSMUST00000107217.6 ENSMUST00000168321.8 |
||
| CDS-3UTR GCA 90 bp | TTCCCTCTCCCACCCCAGAGTGTAGGCCGTGGAAAGGTGCCTGACCTCTATCCACTTGGAGTCATACTTTaGAGAACGGAGTGGAGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: FPLPPQSVGRGKVPDLYPLGVIL*RTEWRL Trigger: CAGCCTCCACTCCGTTCTGCAAAGTATGACTCCAAG...TGGATAGAGGTCAGGCACCTTTCCACGGCCTACACTCTGGGGTGGGAGAGGGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090821.10 ENSMUST00000090823.8 |
||
| CDS-3UTR CCA 90 bp | TTCCACAGGCAAGAAGTGTCTGCGAGTTCCAGGGAACAAGAACACGGATGTAGTTGGGGAAAGGCAGCCTaGGCTTGGGGGAGCGATGAC | + |
|
Preference number: 4 (lower is better) Translates to: FHRQEVSASSREQEHGCSWGKAA*AWGSDD Trigger: GTCATCGCTCCCCCAAGCCCAGGCTGCCTTTCCCCA...ACTACATCCGTGTTCTTGTTCCCTGGAACTCGCAGACACTTCTTGCCTGTGGAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000131620.8 ENSMUST00000142449.9 ENSMUST00000204709.3 |
||
| CDS-3UTR CCA 90 bp | GTAGTTGTAGCATTCGTCCGTCAGCTTTCCCCGGACTGCACAGTTCTCCATATCAGGTCAACAGAGGGGTaGGGTCCTGGGGAAAGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: VVVAFVRQLSPDCTVLHIRSTEG*GPGERQ Trigger: CTGCCTTTCCCCAGGACCCCACCCCTCTGTTGACCT...GATATGGAGAACTGTGCAGTCCGGGGAAAGCTGACGGACGAATGCTACAACTAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000131620.8 |
||
| CDS-3UTR CCA 90 bp | CCAGGTCCCCTGATACTCATGCAGCCTCTGGATCGATGCCATCCACAGTATGGGATGTCAGAAACTTGTTaGGCACCAGCCCCTCCCCTT | + |
|
Preference number: 4 (lower is better) Translates to: PGPLILMQPLDRCHPQYGMSETC*APAPPL Trigger: AAGGGGAGGGGCTGGTGCCCAACAAGTTTCTGACAT...CCCATACTGTGGATGGCATCGATCCAGAGGCTGCATGAGTATCAGGGGACCTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000142449.9 ENSMUST00000204709.3 |
||
| CDS-3UTR GCA 90 bp | AGGAAACCTTTCCTGATTAACCCCGGTGGGACACCCGCCAAGCCAATTGCTCCGCAGGCAAGAAGTGTCTaGGAGTTCCAGGGAACAAGA | + |
|
Preference number: 4 (lower is better) Translates to: RKPFLINPGGTPAKPIAPQARSV*EFQGTR Trigger: TCTTGTTCCCTGGAACTCGCAGACACTTCTTGCCTG...CGGAGCAATTGGCTTGGCGGGTGTCCCACCGGGGTTAATCAGGAAAGGTTTCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090821.10 ENSMUST00000090823.8 ENSMUST00000107217.6 ENSMUST00000168321.8 |
||
| CDS-3UTR GCA 90 bp | AGGAAACCTTTCCTGATTAACCCCGGTGGGACACCCGCCAAGCCAATTGCTCCGGTAGAAGGCGCAGACTaGAGACCCAGGAATGCTATT | + |
|
Preference number: 4 (lower is better) Translates to: RKPFLINPGGTPAKPIAPVEGAD*RPRNAI Trigger: AATAGCATTCCTGGGTCTGCAGTCTGCGCCTTCTAC...CGGAGCAATTGGCTTGGCGGGTGTCCCACCGGGGTTAATCAGGAAAGGTTTCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090821.10 ENSMUST00000090823.8 ENSMUST00000107217.6 ENSMUST00000168321.8 |
||
| 3UTR CAA 72 bp | CCCCCTGGAGGTAGCACCTTCAGCACTGTCCCATCGTaGGAGCCAAGAAACAGGACAGTAGTATTTCTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: PPGGSTFSTVPS*EPRNRTVVFLW Trigger: CCACAGAAATACTACTGTCCTGTTTCTTGGCTCCAACGATGGGACAGTGCTGAAGGTGCTACCTCCAGGGGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000142449.9 ENSMUST00000204709.3 |
||
| CDS-3UTR TCA 90 bp | GCTGCGGCACATAGGGCTGAAGGAATTTGTTCCACAGGCAAGAAGTGTCTGCGAGATGGAGAGGCACCTTaGAGGTCAGAGGTCAACAGA | + |
|
Preference number: 4 (lower is better) Translates to: AAAHRAEGICSTGKKCLRDGEAP*RSEVNR Trigger: TCTGTTGACCTCTGACCTTCAAGGTGCCTCTCCATC...TCGCAGACACTTCTTGCCTGTGGAACAAATTCCTTCAGCCCTATGTGCCGCAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000131620.8 ENSMUST00000142449.9 ENSMUST00000204709.3 |
||
| 3UTR CAA 72 bp | CAAAGTGTGGCTCTCGAAGCCACTTGGAGTCATACTTaGCAGAACGGAGTGGAGGCTGAGGTCCAAGACTTC | + |
|
Preference number: 4 (lower is better) Translates to: QSVALEATWSHT*QNGVEAEVQDF Trigger: GAAGTCTTGGACCTCAGCCTCCACTCCGTTCTGCAAAGTATGACTCCAAGTGGCTTCGAGAGCCACACTTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000142449.9 ENSMUST00000204709.3 |
||
| CDS-3UTR TCA 90 bp | AACACGGATGTAGTTGTAGCATTCGTCCGTCAGCTTTCCCCGGACTGCACAGTTGATGGAGAGGCACCTTaGAGGTCAGAGGTCAACAGA | + |
|
Preference number: 4 (lower is better) Translates to: NTDVVVAFVRQLSPDCTVDGEAP*RSEVNR Trigger: TCTGTTGACCTCTGACCTTCAAGGTGCCTCTCCATC...AACTGTGCAGTCCGGGGAAAGCTGACGGACGAATGCTACAACTACATCCGTGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131620.8 |
||
| CDS-3UTR TCA 90 bp | GCTGCGGCACATAGGGCTGAAGGAATTTGTTCCACAGGCAAGAAGTGTCTGCGAAAGGTCAGGAATCTCTaGAAGTCCAGCCCAAGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: AAAHRAEGICSTGKKCLRKVRNL*KSSPSS Trigger: GGAACTTGGGCTGGACTTTCAGAGATTCCTGACCTT...TCGCAGACACTTCTTGCCTGTGGAACAAATTCCTTCAGCCCTATGTGCCGCAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000131620.8 ENSMUST00000142449.9 ENSMUST00000204709.3 |
||
| CDS-3UTR TCA 90 bp | GACCCCCTGGAGGTAGCACCTTCAGCACTGTCCCATCGTTGGAGCCAAGAAACACAGTTCTCCATATCTTaGCTCCTCCATGTCAGAAAC | + |
|
Preference number: 4 (lower is better) Translates to: DPLEVAPSALSHRWSQETQFSIS*LLHVRN Trigger: GTTTCTGACATGGAGGAGTCAAGATATGGAGAACTG...TGTTTCTTGGCTCCAACGATGGGACAGTGCTGAAGGTGCTACCTCCAGGGGGTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000142449.9 ENSMUST00000204709.3 |
||
| CDS-3UTR CAA 90 bp | GCACGTCCCGGCCCCGGGAGGCCCGAGGACTCTACACAGCGCGCGGCTCCAGCCCTCGGGGCAGCGCGCTaGCCTTCGGGTGGCACGTCG | + |
|
Preference number: 5 (lower is better) Translates to: ARPGPGRPEDSTQRAAPALGAAR*PSGGTS Trigger: CGACGTGCCACCCGAAGGCAAGCGCGCTGCCCCGAG...GGCTGGAGCCGCGCGCTGTGTAGAGTCCTCGGGCCTCCCGGGGCCGGGACGTGC 77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000090821.10 ENSMUST00000090823.8 ENSMUST00000107217.6 ENSMUST00000168321.8 |
||
| CDS-3UTR CAA 90 bp | GGCCGACTTTCAGGAGCACGGTTACCCAGAGGGCCGGGCGCCGCGCCCTCCTTCCTCGGGGCAGCGCGCTaGCCTTCGGGTGGCACGTCG | + |
|
