RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SEMA5A (Mus musculus)

Ensembl gene IDs: ENSMUSG00000022231

Ensembl transcript IDs: ENSMUST00000067458.7

Found 376 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GCAGAAGTGGGACTCAGTAAGCCGGAGGACAAGGAAGGCAGCAACTaGGGTAAAGCACACCAGAGCCTTTCCCTCCTCTGGTCTTGGGGC +
Preference number: 1 (lower is better)
Translates to: AEVGLSKPEDKEGSN*GKAHQSLSLLWSWG
Trigger: GCCCCAAGACCAGAGGAGGGAAAGGCTCTGGTGTGCTTTACCTCAGTTGCTGCCTTCCTTGTCCTCCGGCTTACTGAGTCCCACTTCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
3UTR CCA 90 bp GGAGGGAGGGAGGAAAGGGTGTGGAGTCTACCCAAATGCTCAGAGTaGCTCTTCAGCCAGGAAGCTCACTGTCTGGGAAGTTGGTCTTCA +
Preference number: 1 (lower is better)
Translates to: GGREERVWSLPKCSE*LFSQEAHCLGSWSS
Trigger: TGAAGACCAACTTCCCAGACAGTGAGCTTCCTGGCTGAAGAGCCACTCTGAGCATTTGGGTAGACTCCACACCCTTTCCTCCCTCCCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
3UTR GCA 90 bp GCTGCTCTCTGCTTCATGTGTTCACCAAACAGTGATGACAGTCACTaGCCCAGACCAAAGCAGCGGGTCTCAGTAGACCACGACTTGGTG +
Preference number: 1 (lower is better)
Translates to: AALCFMCSPNSDDSH*PRPKQRVSVDHDLV
Trigger: CACCAAGTCGTGGTCTACTGAGACCCGCTGCTTTGGTCTGGGGCAGTGACTGTCATCACTGTTTGGTGAACACATGAAGCAGAGAGCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
3UTR GCA 90 bp GTCTTGGGGCAGCAGGGGACAAATGAGGAGAGCATGGTACTGGAGTaGCACTCCAGTGTGACTGCAAGGAGGAACAGCTTTACACACCTT +
Preference number: 1 (lower is better)
Translates to: VLGQQGTNEESMVLE*HSSVTARRNSFTHL
Trigger: AAGGTGTGTAAAGCTGTTCCTCCTTGCAGTCACACTGGAGTGGCACTCCAGTACCATGCTCTCCTCATTTGTCCCCTGCTGCCCCAAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
3UTR GCA 90 bp TGTGTTTGTGTTGTGCCAGTGAAAGGTCTGGAGTGTGGCATACACTaGACCAGGGGCCGCAGCTGTACACCTACAGAAAATAAGCCACAC +
Preference number: 1 (lower is better)
Translates to: CVCVVPVKGLECGIH*TRGRSCTPTENKPH
Trigger: GTGTGGCTTATTTTCTGTAGGTGTACAGCTGCGGCCCCTGGTGCAGTGTATGCCACACTCCAGACCTTTCACTGGCACAACACAAACACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
3UTR CCA 90 bp ATGGTATGCATGTGTTTGTGTTGTGCCAGTGAAAGGTCTGGAGTGTaGCATACACTGCACCAGGGGCCGCAGCTGTACACCTACAGAAAA +
Preference number: 1 (lower is better)
Translates to: MVCMCLCCASERSGV*HTLHQGPQLYTYRK
Trigger: TTTTCTGTAGGTGTACAGCTGCGGCCCCTGGTGCAGTGTATGCCACACTCCAGACCTTTCACTGGCACAACACAAACACATGCATACCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
3UTR GCA 90 bp ACTGCAAGCTGTAGAACACTGTTGTGTGTCTCACTCGCTGCTCTCTaGTTCATGTGTTCACCAAACAGTGATGACAGTCACTGCCCCAGA +
Preference number: 1 (lower is better)
Translates to: TASCRTLLCVSLAAL*FMCSPNSDDSHCPR
Trigger: TCTGGGGCAGTGACTGTCATCACTGTTTGGTGAACACATGAAGCAGAGAGCAGCGAGTGAGACACACAACAGTGTTCTACAGCTTGCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
3UTR CCA 90 bp GCACTTGAAATGGTTCCACACGTCATCTCTGAAGCCTCAGAAATATaGGCAGCCATGGAGCACGGTTTTGAGGAGCAGCGAGTTTACAAC +
Preference number: 1 (lower is better)
Translates to: ALEMVPHVISEASEI*AAMEHGFEEQRVYN
Trigger: GTTGTAAACTCGCTGCTCCTCAAAACCGTGCTCCATGGCTGCCCATATTTCTGAGGCTTCAGAGATGACGTGTGGAACCATTTCAAGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
3UTR GCA 90 bp CAAGTGGTCACAGGTTCTGCAGAATCTTACACTGGGAAAAGCTGGTaGATCTTATTGGCAGATGAGGTGAGCATCATGGTGATTCAGTGG +
Preference number: 1 (lower is better)
Translates to: QVVTGSAESYTGKSW*ILLADEVSIMVIQW
Trigger: CCACTGAATCACCATGATGCTCACCTCATCTGCCAATAAGATGCACCAGCTTTTCCCAGTGTAAGATTCTGCAGAACCTGTGACCACTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
3UTR GCA 90 bp GGAAGCGTAGCAGGTGTCAAGTCAAAACCAAGTGGTCACAGGTTCTaGAGAATCTTACACTGGGAAAAGCTGGTGCATCTTATTGGCAGA +
Preference number: 1 (lower is better)
Translates to: GSVAGVKSKPSGHRF*RILHWEKLVHLIGR
Trigger: TCTGCCAATAAGATGCACCAGCTTTTCCCAGTGTAAGATTCTGCAGAACCTGTGACCACTTGGTTTTGACTTGACACCTGCTACGCTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
3UTR TCA 90 bp TGCAGAATCTTACACTGGGAAAAGCTGGTGCATCTTATTGGCAGATaGGGTGAGCATCATGGTGATTCAGTGGTTGGAGAATCCCACTGT +
Preference number: 1 (lower is better)
Translates to: CRILHWEKLVHLIGR*GEHHGDSVVGESHC
Trigger: ACAGTGGGATTCTCCAACCACTGAATCACCATGATGCTCACCTCATCTGCCAATAAGATGCACCAGCTTTTCCCAGTGTAAGATTCTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
3UTR CCA 90 bp AACCAAGTGGTCACAGGTTCTGCAGAATCTTACACTGGGAAAAGCTaGTGCATCTTATTGGCAGATGAGGTGAGCATCATGGTGATTCAG +
Preference number: 1 (lower is better)
Translates to: NQVVTGSAESYTGKS*CILLADEVSIMVIQ
Trigger: CTGAATCACCATGATGCTCACCTCATCTGCCAATAAGATGCACCAGCTTTTCCCAGTGTAAGATTCTGCAGAACCTGTGACCACTTGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
3UTR GCA 90 bp GCACCAGGCTCTGAATTTGGTATCCAGGAGACTGCATACAGTCTTTaGAGTCTGAGCTATTTTAAGAGACAGGTTTCCATGTTGCTTCAG +
Preference number: 1 (lower is better)
Translates to: APGSEFGIQETAYSL*SLSYFKRQVSMLLQ
Trigger: CTGAAGCAACATGGAAACCTGTCTCTTAAAATAGCTCAGACTGCAAAGACTGTATGCAGTCTCCTGGATACCAAATTCAGAGCCTGGTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
3UTR TCA 90 bp CCTGGCCAGCTCTCAGGAAGAATATCAATCCAGTGGGTTAATGAGTaGAACAGAAAAATGATAGCTTCAGAAAATACCAATGCACATGGC +
Preference number: 1 (lower is better)
Translates to: PGQLSGRISIQWVNE*NRKMIASENTNAHG
Trigger: GCCATGTGCATTGGTATTTTCTGAAGCTATCATTTTTCTGTTTCACTCATTAACCCACTGGATTGATATTCTTCCTGAGAGCTGGCCAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
3UTR CCA 90 bp CAAGACCTGATTCTATCAATGATTAAGGTGGAACATTTGCTGACATaGGGGTCAGTCAACACTGGCAGTTTTCATTCCTTTGTAGATAAA +
Preference number: 1 (lower is better)
Translates to: QDLILSMIKVEHLLT*GSVNTGSFHSFVDK
Trigger: TTTATCTACAAAGGAATGAAAACTGCCAGTGTTGACTGACCCCCATGTCAGCAAATGTTCCACCTTAATCATTGATAGAATCAGGTCTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
3UTR GCA 90 bp GATCAGTTTAGTTACATGTACAGTATGTTCCCAGTAAAGCATTTCTaGTTGGGAACAGAGTTGATAAAGGCTCTGGTCATGGATAATAAG +
Preference number: 1 (lower is better)
Translates to: DQFSYMYSMFPVKHF*LGTELIKALVMDNK
Trigger: CTTATTATCCATGACCAGAGCCTTTATCAACTCTGTTCCCAAGCAGAAATGCTTTACTGGGAACATACTGTACATGTAACTAAACTGATC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
3UTR TCA 90 bp ATAATGTCCCACTCCAATATTCCCATATGCCATTTCTTCACAATCTaGCACATCTCCCAGAGCCCATCTGCTGTTTTAATTTCAATTTTA +
Preference number: 1 (lower is better)
Translates to: IMSHSNIPICHFFTI*HISQSPSAVLISIL
Trigger: TAAAATTGAAATTAAAACAGCAGATGGGCTCTGGGAGATGTGTCAGATTGTGAAGAAATGGCATATGGGAATATTGGAGTGGGACATTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
3UTR TCA 90 bp AGGTCATTTAGAAAGCATTTCCTATCAAGTGTAGCCATACGTTCTTaGAATATTTGTACTCTTTTTCCGAGGGGAAAGAGAGTGACCTTT +
Preference number: 1 (lower is better)
Translates to: RSFRKHFLSSVAIRS*NICTLFPRGKRVTF
Trigger: AAAGGTCACTCTCTTTCCCCTCGGAAAAAGAGTACAAATATTTCAAGAACGTATGGCTACACTTGATAGGAAATGCTTTCTAAATGACCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
3UTR GCA 90 bp TTATGGCTTCTCTTCAATTCCTTTAGTGTCTCTGTCATTCCATCATaGACTCAAGAAACCCTCTTCTCTTCCATCAACATACATGTTAAT +
Preference number: 1 (lower is better)
Translates to: LWLLFNSFSVSVIPS*TQETLFSSINIHVN
Trigger: ATTAACATGTATGTTGATGGAAGAGAAGAGGGTTTCTTGAGTGCATGATGGAATGACAGAGACACTAAAGGAATTGAAGAGAAGCCATAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
3UTR-3UTR CCA 90 bp AGGTCTGGAGTGTGGCATACACTGCACCAGGGGCCGCAGCTGTACACCTACAGATTCAGGCTCACAGCGTaGCAAGGAGCTTCCTGGGAT +
Preference number: 2 (lower is better)
Translates to: RSGVWHTLHQGPQLYTYRFRLTA*QGASWD
Trigger: ATCCCAGGAAGCTCCTTGCCACGCTGTGAGCCTGAA...TCTGTAGGTGTACAGCTGCGGCCCCTGGTGCAGTGTATGCCACACTCCAGACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
3UTR-3UTR CCA 90 bp AGGTCTGGAGTGTGGCATACACTGCACCAGGGGCCGCAGCTGTACACCTACAGAGAAGCCTCAGAAATATaGGCAGCCATGGAGCACGGT +
Preference number: 2 (lower is better)
Translates to: RSGVWHTLHQGPQLYTYREASEI*AAMEHG
Trigger: ACCGTGCTCCATGGCTGCCCATATTTCTGAGGCTTC...TCTGTAGGTGTACAGCTGCGGCCCCTGGTGCAGTGTATGCCACACTCCAGACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
3UTR-3UTR CCA 90 bp AGGTCTGGAGTGTGGCATACACTGCACCAGGGGCCGCAGCTGTACACCTACAGATGGCAAGGAGCTTCCTaGGATGACATGGAATCCAAA +
Preference number: 2 (lower is better)
Translates to: RSGVWHTLHQGPQLYTYRWQGAS*DDMESK
Trigger: TTTGGATTCCATGTCATCCCAGGAAGCTCCTTGCCA...TCTGTAGGTGTACAGCTGCGGCCCCTGGTGCAGTGTATGCCACACTCCAGACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
3UTR-3UTR CCA 90 bp ATACTCACTAGCCAGCAGCAGTCCCACACAGAACCAAGTGGCTGTTCTTTCAGATCCCTCCTCTGGTCTTaGGGCAGCAGGGGACAAATG +
Preference number: 2 (lower is better)
Translates to: ILTSQQQSHTEPSGCSFRSLLWS*GSRGQM
Trigger: CATTTGTCCCCTGCTGCCCCAAGACCAGAGGAGGGA...TCTGAAAGAACAGCCACTTGGTTCTGTGTGGGACTGCTGCTGGCTAGTGAGTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
3UTR-3UTR TCA 90 bp GTCAACAGGGTCCAGATCAAACACATGGATTGGTCCTTCCTAGGGACAGAGACAAGTGCCACTCCAGTGTaGCTGCAAGGAGGAACAGCT +
Preference number: 2 (lower is better)
Translates to: VNRVQIKHMDWSFLGTETSATPV*LQGGTA
Trigger: AGCTGTTCCTCCTTGCAGTCACACTGGAGTGGCACT...TGTCTCTGTCCCTAGGAAGGACCAATCCATGTGTTTGATCTGGACCCTGTTGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
3UTR-3UTR CCA 90 bp ATACTCACTAGCCAGCAGCAGTCCCACACAGAACCAAGTGGCTGTTCTTTCAGACCCAAATGCTCAGAGTaGCTCTTCAGCCAGGAAGCT +
Preference number: 2 (lower is better)
Translates to: ILTSQQQSHTEPSGCSFRPKCSE*LFSQEA
Trigger: AGCTTCCTGGCTGAAGAGCCACTCTGAGCATTTGGG...TCTGAAAGAACAGCCACTTGGTTCTGTGTGGGACTGCTGCTGGCTAGTGAGTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
3UTR-3UTR TCA 90 bp AGGTCTGGAGTGTGGCATACACTGCACCAGGGGCCGCAGCTGTACACCTACAGAAAGAAAGTAATGAGATaGGTTGAAGCAGCCACTAAA +
Preference number: 2 (lower is better)
Translates to: RSGVWHTLHQGPQLYTYRKKVMR*VEAATK
Trigger: TTTAGTGGCTGCTTCAACTCATCTCATTACTTTCTT...TCTGTAGGTGTACAGCTGCGGCCCCTGGTGCAGTGTATGCCACACTCCAGACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
3UTR-3UTR GCA 90 bp CTCTCATTTCCTGTTCCTGAGTTCAAAGAGACGACACACAGAATAGATTTCCTCGAGTGTGGCATACACTaGACCAGGGGCCGCAGCTGT +
Preference number: 2 (lower is better)
Translates to: LSFPVPEFKETTHRIDFLECGIH*TRGRSC
Trigger: ACAGCTGCGGCCCCTGGTGCAGTGTATGCCACACTC...GAGGAAATCTATTCTGTGTGTCGTCTCTTTGAACTCAGGAACAGGAAATGAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
3UTR CAA 90 bp CAGTGTGACTGCAAGGAGGAACAGCTTTACACACCTTTAATGCTCTaGATAGGGGCCTTGCTGCACATTAGCCACATCAGAGATGCTGAG +
Preference number: 2 (lower is better)
Translates to: QCDCKEEQLYTPLML*IGALLHISHIRDAE
Trigger: CTCAGCATCTCTGATGTGGCTAATGTGCAGCAAGGCCCCTATCAAGAGCATTAAAGGTGTGTAAAGCTGTTCCTCCTTGCAGTCACACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
3UTR-3UTR TCA 90 bp AGGGCAAATACTGACAGCCAAACACAGGGGCTTAATAGTGTGGCTTGCCTATTGTTTGTGTTGTGCCAGTaGAAGGTCTGGAGTGTGGCA +
Preference number: 2 (lower is better)
Translates to: RANTDSQTQGLNSVACLLFVLCQ*KVWSVA
Trigger: TGCCACACTCCAGACCTTTCACTGGCACAACACAAA...CAATAGGCAAGCCACACTATTAAGCCCCTGTGTTTGGCTGTCAGTATTTGCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
3UTR-3UTR TCA 90 bp ATACTCACTAGCCAGCAGCAGTCCCACACAGAACCAAGTGGCTGTTCTTTCAGAGGTACTAAGGTGCTATaGGTAAGTCTTAAGGGGCAG +
Preference number: 2 (lower is better)
Translates to: ILTSQQQSHTEPSGCSFRGTKVL*VSLKGQ
Trigger: CTGCCCCTTAAGACTTACTCATAGCACCTTAGTACC...TCTGAAAGAACAGCCACTTGGTTCTGTGTGGGACTGCTGCTGGCTAGTGAGTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
3UTR-3UTR TCA 90 bp GTCAACAGGGTCCAGATCAAACACATGGATTGGTCCTTCCTAGGGACAGAGACAATTCAACCATTAGGATaGGAGAGGAGGGTCACTGAA +
Preference number: 2 (lower is better)
Translates to: VNRVQIKHMDWSFLGTETIQPLG*ERRVTE
Trigger: TTCAGTGACCCTCCTCTCTCATCCTAATGGTTGAAT...TGTCTCTGTCCCTAGGAAGGACCAATCCATGTGTTTGATCTGGACCCTGTTGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
3UTR-3UTR GCA 90 bp ATACTCACTAGCCAGCAGCAGTCCCACACAGAACCAAGTGGCTGTTCTTTCAGAATTACCAGTAGGCTGTaGTTAGGCAAACTGACAGAG +
Preference number: 2 (lower is better)
Translates to: ILTSQQQSHTEPSGCSFRITSRL*LGKLTE
Trigger: CTCTGTCAGTTTGCCTAAGCACAGCCTACTGGTAAT...TCTGAAAGAACAGCCACTTGGTTCTGTGTGGGACTGCTGCTGGCTAGTGAGTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
3UTR-3UTR CCA 90 bp ATACTCACTAGCCAGCAGCAGTCCCACACAGAACCAAGTGGCTGTTCTTTCAGAACAATCCCTAGGCCCTaGACTGTAATCTCTCATACA +
Preference number: 2 (lower is better)
Translates to: ILTSQQQSHTEPSGCSFRTIPRP*TVISHT
Trigger: TGTATGAGAGATTACAGTCCAGGGCCTAGGGATTGT...TCTGAAAGAACAGCCACTTGGTTCTGTGTGGGACTGCTGCTGGCTAGTGAGTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
3UTR-3UTR TCA 90 bp AAATTTGAGGTAAGGGCCTGGCCAGCTCTCAGGAAGAATATCAATCCAGTGGGTACAGAGGTTTTTCTGTaGAGCAGAGCTTCACCCAAT +
Preference number: 2 (lower is better)
Translates to: KFEVRAWPALRKNINPVGTEVFL*SRASPN
Trigger: ATTGGGTGAAGCTCTGCTTCACAGAAAAACCTCTGT...ACCCACTGGATTGATATTCTTCCTGAGAGCTGGCCAGGCCCTTACCTCAAATTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
3UTR-3UTR GCA 90 bp AAATTTGAGGTAAGGGCCTGGCCAGCTCTCAGGAAGAATATCAATCCAGTGGGTACTGGGAAAAGCTGGTaGATCTTATTGGCAGATGAG +
Preference number: 2 (lower is better)
Translates to: KFEVRAWPALRKNINPVGTGKSW*ILLADE
Trigger: CTCATCTGCCAATAAGATGCACCAGCTTTTCCCAGT...ACCCACTGGATTGATATTCTTCCTGAGAGCTGGCCAGGCCCTTACCTCAAATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
3UTR-3UTR TCA 90 bp CTCTCATTTCCTGTTCCTGAGTTCAAAGAGACGACACACAGAATAGATTTCCTCTCCACACGTCATCTCTaGAGCCTCAGAAATATGGGC +
Preference number: 2 (lower is better)
Translates to: LSFPVPEFKETTHRIDFLSTRHL*SLRNMG
Trigger: GCCCATATTTCTGAGGCTTCAGAGATGACGTGTGGA...GAGGAAATCTATTCTGTGTGTCGTCTCTTTGAACTCAGGAACAGGAAATGAGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
3UTR-3UTR TCA 90 bp ATACTCACTAGCCAGCAGCAGTCCCACACAGAACCAAGTGGCTGTTCTTTCAGACAAGTTAAAACATCCTaGTCCTCTACACTCAAAAGC +
Preference number: 2 (lower is better)
Translates to: ILTSQQQSHTEPSGCSFRQVKTS*SSTLKS
Trigger: GCTTTTGAGTGTAGAGGATCAGGATGTTTTAACTTG...TCTGAAAGAACAGCCACTTGGTTCTGTGTGGGACTGCTGCTGGCTAGTGAGTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
3UTR-3UTR TCA 90 bp ATACTCACTAGCCAGCAGCAGTCCCACACAGAACCAAGTGGCTGTTCTTTCAGAAATTGCCTACAGTATTaGAGGCAAGACCTGATTCTA +
Preference number: 2 (lower is better)
Translates to: ILTSQQQSHTEPSGCSFRNCLQY*RQDLIL
Trigger: TAGAATCAGGTCTTGCCTTCAATACTGTAGGCAATT...TCTGAAAGAACAGCCACTTGGTTCTGTGTGGGACTGCTGCTGGCTAGTGAGTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
3UTR-3UTR GCA 90 bp ATACTCACTAGCCAGCAGCAGTCCCACACAGAACCAAGTGGCTGTTCTTTCAGAAAAAAGTGTGTGAAATaGCACATAATGTCCCACTCC +
Preference number: 2 (lower is better)
Translates to: ILTSQQQSHTEPSGCSFRKKCVK*HIMSHS
Trigger: GGAGTGGGACATTATGTGGCATTTCACACACTTTTT...TCTGAAAGAACAGCCACTTGGTTCTGTGTGGGACTGCTGCTGGCTAGTGAGTAT
46% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
3UTR-3UTR CCA 90 bp CTCTCATTTCCTGTTCCTGAGTTCAAAGAGACGACACACAGAATAGATTTCCTCAGGGAGGAAAGGGTGTaGAGTCTACCCAAATGCTCA +
Preference number: 2 (lower is better)
Translates to: LSFPVPEFKETTHRIDFLREERV*SLPKCS
Trigger: TGAGCATTTGGGTAGACTCCACACCCTTTCCTCCCT...GAGGAAATCTATTCTGTGTGTCGTCTCTTTGAACTCAGGAACAGGAAATGAGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
3UTR CAA 90 bp AAAAGTCAGAGTAAGGTTAGTTTCACTGCAAGCTGTAGAACACTGTaGTGTGTCTCACTCGCTGCTCTCTGCTTCATGTGTTCACCAAAC +
Preference number: 2 (lower is better)
Translates to: KSQSKVSFTASCRTL*CVSLAALCFMCSPN
Trigger: GTTTGGTGAACACATGAAGCAGAGAGCAGCGAGTGAGACACACAACAGTGTTCTACAGCTTGCAGTGAAACTAACCTTACTCTGACTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
3UTR CAA 90 bp AAGGAGGAACAGCTTTACACACCTTTAATGCTCTTGATAGGGGCCTaGCTGCACATTAGCCACATCAGAGATGCTGAGTACAAAAGAAAG +
Preference number: 2 (lower is better)
Translates to: KEEQLYTPLMLLIGA*LHISHIRDAEYKRK
Trigger: CTTTCTTTTGTACTCAGCATCTCTGATGTGGCTAATGTGCAGCAAGGCCCCTATCAAGAGCATTAAAGGTGTGTAAAGCTGTTCCTCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
3UTR CAA 90 bp GAAAAGCAGAATATAGCTCAAGGCATTCCTAAGGAATTGCTCCAATaGTTCAGCAAAATAAGAGAAAGGGACCCGTGGTGGTTGGAGGTG +
Preference number: 2 (lower is better)
Translates to: EKQNIAQGIPKELLQ*FSKIRERDPWWLEV
Trigger: CACCTCCAACCACCACGGGTCCCTTTCTCTTATTTTGCTGAACAATTGGAGCAATTCCTTAGGAATGCCTTGAGCTATATTCTGCTTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
3UTR CAA 90 bp CTTACAGGCTGGAACAGGGCCACTTCATCTGGACACAACACACTCTaGATCTGTTTTGAGAGCAAAACCACACTTGAACATGAGACATTT +
Preference number: 2 (lower is better)
Translates to: LTGWNRATSSGHNTL*ICFESKTTLEHETF
Trigger: AAATGTCTCATGTTCAAGTGTGGTTTTGCTCTCAAAACAGATCAAGAGTGTGTTGTGTCCAGATGAAGTGGCCCTGTTCCAGCCTGTAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
3UTR-3UTR CCA 90 bp GTCAACAGGGTCCAGATCAAACACATGGATTGGTCCTTCCTAGGGACAGAGACACAGCCATTCAGTTTATaGCTTCTCTTCAATTCCTTT +
Preference number: 2 (lower is better)
Translates to: VNRVQIKHMDWSFLGTETQPFSL*LLFNSF
Trigger: AAAGGAATTGAAGAGAAGCCATAAACTGAATGGCTG...TGTCTCTGTCCCTAGGAAGGACCAATCCATGTGTTTGATCTGGACCCTGTTGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
3UTR-3UTR TCA 90 bp TTGCACTGGATGGTTTTGAAGAAAAAGTCTAGGACTATGTTGACAGAGGTTTTTTTGGAGGTGGGGATTTaGACAGAGAAGGAGGCAGTC +
Preference number: 2 (lower is better)
Translates to: LHWMVLKKKSRTMLTEVFLEVGI*TEKEAV
Trigger: GACTGCCTCCTTCTCTGTTCAAATCCCCACCTCCAA...AAAAACCTCTGTCAACATAGTCCTAGACTTTTTCTTCAAAACCATCCAGTGCAA
43% GC, longest homopolymer 7 nt, total homopolymer stretches 20 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
3UTR-3UTR TCA 90 bp CTCTCATTTCCTGTTCCTGAGTTCAAAGAGACGACACACAGAATAGATTTCCTCTGCACCCAGGACACTTaGTTATGGATACGTCCAAAT +
Preference number: 2 (lower is better)
Translates to: LSFPVPEFKETTHRIDFLCTQDT*LWIRPN
Trigger: ATTTGGACGTATCCATAATCAAGTGTCCTGGGTGCA...GAGGAAATCTATTCTGTGTGTCGTCTCTTTGAACTCAGGAACAGGAAATGAGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
3UTR-3UTR TCA 90 bp TTCACAATATGTGTCACTGTAAGTAGCCTGCATCTGTTTCCCTCATACCTATGTCTACAGAAACAGAGCTaGCTCTCATACCACAGGACA +
Preference number: 2 (lower is better)
Translates to: FTICVTVSSLHLFPSYLCLQKQS*LSYHRT
Trigger: TGTCCTGTGGTATGAGAGTCAGCTCTGTTTCTGTAG...ACATAGGTATGAGGGAAACAGATGCAGGCTACTTACAGTGACACATATTGTGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
3UTR-3UTR GCA 90 bp AAATTTGAGGTAAGGGCCTGGCCAGCTCTCAGGAAGAATATCAATCCAGTGGGTGTGATTCCCTATTGCTaGTTTTGTCTTTCTGATCAA +
Preference number: 2 (lower is better)
Translates to: KFEVRAWPALRKNINPVGVIPYC*FCLSDQ
Trigger: TTGATCAGAAAGACAAAAGCAGCAATAGGGAATCAC...ACCCACTGGATTGATATTCTTCCTGAGAGCTGGCCAGGCCCTTACCTCAAATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
3UTR-3UTR CCA 90 bp TTGCACTGGATGGTTTTGAAGAAAAAGTCTAGGACTATGTTGACAGAGGTTTTTCGTGGTGGTTGGAGGTaGGGATTTGAACAGAGAAGG +
Preference number: 2 (lower is better)
Translates to: LHWMVLKKKSRTMLTEVFRGGWR*GFEQRR
Trigger: CCTTCTCTGTTCAAATCCCCACCTCCAACCACCACG...AAAAACCTCTGTCAACATAGTCCTAGACTTTTTCTTCAAAACCATCCAGTGCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
3UTR-3UTR CCA 90 bp AGGGCAAATACTGACAGCCAAACACAGGGGCTTAATAGTGTGGCTTGCCTATTGGGTACTAACAGGCTTTaGAATCTTGACAATAGTGTA +
Preference number: 2 (lower is better)
Translates to: RANTDSQTQGLNSVACLLGTNRL*NLDNSV
Trigger: TACACTATTGTCAAGATTCCAAAGCCTGTTAGTACC...CAATAGGCAAGCCACACTATTAAGCCCCTGTGTTTGGCTGTCAGTATTTGCCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
3UTR-3UTR TCA 90 bp TTCACAATATGTGTCACTGTAAGTAGCCTGCATCTGTTTCCCTCATACCTATGTCACACCTTCATTCTGTaGATTACTCTGGACTCTGTG +
Preference number: 2 (lower is better)
Translates to: FTICVTVSSLHLFPSYLCHTFIL*ITLDSV
Trigger: CACAGAGTCCAGAGTAATTCACAGAATGAAGGTGTG...ACATAGGTATGAGGGAAACAGATGCAGGCTACTTACAGTGACACATATTGTGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
3UTR-3UTR TCA 90 bp TTCACAATATGTGTCACTGTAAGTAGCCTGCATCTGTTTCCCTCATACCTATGTCTCATTTCCTGTTCCTaGGTTCAAAGAGACGACACA +
Preference number: 2 (lower is better)
Translates to: FTICVTVSSLHLFPSYLCLISCS*VQRDDT
Trigger: TGTGTCGTCTCTTTGAACTCAGGAACAGGAAATGAG...ACATAGGTATGAGGGAAACAGATGCAGGCTACTTACAGTGACACATATTGTGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
3UTR-3UTR GCA 90 bp CTCTCATTTCCTGTTCCTGAGTTCAAAGAGACGACACACAGAATAGATTTCCTCATAAGAACACATGAGTaGCTACCCAGGCCTTTATCA +
Preference number: 2 (lower is better)
Translates to: LSFPVPEFKETTHRIDFLIRTHE*LPRPLS
Trigger: TGATAAAGGCCTGGGTAGGCACTCATGTGTTCTTAT...GAGGAAATCTATTCTGTGTGTCGTCTCTTTGAACTCAGGAACAGGAAATGAGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
3UTR-3UTR GCA 90 bp CTCTCATTTCCTGTTCCTGAGTTCAAAGAGACGACACACAGAATAGATTTCCTCTATGCGTGTATGGTATaGATGTGTTTGTGTTGTGCC +
Preference number: 2 (lower is better)
Translates to: LSFPVPEFKETTHRIDFLYACMV*MCLCCA
Trigger: GGCACAACACAAACACATGCATACCATACACGCATA...GAGGAAATCTATTCTGTGTGTCGTCTCTTTGAACTCAGGAACAGGAAATGAGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
3UTR-3UTR GCA 90 bp AAATTTGAGGTAAGGGCCTGGCCAGCTCTCAGGAAGAATATCAATCCAGTGGGTTTAGTGATTCCCTATTaGTGCTTTTGTCTTTCTGAT +
Preference number: 2 (lower is better)
Translates to: KFEVRAWPALRKNINPVGLVIPY*CFCLSD
Trigger: ATCAGAAAGACAAAAGCAGCAATAGGGAATCACTAA...ACCCACTGGATTGATATTCTTCCTGAGAGCTGGCCAGGCCCTTACCTCAAATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
3UTR-3UTR TCA 90 bp CCACACTTGAACATGAGACATTTCTCTCATTTCCTGTTCCTGAGTTCAAAGAGACCACATCAGAGATGCTaGGTACAAAAGAAAGCCATT +
Preference number: 2 (lower is better)
Translates to: PHLNMRHFSHFLFLSSKRPHQRC*VQKKAI
Trigger: AATGGCTTTCTTTTGTACTCAGCATCTCTGATGTGG...TCTCTTTGAACTCAGGAACAGGAAATGAGAGAAATGTCTCATGTTCAAGTGTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
3UTR-3UTR TCA 90 bp TTGCACTGGATGGTTTTGAAGAAAAAGTCTAGGACTATGTTGACAGAGGTTTTTCATTTCTTCACAATCTaGCACATCTCCCAGAGCCCA +
Preference number: 2 (lower is better)
Translates to: LHWMVLKKKSRTMLTEVFHFFTI*HISQSP
Trigger: TGGGCTCTGGGAGATGTGTCAGATTGTGAAGAAATG...AAAAACCTCTGTCAACATAGTCCTAGACTTTTTCTTCAAAACCATCCAGTGCAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
3UTR-3UTR TCA 90 bp CTCTCATTTCCTGTTCCTGAGTTCAAAGAGACGACACACAGAATAGATTTCCTCTGCACTGGATGGTTTTaGAGAAAAAGTCTAGGACTA +
Preference number: 2 (lower is better)
Translates to: LSFPVPEFKETTHRIDFLCTGWF*RKSLGL
Trigger: TAGTCCTAGACTTTTTCTTCAAAACCATCCAGTGCA...GAGGAAATCTATTCTGTGTGTCGTCTCTTTGAACTCAGGAACAGGAAATGAGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
3UTR-3UTR GCA 90 bp CTCTCATTTCCTGTTCCTGAGTTCAAAGAGACGACACACAGAATAGATTTCCTCCAGAATCACTCCAAGTaGAAACAAGCTGTTTCTAAG +
Preference number: 2 (lower is better)
Translates to: LSFPVPEFKETTHRIDFLQNHSK*KQAVSK
Trigger: CTTAGAAACAGCTTGTTTGCACTTGGAGTGATTCTG...GAGGAAATCTATTCTGTGTGTCGTCTCTTTGAACTCAGGAACAGGAAATGAGAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
3UTR-3UTR GCA 90 bp CCACACTTGAACATGAGACATTTCTCTCATTTCCTGTTCCTGAGTTCAAAGAGATCTGTCATTCCATCATaGACTCAAGAAACCCTCTTC +
Preference number: 2 (lower is better)
Translates to: PHLNMRHFSHFLFLSSKRSVIPS*TQETLF
Trigger: GAAGAGGGTTTCTTGAGTGCATGATGGAATGACAGA...TCTCTTTGAACTCAGGAACAGGAAATGAGAGAAATGTCTCATGTTCAAGTGTGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
3UTR-3UTR CCA 90 bp CCACACTTGAACATGAGACATTTCTCTCATTTCCTGTTCCTGAGTTCAAAGAGAGCGATGGGAAAGTCCTaGTTTGAAATGCACTTGAAA +
Preference number: 2 (lower is better)
Translates to: PHLNMRHFSHFLFLSSKRAMGKS*FEMHLK
Trigger: TTTCAAGTGCATTTCAAACCAGGACTTTCCCATCGC...TCTCTTTGAACTCAGGAACAGGAAATGAGAGAAATGTCTCATGTTCAAGTGTGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
3UTR-3UTR GCA 90 bp TTCACAATATGTGTCACTGTAAGTAGCCTGCATCTGTTTCCCTCATACCTATGTCATTTCCATAGCAGATaGTATCACAGCCATTCAGTT +
Preference number: 2 (lower is better)
Translates to: FTICVTVSSLHLFPSYLCHFHSR*YHSHSV
Trigger: AACTGAATGGCTGTGATAGCATCTGCTATGGAAATG...ACATAGGTATGAGGGAAACAGATGCAGGCTACTTACAGTGACACATATTGTGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
3UTR-3UTR CCA 90 bp CCACACTTGAACATGAGACATTTCTCTCATTTCCTGTTCCTGAGTTCAAAGAGAGGAGAAGTAGCAAACTaGAAAGCAACACATTTCCTT +
Preference number: 2 (lower is better)
Translates to: PHLNMRHFSHFLFLSSKRGEVAN*KATHFL
Trigger: AAGGAAATGTGTTGCTTTCCAGTTTGCTACTTCTCC...TCTCTTTGAACTCAGGAACAGGAAATGAGAGAAATGTCTCATGTTCAAGTGTGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
3UTR-3UTR TCA 90 bp TTATTTTCCATCATAAATGTTGAAGAATTTTCTCCTCATGGAGGGAGGGAGGAAGGGAAAGTCCTGGTTTaGAATGCACTTGAAATGGTT +
Preference number: 2 (lower is better)
Translates to: LFSIINVEEFSPHGGREEGKVLV*NALEMV
Trigger: AACCATTTCAAGTGCATTTCAAACCAGGACTTTCCC...TTCCTCCCTCCCTCCATGAGGAGAAAATTCTTCAACATTTATGATGGAAAATAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
3UTR-3UTR TCA 90 bp AAGTGCACTGTTTTGATATCTCCATGGAAACTGATATTTTTGATCCAGGAGACTCTCCATTACCTCTCATaGTACATTCTGACAGCTACT +
Preference number: 2 (lower is better)
Translates to: KCTVLISPWKLIFLIQETLHYLS*YILTAT
Trigger: AGTAGCTGTCAGAATGTATCATGAGAGGTAATGGAG...AGTCTCCTGGATCAAAAATATCAGTTTCCATGGAGATATCAAAACAGTGCACTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
3UTR-3UTR TCA 90 bp TTCACAATATGTGTCACTGTAAGTAGCCTGCATCTGTTTCCCTCATACCTATGTCTGCTTTTGTCTTTCTaGTCAAAGAGTATCCTTGAT +
Preference number: 2 (lower is better)
Translates to: FTICVTVSSLHLFPSYLCLLLSF*SKSILD
Trigger: ATCAAGGATACTCTTTGATCAGAAAGACAAAAGCAG...ACATAGGTATGAGGGAAACAGATGCAGGCTACTTACAGTGACACATATTGTGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
3UTR-3UTR CCA 90 bp CTCTCATTTCCTGTTCCTGAGTTCAAAGAGACGACACACAGAATAGATTTCCTCTATCATAGTGACCATTaGTGTAGACAAACCTTTTGT +
Preference number: 2 (lower is better)
Translates to: LSFPVPEFKETTHRIDFLYHSDH*CRQTFC
Trigger: ACAAAAGGTTTGTCTACACCAATGGTCACTATGATA...GAGGAAATCTATTCTGTGTGTCGTCTCTTTGAACTCAGGAACAGGAAATGAGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
3UTR-3UTR CCA 90 bp CCTCAAGGCCATAGATTAGTATGTATAGATCTTGGAAAATCTCCTTACATCACTGTGCCTAGCTTGCACTaGATGGTTTTGAAGAAAAAG +
Preference number: 2 (lower is better)
Translates to: PQGHRLVCIDLGKSPYITVPSLH*MVLKKK
Trigger: CTTTTTCTTCAAAACCATCCAGTGCAAGCTAGGCAC...AGTGATGTAAGGAGATTTTCCAAGATCTATACATACTAATCTATGGCCTTGAGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
3UTR TCA 72 bp GGACTCAGTAAGCCGGAGGACAAGGAAGGCAGCAACTaGGGTAAAGCACACCAGAGCCTTTCCCTCCTCTGG +
Preference number: 3 (lower is better)
Translates to: GLSKPEDKEGSN*GKAHQSLSLLW
Trigger: CCAGAGGAGGGAAAGGCTCTGGTGTGCTTTACCTCAGTTGCTGCCTTCCTTGTCCTCCGGCTTACTGAGTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
3UTR CCA 72 bp ATGTGTTTGTGTTGTGCCAGTGAAAGGTCTGGAGTGTaGCATACACTGCACCAGGGGCCGCAGCTGTACACC +
Preference number: 3 (lower is better)
Translates to: MCLCCASERSGV*HTLHQGPQLYT
Trigger: GGTGTACAGCTGCGGCCCCTGGTGCAGTGTATGCCACACTCCAGACCTTTCACTGGCACAACACAAACACAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
3UTR CCA 72 bp GAGGAAAGGGTGTGGAGTCTACCCAAATGCTCAGAGTaGCTCTTCAGCCAGGAAGCTCACTGTCTGGGAAGT +
Preference number: 3 (lower is better)
Translates to: EERVWSLPKCSE*LFSQEAHCLGS
Trigger: ACTTCCCAGACAGTGAGCTTCCTGGCTGAAGAGCCACTCTGAGCATTTGGGTAGACTCCACACCCTTTCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
3UTR-3UTR CAA 90 bp GTCAACAGGGTCCAGATCAAACACATGGATTGGTCCTTCCTAGGGACAGAGACATTCCCTCCTCTGGTCTaGGGGCAGCAGGGGACAAAT +
Preference number: 3 (lower is better)
Translates to: VNRVQIKHMDWSFLGTETFPPLV*GQQGTN
Trigger: ATTTGTCCCCTGCTGCCCCAAGACCAGAGGAGGGAA...TGTCTCTGTCCCTAGGAAGGACCAATCCATGTGTTTGATCTGGACCCTGTTGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
3UTR GCA 72 bp TGCTTCATGTGTTCACCAAACAGTGATGACAGTCACTaGCCCAGACCAAAGCAGCGGGTCTCAGTAGACCAC +
Preference number: 3 (lower is better)
Translates to: CFMCSPNSDDSH*PRPKQRVSVDH
Trigger: GTGGTCTACTGAGACCCGCTGCTTTGGTCTGGGGCAGTGACTGTCATCACTGTTTGGTGAACACATGAAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
3UTR CCA 72 bp ATGGTTCCACACGTCATCTCTGAAGCCTCAGAAATATaGGCAGCCATGGAGCACGGTTTTGAGGAGCAGCGA +
Preference number: 3 (lower is better)
Translates to: MVPHVISEASEI*AAMEHGFEEQR
Trigger: TCGCTGCTCCTCAAAACCGTGCTCCATGGCTGCCCATATTTCTGAGGCTTCAGAGATGACGTGTGGAACCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
3UTR-3UTR CAA 90 bp AGGGCAAATACTGACAGCCAAACACAGGGGCTTAATAGTGTGGCTTGCCTATTGCCTAGAGTCACCAGGTaGGGGGAGTTGGCATTAGCC +
Preference number: 3 (lower is better)
Translates to: RANTDSQTQGLNSVACLLPRVTR*GELALA
Trigger: GGCTAATGCCAACTCCCCCAACCTGGTGACTCTAGG...CAATAGGCAAGCCACACTATTAAGCCCCTGTGTTTGGCTGTCAGTATTTGCCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
3UTR GCA 72 bp GGAGAGCATGGTACTGGAGTGCCACTCCAGTGTGACTaGAAGGAGGAACAGCTTTACACACCTTTAATGCTC +
Preference number: 3 (lower is better)
Translates to: GEHGTGVPLQCD*KEEQLYTPLML
Trigger: GAGCATTAAAGGTGTGTAAAGCTGTTCCTCCTTGCAGTCACACTGGAGTGGCACTCCAGTACCATGCTCTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
3UTR CCA 72 bp ATTATGGATACGTCCAAATGCCAGAACCTCAGTACTTaGTTGTGGGCCAGATCCTTACCAGAGGGCACGCAG +
Preference number: 3 (lower is better)
Translates to: IMDTSKCQNLST*LWARSLPEGTQ
Trigger: CTGCGTGCCCTCTGGTAAGGATCTGGCCCACAACCAAGTACTGAGGTTCTGGCATTTGGACGTATCCATAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
3UTR-3UTR CAA 90 bp ATACTCACTAGCCAGCAGCAGTCCCACACAGAACCAAGTGGCTGTTCTTTCAGACACCAGGCTCTGAATTaGGTATCCAGGAGACTGCAT +
Preference number: 3 (lower is better)
Translates to: ILTSQQQSHTEPSGCSFRHQALN*VSRRLH
Trigger: ATGCAGTCTCCTGGATACCAAATTCAGAGCCTGGTG...TCTGAAAGAACAGCCACTTGGTTCTGTGTGGGACTGCTGCTGGCTAGTGAGTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
3UTR TCA 72 bp AGCCTCAGAAATATGGGCAGCCATGGAGCACGGTTTTaGGGAGCAGCGAGTTTACAACGAGCCCAAAGTATA +
Preference number: 3 (lower is better)
Translates to: SLRNMGSHGARF*GAASLQRAQSI
Trigger: TATACTTTGGGCTCGTTGTAAACTCGCTGCTCCTCAAAACCGTGCTCCATGGCTGCCCATATTTCTGAGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
3UTR-3UTR CAA 90 bp CCACACTTGAACATGAGACATTTCTCTCATTTCCTGTTCCTGAGTTCAAAGAGATCAGTAGACCACGACTaGGTGCTCCAGGGCAGGTGG +
Preference number: 3 (lower is better)
Translates to: PHLNMRHFSHFLFLSSKRSVDHD*VLQGRW
Trigger: CCACCTGCCCTGGAGCACCAAGTCGTGGTCTACTGA...TCTCTTTGAACTCAGGAACAGGAAATGAGAGAAATGTCTCATGTTCAAGTGTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
3UTR-3UTR CAA 90 bp ATACTCACTAGCCAGCAGCAGTCCCACACAGAACCAAGTGGCTGTTCTTTCAGAATGGTGATTCAGTGGTaGGAGAATCCCACTGTGCAT +
Preference number: 3 (lower is better)
Translates to: ILTSQQQSHTEPSGCSFRMVIQW*ENPTVH
Trigger: ATGCACAGTGGGATTCTCCAACCACTGAATCACCAT...TCTGAAAGAACAGCCACTTGGTTCTGTGTGGGACTGCTGCTGGCTAGTGAGTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
3UTR TCA 72 bp ATGAGGAGAGCATGGTACTGGAGTGCCACTCCAGTGTaGCTGCAAGGAGGAACAGCTTTACACACCTTTAAT +
Preference number: 3 (lower is better)
Translates to: MRRAWYWSATPV*LQGGTALHTFN
Trigger: ATTAAAGGTGTGTAAAGCTGTTCCTCCTTGCAGTCACACTGGAGTGGCACTCCAGTACCATGCTCTCCTCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
3UTR GCA 72 bp AGGGCAGGTGGAATCCCTAGGCAGAATCACTCCAAGTaGAAACAAGCTGTTTCTAAGAACCTAGAGTCACCA +
Preference number: 3 (lower is better)
Translates to: RAGGIPRQNHSK*KQAVSKNLESP
Trigger: TGGTGACTCTAGGTTCTTAGAAACAGCTTGTTTGCACTTGGAGTGATTCTGCCTAGGGATTCCACCTGCCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
3UTR-3UTR CAA 90 bp AAATTTGAGGTAAGGGCCTGGCCAGCTCTCAGGAAGAATATCAATCCAGTGGGTATGGTATGCATGTGTTaGTGTTGTGCCAGTGAAAGG +
Preference number: 3 (lower is better)
Translates to: KFEVRAWPALRKNINPVGMVCMC*CCASER
Trigger: CCTTTCACTGGCACAACACAAACACATGCATACCAT...ACCCACTGGATTGATATTCTTCCTGAGAGCTGGCCAGGCCCTTACCTCAAATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
3UTR-3UTR CAA 90 bp AAATTTGAGGTAAGGGCCTGGCCAGCTCTCAGGAAGAATATCAATCCAGTGGGTATAAAGGTGCCTAGCTaGCACTGGATGGTTTTGAAG +
Preference number: 3 (lower is better)
Translates to: KFEVRAWPALRKNINPVGIKVPS*HWMVLK
Trigger: CTTCAAAACCATCCAGTGCAAGCTAGGCACCTTTAT...ACCCACTGGATTGATATTCTTCCTGAGAGCTGGCCAGGCCCTTACCTCAAATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
3UTR-3UTR CAA 90 bp ATACTCACTAGCCAGCAGCAGTCCCACACAGAACCAAGTGGCTGTTCTTTCAGACCCTTTGATGAGAAATaGCCTACAGTATTGAAGGCA +
Preference number: 3 (lower is better)
Translates to: ILTSQQQSHTEPSGCSFRPFDEK*PTVLKA
Trigger: TGCCTTCAATACTGTAGGCAATTTCTCATCAAAGGG...TCTGAAAGAACAGCCACTTGGTTCTGTGTGGGACTGCTGCTGGCTAGTGAGTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