Preference number: 5 (lower is better) Translates to: GRLSGARLPRGPGAAPSFLGAAR*PSGGTS Trigger: CGACGTGCCACCCGAAGGCAAGCGCGCTGCCCCGAG...GAAGGAGGGCGCGGCGCCCGGCCCTCTGGGTAACCGTGCTCCTGAAAGTCGGCC 73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090821.10 ENSMUST00000090823.8 ENSMUST00000107217.6 ENSMUST00000168321.8 |
||
| CDS-3UTR CAA 90 bp | GGCCGGCCCGCCCGGGGCTCAGTCCGCGGGAGTCCGGAGCGGCGACTTAAGGCACTGGGTGAGGGGACCTaGTCCTCAGACACAGGAGTC | + |
|
Preference number: 5 (lower is better) Translates to: GRPARGSVRGSPERRLKALGEGT*SSDTGV Trigger: GACTCCTGTGTCTGAGGACAAGGTCCCCTCACCCAG...TGCCTTAAGTCGCCGCTCCGGACTCCCGCGGACTGAGCCCCGGGCGGGCCGGCC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000090821.10 ENSMUST00000090823.8 ENSMUST00000107217.6 ENSMUST00000168321.8 |
||
| CDS-3UTR CAA 90 bp | GGAGCGGGGAGTGGGAGTCGGCCAGGTCCCCTGAAATGCTGGCGCTCCGAGGGGGGGGTCTCGATGTCCTaGCTCCGACGGCGGTTCGCG | + |
|
Preference number: 5 (lower is better) Translates to: GAGSGSRPGPLKCWRSEGGVSMS*LRRRFA Trigger: CGCGAACCGCCGTCGGAGCAAGGACATCGAGACCCC...CCCCTCGGAGCGCCAGCATTTCAGGGGACCTGGCCGACTCCCACTCCCCGCTCC 71% GC, longest homopolymer 8 nt, total homopolymer stretches 16 nt. Matches the following 4 transcripts: ENSMUST00000090821.10 ENSMUST00000090823.8 ENSMUST00000107217.6 ENSMUST00000168321.8 |
||
| CDS-3UTR CAA 90 bp | GCACGTCCCGGCCCCGGGAGGCCCGAGGACTCTACACAGCGCGCGGCTCCAGCCCTCCATGTCAGAAACTaGTTGGGCACCAGCCCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: ARPGPGRPEDSTQRAAPALHVRN*LGTSPS Trigger: GGAGGGGCTGGTGCCCAACAAGTTTCTGACATGGAG...GGCTGGAGCCGCGCGCTGTGTAGAGTCCTCGGGCCTCCCGGGGCCGGGACGTGC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000090821.10 ENSMUST00000090823.8 ENSMUST00000107217.6 ENSMUST00000142449.9 ENSMUST00000168321.8 ENSMUST00000204709.3 |
||
| CDS-3UTR CAA 90 bp | AGGAGGAGGCACGTCCCGGCCCCGGGAGGCCCGAGGACTCTACACAGCGCGCGGGGGCCCTCCGAGGCGTaGTTCCCATTCTGGTTCCAT | + |
|
Preference number: 5 (lower is better) Translates to: RRRHVPAPGGPRTLHSARGPSEA*FPFWFH Trigger: ATGGAACCAGAATGGGAACAACGCCTCGGAGGGCCC...CCGCGCGCTGTGTAGAGTCCTCGGGCCTCCCGGGGCCGGGACGTGCCTCCTCCT 70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000090821.10 ENSMUST00000090823.8 ENSMUST00000107217.6 ENSMUST00000168321.8 |
||
| CDS-3UTR CAA 90 bp | GCACGTCCCGGCCCCGGGAGGCCCGAGGACTCTACACAGCGCGCGGCTCCAGCCCCCCTCCCCTTCTTCTaGGGCTTGAAGATCGAAGGA | + |
|
Preference number: 5 (lower is better) Translates to: ARPGPGRPEDSTQRAAPAPLPFF*GLKIEG Trigger: TCCTTCGATCTTCAAGCCCAAGAAGAAGGGGAGGGG...GGCTGGAGCCGCGCGCTGTGTAGAGTCCTCGGGCCTCCCGGGGCCGGGACGTGC 69% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 6 transcripts: ENSMUST00000090821.10 ENSMUST00000090823.8 ENSMUST00000107217.6 ENSMUST00000142449.9 ENSMUST00000168321.8 ENSMUST00000204709.3 |
||
| CDS-3UTR CAA 90 bp | GCCGGCCCGCCCGGGGCTCAGTCCGCGGGAGTCCGGAGCGGCGACTTAAGGCAGCCCCTCCCCTTCTTCTaGGGCTTGAAGATCGAAGGA | + |
|
Preference number: 5 (lower is better) Translates to: AGPPGAQSAGVRSGDLRQPLPFF*GLKIEG Trigger: TCCTTCGATCTTCAAGCCCAAGAAGAAGGGGAGGGG...CTGCCTTAAGTCGCCGCTCCGGACTCCCGCGGACTGAGCCCCGGGCGGGCCGGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 6 transcripts: ENSMUST00000090821.10 ENSMUST00000090823.8 ENSMUST00000107217.6 ENSMUST00000142449.9 ENSMUST00000168321.8 ENSMUST00000204709.3 |
||
| CDS-3UTR CAA 90 bp | AGGAGGAGGCACGTCCCGGCCCCGGGAGGCCCGAGGACTCTACACAGCGCGCGGCATGTCAGAAACTTGTaGGGCACCAGCCCCTCCCCT | + |
|
Preference number: 5 (lower is better) Translates to: RRRHVPAPGGPRTLHSARHVRNL*GTSPSP Trigger: AGGGGAGGGGCTGGTGCCCAACAAGTTTCTGACATG...CCGCGCGCTGTGTAGAGTCCTCGGGCCTCCCGGGGCCGGGACGTGCCTCCTCCT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 6 transcripts: ENSMUST00000090821.10 ENSMUST00000090823.8 ENSMUST00000107217.6 ENSMUST00000142449.9 ENSMUST00000168321.8 ENSMUST00000204709.3 |
||
| CDS-3UTR CAA 90 bp | GCACGTCCCGGCCCCGGGAGGCCCGAGGACTCTACACAGCGCGCGGCTCCAGCCAGCAGCGGGTGTGCCTaGATGAAGAGCAGGACATCA | + |
|
Preference number: 5 (lower is better) Translates to: ARPGPGRPEDSTQRAAPASSGCA*MKSRTS Trigger: TGATGTCCTGCTCTTCATCAAGGCACACCCGCTGCT...GGCTGGAGCCGCGCGCTGTGTAGAGTCCTCGGGCCTCCCGGGGCCGGGACGTGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090821.10 ENSMUST00000090823.8 ENSMUST00000107217.6 ENSMUST00000168321.8 |
||
| CDS-3UTR CAA 90 bp | TCAGTCCGCGGGAGTCCGGAGCGGCGACTTAAGGCAGCGTGGCTGGAAGGGAGCGGGGTCTCGATGTCCTaGCTCCGACGGCGGTTCGCG | + |
|
Preference number: 5 (lower is better) Translates to: SVRGSPERRLKAAWLEGSGVSMS*LRRRFA Trigger: CGCGAACCGCCGTCGGAGCAAGGACATCGAGACCCC...GCTCCCTTCCAGCCACGCTGCCTTAAGTCGCCGCTCCGGACTCCCGCGGACTGA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090821.10 ENSMUST00000090823.8 ENSMUST00000107217.6 ENSMUST00000168321.8 |
||
| CDS-3UTR CAA 90 bp | GGAGCGGGGAGTGGGAGTCGGCCAGGTCCCCTGAAATGCTGGCGCTCCGAGGGGGGAAGACTGGGGCCCTaGTTGGGCATCACTGGGGGA | + |
|
Preference number: 5 (lower is better) Translates to: GAGSGSRPGPLKCWRSEGGRLGP*LGITGG Trigger: TCCCCCAGTGATGCCCAACAAGGGCCCCAGTCTTCC...CCCCTCGGAGCGCCAGCATTTCAGGGGACCTGGCCGACTCCCACTCCCCGCTCC 69% GC, longest homopolymer 6 nt, total homopolymer stretches 23 nt. Matches the following 3 transcripts: ENSMUST00000090823.8 ENSMUST00000107217.6 ENSMUST00000168321.8 |
||
| CDS-3UTR CAA 90 bp | GTCCGCGGGAGTCCGGAGCGGCGACTTAAGGCAGCGTGGCTGGAAGGGAGCGGGGGGCCCTCCGAGGCGTaGTTCCCATTCTGGTTCCAT | + |
|
Preference number: 5 (lower is better) Translates to: VRGSPERRLKAAWLEGSGGPSEA*FPFWFH Trigger: ATGGAACCAGAATGGGAACAACGCCTCGGAGGGCCC...CCCGCTCCCTTCCAGCCACGCTGCCTTAAGTCGCCGCTCCGGACTCCCGCGGAC 68% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 4 transcripts: ENSMUST00000090821.10 ENSMUST00000090823.8 ENSMUST00000107217.6 ENSMUST00000168321.8 |
||