3UTR GCA 72 bp TGTAGAACACTGTTGTGTGTCTCACTCGCTGCTCTCTaGTTCATGTGTTCACCAAACAGTGATGACAGTCAC +
Preference number: 3 (lower is better)
Translates to: CRTLLCVSLAAL*FMCSPNSDDSH
Trigger: GTGACTGTCATCACTGTTTGGTGAACACATGAAGCAGAGAGCAGCGAGTGAGACACACAACAGTGTTCTACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
3UTR GCA 72 bp GCAGGTGTCAAGTCAAAACCAAGTGGTCACAGGTTCTaGAGAATCTTACACTGGGAAAAGCTGGTGCATCTT +
Preference number: 3 (lower is better)
Translates to: AGVKSKPSGHRF*RILHWEKLVHL
Trigger: AAGATGCACCAGCTTTTCCCAGTGTAAGATTCTGCAGAACCTGTGACCACTTGGTTTTGACTTGACACCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
3UTR CCA 72 bp GTCACAGGTTCTGCAGAATCTTACACTGGGAAAAGCTaGTGCATCTTATTGGCAGATGAGGTGAGCATCATG +
Preference number: 3 (lower is better)
Translates to: VTGSAESYTGKS*CILLADEVSIM
Trigger: CATGATGCTCACCTCATCTGCCAATAAGATGCACCAGCTTTTCCCAGTGTAAGATTCTGCAGAACCTGTGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
3UTR-3UTR CAA 90 bp AAATTTGAGGTAAGGGCCTGGCCAGCTCTCAGGAAGAATATCAATCCAGTGGGTTGGTTTGAAATGCACTaGAAATGGTTCCACACGTCA +
Preference number: 3 (lower is better)
Translates to: KFEVRAWPALRKNINPVGWFEMH*KWFHTS
Trigger: TGACGTGTGGAACCATTTCAAGTGCATTTCAAACCA...ACCCACTGGATTGATATTCTTCCTGAGAGCTGGCCAGGCCCTTACCTCAAATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
3UTR-3UTR CAA 90 bp CCACACTTGAACATGAGACATTTCTCTCATTTCCTGTTCCTGAGTTCAAAGAGAGTCTGCTACTTCCAGTaGGAGCTCCCCAACTGTGTT +
Preference number: 3 (lower is better)
Translates to: PHLNMRHFSHFLFLSSKRVCYFQ*ELPNCV
Trigger: AACACAGTTGGGGAGCTCCAACTGGAAGTAGCAGAC...TCTCTTTGAACTCAGGAACAGGAAATGAGAGAAATGTCTCATGTTCAAGTGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
3UTR TCA 72 bp TCTGCTACTTCCAGTTGGAGCTCCCCAACTGTGTTTTaGCACAGTAGCACTGAAGTTAGTGTACTCCAAAGT +
Preference number: 3 (lower is better)
Translates to: SATSSWSSPTVF*HSSTEVSVLQS
Trigger: ACTTTGGAGTACACTAACTTCAGTGCTACTGTGTCAAAACACAGTTGGGGAGCTCCAACTGGAAGTAGCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
3UTR TCA 72 bp TTACACTGGGAAAAGCTGGTGCATCTTATTGGCAGATaGGGTGAGCATCATGGTGATTCAGTGGTTGGAGAA +
Preference number: 3 (lower is better)
Translates to: LHWEKLVHLIGR*GEHHGDSVVGE
Trigger: TTCTCCAACCACTGAATCACCATGATGCTCACCTCATCTGCCAATAAGATGCACCAGCTTTTCCCAGTGTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
3UTR-3UTR CAA 90 bp AAATTTGAGGTAAGGGCCTGGCCAGCTCTCAGGAAGAATATCAATCCAGTGGGTTGGAAACTGATATTTTaGATCCAGGAGACTTGGACA +
Preference number: 3 (lower is better)
Translates to: KFEVRAWPALRKNINPVGWKLIF*IQETWT
Trigger: TGTCCAAGTCTCCTGGATCAAAAATATCAGTTTCCA...ACCCACTGGATTGATATTCTTCCTGAGAGCTGGCCAGGCCCTTACCTCAAATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
3UTR TCA 72 bp CTGTGCATGCTTTCGAAGCAGATCTATCAGCTGATTTaGGTCCACAGTAACAGTGTAAGAGATCAGTGGTCA +
Preference number: 3 (lower is better)
Translates to: LCMLSKQIYQLI*VHSNSVRDQWS
Trigger: TGACCACTGATCTCTTACACTGTTACTGTGGACTCAAATCAGCTGATAGATCTGCTTCGAAAGCATGCACAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
3UTR CCA 72 bp ATGAGTGCCTACCCAGGCCTTTATCATAGTGACCATTaGTGTAGACAAACCTTTTGTCCTCACCTTAGAAAG +
Preference number: 3 (lower is better)
Translates to: MSAYPGLYHSDH*CRQTFCPHLRK
Trigger: CTTTCTAAGGTGAGGACAAAAGGTTTGTCTACACCAATGGTCACTATGATAAAGGCCTGGGTAGGCACTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
3UTR-3UTR CAA 90 bp AAGTGCACTGTTTTGATATCTCCATGGAAACTGATATTTTTGATCCAGGAGACTCTCTTGATAGGGGCCTaGCTGCACATTAGCCACATC +
Preference number: 3 (lower is better)
Translates to: KCTVLISPWKLIFLIQETLLIGA*LHISHI
Trigger: GATGTGGCTAATGTGCAGCAAGGCCCCTATCAAGAG...AGTCTCCTGGATCAAAAATATCAGTTTCCATGGAGATATCAAAACAGTGCACTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
3UTR-3UTR CAA 90 bp TTGCACTGGATGGTTTTGAAGAAAAAGTCTAGGACTATGTTGACAGAGGTTTTTGTTGGAGGTGGGGATTaGAACAGAGAAGGAGGCAGT +
Preference number: 3 (lower is better)
Translates to: LHWMVLKKKSRTMLTEVFVGGGD*NREGGS
Trigger: ACTGCCTCCTTCTCTGTTCAAATCCCCACCTCCAAC...AAAAACCTCTGTCAACATAGTCCTAGACTTTTTCTTCAAAACCATCCAGTGCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
3UTR TCA 72 bp TTGGTATCCAGGAGACTGCATACAGTCTTTGCAGTCTaGGCTATTTTAAGAGACAGGTTTCCATGTTGCTTC +
Preference number: 3 (lower is better)
Translates to: LVSRRLHTVFAV*AILRDRFPCCF
Trigger: GAAGCAACATGGAAACCTGTCTCTTAAAATAGCTCAGACTGCAAAGACTGTATGCAGTCTCCTGGATACCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
3UTR-3UTR CAA 90 bp CCTCAAGGCCATAGATTAGTATGTATAGATCTTGGAAAATCTCCTTACATCACTAGGGTGTGCACTTTTTaGGTAGCGATGGGAAAGTCC +
Preference number: 3 (lower is better)
Translates to: PQGHRLVCIDLGKSPYITRVCTF*VAMGKS
Trigger: GGACTTTCCCATCGCTACCAAAAAAGTGCACACCCT...AGTGATGTAAGGAGATTTTCCAAGATCTATACATACTAATCTATGGCCTTGAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
3UTR TCA 72 bp CACTCCAATATTCCCATATGCCATTTCTTCACAATCTaGCACATCTCCCAGAGCCCATCTGCTGTTTTAATT +
Preference number: 3 (lower is better)
Translates to: HSNIPICHFFTI*HISQSPSAVLI
Trigger: AATTAAAACAGCAGATGGGCTCTGGGAGATGTGTCAGATTGTGAAGAAATGGCATATGGGAATATTGGAGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
3UTR TCA 72 bp AAAAAGTCTAGGACTATGTTGACAGAGGTTTTTCTGTaGAGCAGAGCTTCACCCAATGTCCCAGAGTTTCTT +
Preference number: 3 (lower is better)
Translates to: KKSRTMLTEVFL*SRASPNVPEFL
Trigger: AAGAAACTCTGGGACATTGGGTGAAGCTCTGCTTCACAGAAAAACCTCTGTCAACATAGTCCTAGACTTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
3UTR TCA 72 bp ATGATAGCTTCAGAAAATACCAATGCACATGGCTATTaGGACTTCAGGGCAAATACTGACAGCCAAACACAG +
Preference number: 3 (lower is better)
Translates to: MIASENTNAHGY*DFRANTDSQTQ
Trigger: CTGTGTTTGGCTGTCAGTATTTGCCCTGAAGTCTCAATAGCCATGTGCATTGGTATTTTCTGAAGCTATCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
3UTR GCA 72 bp AGTTACATGTACAGTATGTTCCCAGTAAAGCATTTCTaGTTGGGAACAGAGTTGATAAAGGCTCTGGTCATG +
Preference number: 3 (lower is better)
Translates to: SYMYSMFPVKHF*LGTELIKALVM
Trigger: CATGACCAGAGCCTTTATCAACTCTGTTCCCAAGCAGAAATGCTTTACTGGGAACATACTGTACATGTAACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
3UTR-3UTR CAA 90 bp CTCTCATTTCCTGTTCCTGAGTTCAAAGAGACGACACACAGAATAGATTTCCTCACGTTCTTGAAATATTaGTACTCTTTTTCCGAGGGG +
Preference number: 3 (lower is better)
Translates to: LSFPVPEFKETTHRIDFLTFLKY*YSFSEG
Trigger: CCCCTCGGAAAAAGAGTACAAATATTTCAAGAACGT...GAGGAAATCTATTCTGTGTGTCGTCTCTTTGAACTCAGGAACAGGAAATGAGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
3UTR-3UTR CAA 90 bp TTCACAATATGTGTCACTGTAAGTAGCCTGCATCTGTTTCCCTCATACCTATGTAAGTCCCCAGGGTATTaGGAAATACTTCTGGCTATA +
Preference number: 3 (lower is better)
Translates to: FTICVTVSSLHLFPSYLCKSPGY*EILLAI
Trigger: TATAGCCAGAAGTATTTCCAAATACCCTGGGGACTT...ACATAGGTATGAGGGAAACAGATGCAGGCTACTTACAGTGACACATATTGTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
3UTR-3UTR CAA 90 bp CTCTCATTTCCTGTTCCTGAGTTCAAAGAGACGACACACAGAATAGATTTCCTCTTGCACTGGATGGTTTaGAAGAAAAAGTCTAGGACT +
Preference number: 3 (lower is better)
Translates to: LSFPVPEFKETTHRIDFLLHWMV*KKKSRT
Trigger: AGTCCTAGACTTTTTCTTCAAAACCATCCAGTGCAA...GAGGAAATCTATTCTGTGTGTCGTCTCTTTGAACTCAGGAACAGGAAATGAGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
3UTR-3UTR CAA 90 bp TTCACAATATGTGTCACTGTAAGTAGCCTGCATCTGTTTCCCTCATACCTATGTAAGACACCAGAGAACTaGAAAAGGAGTCTAAGTGCA +
Preference number: 3 (lower is better)
Translates to: FTICVTVSSLHLFPSYLCKTPEN*KRSLSA
Trigger: TGCACTTAGACTCCTTTTCAAGTTCTCTGGTGTCTT...ACATAGGTATGAGGGAAACAGATGCAGGCTACTTACAGTGACACATATTGTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
3UTR-3UTR CAA 90 bp TTCACAATATGTGTCACTGTAAGTAGCCTGCATCTGTTTCCCTCATACCTATGTAACAGGCCTCCTTTATaGTCTAGATGGAAGAACAGT +
Preference number: 3 (lower is better)
Translates to: FTICVTVSSLHLFPSYLCNRPPL*SRWKNS
Trigger: ACTGTTCTTCCATCTAGACAATAAAGGAGGCCTGTT...ACATAGGTATGAGGGAAACAGATGCAGGCTACTTACAGTGACACATATTGTGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
3UTR-3UTR CAA 90 bp TTCACAATATGTGTCACTGTAAGTAGCCTGCATCTGTTTCCCTCATACCTATGTCAACAGAAACACCCATaGACTTCTACAGAAACAGAG +
Preference number: 3 (lower is better)
Translates to: FTICVTVSSLHLFPSYLCQQKHP*TSTETE
Trigger: CTCTGTTTCTGTAGAAGTCAATGGGTGTTTCTGTTG...ACATAGGTATGAGGGAAACAGATGCAGGCTACTTACAGTGACACATATTGTGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
3UTR-3UTR CAA 90 bp CTCTCATTTCCTGTTCCTGAGTTCAAAGAGACGACACACAGAATAGATTTCCTCGGTTACTATATCAAATaGATGAAGGCCAGATTACAG +
Preference number: 3 (lower is better)
Translates to: LSFPVPEFKETTHRIDFLGYYIK*MKARLQ
Trigger: CTGTAATCTGGCCTTCATCAATTTGATATAGTAACC...GAGGAAATCTATTCTGTGTGTCGTCTCTTTGAACTCAGGAACAGGAAATGAGAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
3UTR-3UTR CAA 90 bp CCACACTTGAACATGAGACATTTCTCTCATTTCCTGTTCCTGAGTTCAAAGAGAAAATTGCCTACAGTATaGAAGGCAAGACCTGATTCT +
Preference number: 3 (lower is better)
Translates to: PHLNMRHFSHFLFLSSKRKLPTV*KARPDS
Trigger: AGAATCAGGTCTTGCCTTCAATACTGTAGGCAATTT...TCTCTTTGAACTCAGGAACAGGAAATGAGAGAAATGTCTCATGTTCAAGTGTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
3UTR GCA 72 bp CTCTTCAATTCCTTTAGTGTCTCTGTCATTCCATCATaGACTCAAGAAACCCTCTTCTCTTCCATCAACATA +
Preference number: 3 (lower is better)
Translates to: LFNSFSVSVIPS*TQETLFSSINI
Trigger: TATGTTGATGGAAGAGAAGAGGGTTTCTTGAGTGCATGATGGAATGACAGAGACACTAAAGGAATTGAAGAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
3UTR GCA 72 bp TCATATGCATTTCCCAAAGAAGCAGAGTACTCACAATaGTCTGCAGTAACTGCTAGAAGACAGTATGACATA +
Preference number: 3 (lower is better)
Translates to: SYAFPKEAEYSQ*SAVTARRQYDI
Trigger: TATGTCATACTGTCTTCTAGCAGTTACTGCAGAGCATTGTGAGTACTCTGCTTCTTTGGGAAATGCATATGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
3UTR-3UTR CAA 90 bp CCACACTTGAACATGAGACATTTCTCTCATTTCCTGTTCCTGAGTTCAAAGAGAGAATGTGTTCTGAGATaGCTTCTTTATATTCCATGG +
Preference number: 3 (lower is better)
Translates to: PHLNMRHFSHFLFLSSKRECVLR*LLYIPW
Trigger: CCATGGAATATAAAGAAGCAATCTCAGAACACATTC...TCTCTTTGAACTCAGGAACAGGAAATGAGAGAAATGTCTCATGTTCAAGTGTGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
3UTR-3UTR CAA 90 bp TTGCACTGGATGGTTTTGAAGAAAAAGTCTAGGACTATGTTGACAGAGGTTTTTTATCAGAAAACTGTCTaGTTTCAAACTCTGGGGTGG +
Preference number: 3 (lower is better)
Translates to: LHWMVLKKKSRTMLTEVFYQKTV*FQTLGW
Trigger: CCACCCCAGAGTTTGAAACAAGACAGTTTTCTGATA...AAAAACCTCTGTCAACATAGTCCTAGACTTTTTCTTCAAAACCATCCAGTGCAA
39% GC, longest homopolymer 6 nt, total homopolymer stretches 23 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
3UTR-3UTR CAA 90 bp CCACACTTGAACATGAGACATTTCTCTCATTTCCTGTTCCTGAGTTCAAAGAGAAGAATTTGGCTTGATTaGTTGGGGAAATATTTGTGG +
Preference number: 3 (lower is better)
Translates to: PHLNMRHFSHFLFLSSKRRIWLD*LGKYLW
Trigger: CCACAAATATTTCCCCAACAAATCAAGCCAAATTCT...TCTCTTTGAACTCAGGAACAGGAAATGAGAGAAATGTCTCATGTTCAAGTGTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
3UTR TCA 72 bp GTGGAATTCCCTTTGATGAGAAATTGCCTACAGTATTaGAGGCAAGACCTGATTCTATCAATGATTAAGGTG +
Preference number: 3 (lower is better)
Translates to: VEFPLMRNCLQY*RQDLILSMIKV
Trigger: CACCTTAATCATTGATAGAATCAGGTCTTGCCTTCAATACTGTAGGCAATTTCTCATCAAAGGGAATTCCAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
3UTR TCA 72 bp AGAAAGCATTTCCTATCAAGTGTAGCCATACGTTCTTaGAATATTTGTACTCTTTTTCCGAGGGGAAAGAGA +
Preference number: 3 (lower is better)
Translates to: RKHFLSSVAIRS*NICTLFPRGKR
Trigger: TCTCTTTCCCCTCGGAAAAAGAGTACAAATATTTCAAGAACGTATGGCTACACTTGATAGGAAATGCTTTCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
3UTR TCA 72 bp GAAAACTGTCAGGGAAATACAGAGCTATCTCACTCTTaGAATGGCTCTGTGGTAACTAATATATATTGCCTT +
Preference number: 3 (lower is better)
Translates to: ENCQGNTELSHS*NGSVVTNIYCL
Trigger: AAGGCAATATATATTAGTTACCACAGAGCCATTTCAAGAGTGAGATAGCTCTGTATTTCCCTGACAGTTTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
3UTR CCA 72 bp TTGATAAAGGCTCTGGTCATGGATAATAAGCATAAATaGCAGGACATCGTCTTTCAAAGAGATCATGTTTCA +
Preference number: 3 (lower is better)
Translates to: LIKALVMDNKHK*QDIVFQRDHVS
Trigger: TGAAACATGATCTCTTTGAAAGACGATGTCCTGCCATTTATGCTTATTATCCATGACCAGAGCCTTTATCAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
3UTR GCA 72 bp TTTCTTCACAATCTGACACATCTCCCAGAGCCCATCTaGTGTTTTAATTTCAATTTTAACACAGAGTTATGT +
Preference number: 3 (lower is better)
Translates to: FLHNLTHLPEPI*CFNFNFNTELC
Trigger: ACATAACTCTGTGTTAAAATTGAAATTAAAACAGCAGATGGGCTCTGGGAGATGTGTCAGATTGTGAAGAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
3UTR GCA 72 bp TCCTGCCTTATTTGTATTTTAGTGATTCCCTATTGCTaGTTTTGTCTTTCTGATCAAAGAGTATCCTTGATC +
Preference number: 3 (lower is better)
Translates to: SCLICILVIPYC*FCLSDQRVSLI
Trigger: GATCAAGGATACTCTTTGATCAGAAAGACAAAAGCAGCAATAGGGAATCACTAAAATACAAATAAGGCAGGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
3UTR TCA 72 bp CTCTCAGGAAGAATATCAATCCAGTGGGTTAATGAGTaGAACAGAAAAATGATAGCTTCAGAAAATACCAAT +
Preference number: 3 (lower is better)
Translates to: LSGRISIQWVNE*NRKMIASENTN
Trigger: ATTGGTATTTTCTGAAGCTATCATTTTTCTGTTTCACTCATTAACCCACTGGATTGATATTCTTCCTGAGAG
35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
CDS-3UTR CCA 90 bp AGGTCTGGAGTGTGGCATACACTGCACCAGGGGCCGCAGCTGTACACCTACAGAGGGTGCTCAGCTCTCTaGCACTTGGCAGGGTCCTGG +
Preference number: 4 (lower is better)
Translates to: RSGVWHTLHQGPQLYTYRGCSAL*HLAGSW
Trigger: CCAGGACCCTGCCAAGTGCCAGAGAGCTGAGCACCC...TCTGTAGGTGTACAGCTGCGGCCCCTGGTGCAGTGTATGCCACACTCCAGACCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
CDS-3UTR CCA 90 bp AGGTCTGGAGTGTGGCATACACTGCACCAGGGGCCGCAGCTGTACACCTACAGAAGGGTGTCCAGGGTGTaGTCTTCTTCAGCTCCGGGC +
Preference number: 4 (lower is better)
Translates to: RSGVWHTLHQGPQLYTYRRVSRV*SSSAPG
Trigger: GCCCGGAGCTGAAGAAGACCACACCCTGGACACCCT...TCTGTAGGTGTACAGCTGCGGCCCCTGGTGCAGTGTATGCCACACTCCAGACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
CDS-3UTR GCA 90 bp AGGTCTGGAGTGTGGCATACACTGCACCAGGGGCCGCAGCTGTACACCTACAGAGGCCAAGGCATGGCATaGCCCCAAACTTGGGTTCTG +
Preference number: 4 (lower is better)
Translates to: RSGVWHTLHQGPQLYTYRGQGMA*PQTWVL
Trigger: CAGAACCCAAGTTTGGGGGCATGCCATGCCTTGGCC...TCTGTAGGTGTACAGCTGCGGCCCCTGGTGCAGTGTATGCCACACTCCAGACCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
CDS-3UTR TCA 90 bp AGGTCTGGAGTGTGGCATACACTGCACCAGGGGCCGCAGCTGTACACCTACAGATCCATGGTGCCGCACTaGAAATTGGGGTTGGGGTTG +
Preference number: 4 (lower is better)
Translates to: RSGVWHTLHQGPQLYTYRSMVPH*KLGLGL
Trigger: CAACCCCAACCCCAATTTTCAGTGCGGCACCATGGA...TCTGTAGGTGTACAGCTGCGGCCCCTGGTGCAGTGTATGCCACACTCCAGACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
CDS-3UTR TCA 90 bp AGGGCAAATACTGACAGCCAAACACAGGGGCTTAATAGTGTGGCTTGCCTATTGGTCCTCCGGCGGGCTTaGATGCCACCCCCGCACTGG +
Preference number: 4 (lower is better)
Translates to: RANTDSQTQGLNSVACLLVLRRA*MPPPHW
Trigger: CCAGTGCGGGGGTGGCATTCAAGCCCGCCGGAGGAC...CAATAGGCAAGCCACACTATTAAGCCCCTGTGTTTGGCTGTCAGTATTTGCCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
CDS-3UTR GCA 90 bp AGGTCTGGAGTGTGGCATACACTGCACCAGGGGCCGCAGCTGTACACCTACAGATGCTGCAGTCTCTGCTaGACTGTGACCAGGAAGTCC +
Preference number: 4 (lower is better)
Translates to: RSGVWHTLHQGPQLYTYRCCSLC*TVTRKS
Trigger: GGACTTCCTGGTCACAGTGCAGCAGAGACTGCAGCA...TCTGTAGGTGTACAGCTGCGGCCCCTGGTGCAGTGTATGCCACACTCCAGACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
CDS-3UTR CCA 90 bp AACAGTGATGACAGTCACTGCCCCAGACCAAAGCAGCGGGTCTCAGTAGACCACCGATGGGCCAAGGCATaGCATGCCCCCAAACTTGGG +
Preference number: 4 (lower is better)
Translates to: NSDDSHCPRPKQRVSVDHRWAKA*HAPKLG
Trigger: CCCAAGTTTGGGGGCATGCCATGCCTTGGCCCATCG...GTGGTCTACTGAGACCCGCTGCTTTGGTCTGGGGCAGTGACTGTCATCACTGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
CDS-3UTR GCA 90 bp AGGTCTGGAGTGTGGCATACACTGCACCAGGGGCCGCAGCTGTACACCTACAGAAGGGTGGATGACAGTTaGATCATGGGACTGCTGCTG +
Preference number: 4 (lower is better)
Translates to: RSGVWHTLHQGPQLYTYRRVDDS*IMGLLL
Trigger: CAGCAGCAGTCCCATGATGCAACTGTCATCCACCCT...TCTGTAGGTGTACAGCTGCGGCCCCTGGTGCAGTGTATGCCACACTCCAGACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
CDS-3UTR CCA 90 bp AGGTCTGGAGTGTGGCATACACTGCACCAGGGGCCGCAGCTGTACACCTACAGATGTAACAGGCCTTCTTaGTGGCTTCGTCACACTCCC +
Preference number: 4 (lower is better)
Translates to: RSGVWHTLHQGPQLYTYRCNRPS*WLRHTP
Trigger: GGGAGTGTGACGAAGCCACCAAGAAGGCCTGTTACA...TCTGTAGGTGTACAGCTGCGGCCCCTGGTGCAGTGTATGCCACACTCCAGACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
CDS-3UTR CCA 90 bp AGGTCTGGAGTGTGGCATACACTGCACCAGGGGCCGCAGCTGTACACCTACAGAGACTCTCCTCCAGGCTaGTGCATTTCTTCATCACCG +
Preference number: 4 (lower is better)
Translates to: RSGVWHTLHQGPQLYTYRDSPPG*CISSSP
Trigger: CGGTGATGAAGAAATGCACCAGCCTGGAGGAGAGTC...TCTGTAGGTGTACAGCTGCGGCCCCTGGTGCAGTGTATGCCACACTCCAGACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
CDS-3UTR GCA 90 bp GTCAACAGGGTCCAGATCAAACACATGGATTGGTCCTTCCTAGGGACAGAGACATGGGCGTGGGGTTGCTaGAGGATCGCTGCCGCACTT +
Preference number: 4 (lower is better)
Translates to: VNRVQIKHMDWSFLGTETWAWGC*RIAAAL
Trigger: AAGTGCGGCAGCGATCCTGCAGCAACCCCACGCCCA...TGTCTCTGTCCCTAGGAAGGACCAATCCATGTGTTTGATCTGGACCCTGTTGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
CDS-3UTR CCA 90 bp GTCAACAGGGTCCAGATCAAACACATGGATTGGTCCTTCCTAGGGACAGAGACAAGACCCGGGCAGCCCTaGAGAACACCGTCTTCCCAC +
Preference number: 4 (lower is better)
Translates to: VNRVQIKHMDWSFLGTETRPGQP*RTPSSH
Trigger: GTGGGAAGACGGTGTTCTCCAGGGCTGCCCGGGTCT...TGTCTCTGTCCCTAGGAAGGACCAATCCATGTGTTTGATCTGGACCCTGTTGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
CDS-3UTR CCA 90 bp AGGTCTGGAGTGTGGCATACACTGCACCAGGGGCCGCAGCTGTACACCTACAGAACAAATAGGACACTCTaGCTGTGGAGGATCTGCAGG +
Preference number: 4 (lower is better)
Translates to: RSGVWHTLHQGPQLYTYRTNRTL*LWRICR
Trigger: CCTGCAGATCCTCCACAGCCAGAGTGTCCTATTTGT...TCTGTAGGTGTACAGCTGCGGCCCCTGGTGCAGTGTATGCCACACTCCAGACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
CDS-3UTR GCA 90 bp GTCAACAGGGTCCAGATCAAACACATGGATTGGTCCTTCCTAGGGACAGAGACAGCTTCCGGTTCCGAATaGCCCTGCTGCAGTCTCTGC +
Preference number: 4 (lower is better)
Translates to: VNRVQIKHMDWSFLGTETASGSE*PCCSLC
Trigger: GCAGAGACTGCAGCAGGGGCATTCGGAACCGGAAGC...TGTCTCTGTCCCTAGGAAGGACCAATCCATGTGTTTGATCTGGACCCTGTTGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
CDS-3UTR CCA 90 bp AACAGTGATGACAGTCACTGCCCCAGACCAAAGCAGCGGGTCTCAGTAGACCACAACAGGCCTTCTTGGTaGCTTCGTCACACTCCCACT +
Preference number: 4 (lower is better)
Translates to: NSDDSHCPRPKQRVSVDHNRPSW*LRHTPT
Trigger: AGTGGGAGTGTGACGAAGCCACCAAGAAGGCCTGTT...GTGGTCTACTGAGACCCGCTGCTTTGGTCTGGGGCAGTGACTGTCATCACTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
CDS-3UTR TCA 90 bp AGGGCAAATACTGACAGCCAAACACAGGGGCTTAATAGTGTGGCTTGCCTATTGCAGCATTCTCGGCTCTaGACTCCCGTAACCAGGGGC +
Preference number: 4 (lower is better)
Translates to: RANTDSQTQGLNSVACLLQHSRL*TPVTRG
Trigger: GCCCCTGGTTACGGGAGTTCAGAGCCGAGAATGCTG...CAATAGGCAAGCCACACTATTAAGCCCCTGTGTTTGGCTGTCAGTATTTGCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
CDS-3UTR TCA 90 bp AAATTTGAGGTAAGGGCCTGGCCAGCTCTCAGGAAGAATATCAATCCAGTGGGTTGCCAACCACCACACTaGGGAGCTGGGCTGTCACAG +
Preference number: 4 (lower is better)
Translates to: KFEVRAWPALRKNINPVGCQPPH*GAGLSQ
Trigger: CTGTGACAGCCCAGCTCCTCAGTGTGGTGGTTGGCA...ACCCACTGGATTGATATTCTTCCTGAGAGCTGGCCAGGCCCTTACCTCAAATTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
CDS-3UTR GCA 90 bp ATACTCACTAGCCAGCAGCAGTCCCACACAGAACCAAGTGGCTGTTCTTTCAGAGGCCCTGGTCCATGGTaGCGCACTGAAAATTGGGGT +
Preference number: 4 (lower is better)
Translates to: ILTSQQQSHTEPSGCSFRGPGPW*RTENWG
Trigger: ACCCCAATTTTCAGTGCGGCACCATGGACCAGGGCC...TCTGAAAGAACAGCCACTTGGTTCTGTGTGGGACTGCTGCTGGCTAGTGAGTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
CDS-3UTR GCA 90 bp AACAGTGATGACAGTCACTGCCCCAGACCAAAGCAGCGGGTCTCAGTAGACCACGGGATCTTGGCCACATaGTCCTGTAGTCCCACAAAT +
Preference number: 4 (lower is better)
Translates to: NSDDSHCPRPKQRVSVDHGILAT*SCSPTN
Trigger: ATTTGTGGGACTACAGGAGCATGTGGCCAAGATCCC...GTGGTCTACTGAGACCCGCTGCTTTGGTCTGGGGCAGTGACTGTCATCACTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
CDS-3UTR GCA 90 bp GTCAACAGGGTCCAGATCAAACACATGGATTGGTCCTTCCTAGGGACAGAGACAGGTTCCGAATGCCCCTaGTGCAGTCTCTGCTGCACT +
Preference number: 4 (lower is better)
Translates to: VNRVQIKHMDWSFLGTETGSECP*CSLCCT
Trigger: AGTGCAGCAGAGACTGCAGCAGGGGCATTCGGAACC...TGTCTCTGTCCCTAGGAAGGACCAATCCATGTGTTTGATCTGGACCCTGTTGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
CDS-3UTR CCA 90 bp ATACTCACTAGCCAGCAGCAGTCCCACACAGAACCAAGTGGCTGTTCTTTCAGAGGCTGGATCTCGCCCTaGGAAATCCATGGCTGTTGC +
Preference number: 4 (lower is better)
Translates to: ILTSQQQSHTEPSGCSFRGWISP*EIHGCC
Trigger: GCAACAGCCATGGATTTCCCAGGGCGAGATCCAGCC...TCTGAAAGAACAGCCACTTGGTTCTGTGTGGGACTGCTGCTGGCTAGTGAGTAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
CDS-3UTR GCA 90 bp ATACTCACTAGCCAGCAGCAGTCCCACACAGAACCAAGTGGCTGTTCTTTCAGATTGCTGCAGGATCGCTaGCGCACTTGGAAGCCAATG +
Preference number: 4 (lower is better)
Translates to: ILTSQQQSHTEPSGCSFRLLQDR*RTWKPM
Trigger: CATTGGCTTCCAAGTGCGGCAGCGATCCTGCAGCAA...TCTGAAAGAACAGCCACTTGGTTCTGTGTGGGACTGCTGCTGGCTAGTGAGTAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
CDS-3UTR CCA 90 bp CCTCAAGGCCATAGATTAGTATGTATAGATCTTGGAAAATCTCCTTACATCACTCGCGCCCGCCATGCCTaGGCGTGGGGTTGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: PQGHRLVCIDLGKSPYITRARHA*AWGCCR
Trigger: CCTGCAGCAACCCCACGCCCAGGCATGGCGGGCGCG...AGTGATGTAAGGAGATTTTCCAAGATCTATACATACTAATCTATGGCCTTGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
CDS-3UTR CCA 90 bp AGGTCTGGAGTGTGGCATACACTGCACCAGGGGCCGCAGCTGTACACCTACAGATTTCTTCTACGCTGCTaGATCTTGCCACAGATACTT +
Preference number: 4 (lower is better)
Translates to: RSGVWHTLHQGPQLYTYRFLLRC*ILPQIL
Trigger: AAGTATCTGTGGCAAGATCCAGCAGCGTAGAAGAAA...TCTGTAGGTGTACAGCTGCGGCCCCTGGTGCAGTGTATGCCACACTCCAGACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
CDS-3UTR TCA 90 bp AAATTTGAGGTAAGGGCCTGGCCAGCTCTCAGGAAGAATATCAATCCAGTGGGTGGCTGTTGTCCTCCATaGAAGAGGGCACTGTGGTCA +
Preference number: 4 (lower is better)
Translates to: KFEVRAWPALRKNINPVGGCCPP*KRALWS
Trigger: TGACCACAGTGCCCTCTTTCATGGAGGACAACAGCC...ACCCACTGGATTGATATTCTTCCTGAGAGCTGGCCAGGCCCTTACCTCAAATTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
CDS-3UTR TCA 90 bp AGGGCAAATACTGACAGCCAAACACAGGGGCTTAATAGTGTGGCTTGCCTATTGCATTGTCAGAGATGTTaGCAGGGGTCCAGGGTGTCC +
Preference number: 4 (lower is better)
Translates to: RANTDSQTQGLNSVACLLHCQRC*QGSRVS
Trigger: GGACACCCTGGACCCCTGTCAACATCTCTGACAATG...CAATAGGCAAGCCACACTATTAAGCCCCTGTGTTTGGCTGTCAGTATTTGCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
CDS-3UTR GCA 90 bp GTCAACAGGGTCCAGATCAAACACATGGATTGGTCCTTCCTAGGGACAGAGACAGCTGGTATTCCACATTaGATCCTGCACAGTCAGGCC +
Preference number: 4 (lower is better)
Translates to: VNRVQIKHMDWSFLGTETAGIPH*ILHSQA
Trigger: GGCCTGACTGTGCAGGATGCAATGTGGAATACCAGC...TGTCTCTGTCCCTAGGAAGGACCAATCCATGTGTTTGATCTGGACCCTGTTGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
CDS-3UTR GCA 90 bp ATACTCACTAGCCAGCAGCAGTCCCACACAGAACCAAGTGGCTGTTCTTTCAGATGGGTTCTGGGTTGTTaGAAACACGCTTCCGGTTCC +
Preference number: 4 (lower is better)
Translates to: ILTSQQQSHTEPSGCSFRWVLGC*KHASGS
Trigger: GGAACCGGAAGCGTGTTTGCAACAACCCAGAACCCA...TCTGAAAGAACAGCCACTTGGTTCTGTGTGGGACTGCTGCTGGCTAGTGAGTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
CDS-3UTR CCA 90 bp TTCACAATATGTGTCACTGTAAGTAGCCTGCATCTGTTTCCCTCATACCTATGTCGCCATGCCTGGGCGTaGGGTTGCTGCAGGATCGCT +
Preference number: 4 (lower is better)
Translates to: FTICVTVSSLHLFPSYLCRHAWA*GCCRIA
Trigger: AGCGATCCTGCAGCAACCCCACGCCCAGGCATGGCG...ACATAGGTATGAGGGAAACAGATGCAGGCTACTTACAGTGACACATATTGTGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
CDS-3UTR CCA 90 bp TTCACAATATGTGTCACTGTAAGTAGCCTGCATCTGTTTCCCTCATACCTATGTCTTTCCTCCCTGTTCTaGCCCACGCACACGCGCCCG +
Preference number: 4 (lower is better)
Translates to: FTICVTVSSLHLFPSYLCLSSLF*PTHTRP
Trigger: CGGGCGCGTGTGCGTGGGCCAGAACAGGGAGGAAAG...ACATAGGTATGAGGGAAACAGATGCAGGCTACTTACAGTGACACATATTGTGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
CDS-3UTR CCA 90 bp ATACTCACTAGCCAGCAGCAGTCCCACACAGAACCAAGTGGCTGTTCTTTCAGAGTCCCCTCCATATGCTaGGGCTGGATTCGAACAAGA +
Preference number: 4 (lower is better)
Translates to: ILTSQQQSHTEPSGCSFRVPSIC*GWIRTR
Trigger: TCTTGTTCGAATCCAGCCCCAGCATATGGAGGGGAC...TCTGAAAGAACAGCCACTTGGTTCTGTGTGGGACTGCTGCTGGCTAGTGAGTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
CDS-3UTR TCA 90 bp AGGGCAAATACTGACAGCCAAACACAGGGGCTTAATAGTGTGGCTTGCCTATTGGCCATGCCACTGATCTaGTCATGGATCTCAGTCAGG +
Preference number: 4 (lower is better)
Translates to: RANTDSQTQGLNSVACLLAMPLI*SWISVR
Trigger: CCTGACTGAGATCCATGATCAGATCAGTGGCATGGC...CAATAGGCAAGCCACACTATTAAGCCCCTGTGTTTGGCTGTCAGTATTTGCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
CDS-3UTR GCA 90 bp ATACTCACTAGCCAGCAGCAGTCCCACACAGAACCAAGTGGCTGTTCTTTCAGAACTGTGGTCACTGGCTaGACCACTTCATGCATCAGA +
Preference number: 4 (lower is better)
Translates to: ILTSQQQSHTEPSGCSFRTVVTG*TTSCIR
Trigger: TCTGATGCATGAAGTGGTGCAGCCAGTGACCACAGT...TCTGAAAGAACAGCCACTTGGTTCTGTGTGGGACTGCTGCTGGCTAGTGAGTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
CDS-3UTR GCA 90 bp GTCAACAGGGTCCAGATCAAACACATGGATTGGTCCTTCCTAGGGACAGAGACATCTCCTCCAGGCTGGTaGATTTCTTCATCACCGCAT +
Preference number: 4 (lower is better)
Translates to: VNRVQIKHMDWSFLGTETSPPGW*ISSSPH
Trigger: ATGCGGTGATGAAGAAATGCACCAGCCTGGAGGAGA...TGTCTCTGTCCCTAGGAAGGACCAATCCATGTGTTTGATCTGGACCCTGTTGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
CDS-3UTR GCA 90 bp TTATTTTCCATCATAAATGTTGAAGAATTTTCTCCTCATGGAGGGAGGGAGGAACCCCGCACTGGGCTGTaGACCGTTCCCAAGGTCCCC +
Preference number: 4 (lower is better)
Translates to: LFSIINVEEFSPHGGREEPRTGL*TVPKVP
Trigger: GGGGACCTTGGGAACGGTGCACAGCCCAGTGCGGGG...TTCCTCCCTCCCTCCATGAGGAGAAAATTCTTCAACATTTATGATGGAAAATAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
CDS-3UTR CCA 90 bp AAATTTGAGGTAAGGGCCTGGCCAGCTCTCAGGAAGAATATCAATCCAGTGGGTTCTTCAGGGGGATCTTaGCCACATGCTCCTGTAGTC +
Preference number: 4 (lower is better)
Translates to: KFEVRAWPALRKNINPVGSSGGS*PHAPVV
Trigger: GACTACAGGAGCATGTGGCCAAGATCCCCCTGAAGA...ACCCACTGGATTGATATTCTTCCTGAGAGCTGGCCAGGCCCTTACCTCAAATTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
CDS-3UTR CCA 90 bp AACAGTGATGACAGTCACTGCCCCAGACCAAAGCAGCGGGTCTCAGTAGACCACTTGGTGTTACAAGGCTaGTATTCCACATTGCATCCT +
Preference number: 4 (lower is better)
Translates to: NSDDSHCPRPKQRVSVDHLVLQG*YSTLHP
Trigger: AGGATGCAATGTGGAATACCAGCCTTGTAACACCAA...GTGGTCTACTGAGACCCGCTGCTTTGGTCTGGGGCAGTGACTGTCATCACTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
CDS-3UTR CCA 90 bp GTCAACAGGGTCCAGATCAAACACATGGATTGGTCCTTCCTAGGGACAGAGACAATGACAGTTGCATCATaGGACTGCTGCTGGTACCTC +
Preference number: 4 (lower is better)
Translates to: VNRVQIKHMDWSFLGTETMTVAS*DCCWYL
Trigger: GAGGTACCAGCAGCAGTCCCATGATGCAACTGTCAT...TGTCTCTGTCCCTAGGAAGGACCAATCCATGTGTTTGATCTGGACCCTGTTGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
3UTR CAA 72 bp AAGCCTCAGAAATATGGGCAGCCATGGAGCACGGTTTaGAGGAGCAGCGAGTTTACAACGAGCCCAAAGTAT +
Preference number: 4 (lower is better)
Translates to: KPQKYGQPWSTV*RSSEFTTSPKY
Trigger: ATACTTTGGGCTCGTTGTAAACTCGCTGCTCCTCAAAACCGTGCTCCATGGCTGCCCATATTTCTGAGGCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
CDS-3UTR TCA 90 bp AACAGTGATGACAGTCACTGCCCCAGACCAAAGCAGCGGGTCTCAGTAGACCACATCAGAATGAACTTCTaGGCATCCTGTAGGTTTCTT +
Preference number: 4 (lower is better)
Translates to: NSDDSHCPRPKQRVSVDHIRMNF*ASCRFL
Trigger: AAGAAACCTACAGGATGCTCAGAAGTTCATTCTGAT...GTGGTCTACTGAGACCCGCTGCTTTGGTCTGGGGCAGTGACTGTCATCACTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
CDS-3UTR TCA 90 bp CCACACTTGAACATGAGACATTTCTCTCATTTCCTGTTCCTGAGTTCAAAGAGACAGCTGCCTGAGCTCTaGCTCAGGGGAGCTCGTACT +
Preference number: 4 (lower is better)
Translates to: PHLNMRHFSHFLFLSSKRQLPEL*LRGART
Trigger: AGTACGAGCTCCCCTGAGTCAGAGCTCAGGCAGCTG...TCTCTTTGAACTCAGGAACAGGAAATGAGAGAAATGTCTCATGTTCAAGTGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
CDS-3UTR GCA 90 bp AAATTTGAGGTAAGGGCCTGGCCAGCTCTCAGGAAGAATATCAATCCAGTGGGTGAAGAGGAGGCAAAGTaGCCAGACTTCGGTAAATGG +
Preference number: 4 (lower is better)
Translates to: KFEVRAWPALRKNINPVGEEEAK*PDFGKW
Trigger: CCATTTACCGAAGTCTGGGCACTTTGCCTCCTCTTC...ACCCACTGGATTGATATTCTTCCTGAGAGCTGGCCAGGCCCTTACCTCAAATTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
CDS-3UTR CCA 90 bp AAATTTGAGGTAAGGGCCTGGCCAGCTCTCAGGAAGAATATCAATCCAGTGGGTACTGAAAATTGGGGTTaGGGTTGGGATAAGGCAGCC +
Preference number: 4 (lower is better)
Translates to: KFEVRAWPALRKNINPVGTENWG*GWDKAA
Trigger: GGCTGCCTTATCCCAACCCCAACCCCAATTTTCAGT...ACCCACTGGATTGATATTCTTCCTGAGAGCTGGCCAGGCCCTTACCTCAAATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
3UTR CAA 72 bp TTGGCAGATGAGGTGAGCATCATGGTGATTCAGTGGTaGGAGAATCCCACTGTGCATGCTTTCGAAGCAGAT +
Preference number: 4 (lower is better)
Translates to: LADEVSIMVIQW*ENPTVHAFEAD
Trigger: ATCTGCTTCGAAAGCATGCACAGTGGGATTCTCCAACCACTGAATCACCATGATGCTCACCTCATCTGCCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
CDS-3UTR TCA 90 bp CTCTCATTTCCTGTTCCTGAGTTCAAAGAGACGACACACAGAATAGATTTCCTCTGGTACAGACAGGTGTaGAGGCATTGGTCCCACAGG +
Preference number: 4 (lower is better)
Translates to: LSFPVPEFKETTHRIDFLWYRQV*RHWSHR
Trigger: CCTGTGGGACCAATGCCTTCACACCTGTCTGTACCA...GAGGAAATCTATTCTGTGTGTCGTCTCTTTGAACTCAGGAACAGGAAATGAGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
CDS-3UTR TCA 90 bp ATACTCACTAGCCAGCAGCAGTCCCACACAGAACCAAGTGGCTGTTCTTTCAGAGGAAGAAGAAGTAGGTaGAATTTCCGATGTCGTAGG +
Preference number: 4 (lower is better)
Translates to: ILTSQQQSHTEPSGCSFRGRRSR*NFRCRR
Trigger: CCTACGACATCGGAAATTTCACCTACTTCTTCTTCC...TCTGAAAGAACAGCCACTTGGTTCTGTGTGGGACTGCTGCTGGCTAGTGAGTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
CDS-3UTR TCA 90 bp CCACACTTGAACATGAGACATTTCTCTCATTTCCTGTTCCTGAGTTCAAAGAGACCAGGAAGTCCAGGCTaGCCATGCCCCATTGACTGT +
Preference number: 4 (lower is better)
Translates to: PHLNMRHFSHFLFLSSKRPGSPG*PCPIDC
Trigger: ACAGTCAATGGGGCATGGTCAGCCTGGACTTCCTGG...TCTCTTTGAACTCAGGAACAGGAAATGAGAGAAATGTCTCATGTTCAAGTGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
CDS-3UTR GCA 90 bp CCACACTTGAACATGAGACATTTCTCTCATTTCCTGTTCCTGAGTTCAAAGAGAGATCCCACTGGGTCATaGTCAGACTCTCCTCCAGGC +
Preference number: 4 (lower is better)
Translates to: PHLNMRHFSHFLFLSSKRDPTGS*SDSPPG
Trigger: GCCTGGAGGAGAGTCTGAGCATGACCCAGTGGGATC...TCTCTTTGAACTCAGGAACAGGAAATGAGAGAAATGTCTCATGTTCAAGTGTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
CDS-3UTR CCA 90 bp CTCTCATTTCCTGTTCCTGAGTTCAAAGAGACGACACACAGAATAGATTTCCTCGGGCACTGTGGTCACTaGCTGCACCACTTCATGCAT +
Preference number: 4 (lower is better)
Translates to: LSFPVPEFKETTHRIDFLGHCGH*LHHFMH
Trigger: ATGCATGAAGTGGTGCAGCCAGTGACCACAGTGCCC...GAGGAAATCTATTCTGTGTGTCGTCTCTTTGAACTCAGGAACAGGAAATGAGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
CDS-3UTR CCA 90 bp TTCACAATATGTGTCACTGTAAGTAGCCTGCATCTGTTTCCCTCATACCTATGTGATCGCTGCCGCACTTaGAAGCCAATGCCACAGGTC +
Preference number: 4 (lower is better)
Translates to: FTICVTVSSLHLFPSYLCDRCRT*KPMPQV
Trigger: GACCTGTGGCATTGGCTTCCAAGTGCGGCAGCGATC...ACATAGGTATGAGGGAAACAGATGCAGGCTACTTACAGTGACACATATTGTGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
CDS-3UTR CCA 90 bp CTCTCATTTCCTGTTCCTGAGTTCAAAGAGACGACACACAGAATAGATTTCCTCCTGTGGAGCAGCCACTaGTTCCATCGCTGGAACAGT +
Preference number: 4 (lower is better)
Translates to: LSFPVPEFKETTHRIDFLLWSSH*FHRWNS
Trigger: ACTGTTCCAGCGATGGAACCAGTGGCTGCTCCACAG...GAGGAAATCTATTCTGTGTGTCGTCTCTTTGAACTCAGGAACAGGAAATGAGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