| CDS-3UTR CAA 90 bp | GGAGCGGGGAGTGGGAGTCGGCCAGGTCCCCTGAAATGCTGGCGCTCCGAGGGGGGGCCCTCCGAGGCGTaGTTCCCATTCTGGTTCCAT | + |
|
Preference number: 5 (lower is better) Translates to: GAGSGSRPGPLKCWRSEGGPSEA*FPFWFH Trigger: ATGGAACCAGAATGGGAACAACGCCTCGGAGGGCCC...CCCCTCGGAGCGCCAGCATTTCAGGGGACCTGGCCGACTCCCACTCCCCGCTCC 68% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt. Matches the following 4 transcripts: ENSMUST00000090821.10 ENSMUST00000090823.8 ENSMUST00000107217.6 ENSMUST00000168321.8 |
||
| CDS-3UTR CAA 90 bp | GCCGGCCCGCCCGGGGCTCAGTCCGCGGGAGTCCGGAGCGGCGACTTAAGGCAGCTCCTCACCCTCCTGTaGCAGAGATGTTATCCCATA | + |
|
Preference number: 5 (lower is better) Translates to: AGPPGAQSAGVRSGDLRQLLTLL*QRCYPI Trigger: TATGGGATAACATCTCTGCAACAGGAGGGTGAGGAG...CTGCCTTAAGTCGCCGCTCCGGACTCCCGCGGACTGAGCCCCGGGCGGGCCGGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090821.10 ENSMUST00000090823.8 ENSMUST00000107217.6 ENSMUST00000168321.8 |
||
| CDS-3UTR CAA 90 bp | CCCGGCACCCCCAATCAGTACCCACTGCTCTCCTGGGCCCCGGCTCAGCCCACACTGGGTGAGGGGACCTaGTCCTCAGACACAGGAGTC | + |
|
Preference number: 5 (lower is better) Translates to: PGTPNQYPLLSWAPAQPTLGEGT*SSDTGV Trigger: GACTCCTGTGTCTGAGGACAAGGTCCCCTCACCCAG...TGTGGGCTGAGCCGGGGCCCAGGAGAGCAGTGGGTACTGATTGGGGGTGCCGGG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000090821.10 ENSMUST00000090823.8 ENSMUST00000107217.6 |
||
| CDS-3UTR CAA 90 bp | CGGAGCGGCGACTTAAGGCAGCGTGGCTGGAAGGGAGCGGGGAGTGGGAGTCGGGGGCCCTCCGAGGCGTaGTTCCCATTCTGGTTCCAT | + |
|
Preference number: 5 (lower is better) Translates to: RSGDLRQRGWKGAGSGSRGPSEA*FPFWFH Trigger: ATGGAACCAGAATGGGAACAACGCCTCGGAGGGCCC...CCGACTCCCACTCCCCGCTCCCTTCCAGCCACGCTGCCTTAAGTCGCCGCTCCG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000090821.10 ENSMUST00000090823.8 ENSMUST00000107217.6 ENSMUST00000168321.8 |
||
| CDS-3UTR CAA 90 bp | TTGGGGACACGGCTGTATTGGGAAGCAGGGGGCTCCTACACAGTAGGAGGAGGCCTCGGGGCAGCGCGCTaGCCTTCGGGTGGCACGTCG | + |
|
Preference number: 5 (lower is better) Translates to: LGTRLYWEAGGSYTVGGGLGAAR*PSGGTS Trigger: CGACGTGCCACCCGAAGGCAAGCGCGCTGCCCCGAG...GCCTCCTCCTACTGTGTAGGAGCCCCCTGCTTCCCAATACAGCCGTGTCCCCAA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000090821.10 ENSMUST00000090823.8 ENSMUST00000107217.6 ENSMUST00000168321.8 |
||
| CDS-3UTR CAA 90 bp | GACACGGCTGTATTGGGAAGCAGGGGGCTCCTACACAGTAGGAGGAGGCACGTCCTCGGGGCAGCGCGCTaGCCTTCGGGTGGCACGTCG | + |
|
Preference number: 5 (lower is better) Translates to: DTAVLGSRGLLHSRRRHVLGAAR*PSGGTS Trigger: CGACGTGCCACCCGAAGGCAAGCGCGCTGCCCCGAG...GACGTGCCTCCTCCTACTGTGTAGGAGCCCCCTGCTTCCCAATACAGCCGTGTC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000090821.10 ENSMUST00000090823.8 ENSMUST00000107217.6 ENSMUST00000168321.8 |
||
| CDS-3UTR CAA 90 bp | GCACGTCCCGGCCCCGGGAGGCCCGAGGACTCTACACAGCGCGCGGCTCCAGCCCCCTTCTTCTTGGGCTaGAAGATCGAAGGAGAAAAC | + |
|
Preference number: 5 (lower is better) Translates to: ARPGPGRPEDSTQRAAPAPFFLG*KIEGEN Trigger: GTTTTCTCCTTCGATCTTCAAGCCCAAGAAGAAGGG...GGCTGGAGCCGCGCGCTGTGTAGAGTCCTCGGGCCTCCCGGGGCCGGGACGTGC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 6 transcripts: ENSMUST00000090821.10 ENSMUST00000090823.8 ENSMUST00000107217.6 ENSMUST00000142449.9 ENSMUST00000168321.8 ENSMUST00000204709.3 |
||
| CDS-3UTR CAA 90 bp | GGAGCGGGGAGTGGGAGTCGGCCAGGTCCCCTGAAATGCTGGCGCTCCGAGGGGAGCAGCGGGTGTGCCTaGATGAAGAGCAGGACATCA | + |
|
Preference number: 5 (lower is better) Translates to: GAGSGSRPGPLKCWRSEGSSGCA*MKSRTS Trigger: TGATGTCCTGCTCTTCATCAAGGCACACCCGCTGCT...CCCCTCGGAGCGCCAGCATTTCAGGGGACCTGGCCGACTCCCACTCCCCGCTCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000090821.10 ENSMUST00000090823.8 ENSMUST00000107217.6 ENSMUST00000168321.8 |
||
| CDS-3UTR CAA 90 bp | AGACTTGGGGGCCGAGCTGCAGTGGAGGCCGACTTTCAGGAGCACGGTTACCCAGGGGTCTCGATGTCCTaGCTCCGACGGCGGTTCGCG | + |
|
Preference number: 5 (lower is better) Translates to: RLGGRAAVEADFQEHGYPGVSMS*LRRRFA Trigger: CGCGAACCGCCGTCGGAGCAAGGACATCGAGACCCC...TGGGTAACCGTGCTCCTGAAAGTCGGCCTCCACTGCAGCTCGGCCCCCAAGTCT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000090821.10 ENSMUST00000090823.8 ENSMUST00000107217.6 ENSMUST00000168321.8 |
||
| CDS-3UTR CAA 90 bp | CCCGGCACCCCCAATCAGTACCCACTGCTCTCCTGGGCCCCGGCTCAGCCCACACCCCTCCCCTTCTTCTaGGGCTTGAAGATCGAAGGA | + |
|
Preference number: 5 (lower is better) Translates to: PGTPNQYPLLSWAPAQPTPLPFF*GLKIEG Trigger: TCCTTCGATCTTCAAGCCCAAGAAGAAGGGGAGGGG...TGTGGGCTGAGCCGGGGCCCAGGAGAGCAGTGGGTACTGATTGGGGGTGCCGGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 4 transcripts: ENSMUST00000090821.10 ENSMUST00000090823.8 ENSMUST00000107217.6 ENSMUST00000142449.9 |
||
| CDS-3UTR CAA 90 bp | AGCAGGGGGCTCCTACACAGTAGGAGGAGGCACGTCCCGGCCCCGGGAGGCCCGACTTGGAGTCATACTTaGCAGAACGGAGTGGAGGCT | + |
|
Preference number: 5 (lower is better) Translates to: SRGLLHSRRRHVPAPGGPTWSHT*QNGVEA Trigger: AGCCTCCACTCCGTTCTGCAAAGTATGACTCCAAGT...CGGGCCTCCCGGGGCCGGGACGTGCCTCCTCCTACTGTGTAGGAGCCCCCTGCT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000090821.10 ENSMUST00000090823.8 ENSMUST00000168321.8 |
||
| CDS-3UTR CAA 90 bp | CTCCGGAGAGACTTGGGGGCCGAGCTGCAGTGGAGGCCGACTTTCAGGAGCACGCTGGGTGAGGGGACCTaGTCCTCAGACACAGGAGTC | + |
|
Preference number: 5 (lower is better) Translates to: LRRDLGAELQWRPTFRSTLGEGT*SSDTGV Trigger: GACTCCTGTGTCTGAGGACAAGGTCCCCTCACCCAG...CGTGCTCCTGAAAGTCGGCCTCCACTGCAGCTCGGCCCCCAAGTCTCTCCGGAG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000090821.10 ENSMUST00000090823.8 ENSMUST00000107217.6 ENSMUST00000168321.8 |
||
| CDS-3UTR CAA 90 bp | TGGGAAGCAGGGGGCTCCTACACAGTAGGAGGAGGCACGTCCCGGCCCCGGGAGAGCAGCGGGTGTGCCTaGATGAAGAGCAGGACATCA | + |