CDS-3UTR CCA 90 bp AAATTTGAGGTAAGGGCCTGGCCAGCTCTCAGGAAGAATATCAATCCAGTGGGTAAAATGTTGCATTCCTaGAACTCCAGCGATGGGCCA +
Preference number: 4 (lower is better)
Translates to: KFEVRAWPALRKNINPVGKMLHS*NSSDGP
Trigger: TGGCCCATCGCTGGAGTTCCAGGAATGCAACATTTT...ACCCACTGGATTGATATTCTTCCTGAGAGCTGGCCAGGCCCTTACCTCAAATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
CDS-3UTR TCA 90 bp AAGTGCACTGTTTTGATATCTCCATGGAAACTGATATTTTTGATCCAGGAGACTCAGGTGGGGATGCTCTaGTCCCACTGGGTCATGCTC +
Preference number: 4 (lower is better)
Translates to: KCTVLISPWKLIFLIQETQVGML*SHWVML
Trigger: GAGCATGACCCAGTGGGATCAGAGCATCCCCACCTG...AGTCTCCTGGATCAAAAATATCAGTTTCCATGGAGATATCAAAACAGTGCACTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
CDS-3UTR GCA 90 bp TTCACAATATGTGTCACTGTAAGTAGCCTGCATCTGTTTCCCTCATACCTATGTCTTCCAGCAAACAGCTaGCTGAGCTCTGACTCAGGG +
Preference number: 4 (lower is better)
Translates to: FTICVTVSSLHLFPSYLCLPANS*LSSDSG
Trigger: CCCTGAGTCAGAGCTCAGGCAGCTGTTTGCTGGAAG...ACATAGGTATGAGGGAAACAGATGCAGGCTACTTACAGTGACACATATTGTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
CDS-3UTR CCA 90 bp CAACAACCAAATGTTTTCTATAGACCAGATTTTCACAACACCACATTTAGGCATCAGCTCTCTGGCACTTaGCAGGGTCCTGGGTCTCGG +
Preference number: 4 (lower is better)
Translates to: QQPNVFYRPDFHNTTFRHQLSGT*QGPGSR
Trigger: CCGAGACCCAGGACCCTGCCAAGTGCCAGAGAGCTG...ATGCCTAAATGTGGTGTTGTGAAAATCTGGTCTATAGAAAACATTTGGTTGTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
CDS-3UTR CCA 90 bp TTCACAATATGTGTCACTGTAAGTAGCCTGCATCTGTTTCCCTCATACCTATGTCCAGACTTCGGTAAATaGCTGGATCTCGCCCTGGGA +
Preference number: 4 (lower is better)
Translates to: FTICVTVSSLHLFPSYLCPDFGK*LDLALG
Trigger: TCCCAGGGCGAGATCCAGCCATTTACCGAAGTCTGG...ACATAGGTATGAGGGAAACAGATGCAGGCTACTTACAGTGACACATATTGTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
CDS-3UTR CCA 90 bp AAATTTGAGGTAAGGGCCTGGCCAGCTCTCAGGAAGAATATCAATCCAGTGGGTGAGCGAGAGTTTTCTTaGTACTTGAAGGGTCCATTG +
Preference number: 4 (lower is better)
Translates to: KFEVRAWPALRKNINPVGEREFS*YLKGPL
Trigger: CAATGGACCCTTCAAGTACCAAGAAAACTCTCGCTC...ACCCACTGGATTGATATTCTTCCTGAGAGCTGGCCAGGCCCTTACCTCAAATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
CDS-3UTR CCA 90 bp TTCACAATATGTGTCACTGTAAGTAGCCTGCATCTGTTTCCCTCATACCTATGTACAGGCCCTGGTCCATaGTGCCGCACTGAAAATTGG +
Preference number: 4 (lower is better)
Translates to: FTICVTVSSLHLFPSYLCTGPGP*CRTENW
Trigger: CCAATTTTCAGTGCGGCACCATGGACCAGGGCCTGT...ACATAGGTATGAGGGAAACAGATGCAGGCTACTTACAGTGACACATATTGTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
CDS-3UTR CCA 90 bp CCTCAAGGCCATAGATTAGTATGTATAGATCTTGGAAAATCTCCTTACATCACTACCACACTGAGGAGCTaGGCTGTCACAGGAGCGGGA +
Preference number: 4 (lower is better)
Translates to: PQGHRLVCIDLGKSPYITTTLRS*AVTGAG
Trigger: TCCCGCTCCTGTGACAGCCCAGCTCCTCAGTGTGGT...AGTGATGTAAGGAGATTTTCCAAGATCTATACATACTAATCTATGGCCTTGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
CDS-3UTR CCA 90 bp CAACAACCAAATGTTTTCTATAGACCAGATTTTCACAACACCACATTTAGGCATATGCCACCCCCGCACTaGGCTGTGCACCGTTCCCAA +
Preference number: 4 (lower is better)
Translates to: QQPNVFYRPDFHNTTFRHMPPPH*AVHRSQ
Trigger: TTGGGAACGGTGCACAGCCCAGTGCGGGGGTGGCAT...ATGCCTAAATGTGGTGTTGTGAAAATCTGGTCTATAGAAAACATTTGGTTGTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
3UTR CAA 72 bp TTGGTAGCGATGGGAAAGTCCTGGTTTGAAATGCACTaGAAATGGTTCCACACGTCATCTCTGAAGCCTCAG +
Preference number: 4 (lower is better)
Translates to: LVAMGKSWFEMH*KWFHTSSLKPQ
Trigger: CTGAGGCTTCAGAGATGACGTGTGGAACCATTTCAAGTGCATTTCAAACCAGGACTTTCCCATCGCTACCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
3UTR CAA 72 bp CAGCTTTACACACCTTTAATGCTCTTGATAGGGGCCTaGCTGCACATTAGCCACATCAGAGATGCTGAGTAC +
Preference number: 4 (lower is better)
Translates to: QLYTPLMLLIGA*LHISHIRDAEY
Trigger: GTACTCAGCATCTCTGATGTGGCTAATGTGCAGCAAGGCCCCTATCAAGAGCATTAAAGGTGTGTAAAGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
3UTR CAA 72 bp TGCAAGGAGGAACAGCTTTACACACCTTTAATGCTCTaGATAGGGGCCTTGCTGCACATTAGCCACATCAGA +
Preference number: 4 (lower is better)
Translates to: CKEEQLYTPLML*IGALLHISHIR
Trigger: TCTGATGTGGCTAATGTGCAGCAAGGCCCCTATCAAGAGCATTAAAGGTGTGTAAAGCTGTTCCTCCTTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
3UTR CAA 72 bp CCTGTTAGTCAACAGGGTCCAGATCAAACACATGGATaGGTCCTTCCTAGGGACAGAGACATTTCCATAGCA +
Preference number: 4 (lower is better)
Translates to: PVSQQGPDQTHG*VLPRDRDISIA
Trigger: TGCTATGGAAATGTCTCTGTCCCTAGGAAGGACCAATCCATGTGTTTGATCTGGACCCTGTTGACTAACAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
3UTR CAA 72 bp GCAGAATCTTACACTGGGAAAAGCTGGTGCATCTTATaGGCAGATGAGGTGAGCATCATGGTGATTCAGTGG +
Preference number: 4 (lower is better)
Translates to: AESYTGKSWCIL*ADEVSIMVIQW
Trigger: CCACTGAATCACCATGATGCTCACCTCATCTGCCAATAAGATGCACCAGCTTTTCCCAGTGTAAGATTCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
CDS-3UTR TCA 90 bp AAGTGCACTGTTTTGATATCTCCATGGAAACTGATATTTTTGATCCAGGAGACTCATTGGTCCCACAGGTaGATAGCCGGTCCCCACCAA +
Preference number: 4 (lower is better)
Translates to: KCTVLISPWKLIFLIQETHWSHR*IAGPHQ
Trigger: TTGGTGGGGACCGGCTATTCACCTGTGGGACCAATG...AGTCTCCTGGATCAAAAATATCAGTTTCCATGGAGATATCAAAACAGTGCACTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
CDS-3UTR TCA 90 bp AGGGCAAATACTGACAGCCAAACACAGGGGCTTAATAGTGTGGCTTGCCTATTGCTTCATGCATCAGAATaGACTTCTGAGCATCCTGTA +
Preference number: 4 (lower is better)
Translates to: RANTDSQTQGLNSVACLLLHASE*TSEHPV
Trigger: TACAGGATGCTCAGAAGTTCATTCTGATGCATGAAG...CAATAGGCAAGCCACACTATTAAGCCCCTGTGTTTGGCTGTCAGTATTTGCCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
CDS-3UTR TCA 90 bp CTCTCATTTCCTGTTCCTGAGTTCAAAGAGACGACACACAGAATAGATTTCCTCACATTTAGACCAGGATaGCCAGCAAGACCACACACC +
Preference number: 4 (lower is better)
Translates to: LSFPVPEFKETTHRIDFLTFRPG*PARPHT
Trigger: GGTGTGTGGTCTTGCTGGTCATCCTGGTCTAAATGT...GAGGAAATCTATTCTGTGTGTCGTCTCTTTGAACTCAGGAACAGGAAATGAGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
CDS-3UTR TCA 90 bp CCACACTTGAACATGAGACATTTCTCTCATTTCCTGTTCCTGAGTTCAAAGAGATGTAGACAAGCAGTGTaGGGAGGCAGCCAAGAATGG +
Preference number: 4 (lower is better)
Translates to: PHLNMRHFSHFLFLSSKRCRQAV*GGSQEW
Trigger: CCATTCTTGGCTGCCTCCTCACACTGCTTGTCTACA...TCTCTTTGAACTCAGGAACAGGAAATGAGAGAAATGTCTCATGTTCAAGTGTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
CDS-3UTR GCA 90 bp CTCTCATTTCCTGTTCCTGAGTTCAAAGAGACGACACACAGAATAGATTTCCTCCCTTCGATTTGCCCTTaGTGTAACAGGCCTTCTTGG +
Preference number: 4 (lower is better)
Translates to: LSFPVPEFKETTHRIDFLPSICP*CNRPSW
Trigger: CCAAGAAGGCCTGTTACAGCAAGGGCAAATCGAAGG...GAGGAAATCTATTCTGTGTGTCGTCTCTTTGAACTCAGGAACAGGAAATGAGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
CDS-3UTR GCA 90 bp TTATTTTCCATCATAAATGTTGAAGAATTTTCTCCTCATGGAGGGAGGGAGGAATGGCTGTGGAGGATCTaGAGGCTCCTGATGGGCTCA +
Preference number: 4 (lower is better)
Translates to: LFSIINVEEFSPHGGREEWLWRI*RLLMGS
Trigger: TGAGCCCATCAGGAGCCTGCAGATCCTCCACAGCCA...TTCCTCCCTCCCTCCATGAGGAGAAAATTCTTCAACATTTATGATGGAAAATAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
CDS-3UTR CCA 90 bp TTCACAATATGTGTCACTGTAAGTAGCCTGCATCTGTTTCCCTCATACCTATGTGCCCTGGGAAATCCATaGCTGTTGCAGCATAGAGCT +
Preference number: 4 (lower is better)
Translates to: FTICVTVSSLHLFPSYLCALGNP*LLQHRA
Trigger: AGCTCTATGCTGCAACAGCCATGGATTTCCCAGGGC...ACATAGGTATGAGGGAAACAGATGCAGGCTACTTACAGTGACACATATTGTGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
CDS-3UTR TCA 90 bp TTGCACTGGATGGTTTTGAAGAAAAAGTCTAGGACTATGTTGACAGAGGTTTTTAGCGGGCCATGCCACTaGTCTGATCATGGATCTCAG +
Preference number: 4 (lower is better)
Translates to: LHWMVLKKKSRTMLTEVFSGPCH*SDHGSQ
Trigger: CTGAGATCCATGATCAGATCAGTGGCATGGCCCGCT...AAAAACCTCTGTCAACATAGTCCTAGACTTTTTCTTCAAAACCATCCAGTGCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
CDS-3UTR TCA 90 bp TTATTTTCCATCATAAATGTTGAAGAATTTTCTCCTCATGGAGGGAGGGAGGAAAGATGGCGCTCAGGTTaGAGACACAGACAGCAGAGG +
Preference number: 4 (lower is better)
Translates to: LFSIINVEEFSPHGGREERWRSG*RHRQQR
Trigger: CCTCTGCTGTCTGTGTCTTCAACCTGAGCGCCATCT...TTCCTCCCTCCCTCCATGAGGAGAAAATTCTTCAACATTTATGATGGAAAATAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
CDS-3UTR CCA 90 bp CAACAACCAAATGTTTTCTATAGACCAGATTTTCACAACACCACATTTAGGCATAGGACACTCTGGCTGTaGAGGATCTGCAGGCTCCTG +
Preference number: 4 (lower is better)
Translates to: QQPNVFYRPDFHNTTFRHRTLWL*RICRLL
Trigger: CAGGAGCCTGCAGATCCTCCACAGCCAGAGTGTCCT...ATGCCTAAATGTGGTGTTGTGAAAATCTGGTCTATAGAAAACATTTGGTTGTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
CDS-3UTR CCA 90 bp CCACACTTGAACATGAGACATTTCTCTCATTTCCTGTTCCTGAGTTCAAAGAGAACATTGGCTGCCCACTaGAAACAGAAGGATGCACTG +
Preference number: 4 (lower is better)
Translates to: PHLNMRHFSHFLFLSSKRTLAAH*KQKDAL
Trigger: CAGTGCATCCTTCTGTTTCCAGTGGGCAGCCAATGT...TCTCTTTGAACTCAGGAACAGGAAATGAGAGAAATGTCTCATGTTCAAGTGTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
3UTR CAA 72 bp TGGAACAGGGCCACTTCATCTGGACACAACACACTCTaGATCTGTTTTGAGAGCAAAACCACACTTGAACAT +
Preference number: 4 (lower is better)
Translates to: WNRATSSGHNTL*ICFESKTTLEH
Trigger: ATGTTCAAGTGTGGTTTTGCTCTCAAAACAGATCAAGAGTGTGTTGTGTCCAGATGAAGTGGCCCTGTTCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
CDS-3UTR TCA 90 bp CAACAACCAAATGTTTTCTATAGACCAGATTTTCACAACACCACATTTAGGCATCCACACTCCCAGGCTTaGGAACAGCCATGCAAGGAT +
Preference number: 4 (lower is better)
Translates to: QQPNVFYRPDFHNTTFRHPHSQA*EQPCKD
Trigger: ATCCTTGCATGGCTGTTCTCAAGCCTGGGAGTGTGG...ATGCCTAAATGTGGTGTTGTGAAAATCTGGTCTATAGAAAACATTTGGTTGTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
CDS-3UTR TCA 90 bp TTATTTTCCATCATAAATGTTGAAGAATTTTCTCCTCATGGAGGGAGGGAGGAAACTCCACAGCCTGGATaGGAGACAGATCCTCAAGCT +
Preference number: 4 (lower is better)
Translates to: LFSIINVEEFSPHGGREETPQPG*ETDPQA
Trigger: AGCTTGAGGATCTGTCTCTCATCCAGGCTGTGGAGT...TTCCTCCCTCCCTCCATGAGGAGAAAATTCTTCAACATTTATGATGGAAAATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
CDS-3UTR TCA 90 bp TTATTTTCCATCATAAATGTTGAAGAATTTTCTCCTCATGGAGGGAGGGAGGAATCCATTGAAGGCCTGTaGGATGGCGCTCAGGTTGAA +
Preference number: 4 (lower is better)
Translates to: LFSIINVEEFSPHGGREESIEGL*DGAQVE
Trigger: TTCAACCTGAGCGCCATCTCACAGGCCTTCAATGGA...TTCCTCCCTCCCTCCATGAGGAGAAAATTCTTCAACATTTATGATGGAAAATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
CDS-3UTR TCA 90 bp CCTCAAGGCCATAGATTAGTATGTATAGATCTTGGAAAATCTCCTTACATCACTAGCTCCCATCTACAGTaGGATTTCTGGTCGGACAGG +
Preference number: 4 (lower is better)
Translates to: PQGHRLVCIDLGKSPYITSSHLQ*DFWSDR
Trigger: CCTGTCCGACCAGAAATCTCACTGTAGATGGGAGCT...AGTGATGTAAGGAGATTTTCCAAGATCTATACATACTAATCTATGGCCTTGAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
CDS-3UTR TCA 90 bp TTGCACTGGATGGTTTTGAAGAAAAAGTCTAGGACTATGTTGACAGAGGTTTTTGCCCCATTGACTGTATaGGCAGAGTATCTCCCAGCT +
Preference number: 4 (lower is better)
Translates to: LHWMVLKKKSRTMLTEVFAPLTV*AEYLPA
Trigger: AGCTGGGAGATACTCTGCTCATACAGTCAATGGGGC...AAAAACCTCTGTCAACATAGTCCTAGACTTTTTCTTCAAAACCATCCAGTGCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
CDS-3UTR GCA 90 bp TTCACAATATGTGTCACTGTAAGTAGCCTGCATCTGTTTCCCTCATACCTATGTTTCCACATTGCATCCTaGACAGTCAGGCCCATTTTC +
Preference number: 4 (lower is better)
Translates to: FTICVTVSSLHLFPSYLCFHIAS*TVRPIF
Trigger: GAAAATGGGCCTGACTGTGCAGGATGCAATGTGGAA...ACATAGGTATGAGGGAAACAGATGCAGGCTACTTACAGTGACACATATTGTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
CDS-3UTR GCA 90 bp TTATTTTCCATCATAAATGTTGAAGAATTTTCTCCTCATGGAGGGAGGGAGGAAGATGTCCCCTCCATATaGTGGGGCTGGATTCGAACA +
Preference number: 4 (lower is better)
Translates to: LFSIINVEEFSPHGGREEDVPSI*WGWIRT
Trigger: TGTTCGAATCCAGCCCCAGCATATGGAGGGGACATC...TTCCTCCCTCCCTCCATGAGGAGAAAATTCTTCAACATTTATGATGGAAAATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
CDS-3UTR GCA 90 bp TTGCACTGGATGGTTTTGAAGAAAAAGTCTAGGACTATGTTGACAGAGGTTTTTCTGTGTGTTGCAGAGTaGCTCTTCTGTGTGCAGTCC +
Preference number: 4 (lower is better)
Translates to: LHWMVLKKKSRTMLTEVFLCVAE*LFCVQS
Trigger: GGACTGCACACAGAAGAGGCACTCTGCAACACACAG...AAAAACCTCTGTCAACATAGTCCTAGACTTTTTCTTCAAAACCATCCAGTGCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
CDS-3UTR GCA 90 bp TTGCACTGGATGGTTTTGAAGAAAAAGTCTAGGACTATGTTGACAGAGGTTTTTGGCAGGTCTGTGTGTTaGAGAGTGCCTCTTCTGTGT +
Preference number: 4 (lower is better)
Translates to: LHWMVLKKKSRTMLTEVFGRSVC*RVPLLC
Trigger: ACACAGAAGAGGCACTCTGCAACACACAGACCTGCC...AAAAACCTCTGTCAACATAGTCCTAGACTTTTTCTTCAAAACCATCCAGTGCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
CDS-3UTR GCA 90 bp TTCACAATATGTGTCACTGTAAGTAGCCTGCATCTGTTTCCCTCATACCTATGTTTCCAGAACATTGGCTaGCCACTGGAAACAGAAGGA +
Preference number: 4 (lower is better)
Translates to: FTICVTVSSLHLFPSYLCFQNIG*PLETEG
Trigger: TCCTTCTGTTTCCAGTGGGCAGCCAATGTTCTGGAA...ACATAGGTATGAGGGAAACAGATGCAGGCTACTTACAGTGACACATATTGTGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
CDS-3UTR CCA 90 bp TTATTTTCCATCATAAATGTTGAAGAATTTTCTCCTCATGGAGGGAGGGAGGAATCCCACTCCACAGCCTaGATGAGAGACAGATCCTCA +
Preference number: 4 (lower is better)
Translates to: LFSIINVEEFSPHGGREESHSTA*MRDRSS
Trigger: TGAGGATCTGTCTCTCATCCAGGCTGTGGAGTGGGA...TTCCTCCCTCCCTCCATGAGGAGAAAATTCTTCAACATTTATGATGGAAAATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
CDS-3UTR CCA 90 bp CAACAACCAAATGTTTTCTATAGACCAGATTTTCACAACACCACATTTAGGCATAATTGGGGTTGGGGTTaGGATAAGGCAGCCAGGCTG +
Preference number: 4 (lower is better)
Translates to: QQPNVFYRPDFHNTTFRHNWGWG*DKAARL
Trigger: CAGCCTGGCTGCCTTATCCCAACCCCAACCCCAATT...ATGCCTAAATGTGGTGTTGTGAAAATCTGGTCTATAGAAAACATTTGGTTGTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
CDS-3UTR CCA 90 bp AAATTTGAGGTAAGGGCCTGGCCAGCTCTCAGGAAGAATATCAATCCAGTGGGTTGCCACAGATACTTCTaGGATGAAATTAGAGTCAAA +
Preference number: 4 (lower is better)
Translates to: KFEVRAWPALRKNINPVGCHRYF*DEIRVK
Trigger: TTTGACTCTAATTTCATCCCAGAAGTATCTGTGGCA...ACCCACTGGATTGATATTCTTCCTGAGAGCTGGCCAGGCCCTTACCTCAAATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
3UTR CAA 72 bp AACACCACATTTAGGCATTTAAGGGTGTGCACTTTTTaGGTAGCGATGGGAAAGTCCTGGTTTGAAATGCAC +
Preference number: 4 (lower is better)
Translates to: NTTFRHLRVCTF*VAMGKSWFEMH
Trigger: GTGCATTTCAAACCAGGACTTTCCCATCGCTACCAAAAAAGTGCACACCCTTAAATGCCTAAATGTGGTGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
3UTR CAA 72 bp AATATAGCTCAAGGCATTCCTAAGGAATTGCTCCAATaGTTCAGCAAAATAAGAGAAAGGGACCCGTGGTGG +
Preference number: 4 (lower is better)
Translates to: NIAQGIPKELLQ*FSKIRERDPWW
Trigger: CCACCACGGGTCCCTTTCTCTTATTTTGCTGAACAATTGGAGCAATTCCTTAGGAATGCCTTGAGCTATATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
CDS-3UTR TCA 90 bp CCACACTTGAACATGAGACATTTCTCTCATTTCCTGTTCCTGAGTTCAAAGAGACCTCAAGCTCTAATCTaGAGAGATAGTTTCTCGCTC +
Preference number: 4 (lower is better)
Translates to: PHLNMRHFSHFLFLSSKRPQALI*RDSFSL
Trigger: GAGCGAGAAACTATCTCTTCAGATTAGAGCTTGAGG...TCTCTTTGAACTCAGGAACAGGAAATGAGAGAAATGTCTCATGTTCAAGTGTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
CDS-3UTR CCA 90 bp TTATTTTCCATCATAAATGTTGAAGAATTTTCTCCTCATGGAGGGAGGGAGGAATGCCGCACTGAAAATTaGGGTTGGGGTTGGGATAAG +
Preference number: 4 (lower is better)
Translates to: LFSIINVEEFSPHGGREECRTEN*GWGWDK
Trigger: CTTATCCCAACCCCAACCCCAATTTTCAGTGCGGCA...TTCCTCCCTCCCTCCATGAGGAGAAAATTCTTCAACATTTATGATGGAAAATAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
CDS-3UTR CCA 90 bp TTATTTTCCATCATAAATGTTGAAGAATTTTCTCCTCATGGAGGGAGGGAGGAAACATCAACAGCTAAGTaGGAGAAGCGGCTGTTGTCC +
Preference number: 4 (lower is better)
Translates to: LFSIINVEEFSPHGGREETSTAK*EKRLLS
Trigger: GGACAACAGCCGCTTCTCCCACTTAGCTGTTGATGT...TTCCTCCCTCCCTCCATGAGGAGAAAATTCTTCAACATTTATGATGGAAAATAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