|
Preference number: 5 (lower is better) Translates to: WEAGGSYTVGGGTSRPRESSGCA*MKSRTS Trigger: TGATGTCCTGCTCTTCATCAAGGCACACCCGCTGCT...CTCCCGGGGCCGGGACGTGCCTCCTCCTACTGTGTAGGAGCCCCCTGCTTCCCA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000090821.10 ENSMUST00000090823.8 ENSMUST00000107217.6 ENSMUST00000168321.8 |
||
| CDS-3UTR CAA 90 bp | CTCCCGCACCGCGAGGAAAGTCAGGCAGCGGCTTGGGGACACGGCTGTATTGGGAGACTGGGGCCCTTGTaGGGCATCACTGGGGGAACT | + |
|
Preference number: 5 (lower is better) Translates to: LPHREESQAAAWGHGCIGRLGPL*GITGGT Trigger: AGTTCCCCCAGTGATGCCCAACAAGGGCCCCAGTCT...CCCAATACAGCCGTGTCCCCAAGCCGCTGCCTGACTTTCCTCGCGGTGCGGGAG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000090823.8 ENSMUST00000107217.6 ENSMUST00000168321.8 |
||
| CDS-3UTR CAA 90 bp | CCCGCACCGCGAGGAAAGTCAGGCAGCGGCTTGGGGACACGGCTGTATTGGGAAGGAAGACTGGGGCCCTaGTTGGGCATCACTGGGGGA | + |
|
Preference number: 5 (lower is better) Translates to: PAPRGKSGSGLGTRLYWEGRLGP*LGITGG Trigger: TCCCCCAGTGATGCCCAACAAGGGCCCCAGTCTTCC...TTCCCAATACAGCCGTGTCCCCAAGCCGCTGCCTGACTTTCCTCGCGGTGCGGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000090823.8 ENSMUST00000107217.6 ENSMUST00000168321.8 |
||
| CDS-3UTR CAA 90 bp | TCAGTCCGCGGGAGTCCGGAGCGGCGACTTAAGGCAGCGTGGCTGGAAGGGAGCCCCCTCCCCTTCTTCTaGGGCTTGAAGATCGAAGGA | + |
|
Preference number: 5 (lower is better) Translates to: SVRGSPERRLKAAWLEGSPLPFF*GLKIEG Trigger: TCCTTCGATCTTCAAGCCCAAGAAGAAGGGGAGGGG...GCTCCCTTCCAGCCACGCTGCCTTAAGTCGCCGCTCCGGACTCCCGCGGACTGA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000090821.10 ENSMUST00000090823.8 ENSMUST00000107217.6 ENSMUST00000142449.9 ENSMUST00000168321.8 ENSMUST00000204709.3 |
||
| CDS-3UTR CAA 90 bp | GAGTGGGAGTCGGCCAGGTCCCCTGAAATGCTGGCGCTCCGAGGGGCGAGTTCCCCCCTCCCCTTCTTCTaGGGCTTGAAGATCGAAGGA | + |
|
Preference number: 5 (lower is better) Translates to: EWESARSPEMLALRGASSPLPFF*GLKIEG Trigger: TCCTTCGATCTTCAAGCCCAAGAAGAAGGGGAGGGG...GGAACTCGCCCCTCGGAGCGCCAGCATTTCAGGGGACCTGGCCGACTCCCACTC 63% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt. Matches the following 6 transcripts: ENSMUST00000090821.10 ENSMUST00000090823.8 ENSMUST00000107217.6 ENSMUST00000142449.9 ENSMUST00000168321.8 ENSMUST00000204709.3 |
||
| CDS-3UTR CAA 90 bp | GCCGGCCCGCCCGGGGCTCAGTCCGCGGGAGTCCGGAGCGGCGACTTAAGGCAGACAGTTCTCCATATCTaGACTCCTCCATGTCAGAAA | + |
|
Preference number: 5 (lower is better) Translates to: AGPPGAQSAGVRSGDLRQTVLHI*TPPCQK Trigger: TTTCTGACATGGAGGAGTCAAGATATGGAGAACTGT...CTGCCTTAAGTCGCCGCTCCGGACTCCCGCGGACTGAGCCCCGGGCGGGCCGGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000090821.10 ENSMUST00000090823.8 ENSMUST00000107217.6 ENSMUST00000142449.9 ENSMUST00000168321.8 ENSMUST00000204709.3 |
||
| CDS-3UTR CAA 90 bp | GGAGCGGGGAGTGGGAGTCGGCCAGGTCCCCTGAAATGCTGGCGCTCCGAGGGGGGCTCTCGAAGCCACTaGGAGTCATACTTTGCAGAA | + |
|
Preference number: 5 (lower is better) Translates to: GAGSGSRPGPLKCWRSEGGSRSH*ESYFAE Trigger: TTCTGCAAAGTATGACTCCAAGTGGCTTCGAGAGCC...CCCCTCGGAGCGCCAGCATTTCAGGGGACCTGGCCGACTCCCACTCCCCGCTCC 63% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000090821.10 ENSMUST00000090823.8 ENSMUST00000168321.8 |
||
| CDS-3UTR CAA 90 bp | GAGTGGGAGTCGGCCAGGTCCCCTGAAATGCTGGCGCTCCGAGGGGCGAGTTCCCCAGGGACAGAGCAGTaGAGCCTCAGCTTAAGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: EWESARSPEMLALRGASSPGTEQ*SLSLRK Trigger: CTTCCTTAAGCTGAGGCTCAACTGCTCTGTCCCTGG...GGAACTCGCCCCTCGGAGCGCCAGCATTTCAGGGGACCTGGCCGACTCCCACTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000090821.10 ENSMUST00000090823.8 ENSMUST00000107217.6 ENSMUST00000168321.8 |
||
| CDS-3UTR CAA 90 bp | TGGGAAGCAGGGGGCTCCTACACAGTAGGAGGAGGCACGTCCCGGCCCCGGGAGAGACTCCTCTGCTCCTaGAACTTGCCCTCAAAGCCA | + |
|
Preference number: 5 (lower is better) Translates to: WEAGGSYTVGGGTSRPRERLLCS*NLPSKP Trigger: TGGCTTTGAGGGCAAGTTCAAGGAGCAGAGGAGTCT...CTCCCGGGGCCGGGACGTGCCTCCTCCTACTGTGTAGGAGCCCCCTGCTTCCCA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000090821.10 ENSMUST00000090823.8 ENSMUST00000107217.6 ENSMUST00000168321.8 |
||
| CDS-3UTR CAA 90 bp | CGGAGCGGCGACTTAAGGCAGCGTGGCTGGAAGGGAGCGGGGAGTGGGAGTCGGAGCACTGTCCCATCGTaGGAGCCAAGAAACAGGACA | + |
|
Preference number: 5 (lower is better) Translates to: RSGDLRQRGWKGAGSGSRSTVPS*EPRNRT Trigger: TGTCCTGTTTCTTGGCTCCAACGATGGGACAGTGCT...CCGACTCCCACTCCCCGCTCCCTTCCAGCCACGCTGCCTTAAGTCGCCGCTCCG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090821.10 ENSMUST00000090823.8 ENSMUST00000107217.6 ENSMUST00000168321.8 |
||
| CDS-3UTR CAA 90 bp | GGAGCGGGGAGTGGGAGTCGGCCAGGTCCCCTGAAATGCTGGCGCTCCGAGGGGCCCTTCTTCTTGGGCTaGAAGATCGAAGGAGAAAAC | + |
|
Preference number: 5 (lower is better) Translates to: GAGSGSRPGPLKCWRSEGPFFLG*KIEGEN Trigger: GTTTTCTCCTTCGATCTTCAAGCCCAAGAAGAAGGG...CCCCTCGGAGCGCCAGCATTTCAGGGGACCTGGCCGACTCCCACTCCCCGCTCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 6 transcripts: ENSMUST00000090821.10 ENSMUST00000090823.8 ENSMUST00000107217.6 ENSMUST00000142449.9 ENSMUST00000168321.8 ENSMUST00000204709.3 |
||
| CDS-3UTR CAA 90 bp | CCCTCCTTCCCCTCCCGCACCGCGAGGAAAGTCAGGCAGCGGCTTGGGGACACGCTCCTCACCCTCCTGTaGCAGAGATGTTATCCCATA | + |
|
Preference number: 5 (lower is better) Translates to: PSFPSRTARKVRQRLGDTLLTLL*QRCYPI Trigger: TATGGGATAACATCTCTGCAACAGGAGGGTGAGGAG...CGTGTCCCCAAGCCGCTGCCTGACTTTCCTCGCGGTGCGGGAGGGGAAGGAGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000090821.10 ENSMUST00000090823.8 ENSMUST00000107217.6 ENSMUST00000168321.8 |
||
| CDS-3UTR CAA 90 bp | CGGAGCGGCGACTTAAGGCAGCGTGGCTGGAAGGGAGCGGGGAGTGGGAGTCGGGGCTCTCGAAGCCACTaGGAGTCATACTTTGCAGAA | + |
|
Preference number: 5 (lower is better) Translates to: RSGDLRQRGWKGAGSGSRGSRSH*ESYFAE Trigger: TTCTGCAAAGTATGACTCCAAGTGGCTTCGAGAGCC...CCGACTCCCACTCCCCGCTCCCTTCCAGCCACGCTGCCTTAAGTCGCCGCTCCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000090821.10 ENSMUST00000090823.8 ENSMUST00000168321.8 |
||
| CDS-3UTR CAA 90 bp | AGGAAACCTTTCCTGATTAACCCCGGTGGGACACCCGCCAAGCCAATTGCTCCGGGGGTCTCGATGTCCTaGCTCCGACGGCGGTTCGCG | + |
|
Preference number: 5 (lower is better) Translates to: RKPFLINPGGTPAKPIAPGVSMS*LRRRFA Trigger: CGCGAACCGCCGTCGGAGCAAGGACATCGAGACCCC...CGGAGCAATTGGCTTGGCGGGTGTCCCACCGGGGTTAATCAGGAAAGGTTTCCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000090821.10 ENSMUST00000090823.8 ENSMUST00000107217.6 ENSMUST00000168321.8 |
||
| CDS-3UTR CAA 90 bp | GACACGGCTGTATTGGGAAGCAGGGGGCTCCTACACAGTAGGAGGAGGCACGTCGGAAGACTGGGGCCCTaGTTGGGCATCACTGGGGGA | + |
|
Preference number: 5 (lower is better) Translates to: DTAVLGSRGLLHSRRRHVGRLGP*LGITGG Trigger: TCCCCCAGTGATGCCCAACAAGGGCCCCAGTCTTCC...GACGTGCCTCCTCCTACTGTGTAGGAGCCCCCTGCTTCCCAATACAGCCGTGTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000090823.8 ENSMUST00000107217.6 ENSMUST00000168321.8 |
||
| CDS-3UTR CAA 90 bp | CCCGGCACCCCCAATCAGTACCCACTGCTCTCCTGGGCCCCGGCTCAGCCCACACCCTTCTTCTTGGGCTaGAAGATCGAAGGAGAAAAC | + |
|
Preference number: 5 (lower is better) Translates to: PGTPNQYPLLSWAPAQPTPFFLG*KIEGEN Trigger: GTTTTCTCCTTCGATCTTCAAGCCCAAGAAGAAGGG...TGTGGGCTGAGCCGGGGCCCAGGAGAGCAGTGGGTACTGATTGGGGGTGCCGGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000090821.10 ENSMUST00000090823.8 ENSMUST00000107217.6 ENSMUST00000142449.9 |
||
| CDS-3UTR CAA 90 bp | CCAATTGCTCCGGAGAGACTTGGGGGCCGAGCTGCAGTGGAGGCCGACTTTCAGCATGTCAGAAACTTGTaGGGCACCAGCCCCTCCCCT | + |
|
Preference number: 5 (lower is better) Translates to: PIAPERLGGRAAVEADFQHVRNL*GTSPSP Trigger: AGGGGAGGGGCTGGTGCCCAACAAGTTTCTGACATG...CTGAAAGTCGGCCTCCACTGCAGCTCGGCCCCCAAGTCTCTCCGGAGCAATTGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000090821.10 ENSMUST00000090823.8 ENSMUST00000107217.6 ENSMUST00000142449.9 ENSMUST00000168321.8 |
||
| CDS-3UTR CAA 90 bp | TCGATGTCCTTGCTCCGACGGCGGTTCGCGCGACGACAAGCACAGGACACCAAGCTCCATGTCAGAAACTaGTTGGGCACCAGCCCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: SMSLLRRRFARRQAQDTKLHVRN*LGTSPS Trigger: GGAGGGGCTGGTGCCCAACAAGTTTCTGACATGGAG...CTTGGTGTCCTGTGCTTGTCGTCGCGCGAACCGCCGTCGGAGCAAGGACATCGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000142449.9 ENSMUST00000204709.3 |
||
| CDS-3UTR CAA 90 bp | GAGTGGGAGTCGGCCAGGTCCCCTGAAATGCTGGCGCTCCGAGGGGCGAGTTCCACTTGGAGTCATACTTaGCAGAACGGAGTGGAGGCT | + |
|
Preference number: 5 (lower is better) Translates to: EWESARSPEMLALRGASSTWSHT*QNGVEA Trigger: AGCCTCCACTCCGTTCTGCAAAGTATGACTCCAAGT...GGAACTCGCCCCTCGGAGCGCCAGCATTTCAGGGGACCTGGCCGACTCCCACTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000090821.10 ENSMUST00000090823.8 ENSMUST00000168321.8 |
||
| CDS-3UTR CAA 90 bp | CCGCGAGGAAAGTCAGGCAGCGGCTTGGGGACACGGCTGTATTGGGAAGCAGGGCCAGGGACAGAGCAGTaGAGCCTCAGCTTAAGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: PRGKSGSGLGTRLYWEAGPGTEQ*SLSLRK Trigger: CTTCCTTAAGCTGAGGCTCAACTGCTCTGTCCCTGG...CCCTGCTTCCCAATACAGCCGTGTCCCCAAGCCGCTGCCTGACTTTCCTCGCGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090821.10 ENSMUST00000090823.8 ENSMUST00000107217.6 ENSMUST00000168321.8 |
||
| CDS-3UTR CAA 90 bp | CTCCCGCACCGCGAGGAAAGTCAGGCAGCGGCTTGGGGACACGGCTGTATTGGGCTCTGCTCCTTGAACTaGCCCTCAAAGCCACGTTCA | + |
|
Preference number: 5 (lower is better) Translates to: LPHREESQAAAWGHGCIGLCSLN*PSKPRS Trigger: TGAACGTGGCTTTGAGGGCAAGTTCAAGGAGCAGAG...CCCAATACAGCCGTGTCCCCAAGCCGCTGCCTGACTTTCCTCGCGGTGCGGGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090821.10 ENSMUST00000090823.8 ENSMUST00000107217.6 ENSMUST00000168321.8 |
||
| CDS-3UTR CAA 90 bp | CTCCCGCACCGCGAGGAAAGTCAGGCAGCGGCTTGGGGACACGGCTGTATTGGGAGACTCCTCTGCTCCTaGAACTTGCCCTCAAAGCCA | + |
|
Preference number: 5 (lower is better) Translates to: LPHREESQAAAWGHGCIGRLLCS*NLPSKP Trigger: TGGCTTTGAGGGCAAGTTCAAGGAGCAGAGGAGTCT...CCCAATACAGCCGTGTCCCCAAGCCGCTGCCTGACTTTCCTCGCGGTGCGGGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090821.10 ENSMUST00000090823.8 ENSMUST00000107217.6 ENSMUST00000168321.8 |
||
| CDS-3UTR CAA 90 bp | CTCCGGAGAGACTTGGGGGCCGAGCTGCAGTGGAGGCCGACTTTCAGGAGCACGAGCACTGTCCCATCGTaGGAGCCAAGAAACAGGACA | + |
|
Preference number: 5 (lower is better) Translates to: LRRDLGAELQWRPTFRSTSTVPS*EPRNRT Trigger: TGTCCTGTTTCTTGGCTCCAACGATGGGACAGTGCT...CGTGCTCCTGAAAGTCGGCCTCCACTGCAGCTCGGCCCCCAAGTCTCTCCGGAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000090821.10 ENSMUST00000090823.8 ENSMUST00000107217.6 ENSMUST00000168321.8 |
||
| CDS TCA 90 bp | TCCCGGGCAGCCACAAGCAAGGTCCGGTTCAAGGTCAGGAATCTCTaGAAGTCCAGCCCAAGTTCCGCAGCCACAGCATCGTCCTCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: SRAATSKVRFKVRNL*KSSPSSAATASSSR Trigger: CCTGGAGGACGATGCTGTGGCTGCGGAACTTGGGCTGGACTTTCAGAGATTCCTGACCTTGAACCGGACCTTGCTTGTGGCTGCCCGGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000090821.10 ENSMUST00000090823.8 ENSMUST00000107217.6 ENSMUST00000142449.9 ENSMUST00000168321.8 ENSMUST00000202315.3 ENSMUST00000204709.3 |
||
| CDS-3UTR CAA 90 bp | TTGGGGACACGGCTGTATTGGGAAGCAGGGGGCTCCTACACAGTAGGAGGAGGCCATGTCAGAAACTTGTaGGGCACCAGCCCCTCCCCT | + |
|
Preference number: 5 (lower is better) Translates to: LGTRLYWEAGGSYTVGGGHVRNL*GTSPSP Trigger: AGGGGAGGGGCTGGTGCCCAACAAGTTTCTGACATG...GCCTCCTCCTACTGTGTAGGAGCCCCCTGCTTCCCAATACAGCCGTGTCCCCAA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 5 transcripts: ENSMUST00000090821.10 ENSMUST00000090823.8 ENSMUST00000107217.6 ENSMUST00000142449.9 ENSMUST00000168321.8 |