CDS-3UTR CCA 90 bp CCTCAAGGCCATAGATTAGTATGTATAGATCTTGGAAAATCTCCTTACATCACTGCATGCCCCCAAACTTaGGTTCTGGGTTGTTGCAAA +
Preference number: 4 (lower is better)
Translates to: PQGHRLVCIDLGKSPYITACPQT*VLGCCK
Trigger: TTTGCAACAACCCAGAACCCAAGTTTGGGGGCATGC...AGTGATGTAAGGAGATTTTCCAAGATCTATACATACTAATCTATGGCCTTGAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
CDS-3UTR CCA 90 bp TTCACAATATGTGTCACTGTAAGTAGCCTGCATCTGTTTCCCTCATACCTATGTGTATTTCCAGAACATTaGCTGCCCACTGGAAACAGA +
Preference number: 4 (lower is better)
Translates to: FTICVTVSSLHLFPSYLCVFPEH*LPTGNR
Trigger: TCTGTTTCCAGTGGGCAGCCAATGTTCTGGAAATAC...ACATAGGTATGAGGGAAACAGATGCAGGCTACTTACAGTGACACATATTGTGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
CDS-3UTR CCA 90 bp TTATTTTCCATCATAAATGTTGAAGAATTTTCTCCTCATGGAGGGAGGGAGGAACCCACGGCCATCATGTaGAACATGTTGAACTCTCCA +
Preference number: 4 (lower is better)
Translates to: LFSIINVEEFSPHGGREEPTAIM*NMLNSP
Trigger: TGGAGAGTTCAACATGTTCCACATGATGGCCGTGGG...TTCCTCCCTCCCTCCATGAGGAGAAAATTCTTCAACATTTATGATGGAAAATAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
CDS-3UTR GCA 90 bp CCTCAAGGCCATAGATTAGTATGTATAGATCTTGGAAAATCTCCTTACATCACTATTCCTCCTTCGATTTaGCCTTGCTGTAACAGGCCT +
Preference number: 4 (lower is better)
Translates to: PQGHRLVCIDLGKSPYITIPPSI*PCCNRP
Trigger: AGGCCTGTTACAGCAAGGGCAAATCGAAGGAGGAAT...AGTGATGTAAGGAGATTTTCCAAGATCTATACATACTAATCTATGGCCTTGAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
CDS-3UTR GCA 90 bp TTATTTTCCATCATAAATGTTGAAGAATTTTCTCCTCATGGAGGGAGGGAGGAAGAAATCCATGGCTGTTaGAGCATAGAGCTCACCACT +
Preference number: 4 (lower is better)
Translates to: LFSIINVEEFSPHGGREEEIHGC*SIELTT
Trigger: AGTGGTGAGCTCTATGCTGCAACAGCCATGGATTTC...TTCCTCCCTCCCTCCATGAGGAGAAAATTCTTCAACATTTATGATGGAAAATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
CDS-3UTR GCA 90 bp AAGTGCACTGTTTTGATATCTCCATGGAAACTGATATTTTTGATCCAGGAGACTTACGCTGCTGGATCTTaGCACAGATACTTCTGGGAT +
Preference number: 4 (lower is better)
Translates to: KCTVLISPWKLIFLIQETYAAGS*HRYFWD
Trigger: ATCCCAGAAGTATCTGTGGCAAGATCCAGCAGCGTA...AGTCTCCTGGATCAAAAATATCAGTTTCCATGGAGATATCAAAACAGTGCACTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
CDS-3UTR CCA 90 bp CAACAACCAAATGTTTTCTATAGACCAGATTTTCACAACACCACATTTAGGCATACTTCGGTAAATGGCTaGATCTCGCCCTGGGAAATC +
Preference number: 4 (lower is better)
Translates to: QQPNVFYRPDFHNTTFRHTSVNG*ISPWEI
Trigger: GATTTCCCAGGGCGAGATCCAGCCATTTACCGAAGT...ATGCCTAAATGTGGTGTTGTGAAAATCTGGTCTATAGAAAACATTTGGTTGTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
CDS-3UTR CCA 90 bp TTATTTTCCATCATAAATGTTGAAGAATTTTCTCCTCATGGAGGGAGGGAGGAACTCACTCCTCCTCTCTaGGAAAAGCTCAATCTCTTC +
Preference number: 4 (lower is better)
Translates to: LFSIINVEEFSPHGGREELTPPL*EKLNLF
Trigger: GAAGAGATTGAGCTTTTCCCAGAGAGGAGGAGTGAG...TTCCTCCCTCCCTCCATGAGGAGAAAATTCTTCAACATTTATGATGGAAAATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
CDS-3UTR CCA 90 bp CCTCAAGGCCATAGATTAGTATGTATAGATCTTGGAAAATCTCCTTACATCACTCACTGGTTCCATCGCTaGAACAGTACCGCATTTCTA +
Preference number: 4 (lower is better)
Translates to: PQGHRLVCIDLGKSPYITHWFHR*NSTAFL
Trigger: TAGAAATGCGGTACTGTTCCAGCGATGGAACCAGTG...AGTGATGTAAGGAGATTTTCCAAGATCTATACATACTAATCTATGGCCTTGAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
CDS-3UTR GCA 90 bp TTATTTTCCATCATAAATGTTGAAGAATTTTCTCCTCATGGAGGGAGGGAGGAAGACAAGGTAAAATGTTaGATTCCTGGAACTCCAGCG +
Preference number: 4 (lower is better)
Translates to: LFSIINVEEFSPHGGREEDKVKC*IPGTPA
Trigger: CGCTGGAGTTCCAGGAATGCAACATTTTACCTTGTC...TTCCTCCCTCCCTCCATGAGGAGAAAATTCTTCAACATTTATGATGGAAAATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
CDS-3UTR CCA 90 bp CCACACTTGAACATGAGACATTTCTCTCATTTCCTGTTCCTGAGTTCAAAGAGAGGAAGACACAAAGTTTaGTTCATTGAGCCATTTGGA +
Preference number: 4 (lower is better)
Translates to: PHLNMRHFSHFLFLSSKRGRHKV*FIEPFG
Trigger: TCCAAATGGCTCAATGAACCAAACTTTGTGTCTTCC...TCTCTTTGAACTCAGGAACAGGAAATGAGAGAAATGTCTCATGTTCAAGTGTGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
CDS-3UTR CCA 90 bp CAACAACCAAATGTTTTCTATAGACCAGATTTTCACAACACCACATTTAGGCATCCAGAACACGTGTGGTaGGCAGAGCAAATGTTCATT +
Preference number: 4 (lower is better)
Translates to: QQPNVFYRPDFHNTTFRHPEHVW*AEQMFI
Trigger: AATGAACATTTGCTCTGCCCACCACACGTGTTCTGG...ATGCCTAAATGTGGTGTTGTGAAAATCTGGTCTATAGAAAACATTTGGTTGTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
CDS-3UTR CCA 90 bp TTATTTTCCATCATAAATGTTGAAGAATTTTCTCCTCATGGAGGGAGGGAGGAATACTTCCAGCAAATTTaGATCTGGCAGGCGAGCTTT +
Preference number: 4 (lower is better)
Translates to: LFSIINVEEFSPHGGREEYFQQI*IWQASF
Trigger: AAAGCTCGCCTGCCAGATCCAAATTTGCTGGAAGTA...TTCCTCCCTCCCTCCATGAGGAGAAAATTCTTCAACATTTATGATGGAAAATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
CDS-3UTR CCA 90 bp CAACAACCAAATGTTTTCTATAGACCAGATTTTCACAACACCACATTTAGGCATCCCAAACTTGGGTTCTaGGTTGTTGCAAACACGCTT +
Preference number: 4 (lower is better)
Translates to: QQPNVFYRPDFHNTTFRHPKLGF*VVANTL
Trigger: AAGCGTGTTTGCAACAACCCAGAACCCAAGTTTGGG...ATGCCTAAATGTGGTGTTGTGAAAATCTGGTCTATAGAAAACATTTGGTTGTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
CDS-3UTR CCA 90 bp TTCACAATATGTGTCACTGTAAGTAGCCTGCATCTGTTTCCCTCATACCTATGTCTTCCCAGTGAGATGTaGGTTGAAGTATTTGTTTCT +
Preference number: 4 (lower is better)
Translates to: FTICVTVSSLHLFPSYLCLPSEM*VEVFVS
Trigger: AGAAACAAATACTTCAACCCACATCTCACTGGGAAG...ACATAGGTATGAGGGAAACAGATGCAGGCTACTTACAGTGACACATATTGTGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
3UTR CAA 72 bp GAAAAGCAGAATATAGCTCAAGGCATTCCTAAGGAATaGCTCCAATTGTTCAGCAAAATAAGAGAAAGGGAC +
Preference number: 4 (lower is better)
Translates to: EKQNIAQGIPKE*LQLFSKIRERD
Trigger: GTCCCTTTCTCTTATTTTGCTGAACAATTGGAGCAATTCCTTAGGAATGCCTTGAGCTATATTCTGCTTTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
3UTR CAA 72 bp TTTAATGAAATATACTATTTGCACCAGGCTCTGAATTaGGTATCCAGGAGACTGCATACAGTCTTTGCAGTC +
Preference number: 4 (lower is better)
Translates to: FNEIYYLHQALN*VSRRLHTVFAV
Trigger: GACTGCAAAGACTGTATGCAGTCTCCTGGATACCAAATTCAGAGCCTGGTGCAAATAGTATATTTCATTAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
CDS-3UTR TCA 90 bp TTGCACTGGATGGTTTTGAAGAAAAAGTCTAGGACTATGTTGACAGAGGTTTTTCAAAGTTTGGTTCATTaGGCCATTTGGAGTTGTACT +
Preference number: 4 (lower is better)
Translates to: LHWMVLKKKSRTMLTEVFQSLVH*AIWSCT
Trigger: AGTACAACTCCAAATGGCTCAATGAACCAAACTTTG...AAAAACCTCTGTCAACATAGTCCTAGACTTTTTCTTCAAAACCATCCAGTGCAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
CDS-3UTR GCA 90 bp TTGCACTGGATGGTTTTGAAGAAAAAGTCTAGGACTATGTTGACAGAGGTTTTTGTTGTTTTTGTTAAATaGCTTGATGGCCTCCACAGA +
Preference number: 4 (lower is better)
Translates to: LHWMVLKKKSRTMLTEVFVVFVK*LDGLHR
Trigger: TCTGTGGAGGCCATCAAGGCATTTAACAAAAACAAC...AAAAACCTCTGTCAACATAGTCCTAGACTTTTTCTTCAAAACCATCCAGTGCAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
CDS-3UTR TCA 90 bp CCTCAAGGCCATAGATTAGTATGTATAGATCTTGGAAAATCTCCTTACATCACTTGTTTACATTGGTGGTaGAGATACCATAGATCAGAT +
Preference number: 4 (lower is better)
Translates to: PQGHRLVCIDLGKSPYITCLHWW*RYHRSD
Trigger: ATCTGATCTATGGTATCTTCACCACCAATGTAAACA...AGTGATGTAAGGAGATTTTCCAAGATCTATACATACTAATCTATGGCCTTGAGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
3UTR CAA 72 bp TATTGCTGCTTTTGTCTTTCTGATCAAAGAGTATCCTaGATCAGTTTAGTTACATGTACAGTATGTTCCCAG +
Preference number: 4 (lower is better)
Translates to: YCCFCLSDQRVS*ISLVTCTVCSQ
Trigger: CTGGGAACATACTGTACATGTAACTAAACTGATCAAGGATACTCTTTGATCAGAAAGACAAAAGCAGCAATA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
CDS GCA 90 bp TCTGGCCCACGCACACGCGCCCGCCATGCCTGGGCGTGGGGTTGCTaGAGGATCGCTGCCGCACTTGGAAGCCAATGCCACAGGTCGTGC +
Preference number: 5 (lower is better)
Translates to: SGPRTRARHAWAWGC*RIAAALGSQCHRSC
Trigger: GCACGACCTGTGGCATTGGCTTCCAAGTGCGGCAGCGATCCTGCAGCAACCCCACGCCCAGGCATGGCGGGCGCGTGTGCGTGGGCCAGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
CDS GCA 90 bp TGTTCTGGCCCACGCACACGCGCCCGCCATGCCTGGGCGTGGGGTTaGTGCAGGATCGCTGCCGCACTTGGAAGCCAATGCCACAGGTCG +
Preference number: 5 (lower is better)
Translates to: CSGPRTRARHAWAWG*CRIAAALGSQCHRS
Trigger: CGACCTGTGGCATTGGCTTCCAAGTGCGGCAGCGATCCTGCAGCAACCCCACGCCCAGGCATGGCGGGCGCGTGTGCGTGGGCCAGAACA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
CDS GCA 90 bp CACAGGTCCTCCGGCGGGCTTGAATGCCACCCCCGCACTGGGCTGTaGACCGTTCCCAAGGTCCCCAGCCTGTCCAGAACACGTGTGGTG +
Preference number: 5 (lower is better)
Translates to: HRSSGGLECHPRTGL*TVPKVPSLSRTRVV
Trigger: CACCACACGTGTTCTGGACAGGCTGGGGACCTTGGGAACGGTGCACAGCCCAGTGCGGGGGTGGCATTCAAGCCCGCCGGAGGACCTGTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
CDS TCA 90 bp CATCCTGCACAGTCAGGCCCATTTTCACAGGTCCTCCGGCGGGCTTaGATGCCACCCCCGCACTGGGCTGTGCACCGTTCCCAAGGTCCC +
Preference number: 5 (lower is better)
Translates to: HPAQSGPFSQVLRRA*MPPPHWAVHRSQGP
Trigger: GGGACCTTGGGAACGGTGCACAGCCCAGTGCGGGGGTGGCATTCAAGCCCGCCGGAGGACCTGTGAAAATGGGCCTGACTGTGCAGGATG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
CDS GCA 90 bp TGCAGGATCGCTGCCGCACTTGGAAGCCAATGCCACAGGTCGTGCTaGACGGAGACCAGGAGGTCCAGGGAGTCCAGCCTCCATTCCTGG +
Preference number: 5 (lower is better)
Translates to: CRIAAALGSQCHRSC*TETRRSRESSLHSW
Trigger: CCAGGAATGGAGGCTGGACTCCCTGGACCTCCTGGTCTCCGTGCAGCACGACCTGTGGCATTGGCTTCCAAGTGCGGCAGCGATCCTGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
CDS TCA 90 bp TTGGTGATCTCCATTCTAGGGCCCTCACACTGCCAACCACCACACTaGGGAGCTGGGCTGTCACAGGAGCGGGACCGGCAGAGGCAGGAG +
Preference number: 5 (lower is better)
Translates to: LVISILGPSHCQPPH*GAGLSQERDRQRQE
Trigger: CTCCTGCCTCTGCCGGTCCCGCTCCTGTGACAGCCCAGCTCCTCAGTGTGGTGGTTGGCAGTGTGAGGGCCCTAGAATGGAGATCACCAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
CDS-3UTR CAA 90 bp AACAGTGATGACAGTCACTGCCCCAGACCAAAGCAGCGGGTCTCAGTAGACCACGGTCCTCCGGCGGGCTaGAATGCCACCCCCGCACTG +
Preference number: 5 (lower is better)
Translates to: NSDDSHCPRPKQRVSVDHGPPAG*NATPAL
Trigger: CAGTGCGGGGGTGGCATTCAAGCCCGCCGGAGGACC...GTGGTCTACTGAGACCCGCTGCTTTGGTCTGGGGCAGTGACTGTCATCACTGTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
CDS CCA 90 bp CTCCAGCGATGGGCCAAGGCATGGCATGCCCCCAAACTTGGGTTCTaGGTTGTTGCAAACACGCTTCCGGTTCCGAATGCCCCTGCTGCA +
Preference number: 5 (lower is better)
Translates to: LQRWAKAWHAPKLGF*VVANTLPVPNAPAA
Trigger: TGCAGCAGGGGCATTCGGAACCGGAAGCGTGTTTGCAACAACCCAGAACCCAAGTTTGGGGGCATGCCATGCCTTGGCCCATCGCTGGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
CDS CCA 90 bp CCTGGAACTCCAGCGATGGGCCAAGGCATGGCATGCCCCCAAACTTaGGTTCTGGGTTGTTGCAAACACGCTTCCGGTTCCGAATGCCCC +
Preference number: 5 (lower is better)
Translates to: PGTPAMGQGMACPQT*VLGCCKHASGSECP
Trigger: GGGGCATTCGGAACCGGAAGCGTGTTTGCAACAACCCAGAACCCAAGTTTGGGGGCATGCCATGCCTTGGCCCATCGCTGGAGTTCCAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
CDS GCA 90 bp TGGGTTCTGGGTTGTTGCAAACACGCTTCCGGTTCCGAATGCCCCTaGTGCAGTCTCTGCTGCACTGTGACCAGGAAGTCCAGGCTGACC +
Preference number: 5 (lower is better)
Translates to: WVLGCCKHASGSECP*CSLCCTVTRKSRLT
Trigger: GGTCAGCCTGGACTTCCTGGTCACAGTGCAGCAGAGACTGCAGCAGGGGCATTCGGAACCGGAAGCGTGTTTGCAACAACCCAGAACCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
CDS GCA 90 bp ATGGGCCAAGGCATGGCATGCCCCCAAACTTGGGTTCTGGGTTGTTaGAAACACGCTTCCGGTTCCGAATGCCCCTGCTGCAGTCTCTGC +
Preference number: 5 (lower is better)
Translates to: MGQGMACPQTWVLGC*KHASGSECPCCSLC
Trigger: GCAGAGACTGCAGCAGGGGCATTCGGAACCGGAAGCGTGTTTGCAACAACCCAGAACCCAAGTTTGGGGGCATGCCATGCCTTGGCCCAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
CDS CCA 90 bp TGGCTGCCCACTGGAAACAGAAGGATGCACTGCCGAGCACGGACCTaGGTACCAGATGCATCGCACACAGACCAGTCTGACCACTCTGAC +
Preference number: 5 (lower is better)
Translates to: WLPTGNRRMHCRART*VPDASHTDQSDHSD
Trigger: GTCAGAGTGGTCAGACTGGTCTGTGTGCGATGCATCTGGTACCCAGGTCCGTGCTCGGCAGTGCATCCTTCTGTTTCCAGTGGGCAGCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
CDS-3UTR CAA 90 bp AACAGTGATGACAGTCACTGCCCCAGACCAAAGCAGCGGGTCTCAGTAGACCACTCAGCTCTCTGGCACTaGGCAGGGTCCTGGGTCTCG +
Preference number: 5 (lower is better)
Translates to: NSDDSHCPRPKQRVSVDHSALWH*AGSWVS
Trigger: CGAGACCCAGGACCCTGCCAAGTGCCAGAGAGCTGA...GTGGTCTACTGAGACCCGCTGCTTTGGTCTGGGGCAGTGACTGTCATCACTGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
CDS TCA 90 bp TACAGGGTGTCCACGGTGACCATGGGCCAAAGCTCCCATCTACAGTaGGATTTCTGGTCGGACAGGTGGGGATGCTCTGATCCCACTGGG +
Preference number: 5 (lower is better)
Translates to: YRVSTVTMGQSSHLQ*DFWSDRWGCSDPTG
Trigger: CCCAGTGGGATCAGAGCATCCCCACCTGTCCGACCAGAAATCTCACTGTAGATGGGAGCTTTGGCCCATGGTCACCGTGGACACCCTGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
CDS GCA 90 bp GTTCTGGGTTGTTGCAAACACGCTTCCGGTTCCGAATGCCCCTGCTaGAGTCTCTGCTGCACTGTGACCAGGAAGTCCAGGCTGACCATG +
Preference number: 5 (lower is better)
Translates to: VLGCCKHASGSECPC*SLCCTVTRKSRLTM
Trigger: CATGGTCAGCCTGGACTTCCTGGTCACAGTGCAGCAGAGACTGCAGCAGGGGCATTCGGAACCGGAAGCGTGTTTGCAACAACCCAGAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
CDS GCA 90 bp CAGCTTTCTGGGCAGGTCTGTGTGTTGCAGAGTGCCTCTTCTGTGTaGAGTCCCAGGCAGATGTCCCCTCCATATGCTGGGGCTGGATTC +
Preference number: 5 (lower is better)
Translates to: QLSGQVCVLQSASSV*SPRQMSPPYAGAGF
Trigger: GAATCCAGCCCCAGCATATGGAGGGGACATCTGCCTGGGACTGCACACAGAAGAGGCACTCTGCAACACACAGACCTGCCCAGAAAGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
CDS GCA 90 bp ACCAGTCTGACCACTCTGACCAGCTTTCTGGGCAGGTCTGTGTGTTaGAGAGTGCCTCTTCTGTGTGCAGTCCCAGGCAGATGTCCCCTC +
Preference number: 5 (lower is better)
Translates to: TSLTTLTSFLGRSVC*RVPLLCAVPGRCPL
Trigger: GAGGGGACATCTGCCTGGGACTGCACACAGAAGAGGCACTCTGCAACACACAGACCTGCCCAGAAAGCTGGTCAGAGTGGTCAGACTGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
CDS CCA 90 bp TTGGCCACATGCTCCTGTAGTCCCACAAATAGGACACTCTGGCTGTaGAGGATCTGCAGGCTCCTGATGGGCTCACTCCTCCTCTCTGGG +
Preference number: 5 (lower is better)
Translates to: LATCSCSPTNRTLWL*RICRLLMGSLLLSG
Trigger: CCCAGAGAGGAGGAGTGAGCCCATCAGGAGCCTGCAGATCCTCCACAGCCAGAGTGTCCTATTTGTGGGACTACAGGAGCATGTGGCCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
CDS CCA 90 bp GGGATCTTGGCCACATGCTCCTGTAGTCCCACAAATAGGACACTCTaGCTGTGGAGGATCTGCAGGCTCCTGATGGGCTCACTCCTCCTC +
Preference number: 5 (lower is better)
Translates to: GILATCSCSPTNRTL*LWRICRLLMGSLLL
Trigger: GAGGAGGAGTGAGCCCATCAGGAGCCTGCAGATCCTCCACAGCCAGAGTGTCCTATTTGTGGGACTACAGGAGCATGTGGCCAAGATCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
CDS-3UTR CAA 90 bp AGGTCTGGAGTGTGGCATACACTGCACCAGGGGCCGCAGCTGTACACCTACAGATCCACACTCCCAGGCTaGAGAACAGCCATGCAAGGA +
Preference number: 5 (lower is better)
Translates to: RSGVWHTLHQGPQLYTYRSTLPG*RTAMQG
Trigger: TCCTTGCATGGCTGTTCTCAAGCCTGGGAGTGTGGA...TCTGTAGGTGTACAGCTGCGGCCCCTGGTGCAGTGTATGCCACACTCCAGACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
CDS-3UTR CAA 90 bp AGGTCTGGAGTGTGGCATACACTGCACCAGGGGCCGCAGCTGTACACCTACAGAGCAGGCACTGCGTGTTaGATGGAAGTGGCACCTCTT +
Preference number: 5 (lower is better)
Translates to: RSGVWHTLHQGPQLYTYRAGTAC*MEVAPL
Trigger: AAGAGGTGCCACTTCCATCAAACACGCAGTGCCTGC...TCTGTAGGTGTACAGCTGCGGCCCCTGGTGCAGTGTATGCCACACTCCAGACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
CDS-3UTR CAA 90 bp AGGTCTGGAGTGTGGCATACACTGCACCAGGGGCCGCAGCTGTACACCTACAGAGGCTGGTATTCCACATaGCATCCTGCACAGTCAGGC +
Preference number: 5 (lower is better)
Translates to: RSGVWHTLHQGPQLYTYRGWYST*HPAQSG
Trigger: GCCTGACTGTGCAGGATGCAATGTGGAATACCAGCC...TCTGTAGGTGTACAGCTGCGGCCCCTGGTGCAGTGTATGCCACACTCCAGACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
CDS TCA 90 bp CTCCCATCTACAGTGAGATTTCTGGTCGGACAGGTGGGGATGCTCTaGTCCCACTGGGTCATGCTCAGACTCTCCTCCAGGCTGGTGCAT +
Preference number: 5 (lower is better)
Translates to: LPSTVRFLVGQVGML*SHWVMLRLSSRLVH
Trigger: ATGCACCAGCCTGGAGGAGAGTCTGAGCATGACCCAGTGGGATCAGAGCATCCCCACCTGTCCGACCAGAAATCTCACTGTAGATGGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