||
| CDS-3UTR CAA 90 bp | GGCTTGGGGACACGGCTGTATTGGGAAGCAGGGGGCTCCTACACAGTAGGAGGACTCCATGTCAGAAACTaGTTGGGCACCAGCCCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: GLGTRLYWEAGGSYTVGGLHVRN*LGTSPS Trigger: GGAGGGGCTGGTGCCCAACAAGTTTCTGACATGGAG...TCCTCCTACTGTGTAGGAGCCCCCTGCTTCCCAATACAGCCGTGTCCCCAAGCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000090821.10 ENSMUST00000090823.8 ENSMUST00000107217.6 ENSMUST00000142449.9 ENSMUST00000168321.8 |
||
| CDS-3UTR CAA 90 bp | GGAGCGGGGAGTGGGAGTCGGCCAGGTCCCCTGAAATGCTGGCGCTCCGAGGGGACAGTTCTCCATATCTaGACTCCTCCATGTCAGAAA | + |
|
Preference number: 5 (lower is better) Translates to: GAGSGSRPGPLKCWRSEGTVLHI*TPPCQK Trigger: TTTCTGACATGGAGGAGTCAAGATATGGAGAACTGT...CCCCTCGGAGCGCCAGCATTTCAGGGGACCTGGCCGACTCCCACTCCCCGCTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 6 transcripts: ENSMUST00000090821.10 ENSMUST00000090823.8 ENSMUST00000107217.6 ENSMUST00000142449.9 ENSMUST00000168321.8 ENSMUST00000204709.3 |
||
| CDS-3UTR CAA 90 bp | CACCGCGAGGAAAGTCAGGCAGCGGCTTGGGGACACGGCTGTATTGGGAAGCAGCCAGGGACAGAGCAGTaGAGCCTCAGCTTAAGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: HREESQAAAWGHGCIGKQPGTEQ*SLSLRK Trigger: CTTCCTTAAGCTGAGGCTCAACTGCTCTGTCCCTGG...CTGCTTCCCAATACAGCCGTGTCCCCAAGCCGCTGCCTGACTTTCCTCGCGGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090821.10 ENSMUST00000090823.8 ENSMUST00000107217.6 ENSMUST00000168321.8 |
||
| CDS-3UTR CAA 90 bp | AGACTTGGGGGCCGAGCTGCAGTGGAGGCCGACTTTCAGGAGCACGGTTACCCACCAGGGACAGAGCAGTaGAGCCTCAGCTTAAGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: RLGGRAAVEADFQEHGYPPGTEQ*SLSLRK Trigger: CTTCCTTAAGCTGAGGCTCAACTGCTCTGTCCCTGG...TGGGTAACCGTGCTCCTGAAAGTCGGCCTCCACTGCAGCTCGGCCCCCAAGTCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000090821.10 ENSMUST00000090823.8 ENSMUST00000107217.6 ENSMUST00000168321.8 |
||
| CDS-3UTR CAA 90 bp | TTCCCTCTCCCACCCCAGAGTGTAGGCCGTGGAAAGGTGCCTGACCTCTATCCACTGGGTGAGGGGACCTaGTCCTCAGACACAGGAGTC | + |
|
Preference number: 5 (lower is better) Translates to: FPLPPQSVGRGKVPDLYPLGEGT*SSDTGV Trigger: GACTCCTGTGTCTGAGGACAAGGTCCCCTCACCCAG...TGGATAGAGGTCAGGCACCTTTCCACGGCCTACACTCTGGGGTGGGAGAGGGAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000090821.10 ENSMUST00000090823.8 ENSMUST00000107217.6 |
||
| CDS-3UTR CAA 90 bp | TTCCCTCTCCCACCCCAGAGTGTAGGCCGTGGAAAGGTGCCTGACCTCTATCCACTCCATGTCAGAAACTaGTTGGGCACCAGCCCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: FPLPPQSVGRGKVPDLYPLHVRN*LGTSPS Trigger: GGAGGGGCTGGTGCCCAACAAGTTTCTGACATGGAG...TGGATAGAGGTCAGGCACCTTTCCACGGCCTACACTCTGGGGTGGGAGAGGGAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000090821.10 ENSMUST00000090823.8 ENSMUST00000107217.6 ENSMUST00000142449.9 |
||
| CDS-3UTR CAA 90 bp | GCCCCGGCTCAGCCCACACACACCAGGTCTTTGATTGCCTCCTTCAGGAAACCTCTCCATGTCAGAAACTaGTTGGGCACCAGCCCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: APAQPTHTRSLIASFRKPLHVRN*LGTSPS Trigger: GGAGGGGCTGGTGCCCAACAAGTTTCTGACATGGAG...AGGTTTCCTGAAGGAGGCAATCAAAGACCTGGTGTGTGTGGGCTGAGCCGGGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000090821.10 ENSMUST00000090823.8 ENSMUST00000107217.6 ENSMUST00000142449.9 |
||
| CDS-3UTR CAA 90 bp | CGGAGCGGCGACTTAAGGCAGCGTGGCTGGAAGGGAGCGGGGAGTGGGAGTCGGACAGTTCTCCATATCTaGACTCCTCCATGTCAGAAA | + |
|
Preference number: 5 (lower is better) Translates to: RSGDLRQRGWKGAGSGSRTVLHI*TPPCQK Trigger: TTTCTGACATGGAGGAGTCAAGATATGGAGAACTGT...CCGACTCCCACTCCCCGCTCCCTTCCAGCCACGCTGCCTTAAGTCGCCGCTCCG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000090821.10 ENSMUST00000090823.8 ENSMUST00000107217.6 ENSMUST00000142449.9 ENSMUST00000168321.8 ENSMUST00000204709.3 |
||
| CDS-3UTR CAA 90 bp | CCCGCACCGCGAGGAAAGTCAGGCAGCGGCTTGGGGACACGGCTGTATTGGGAACTCCTCACCCTCCTGTaGCAGAGATGTTATCCCATA | + |
|
Preference number: 5 (lower is better) Translates to: PAPRGKSGSGLGTRLYWELLTLL*QRCYPI Trigger: TATGGGATAACATCTCTGCAACAGGAGGGTGAGGAG...TTCCCAATACAGCCGTGTCCCCAAGCCGCTGCCTGACTTTCCTCGCGGTGCGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090821.10 ENSMUST00000090823.8 ENSMUST00000107217.6 ENSMUST00000168321.8 |
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| CDS-3UTR CAA 90 bp | CCAATTGCTCCGGAGAGACTTGGGGGCCGAGCTGCAGTGGAGGCCGACTTTCAGCTCTGCTCCTTGAACTaGCCCTCAAAGCCACGTTCA | + |
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Preference number: 5 (lower is better) Translates to: PIAPERLGGRAAVEADFQLCSLN*PSKPRS Trigger: TGAACGTGGCTTTGAGGGCAAGTTCAAGGAGCAGAG...CTGAAAGTCGGCCTCCACTGCAGCTCGGCCCCCAAGTCTCTCCGGAGCAATTGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000090821.10 ENSMUST00000090823.8 ENSMUST00000107217.6 ENSMUST00000168321.8 |
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| CDS-3UTR CAA 90 bp | AGACTTGGGGGCCGAGCTGCAGTGGAGGCCGACTTTCAGGAGCACGGTTACCCAAGACTCCTCTGCTCCTaGAACTTGCCCTCAAAGCCA | + |
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Preference number: 5 (lower is better) Translates to: RLGGRAAVEADFQEHGYPRLLCS*NLPSKP Trigger: TGGCTTTGAGGGCAAGTTCAAGGAGCAGAGGAGTCT...TGGGTAACCGTGCTCCTGAAAGTCGGCCTCCACTGCAGCTCGGCCCCCAAGTCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000090821.10 ENSMUST00000090823.8 ENSMUST00000107217.6 ENSMUST00000168321.8 |
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| CDS-3UTR CAA 90 bp | TTGGGGACACGGCTGTATTGGGAAGCAGGGGGCTCCTACACAGTAGGAGGAGGCAGCAGCGGGTGTGCCTaGATGAAGAGCAGGACATCA | + |
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Preference number: 5 (lower is better) Translates to: LGTRLYWEAGGSYTVGGGSSGCA*MKSRTS Trigger: TGATGTCCTGCTCTTCATCAAGGCACACCCGCTGCT...GCCTCCTCCTACTGTGTAGGAGCCCCCTGCTTCCCAATACAGCCGTGTCCCCAA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000090821.10 ENSMUST00000090823.8 ENSMUST00000107217.6 ENSMUST00000168321.8 |
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| CDS-3UTR CAA 90 bp | CCAATTGCTCCGGAGAGACTTGGGGGCCGAGCTGCAGTGGAGGCCGACTTTCAGAGCACTGTCCCATCGTaGGAGCCAAGAAACAGGACA | + |
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Preference number: 5 (lower is better) Translates to: PIAPERLGGRAAVEADFQSTVPS*EPRNRT Trigger: TGTCCTGTTTCTTGGCTCCAACGATGGGACAGTGCT...CTGAAAGTCGGCCTCCACTGCAGCTCGGCCCCCAAGTCTCTCCGGAGCAATTGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000090821.10 ENSMUST00000090823.8 ENSMUST00000107217.6 ENSMUST00000168321.8 |
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| CDS-3UTR CAA 90 bp | AGGAAACCTTTCCTGATTAACCCCGGTGGGACACCCGCCAAGCCAATTGCTCCGAGACTGGGGCCCTTGTaGGGCATCACTGGGGGAACT | + |
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Preference number: 5 (lower is better) Translates to: RKPFLINPGGTPAKPIAPRLGPL*GITGGT Trigger: AGTTCCCCCAGTGATGCCCAACAAGGGCCCCAGTCT...CGGAGCAATTGGCTTGGCGGGTGTCCCACCGGGGTTAATCAGGAAAGGTTTCCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000090823.8 ENSMUST00000107217.6 ENSMUST00000168321.8 |
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| CDS TCA 90 bp | AAACGGGCAGCCACAAGCAAGGTCCGGTTCAAGGTCAGGAATCTCTaGAAGTCCAGCCCAAGTTCCGCAGCCACAGCATCGTCCTCCAGG | + |
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Preference number: 5 (lower is better) Translates to: KRAATSKVRFKVRNL*KSSPSSAATASSSR Trigger: CCTGGAGGACGATGCTGTGGCTGCGGAACTTGGGCTGGACTTTCAGAGATTCCTGACCTTGAACCGGACCTTGCTTGTGGCTGCCCGTTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131620.8 |
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| CDS-3UTR CAA 90 bp | GCCCCGGCTCAGCCCACACACACCAGGTCTTTGATTGCCTCCTTCAGGAAACCTCCCCTCCCCTTCTTCTaGGGCTTGAAGATCGAAGGA | + |
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Preference number: 5 (lower is better) Translates to: APAQPTHTRSLIASFRKPPLPFF*GLKIEG Trigger: TCCTTCGATCTTCAAGCCCAAGAAGAAGGGGAGGGG...AGGTTTCCTGAAGGAGGCAATCAAAGACCTGGTGTGTGTGGGCTGAGCCGGGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000090821.10 ENSMUST00000090823.8 ENSMUST00000107217.6 ENSMUST00000142449.9 |
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| CDS-3UTR CAA 90 bp | TTGGGGACACGGCTGTATTGGGAAGCAGGGGGCTCCTACACAGTAGGAGGAGGCCTCTGCTCCTTGAACTaGCCCTCAAAGCCACGTTCA | + |
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Preference number: 5 (lower is better) Translates to: LGTRLYWEAGGSYTVGGGLCSLN*PSKPRS Trigger: TGAACGTGGCTTTGAGGGCAAGTTCAAGGAGCAGAG...GCCTCCTCCTACTGTGTAGGAGCCCCCTGCTTCCCAATACAGCCGTGTCCCCAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000090821.10 ENSMUST00000090823.8 ENSMUST00000107217.6 ENSMUST00000168321.8 |
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| CDS-3UTR CAA 90 bp | GGCTTGGGGACACGGCTGTATTGGGAAGCAGGGGGCTCCTACACAGTAGGAGGAAGACTCCTCTGCTCCTaGAACTTGCCCTCAAAGCCA | + |
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Preference number: 5 (lower is better) Translates to: GLGTRLYWEAGGSYTVGGRLLCS*NLPSKP Trigger: TGGCTTTGAGGGCAAGTTCAAGGAGCAGAGGAGTCT...TCCTCCTACTGTGTAGGAGCCCCCTGCTTCCCAATACAGCCGTGTCCCCAAGCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000090821.10 ENSMUST00000090823.8 ENSMUST00000107217.6 ENSMUST00000168321.8 |
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| CDS-3UTR CAA 90 bp | GGCTTGGGGACACGGCTGTATTGGGAAGCAGGGGGCTCCTACACAGTAGGAGGAAGCACTGTCCCATCGTaGGAGCCAAGAAACAGGACA | + |
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Preference number: 5 (lower is better) Translates to: GLGTRLYWEAGGSYTVGGSTVPS*EPRNRT Trigger: TGTCCTGTTTCTTGGCTCCAACGATGGGACAGTGCT...TCCTCCTACTGTGTAGGAGCCCCCTGCTTCCCAATACAGCCGTGTCCCCAAGCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000090821.10 ENSMUST00000090823.8 ENSMUST00000107217.6 ENSMUST00000168321.8 |
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| CDS-3UTR CAA 90 bp | TTCCCTCTCCCACCCCAGAGTGTAGGCCGTGGAAAGGTGCCTGACCTCTATCCACTCTGCTCCTTGAACTaGCCCTCAAAGCCACGTTCA | + |
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Preference number: 5 (lower is better) Translates to: FPLPPQSVGRGKVPDLYPLCSLN*PSKPRS Trigger: TGAACGTGGCTTTGAGGGCAAGTTCAAGGAGCAGAG...TGGATAGAGGTCAGGCACCTTTCCACGGCCTACACTCTGGGGTGGGAGAGGGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000090821.10 ENSMUST00000090823.8 ENSMUST00000107217.6 |
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| CDS-3UTR CAA 90 bp | GGCTTGGGGACACGGCTGTATTGGGAAGCAGGGGGCTCCTACACAGTAGGAGGACCCTTCTTCTTGGGCTaGAAGATCGAAGGAGAAAAC | + |
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Preference number: 5 (lower is better) Translates to: GLGTRLYWEAGGSYTVGGPFFLG*KIEGEN Trigger: GTTTTCTCCTTCGATCTTCAAGCCCAAGAAGAAGGG...TCCTCCTACTGTGTAGGAGCCCCCTGCTTCCCAATACAGCCGTGTCCCCAAGCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000090821.10 ENSMUST00000090823.8 ENSMUST00000107217.6 ENSMUST00000142449.9 ENSMUST00000168321.8 |
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| CDS-3UTR CAA 90 bp | CCGCGAGGAAAGTCAGGCAGCGGCTTGGGGACACGGCTGTATTGGGAAGCAGGGACAGTTCTCCATATCTaGACTCCTCCATGTCAGAAA | + |