CDS GCA 90 bp TCAGCTCCGGGCATGCATTGGTGTTACAAGGCTGGTATTCCACATTaGATCCTGCACAGTCAGGCCCATTTTCACAGGTCCTCCGGCGGG +
Preference number: 5 (lower is better)
Translates to: SAPGMHWCYKAGIPH*ILHSQAHFHRSSGG
Trigger: CCCGCCGGAGGACCTGTGAAAATGGGCCTGACTGTGCAGGATGCAATGTGGAATACCAGCCTTGTAACACCAATGCATGCCCGGAGCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
CDS GCA 90 bp CAAACTTGGGTTCTGGGTTGTTGCAAACACGCTTCCGGTTCCGAATaGCCCTGCTGCAGTCTCTGCTGCACTGTGACCAGGAAGTCCAGG +
Preference number: 5 (lower is better)
Translates to: QTWVLGCCKHASGSE*PCCSLCCTVTRKSR
Trigger: CCTGGACTTCCTGGTCACAGTGCAGCAGAGACTGCAGCAGGGGCATTCGGAACCGGAAGCGTGTTTGCAACAACCCAGAACCCAAGTTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
CDS GCA 90 bp GAGTGCCTCTTCTGTGTGCAGTCCCAGGCAGATGTCCCCTCCATATaGTGGGGCTGGATTCGAACAAGAACGGGTTCTCATGTAGTGGCC +
Preference number: 5 (lower is better)
Translates to: ECLFCVQSQADVPSI*WGWIRTRTGSHVVA
Trigger: GGCCACTACATGAGAACCCGTTCTTGTTCGAATCCAGCCCCAGCATATGGAGGGGACATCTGCCTGGGACTGCACACAGAAGAGGCACTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
CDS GCA 90 bp TATGCTGCTGTTGAGGGCGGCAGGAGAGACAGGGTGGATGACAGTTaGATCATGGGACTGCTGCTGGTACCTCTGGCAGTAGGTGTAGAC +
Preference number: 5 (lower is better)
Translates to: YAAVEGGRRDRVDDS*IMGLLLVPLAVGVD
Trigger: GTCTACACCTACTGCCAGAGGTACCAGCAGCAGTCCCATGATGCAACTGTCATCCACCCTGTCTCTCCTGCCGCCCTCAACAGCAGCATA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
CDS CCA 90 bp TGCCTCTTCTGTGTGCAGTCCCAGGCAGATGTCCCCTCCATATGCTaGGGCTGGATTCGAACAAGAACGGGTTCTCATGTAGTGGCCACC +
Preference number: 5 (lower is better)
Translates to: CLFCVQSQADVPSIC*GWIRTRTGSHVVAT
Trigger: GGTGGCCACTACATGAGAACCCGTTCTTGTTCGAATCCAGCCCCAGCATATGGAGGGGACATCTGCCTGGGACTGCACACAGAAGAGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
CDS GCA 90 bp TGCTCCTGTAGTCCCACAAATAGGACACTCTGGCTGTGGAGGATCTaGAGGCTCCTGATGGGCTCACTCCTCCTCTCTGGGAAAAGCTCA +
Preference number: 5 (lower is better)
Translates to: CSCSPTNRTLWLWRI*RLLMGSLLLSGKSS
Trigger: TGAGCTTTTCCCAGAGAGGAGGAGTGAGCCCATCAGGAGCCTGCAGATCCTCCACAGCCAGAGTGTCCTATTTGTGGGACTACAGGAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
CDS GCA 90 bp GATTTCTGGTCGGACAGGTGGGGATGCTCTGATCCCACTGGGTCATaGTCAGACTCTCCTCCAGGCTGGTGCATTTCTTCATCACCGCAT +
Preference number: 5 (lower is better)
Translates to: DFWSDRWGCSDPTGS*SDSPPGWCISSSPH
Trigger: ATGCGGTGATGAAGAAATGCACCAGCCTGGAGGAGAGTCTGAGCATGACCCAGTGGGATCAGAGCATCCCCACCTGTCCGACCAGAAATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
CDS GCA 90 bp AGGGGTCCAGGGTGTCCAGGGTGTGGTCTTCTTCAGCTCCGGGCATaGATTGGTGTTACAAGGCTGGTATTCCACATTGCATCCTGCACA +
Preference number: 5 (lower is better)
Translates to: RGPGCPGCGLLQLRA*IGVTRLVFHIASCT
Trigger: TGTGCAGGATGCAATGTGGAATACCAGCCTTGTAACACCAATGCATGCCCGGAGCTGAAGAAGACCACACCCTGGACACCCTGGACCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
CDS CCA 90 bp TTCTGTGTGCAGTCCCAGGCAGATGTCCCCTCCATATGCTGGGGCTaGATTCGAACAAGAACGGGTTCTCATGTAGTGGCCACCTCCACA +
Preference number: 5 (lower is better)
Translates to: FCVQSQADVPSICWG*IRTRTGSHVVATST
Trigger: TGTGGAGGTGGCCACTACATGAGAACCCGTTCTTGTTCGAATCCAGCCCCAGCATATGGAGGGGACATCTGCCTGGGACTGCACACAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
CDS CCA 90 bp ACAAGGCCGGCTCTCTGTAGTATTTCCAGAACATTGGCTGCCCACTaGAAACAGAAGGATGCACTGCCGAGCACGGACCTGGGTACCAGA +
Preference number: 5 (lower is better)
Translates to: TRPALCSISRTLAAH*KQKDALPSTDLGTR
Trigger: TCTGGTACCCAGGTCCGTGCTCGGCAGTGCATCCTTCTGTTTCCAGTGGGCAGCCAATGTTCTGGAAATACTACAGAGAGCCGGCCTTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
CDS TCA 90 bp GTCCCACAAATAGGACACTCTGGCTGTGGAGGATCTGCAGGCTCCTaGTGGGCTCACTCCTCCTCTCTGGGAAAAGCTCAATCTCTTCCA +
Preference number: 5 (lower is better)
Translates to: VPQIGHSGCGGSAGS*WAHSSSLGKAQSLP
Trigger: TGGAAGAGATTGAGCTTTTCCCAGAGAGGAGGAGTGAGCCCATCAGGAGCCTGCAGATCCTCCACAGCCAGAGTGTCCTATTTGTGGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
CDS GCA 90 bp CGGGCATGCATTGGTGTTACAAGGCTGGTATTCCACATTGCATCCTaGACAGTCAGGCCCATTTTCACAGGTCCTCCGGCGGGCTTGAAT +
Preference number: 5 (lower is better)
Translates to: RACIGVTRLVFHIAS*TVRPIFTGPPAGLN
Trigger: ATTCAAGCCCGCCGGAGGACCTGTGAAAATGGGCCTGACTGTGCAGGATGCAATGTGGAATACCAGCCTTGTAACACCAATGCATGCCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
CDS GCA 90 bp AAATGTTGCATTCCTGGAACTCCAGCGATGGGCCAAGGCATGGCATaGCCCCAAACTTGGGTTCTGGGTTGTTGCAAACACGCTTCCGGT +
Preference number: 5 (lower is better)
Translates to: KCCIPGTPAMGQGMA*PQTWVLGCCKHASG
Trigger: ACCGGAAGCGTGTTTGCAACAACCCAGAACCCAAGTTTGGGGGCATGCCATGCCTTGGCCCATCGCTGGAGTTCCAGGAATGCAACATTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
CDS CCA 90 bp AGGCACTGCGTGTTTGATGGAAGTGGCACCTCTTCAGGGGGATCTTaGCCACATGCTCCTGTAGTCCCACAAATAGGACACTCTGGCTGT +
Preference number: 5 (lower is better)
Translates to: RHCVFDGSGTSSGGS*PHAPVVPQIGHSGC
Trigger: ACAGCCAGAGTGTCCTATTTGTGGGACTACAGGAGCATGTGGCCAAGATCCCCCTGAAGAGGTGCCACTTCCATCAAACACGCAGTGCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
CDS CCA 90 bp TCCAGGGTGTCCAGGGTGTGGTCTTCTTCAGCTCCGGGCATGCATTaGTGTTACAAGGCTGGTATTCCACATTGCATCCTGCACAGTCAG +
Preference number: 5 (lower is better)
Translates to: SRVSRVWSSSAPGMH*CYKAGIPHCILHSQ
Trigger: CTGACTGTGCAGGATGCAATGTGGAATACCAGCCTTGTAACACCAATGCATGCCCGGAGCTGAAGAAGACCACACCCTGGACACCCTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
CDS-3UTR CAA 90 bp AACAGTGATGACAGTCACTGCCCCAGACCAAAGCAGCGGGTCTCAGTAGACCACTTGGGTTCTGGGTTGTaGCAAACACGCTTCCGGTTC +
Preference number: 5 (lower is better)
Translates to: NSDDSHCPRPKQRVSVDHLGSGL*QTRFRF
Trigger: GAACCGGAAGCGTGTTTGCAACAACCCAGAACCCAA...GTGGTCTACTGAGACCCGCTGCTTTGGTCTGGGGCAGTGACTGTCATCACTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
CDS TCA 90 bp CTCTGCTGCACTGTGACCAGGAAGTCCAGGCTGACCATGCCCCATTaGCTGTATGAGCAGAGTATCTCCCAGCTCTTAGAAAGTCTCCAG +
Preference number: 5 (lower is better)
Translates to: LCCTVTRKSRLTMPH*LYEQSISQLLESLQ
Trigger: CTGGAGACTTTCTAAGAGCTGGGAGATACTCTGCTCATACAGTCAATGGGGCATGGTCAGCCTGGACTTCCTGGTCACAGTGCAGCAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
CDS CCA 90 bp ACTGTGCAGTTCGAAGAGGAGGCAAAGTGCCCAGACTTCGGTAAATaGCTGGATCTCGCCCTGGGAAATCCATGGCTGTTGCAGCATAGA +
Preference number: 5 (lower is better)
Translates to: TVQFEEEAKCPDFGK*LDLALGNPWLLQHR
Trigger: TCTATGCTGCAACAGCCATGGATTTCCCAGGGCGAGATCCAGCCATTTACCGAAGTCTGGGCACTTTGCCTCCTCTTCGAACTGCACAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
CDS CCA 90 bp GAAGAAATCGCCCTCCAATGTCATTTTTACAGACCCGGGCAGCCCTaGAGAACACCGTCTTCCCACAGTCATGTTCCACGGCGTTTTCTC +
Preference number: 5 (lower is better)
Translates to: EEIALQCHFYRPGQP*RTPSSHSHVPRRFL
Trigger: GAGAAAACGCCGTGGAACATGACTGTGGGAAGACGGTGTTCTCCAGGGCTGCCCGGGTCTGTAAAAATGACATTGGAGGGCGATTTCTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
CDS CCA 90 bp CAAGACCACACACCATCCACTGGACAAGGTAAAATGTTGCATTCCTaGAACTCCAGCGATGGGCCAAGGCATGGCATGCCCCCAAACTTG +
Preference number: 5 (lower is better)
Translates to: QDHTPSTGQGKMLHS*NSSDGPRHGMPPNL
Trigger: CAAGTTTGGGGGCATGCCATGCCTTGGCCCATCGCTGGAGTTCCAGGAATGCAACATTTTACCTTGTCCAGTGGATGGTGTGTGGTCTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
CDS CCA 90 bp GAGTCAAATACACAAGGCCGGCTCTCTGTAGTATTTCCAGAACATTaGCTGCCCACTGGAAACAGAAGGATGCACTGCCGAGCACGGACC +
Preference number: 5 (lower is better)
Translates to: ESNTQGRLSVVFPEH*LPTGNRRMHCRART
Trigger: GGTCCGTGCTCGGCAGTGCATCCTTCTGTTTCCAGTGGGCAGCCAATGTTCTGGAAATACTACAGAGAGCCGGCCTTGTGTATTTGACTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
CDS-3UTR CAA 90 bp AAATTTGAGGTAAGGGCCTGGCCAGCTCTCAGGAAGAATATCAATCCAGTGGGTGGATCGCTGCCGCACTaGGAAGCCAATGCCACAGGT +
Preference number: 5 (lower is better)
Translates to: KFEVRAWPALRKNINPVGGSLPH*EANATG
Trigger: ACCTGTGGCATTGGCTTCCAAGTGCGGCAGCGATCC...ACCCACTGGATTGATATTCTTCCTGAGAGCTGGCCAGGCCCTTACCTCAAATTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
CDS-3UTR CAA 90 bp TTCACAATATGTGTCACTGTAAGTAGCCTGCATCTGTTTCCCTCATACCTATGTTGCCTGGGCGTGGGGTaGCTGCAGGATCGCTGCCGC +
Preference number: 5 (lower is better)
Translates to: FTICVTVSSLHLFPSYLCCLGVG*LQDRCR
Trigger: GCGGCAGCGATCCTGCAGCAACCCCACGCCCAGGCA...ACATAGGTATGAGGGAAACAGATGCAGGCTACTTACAGTGACACATATTGTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
CDS TCA 90 bp CACTGTGACCAGGAAGTCCAGGCTGACCATGCCCCATTGACTGTATaGGCAGAGTATCTCCCAGCTCTTAGAAAGTCTCCAGAAAGTCCG +
Preference number: 5 (lower is better)
Translates to: HCDQEVQADHAPLTV*AEYLPALRKSPESP
Trigger: CGGACTTTCTGGAGACTTTCTAAGAGCTGGGAGATACTCTGCTCATACAGTCAATGGGGCATGGTCAGCCTGGACTTCCTGGTCACAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
CDS CCA 90 bp AGTCTCCAGAAAGTCCGTCTGTGGAGCAGCCACTGGTTCCATCGCTaGAACAGTACCGCATTTCTATCCTCTGTCTTCCTACTTCCAGCA +
Preference number: 5 (lower is better)
Translates to: SLQKVRLWSSHWFHR*NSTAFLSSVFLLPA
Trigger: TGCTGGAAGTAGGAAGACAGAGGATAGAAATGCGGTACTGTTCCAGCGATGGAACCAGTGGCTGCTCCACAGACGGACTTTCTGGAGACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
CDS-3UTR CAA 90 bp ATACTCACTAGCCAGCAGCAGTCCCACACAGAACCAAGTGGCTGTTCTTTCAGAACAGGTGTGAAGGCATaGGTCCCACAGGTGAATAGC +
Preference number: 5 (lower is better)
Translates to: ILTSQQQSHTEPSGCSFRTGVKA*VPQVNS
Trigger: GCTATTCACCTGTGGGACCAATGCCTTCACACCTGT...TCTGAAAGAACAGCCACTTGGTTCTGTGTGGGACTGCTGCTGGCTAGTGAGTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
CDS-3UTR CAA 90 bp AAATTTGAGGTAAGGGCCTGGCCAGCTCTCAGGAAGAATATCAATCCAGTGGGTCCATTGTCAGAGATGTaGACAGGGGTCCAGGGTGTC +
Preference number: 5 (lower is better)
Translates to: KFEVRAWPALRKNINPVGPLSEM*TGVQGV
Trigger: GACACCCTGGACCCCTGTCAACATCTCTGACAATGG...ACCCACTGGATTGATATTCTTCCTGAGAGCTGGCCAGGCCCTTACCTCAAATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
CDS-3UTR CAA 90 bp ATACTCACTAGCCAGCAGCAGTCCCACACAGAACCAAGTGGCTGTTCTTTCAGACTACGCTGCTGGATCTaGCCACAGATACTTCTGGGA +
Preference number: 5 (lower is better)
Translates to: ILTSQQQSHTEPSGCSFRLRCWI*PQILLG
Trigger: TCCCAGAAGTATCTGTGGCAAGATCCAGCAGCGTAG...TCTGAAAGAACAGCCACTTGGTTCTGTGTGGGACTGCTGCTGGCTAGTGAGTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
CDS-3UTR CAA 90 bp AAATTTGAGGTAAGGGCCTGGCCAGCTCTCAGGAAGAATATCAATCCAGTGGGTGGAAATCCATGGCTGTaGCAGCATAGAGCTCACCAC +
Preference number: 5 (lower is better)
Translates to: KFEVRAWPALRKNINPVGGNPWL*QHRAHH
Trigger: GTGGTGAGCTCTATGCTGCAACAGCCATGGATTTCC...ACCCACTGGATTGATATTCTTCCTGAGAGCTGGCCAGGCCCTTACCTCAAATTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
CDS-3UTR CAA 90 bp ATACTCACTAGCCAGCAGCAGTCCCACACAGAACCAAGTGGCTGTTCTTTCAGACCATTCCTGGAACAGTaGGTGATCTCCATTCTAGGG +
Preference number: 5 (lower is better)
Translates to: ILTSQQQSHTEPSGCSFRPFLEQ*VISILG
Trigger: CCCTAGAATGGAGATCACCAACTGTTCCAGGAATGG...TCTGAAAGAACAGCCACTTGGTTCTGTGTGGGACTGCTGCTGGCTAGTGAGTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
CDS-3UTR CAA 90 bp AGGGCAAATACTGACAGCCAAACACAGGGGCTTAATAGTGTGGCTTGCCTATTGTTAGTTATGCTGCTGTaGAGGGCGGCAGGAGAGACA +
Preference number: 5 (lower is better)
Translates to: RANTDSQTQGLNSVACLLLVMLL*RAAGET
Trigger: TGTCTCTCCTGCCGCCCTCAACAGCAGCATAACTAA...CAATAGGCAAGCCACACTATTAAGCCCCTGTGTTTGGCTGTCAGTATTTGCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
CDS TCA 90 bp CTGGGTCAAATGTTAACCTCGAGAAATCCACAGCATTCTCGGCTCTaGACTCCCGTAACCAGGGGCCAATTTCTTTGTAAGAGACGACAG +
Preference number: 5 (lower is better)
Translates to: LGQMLTSRNPQHSRL*TPVTRGQFLCKRRQ
Trigger: CTGTCGTCTCTTACAAAGAAATTGGCCCCTGGTTACGGGAGTTCAGAGCCGAGAATGCTGTGGATTTCTCGAGGTTAACATTTGACCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
CDS CCA 90 bp CCGCATTTCTATCCTCTGTCTTCCTACTTCCAGCAAATTTGGATCTaGCAGGCGAGCTTTACAGGTATAGCGGAAACGCTGCTCATAGTG +
Preference number: 5 (lower is better)
Translates to: PHFYPLSSYFQQIWI*QASFTGIAETLLIV
Trigger: CACTATGAGCAGCGTTTCCGCTATACCTGTAAAGCTCGCCTGCCAGATCCAAATTTGCTGGAAGTAGGAAGACAGAGGATAGAAATGCGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
CDS CCA 90 bp ACAGTACCGCATTTCTATCCTCTGTCTTCCTACTTCCAGCAAATTTaGATCTGGCAGGCGAGCTTTACAGGTATAGCGGAAACGCTGCTC +
Preference number: 5 (lower is better)
Translates to: TVPHFYPLSSYFQQI*IWQASFTGIAETLL
Trigger: GAGCAGCGTTTCCGCTATACCTGTAAAGCTCGCCTGCCAGATCCAAATTTGCTGGAAGTAGGAAGACAGAGGATAGAAATGCGGTACTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
CDS-3UTR CAA 90 bp AACAGTGATGACAGTCACTGCCCCAGACCAAAGCAGCGGGTCTCAGTAGACCACACAAAGTTTGGTTCATaGAGCCATTTGGAGTTGTAC +
Preference number: 5 (lower is better)
Translates to: NSDDSHCPRPKQRVSVDHTKFGS*SHLELY
Trigger: GTACAACTCCAAATGGCTCAATGAACCAAACTTTGT...GTGGTCTACTGAGACCCGCTGCTTTGGTCTGGGGCAGTGACTGTCATCACTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
CDS-3UTR CAA 90 bp GTCAACAGGGTCCAGATCAAACACATGGATTGGTCCTTCCTAGGGACAGAGACAGGACAAGGTAAAATGTaGCATTCCTGGAACTCCAGC +
Preference number: 5 (lower is better)
Translates to: VNRVQIKHMDWSFLGTETGQGKM*HSWNSS
Trigger: GCTGGAGTTCCAGGAATGCAACATTTTACCTTGTCC...TGTCTCTGTCCCTAGGAAGGACCAATCCATGTGTTTGATCTGGACCCTGTTGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
CDS GCA 90 bp GGAAGACACAAAGTTTGGTTCATTGAGCCATTTGGAGTTGTACTGTaGAGTTCGAAGAGGAGGCAAAGTGCCCAGACTTCGGTAAATGGC +
Preference number: 5 (lower is better)
Translates to: GRHKVWFIEPFGVVL*SSKRRQSAQTSVNG
Trigger: GCCATTTACCGAAGTCTGGGCACTTTGCCTCCTCTTCGAACTGCACAGTACAACTCCAAATGGCTCAATGAACCAAACTTTGTGTCTTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
CDS-3UTR CAA 90 bp AAATTTGAGGTAAGGGCCTGGCCAGCTCTCAGGAAGAATATCAATCCAGTGGGTGAGTTTTCTTGGTACTaGAAGGGTCCATTGAAGGCC +
Preference number: 5 (lower is better)
Translates to: KFEVRAWPALRKNINPVGEFSWY*KGPLKA
Trigger: GGCCTTCAATGGACCCTTCAAGTACCAAGAAAACTC...ACCCACTGGATTGATATTCTTCCTGAGAGCTGGCCAGGCCCTTACCTCAAATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
CDS-3UTR CAA 90 bp ATACTCACTAGCCAGCAGCAGTCCCACACAGAACCAAGTGGCTGTTCTTTCAGACCAGTGAGATGTGGGTaGAAGTATTTGTTTCTCTCC +
Preference number: 5 (lower is better)
Translates to: ILTSQQQSHTEPSGCSFRPVRCG*KYLFLS
Trigger: GGAGAGAAACAAATACTTCAACCCACATCTCACTGG...TCTGAAAGAACAGCCACTTGGTTCTGTGTGGGACTGCTGCTGGCTAGTGAGTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
CDS-3UTR CAA 90 bp AAATTTGAGGTAAGGGCCTGGCCAGCTCTCAGGAAGAATATCAATCCAGTGGGTTTGAGCCATTTGGAGTaGTACTGTGCAGTTCGAAGA +
Preference number: 5 (lower is better)
Translates to: KFEVRAWPALRKNINPVGLSHLE*YCAVRR
Trigger: TCTTCGAACTGCACAGTACAACTCCAAATGGCTCAA...ACCCACTGGATTGATATTCTTCCTGAGAGCTGGCCAGGCCCTTACCTCAAATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
CDS-3UTR CAA 90 bp TTATTTTCCATCATAAATGTTGAAGAATTTTCTCCTCATGGAGGGAGGGAGGAATGGGAGAAGCGGCTGTaGTCCTCCATGAAAGAGGGC +
Preference number: 5 (lower is better)
Translates to: LFSIINVEEFSPHGGREEWEKRL*SSMKEG
Trigger: GCCCTCTTTCATGGAGGACAACAGCCGCTTCTCCCA...TTCCTCCCTCCCTCCATGAGGAGAAAATTCTTCAACATTTATGATGGAAAATAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
CDS-3UTR CAA 90 bp AAATTTGAGGTAAGGGCCTGGCCAGCTCTCAGGAAGAATATCAATCCAGTGGGTTGTGGGTTGAAGTATTaGTTTCTCTCCTCTAGGATC +
Preference number: 5 (lower is better)
Translates to: KFEVRAWPALRKNINPVGCGLKY*FLSSRI
Trigger: GATCCTAGAGGAGAGAAACAAATACTTCAACCCACA...ACCCACTGGATTGATATTCTTCCTGAGAGCTGGCCAGGCCCTTACCTCAAATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
CDS-3UTR CAA 90 bp CCACACTTGAACATGAGACATTTCTCTCATTTCCTGTTCCTGAGTTCAAAGAGACTACTTCCAGCAAATTaGGATCTGGCAGGCGAGCTT +
Preference number: 5 (lower is better)
Translates to: PHLNMRHFSHFLFLSSKRLLPAN*DLAGEL
Trigger: AAGCTCGCCTGCCAGATCCAAATTTGCTGGAAGTAG...TCTCTTTGAACTCAGGAACAGGAAATGAGAGAAATGTCTCATGTTCAAGTGTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
CDS-3UTR CAA 90 bp CCTCAAGGCCATAGATTAGTATGTATAGATCTTGGAAAATCTCCTTACATCACTAACTTGGGTTCTGGGTaGTTGCAAACACGCTTCCGG +
Preference number: 5 (lower is better)