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Preference number: 5 (lower is better) Translates to: PRGKSGSGLGTRLYWEAGTVLHI*TPPCQK Trigger: TTTCTGACATGGAGGAGTCAAGATATGGAGAACTGT...CCCTGCTTCCCAATACAGCCGTGTCCCCAAGCCGCTGCCTGACTTTCCTCGCGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000090821.10 ENSMUST00000090823.8 ENSMUST00000107217.6 ENSMUST00000142449.9 ENSMUST00000168321.8 |
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| CDS-3UTR CAA 90 bp | TGGCGCTCCGAGGGGCGAGTTCCTCGCCAAAGGACAGGGGAAAGACAAGTCAATCCCTTCTTCTTGGGCTaGAAGATCGAAGGAGAAAAC | + |
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Preference number: 5 (lower is better) Translates to: WRSEGRVPRQRTGERQVNPFFLG*KIEGEN Trigger: GTTTTCTCCTTCGATCTTCAAGCCCAAGAAGAAGGG...ATTGACTTGTCTTTCCCCTGTCCTTTGGCGAGGAACTCGCCCCTCGGAGCGCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 6 transcripts: ENSMUST00000090821.10 ENSMUST00000090823.8 ENSMUST00000107217.6 ENSMUST00000142449.9 ENSMUST00000168321.8 ENSMUST00000204709.3 |
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| CDS-3UTR CAA 90 bp | CGGCACATAGGGCTGAAGGAATTTGTTCCACAGGCAAGAAGTGTCTGCGAGTTCCATGTCAGAAACTTGTaGGGCACCAGCCCCTCCCCT | + |
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Preference number: 5 (lower is better) Translates to: RHIGLKEFVPQARSVCEFHVRNL*GTSPSP Trigger: AGGGGAGGGGCTGGTGCCCAACAAGTTTCTGACATG...GAACTCGCAGACACTTCTTGCCTGTGGAACAAATTCCTTCAGCCCTATGTGCCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000142449.9 ENSMUST00000204709.3 |
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| CDS-3UTR CAA 90 bp | AGATGTTATCCCATAGCTGCGGCACATAGGGCTGAAGGAATTTGTTCCACAGGCCATGTCAGAAACTTGTaGGGCACCAGCCCCTCCCCT | + |
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Preference number: 5 (lower is better) Translates to: RCYPIAAAHRAEGICSTGHVRNL*GTSPSP Trigger: AGGGGAGGGGCTGGTGCCCAACAAGTTTCTGACATG...GCCTGTGGAACAAATTCCTTCAGCCCTATGTGCCGCAGCTATGGGATAACATCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000142449.9 ENSMUST00000204709.3 |
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| CDS-3UTR CAA 90 bp | GCACATAGGGCTGAAGGAATTTGTTCCACAGGCAAGAAGTGTCTGCGAGTTCCACTCCATGTCAGAAACTaGTTGGGCACCAGCCCCTCC | + |
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Preference number: 5 (lower is better) Translates to: AHRAEGICSTGKKCLRVPLHVRN*LGTSPS Trigger: GGAGGGGCTGGTGCCCAACAAGTTTCTGACATGGAG...TGGAACTCGCAGACACTTCTTGCCTGTGGAACAAATTCCTTCAGCCCTATGTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000142449.9 ENSMUST00000204709.3 |
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| CDS-3UTR CAA 90 bp | AGGAAACCTTTCCTGATTAACCCCGGTGGGACACCCGCCAAGCCAATTGCTCCGACAGTTCTCCATATCTaGACTCCTCCATGTCAGAAA | + |
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Preference number: 5 (lower is better) Translates to: RKPFLINPGGTPAKPIAPTVLHI*TPPCQK Trigger: TTTCTGACATGGAGGAGTCAAGATATGGAGAACTGT...CGGAGCAATTGGCTTGGCGGGTGTCCCACCGGGGTTAATCAGGAAAGGTTTCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000090821.10 ENSMUST00000090823.8 ENSMUST00000107217.6 ENSMUST00000142449.9 ENSMUST00000168321.8 |
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| CDS CCA 72 bp | AGTGTGGCTCTGCAAAGATGGCCACAGTGGACTGGGTaGCATCAAAGGGGCATCGAGCCTGCCCACTCAGCT | + |
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Preference number: 6 (lower is better) Translates to: SVALQRWPQWTG*HQRGIEPAHSA Trigger: AGCTGAGTGGGCAGGCTCGATGCCCCTTTGATGCCACCCAGTCCACTGTGGCCATCTTTGCAGAGCCACACT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107217.6 |
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| CDS TCA 72 bp | GCCACAAGCAAGGTCCGGTTCAAGGTCAGGAATCTCTaGAAGTCCAGCCCAAGTTCCGCAGCCACAGCATCG | + |
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Preference number: 6 (lower is better) Translates to: ATSKVRFKVRNL*KSSPSSAATAS Trigger: CGATGCTGTGGCTGCGGAACTTGGGCTGGACTTTCAGAGATTCCTGACCTTGAACCGGACCTTGCTTGTGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENSMUST00000090821.10 ENSMUST00000090823.8 ENSMUST00000107217.6 ENSMUST00000131620.8 ENSMUST00000142449.9 ENSMUST00000168321.8 ENSMUST00000202315.3 ENSMUST00000204709.3 |
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| CDS CCA 72 bp | CATAGACAAAGTGTGGCTCTGCAAAGATGGCCACAGTaGACTGGGTGGCATCAAAGGGGCATCGAGCCTGCC | + |
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Preference number: 6 (lower is better) Translates to: HRQSVALQRWPQ*TGWHQRGIEPA Trigger: GGCAGGCTCGATGCCCCTTTGATGCCACCCAGTCCACTGTGGCCATCTTTGCAGAGCCACACTTTGTCTATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107217.6 |
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| CDS TCA 72 bp | GTCAGCTTTCCCCGGACTGCACAGTTCTCCATATCTTaGCTCCTCCATGTCAGAAACTTGTTGGGCACCAGC | + |
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Preference number: 6 (lower is better) Translates to: VSFPRTAQFSIS*LLHVRNLLGTS Trigger: GCTGGTGCCCAACAAGTTTCTGACATGGAGGAGTCAAGATATGGAGAACTGTGCAGTCCGGGGAAAGCTGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000090821.10 ENSMUST00000090823.8 ENSMUST00000107217.6 ENSMUST00000142449.9 ENSMUST00000168321.8 ENSMUST00000202315.3 ENSMUST00000204709.3 |
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| CDS CAA 72 bp | CGTCAGCTTTCCCCGGACTGCACAGTTCTCCATATCTaGACTCCTCCATGTCAGAAACTTGTTGGGCACCAG | + |
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Preference number: 6 (lower is better) Translates to: RQLSPDCTVLHI*TPPCQKLVGHQ Trigger: CTGGTGCCCAACAAGTTTCTGACATGGAGGAGTCAAGATATGGAGAACTGTGCAGTCCGGGGAAAGCTGACG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000090821.10 ENSMUST00000090823.8 ENSMUST00000107217.6 ENSMUST00000142449.9 ENSMUST00000168321.8 ENSMUST00000202315.3 ENSMUST00000204709.3 |
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