Translates to: PQGHRLVCIDLGKSPYITNLGSG*LQTRFR
Trigger: CCGGAAGCGTGTTTGCAACAACCCAGAACCCAAGTT...AGTGATGTAAGGAGATTTTCCAAGATCTATACATACTAATCTATGGCCTTGAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
CDS-3UTR CAA 90 bp CCACACTTGAACATGAGACATTTCTCTCATTTCCTGTTCCTGAGTTCAAAGAGAAGTATTTCCAGAACATaGGCTGCCCACTGGAAACAG +
Preference number: 5 (lower is better)
Translates to: PHLNMRHFSHFLFLSSKRSISRT*AAHWKQ
Trigger: CTGTTTCCAGTGGGCAGCCAATGTTCTGGAAATACT...TCTCTTTGAACTCAGGAACAGGAAATGAGAGAAATGTCTCATGTTCAAGTGTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
CDS-3UTR CAA 90 bp CCACACTTGAACATGAGACATTTCTCTCATTTCCTGTTCCTGAGTTCAAAGAGAGGTTCATTGAGCCATTaGGAGTTGTACTGTGCAGTT +
Preference number: 5 (lower is better)
Translates to: PHLNMRHFSHFLFLSSKRGSLSH*ELYCAV
Trigger: AACTGCACAGTACAACTCCAAATGGCTCAATGAACC...TCTCTTTGAACTCAGGAACAGGAAATGAGAGAAATGTCTCATGTTCAAGTGTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
CDS-3UTR CAA 90 bp AAGTGCACTGTTTTGATATCTCCATGGAAACTGATATTTTTGATCCAGGAGACTCAGAGCAAATGTTCATaGCAGTATCTTTCCTCCCTG +
Preference number: 5 (lower is better)
Translates to: KCTVLISPWKLIFLIQETQSKCS*QYLSSL
Trigger: CAGGGAGGAAAGATACTGCAATGAACATTTGCTCTG...AGTCTCCTGGATCAAAAATATCAGTTTCCATGGAGATATCAAAACAGTGCACTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
CDS-3UTR CAA 90 bp TTCACAATATGTGTCACTGTAAGTAGCCTGCATCTGTTTCCCTCATACCTATGTTCCTCTAGGATCAAGTaGTTTTTGTTAAATGCCTTG +
Preference number: 5 (lower is better)
Translates to: FTICVTVSSLHLFPSYLCSSRIK*FLLNAL
Trigger: CAAGGCATTTAACAAAAACAACTTGATCCTAGAGGA...ACATAGGTATGAGGGAAACAGATGCAGGCTACTTACAGTGACACATATTGTGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
CDS-3UTR CAA 90 bp CCTCAAGGCCATAGATTAGTATGTATAGATCTTGGAAAATCTCCTTACATCACTATCATGTGGAACATGTaGAACTCTCCACACCTTTTT +
Preference number: 5 (lower is better)
Translates to: PQGHRLVCIDLGKSPYITIMWNM*NSPHLF
Trigger: AAAAAGGTGTGGAGAGTTCAACATGTTCCACATGAT...AGTGATGTAAGGAGATTTTCCAAGATCTATACATACTAATCTATGGCCTTGAGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
CDS GCA 72 bp CGCACACGCGCCCGCCATGCCTGGGCGTGGGGTTGCTaGAGGATCGCTGCCGCACTTGGAAGCCAATGCCAC +
Preference number: 6 (lower is better)
Translates to: RTRARHAWAWGC*RIAAALGSQCH
Trigger: GTGGCATTGGCTTCCAAGTGCGGCAGCGATCCTGCAGCAACCCCACGCCCAGGCATGGCGGGCGCGTGTGCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
CDS GCA 72 bp CCACGCACACGCGCCCGCCATGCCTGGGCGTGGGGTTaGTGCAGGATCGCTGCCGCACTTGGAAGCCAATGC +
Preference number: 6 (lower is better)
Translates to: PRTRARHAWAWG*CRIAAALGSQC
Trigger: GCATTGGCTTCCAAGTGCGGCAGCGATCCTGCAGCAACCCCACGCCCAGGCATGGCGGGCGCGTGTGCGTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
CDS GCA 72 bp TCCGGCGGGCTTGAATGCCACCCCCGCACTGGGCTGTaGACCGTTCCCAAGGTCCCCAGCCTGTCCAGAACA +
Preference number: 6 (lower is better)
Translates to: SGGLECHPRTGL*TVPKVPSLSRT
Trigger: TGTTCTGGACAGGCTGGGGACCTTGGGAACGGTGCACAGCCCAGTGCGGGGGTGGCATTCAAGCCCGCCGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
CDS TCA 72 bp CAGTCAGGCCCATTTTCACAGGTCCTCCGGCGGGCTTaGATGCCACCCCCGCACTGGGCTGTGCACCGTTCC +
Preference number: 6 (lower is better)
Translates to: QSGPFSQVLRRA*MPPPHWAVHRS
Trigger: GGAACGGTGCACAGCCCAGTGCGGGGGTGGCATTCAAGCCCGCCGGAGGACCTGTGAAAATGGGCCTGACTG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
CDS GCA 72 bp GCTGCCGCACTTGGAAGCCAATGCCACAGGTCGTGCTaGACGGAGACCAGGAGGTCCAGGGAGTCCAGCCTC +
Preference number: 6 (lower is better)
Translates to: AAALGSQCHRSC*TETRRSRESSL
Trigger: GAGGCTGGACTCCCTGGACCTCCTGGTCTCCGTGCAGCACGACCTGTGGCATTGGCTTCCAAGTGCGGCAGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
CDS GCA 72 bp CAGGCCCATTTTCACAGGTCCTCCGGCGGGCTTGAATaGCACCCCCGCACTGGGCTGTGCACCGTTCCCAAG +
Preference number: 6 (lower is better)
Translates to: QAHFHRSSGGLE*HPRTGLCTVPK
Trigger: CTTGGGAACGGTGCACAGCCCAGTGCGGGGGTGGCATTCAAGCCCGCCGGAGGACCTGTGAAAATGGGCCTG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
CDS CAA 90 bp GCATCCTGCACAGTCAGGCCCATTTTCACAGGTCCTCCGGCGGGCTaGAATGCCACCCCCGCACTGGGCTGTGCACCGTTCCCAAGGTCC +
Preference number: 6 (lower is better)
Translates to: ASCTVRPIFTGPPAG*NATPALGCAPFPRS
Trigger: GGACCTTGGGAACGGTGCACAGCCCAGTGCGGGGGTGGCATTCAAGCCCGCCGGAGGACCTGTGAAAATGGGCCTGACTGTGCAGGATGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
CDS GCA 72 bp GGTTGCTGCAGGATCGCTGCCGCACTTGGAAGCCAATaGCACAGGTCGTGCTGCACGGAGACCAGGAGGTCC +
Preference number: 6 (lower is better)
Translates to: GCCRIAAALGSQ*HRSCCTETRRS
Trigger: GGACCTCCTGGTCTCCGTGCAGCACGACCTGTGGCATTGGCTTCCAAGTGCGGCAGCGATCCTGCAGCAACC
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
CDS CCA 72 bp ACAGGGTGCTCAGCTCTCTGGCACTTGGCAGGGTCCTaGGTCTCGGGCCTAGCAAGTCTCCACACTCCCAGG +
Preference number: 6 (lower is better)
Translates to: TGCSALWHLAGS*VSGLASLHTPR
Trigger: CCTGGGAGTGTGGAGACTTGCTAGGCCCGAGACCCAGGACCCTGCCAAGTGCCAGAGAGCTGAGCACCCTGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
CDS CAA 72 bp ACAGTCAGGCCCATTTTCACAGGTCCTCCGGCGGGCTaGAATGCCACCCCCGCACTGGGCTGTGCACCGTTC +
Preference number: 6 (lower is better)
Translates to: TVRPIFTGPPAG*NATPALGCAPF
Trigger: GAACGGTGCACAGCCCAGTGCGGGGGTGGCATTCAAGCCCGCCGGAGGACCTGTGAAAATGGGCCTGACTGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
CDS GCA 72 bp GCTTCCGGTTCCGAATGCCCCTGCTGCAGTCTCTGCTaGACTGTGACCAGGAAGTCCAGGCTGACCATGCCC +
Preference number: 6 (lower is better)
Translates to: ASGSECPCCSLC*TVTRKSRLTMP
Trigger: GGGCATGGTCAGCCTGGACTTCCTGGTCACAGTGCAGCAGAGACTGCAGCAGGGGCATTCGGAACCGGAAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
CDS GCA 72 bp CACGCTTCCGGTTCCGAATGCCCCTGCTGCAGTCTCTaGTGCACTGTGACCAGGAAGTCCAGGCTGACCATG +
Preference number: 6 (lower is better)
Translates to: HASGSECPCCSL*CTVTRKSRLTM
Trigger: CATGGTCAGCCTGGACTTCCTGGTCACAGTGCAGCAGAGACTGCAGCAGGGGCATTCGGAACCGGAAGCGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
CDS GCA 72 bp GGCATGGCATGCCCCCAAACTTGGGTTCTGGGTTGTTaGAAACACGCTTCCGGTTCCGAATGCCCCTGCTGC +
Preference number: 6 (lower is better)
Translates to: GMACPQTWVLGC*KHASGSECPCC
Trigger: GCAGCAGGGGCATTCGGAACCGGAAGCGTGTTTGCAACAACCCAGAACCCAAGTTTGGGGGCATGCCATGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
CDS CCA 72 bp CCAGCGATGGGCCAAGGCATGGCATGCCCCCAAACTTaGGTTCTGGGTTGTTGCAAACACGCTTCCGGTTCC +
Preference number: 6 (lower is better)
Translates to: PAMGQGMACPQT*VLGCCKHASGS
Trigger: GGAACCGGAAGCGTGTTTGCAACAACCCAGAACCCAAGTTTGGGGGCATGCCATGCCTTGGCCCATCGCTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
CDS CAA 90 bp GATGGGCCAAGGCATGGCATGCCCCCAAACTTGGGTTCTGGGTTGTaGCAAACACGCTTCCGGTTCCGAATGCCCCTGCTGCAGTCTCTG +
Preference number: 6 (lower is better)
Translates to: DGPRHGMPPNLGSGL*QTRFRFRMPLLQSL
Trigger: CAGAGACTGCAGCAGGGGCATTCGGAACCGGAAGCGTGTTTGCAACAACCCAGAACCCAAGTTTGGGGGCATGCCATGCCTTGGCCCATC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
CDS CAA 90 bp AGCGATGGGCCAAGGCATGGCATGCCCCCAAACTTGGGTTCTGGGTaGTTGCAAACACGCTTCCGGTTCCGAATGCCCCTGCTGCAGTCT +
Preference number: 6 (lower is better)
Translates to: SDGPRHGMPPNLGSG*LQTRFRFRMPLLQS
Trigger: AGACTGCAGCAGGGGCATTCGGAACCGGAAGCGTGTTTGCAACAACCCAGAACCCAAGTTTGGGGGCATGCCATGCCTTGGCCCATCGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
CDS CAA 90 bp TCCTGGAACTCCAGCGATGGGCCAAGGCATGGCATGCCCCCAAACTaGGGTTCTGGGTTGTTGCAAACACGCTTCCGGTTCCGAATGCCC +
Preference number: 6 (lower is better)
Translates to: SWNSSDGPRHGMPPN*GSGLLQTRFRFRMP
Trigger: GGGCATTCGGAACCGGAAGCGTGTTTGCAACAACCCAGAACCCAAGTTTGGGGGCATGCCATGCCTTGGCCCATCGCTGGAGTTCCAGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
CDS GCA 72 bp GGTTGTTGCAAACACGCTTCCGGTTCCGAATGCCCCTaGTGCAGTCTCTGCTGCACTGTGACCAGGAAGTCC +
Preference number: 6 (lower is better)
Translates to: GCCKHASGSECP*CSLCCTVTRKS
Trigger: GGACTTCCTGGTCACAGTGCAGCAGAGACTGCAGCAGGGGCATTCGGAACCGGAAGCGTGTTTGCAACAACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
CDS GCA 72 bp GTTCTGGGTTGTTGCAAACACGCTTCCGGTTCCGAATaGCCCTGCTGCAGTCTCTGCTGCACTGTGACCAGG +
Preference number: 6 (lower is better)
Translates to: VLGCCKHASGSE*PCCSLCCTVTR
Trigger: CCTGGTCACAGTGCAGCAGAGACTGCAGCAGGGGCATTCGGAACCGGAAGCGTGTTTGCAACAACCCAGAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
CDS CCA 72 bp TGGGCCAAGGCATGGCATGCCCCCAAACTTGGGTTCTaGGTTGTTGCAAACACGCTTCCGGTTCCGAATGCC +
Preference number: 6 (lower is better)
Translates to: WAKAWHAPKLGF*VVANTLPVPNA
Trigger: GGCATTCGGAACCGGAAGCGTGTTTGCAACAACCCAGAACCCAAGTTTGGGGGCATGCCATGCCTTGGCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
CDS CAA 72 bp GTAAGGGTCCTGAGCGCCAATGCAGGCACTGCGTGTTaGATGGAAGTGGCACCTCTTCAGGGGGATCTTGGC +
Preference number: 6 (lower is better)
Translates to: VRVLSANAGTAC*MEVAPLQGDLG
Trigger: GCCAAGATCCCCCTGAAGAGGTGCCACTTCCATCAAACACGCAGTGCCTGCATTGGCGCTCAGGACCCTTAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
CDS CAA 72 bp AGGCATGGCATGCCCCCAAACTTGGGTTCTGGGTTGTaGCAAACACGCTTCCGGTTCCGAATGCCCCTGCTG +
Preference number: 6 (lower is better)
Translates to: RHGMPPNLGSGL*QTRFRFRMPLL
Trigger: CAGCAGGGGCATTCGGAACCGGAAGCGTGTTTGCAACAACCCAGAACCCAAGTTTGGGGGCATGCCATGCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
CDS CAA 72 bp CCAAGGCATGGCATGCCCCCAAACTTGGGTTCTGGGTaGTTGCAAACACGCTTCCGGTTCCGAATGCCCCTG +
Preference number: 6 (lower is better)
Translates to: PRHGMPPNLGSG*LQTRFRFRMPL
Trigger: CAGGGGCATTCGGAACCGGAAGCGTGTTTGCAACAACCCAGAACCCAAGTTTGGGGGCATGCCATGCCTTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
CDS TCA 72 bp ACAGTGAGATTTCTGGTCGGACAGGTGGGGATGCTCTaGTCCCACTGGGTCATGCTCAGACTCTCCTCCAGG +
Preference number: 6 (lower is better)
Translates to: TVRFLVGQVGML*SHWVMLRLSSR
Trigger: CCTGGAGGAGAGTCTGAGCATGACCCAGTGGGATCAGAGCATCCCCACCTGTCCGACCAGAAATCTCACTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
CDS CCA 72 bp GCCCTCCAATGTCATTTTTACAGACCCGGGCAGCCCTaGAGAACACCGTCTTCCCACAGTCATGTTCCACGG +
Preference number: 6 (lower is better)
Translates to: ALQCHFYRPGQP*RTPSSHSHVPR
Trigger: CCGTGGAACATGACTGTGGGAAGACGGTGTTCTCCAGGGCTGCCCGGGTCTGTAAAAATGACATTGGAGGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
CDS CCA 72 bp GATCCCACTGGGTCATGCTCAGACTCTCCTCCAGGCTaGTGCATTTCTTCATCACCGCATCCCAGCCACAGT +
Preference number: 6 (lower is better)
Translates to: DPTGSCSDSPPG*CISSSPHPSHS
Trigger: ACTGTGGCTGGGATGCGGTGATGAAGAAATGCACCAGCCTGGAGGAGAGTCTGAGCATGACCCAGTGGGATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
CDS CCA 72 bp GTTGCATTCCTGGAACTCCAGCGATGGGCCAAGGCATaGCATGCCCCCAAACTTGGGTTCTGGGTTGTTGCA +
Preference number: 6 (lower is better)
Translates to: VAFLELQRWAKA*HAPKLGFWVVA
Trigger: TGCAACAACCCAGAACCCAAGTTTGGGGGCATGCCATGCCTTGGCCCATCGCTGGAGTTCCAGGAATGCAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
CDS CCA 72 bp CAGTCCCAGGCAGATGTCCCCTCCATATGCTGGGGCTaGATTCGAACAAGAACGGGTTCTCATGTAGTGGCC +
Preference number: 6 (lower is better)
Translates to: QSQADVPSICWG*IRTRTGSHVVA
Trigger: GGCCACTACATGAGAACCCGTTCTTGTTCGAATCCAGCCCCAGCATATGGAGGGGACATCTGCCTGGGACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
CDS CCA 72 bp ACTGGAAACAGAAGGATGCACTGCCGAGCACGGACCTaGGTACCAGATGCATCGCACACAGACCAGTCTGAC +
Preference number: 6 (lower is better)
Translates to: TGNRRMHCRART*VPDASHTDQSD
Trigger: GTCAGACTGGTCTGTGTGCGATGCATCTGGTACCCAGGTCCGTGCTCGGCAGTGCATCCTTCTGTTTCCAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
CDS CAA 90 bp TTCAGCTCCGGGCATGCATTGGTGTTACAAGGCTGGTATTCCACATaGCATCCTGCACAGTCAGGCCCATTTTCACAGGTCCTCCGGCGG +
Preference number: 6 (lower is better)
Translates to: FSSGHALVLQGWYST*HPAQSGPFSQVLRR
Trigger: CCGCCGGAGGACCTGTGAAAATGGGCCTGACTGTGCAGGATGCAATGTGGAATACCAGCCTTGTAACACCAATGCATGCCCGGAGCTGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
CDS GCA 72 bp TGGAAGTGGCACCTCTTCAGGGGGATCTTGGCCACATaGTCCTGTAGTCCCACAAATAGGACACTCTGGCTG +
Preference number: 6 (lower is better)
Translates to: WKWHLFRGILAT*SCSPTNRTLWL
Trigger: CAGCCAGAGTGTCCTATTTGTGGGACTACAGGAGCATGTGGCCAAGATCCCCCTGAAGAGGTGCCACTTCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
CDS GCA 72 bp ATTCCTGGAACTCCAGCGATGGGCCAAGGCATGGCATaGCCCCAAACTTGGGTTCTGGGTTGTTGCAAACAC +
Preference number: 6 (lower is better)
Translates to: IPGTPAMGQGMA*PQTWVLGCCKH
Trigger: GTGTTTGCAACAACCCAGAACCCAAGTTTGGGGGCATGCCATGCCTTGGCCCATCGCTGGAGTTCCAGGAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
CDS CCA 72 bp AAGAGGAGGCAAAGTGCCCAGACTTCGGTAAATGGCTaGATCTCGCCCTGGGAAATCCATGGCTGTTGCAGC +
Preference number: 6 (lower is better)
Translates to: KRRQSAQTSVNG*ISPWEIHGCCS
Trigger: GCTGCAACAGCCATGGATTTCCCAGGGCGAGATCCAGCCATTTACCGAAGTCTGGGCACTTTGCCTCCTCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
CDS CAA 72 bp CTTAACGAGCGGATGGTACAGACAGGTGTGAAGGCATaGGTCCCACAGGTGAATAGCCGGTCCCCACCAACT +
Preference number: 6 (lower is better)
Translates to: LNERMVQTGVKA*VPQVNSRSPPT
Trigger: AGTTGGTGGGGACCGGCTATTCACCTGTGGGACCAATGCCTTCACACCTGTCTGTACCATCCGCTCGTTAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
CDS CAA 90 bp GTCCAGGGTGTCCAGGGTGTGGTCTTCTTCAGCTCCGGGCATGCATaGGTGTTACAAGGCTGGTATTCCACATTGCATCCTGCACAGTCA +
Preference number: 6 (lower is better)
Translates to: VQGVQGVVFFSSGHA*VLQGWYSTLHPAQS
Trigger: TGACTGTGCAGGATGCAATGTGGAATACCAGCCTTGTAACACCAATGCATGCCCGGAGCTGAAGAAGACCACACCCTGGACACCCTGGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
CDS GCA 72 bp TGGAGTTGTACTGTGCAGTTCGAAGAGGAGGCAAAGTaGCCAGACTTCGGTAAATGGCTGGATCTCGCCCTG +
Preference number: 6 (lower is better)
Translates to: WSCTVQFEEEAK*PDFGKWLDLAL
Trigger: CAGGGCGAGATCCAGCCATTTACCGAAGTCTGGGCACTTTGCCTCCTCTTCGAACTGCACAGTACAACTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
CDS GCA 72 bp GGGTGTCCAGGGTGTGGTCTTCTTCAGCTCCGGGCATaGATTGGTGTTACAAGGCTGGTATTCCACATTGCA +
Preference number: 6 (lower is better)
Translates to: GCPGCGLLQLRA*IGVTRLVFHIA
Trigger: TGCAATGTGGAATACCAGCCTTGTAACACCAATGCATGCCCGGAGCTGAAGAAGACCACACCCTGGACACCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
CDS GCA 72 bp TTCTGTGTGCAGTCCCAGGCAGATGTCCCCTCCATATaGTGGGGCTGGATTCGAACAAGAACGGGTTCTCAT +
Preference number: 6 (lower is better)
Translates to: FCVQSQADVPSI*WGWIRTRTGSH
Trigger: ATGAGAACCCGTTCTTGTTCGAATCCAGCCCCAGCATATGGAGGGGACATCTGCCTGGGACTGCACACAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
CDS CCA 72 bp TTCGAAGAGGAGGCAAAGTGCCCAGACTTCGGTAAATaGCTGGATCTCGCCCTGGGAAATCCATGGCTGTTG +
Preference number: 6 (lower is better)
Translates to: FEEEAKCPDFGK*LDLALGNPWLL
Trigger: CAACAGCCATGGATTTCCCAGGGCGAGATCCAGCCATTTACCGAAGTCTGGGCACTTTGCCTCCTCTTCGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
CDS CCA 72 bp TGTGTGCAGTCCCAGGCAGATGTCCCCTCCATATGCTaGGGCTGGATTCGAACAAGAACGGGTTCTCATGTA +
Preference number: 6 (lower is better)
Translates to: CVQSQADVPSIC*GWIRTRTGSHV
Trigger: TACATGAGAACCCGTTCTTGTTCGAATCCAGCCCCAGCATATGGAGGGGACATCTGCCTGGGACTGCACACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
CDS CAA 72 bp GTCCAGAACACGTGTGGTGGGCAGAGCAAATGTTCATaGCAGTATCTTTCCTCCCTGTTCTGGCCCACGCAC +
Preference number: 6 (lower is better)
Translates to: VQNTCGGQSKCS*QYLSSLFWPTH
Trigger: GTGCGTGGGCCAGAACAGGGAGGAAAGATACTGCAATGAACATTTGCTCTGCCCACCACACGTGTTCTGGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
CDS CAA 90 bp GTCAGGTTACTTAACGAGCGGATGGTACAGACAGGTGTGAAGGCATaGGTCCCACAGGTGAATAGCCGGTCCCCACCAACTAAGAGCACT +
Preference number: 6 (lower is better)
Translates to: VRLLNERMVQTGVKA*VPQVNSRSPPTKST
Trigger: AGTGCTCTTAGTTGGTGGGGACCGGCTATTCACCTGTGGGACCAATGCCTTCACACCTGTCTGTACCATCCGCTCGTTAAGTAACCTGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
CDS GCA 72 bp TCCAGAACACGTGTGGTGGGCAGAGCAAATGTTCATTaGAGTATCTTTCCTCCCTGTTCTGGCCCACGCACA +
Preference number: 6 (lower is better)
Translates to: SRTRVVGRANVH*SIFPPCSGPRT
Trigger: TGTGCGTGGGCCAGAACAGGGAGGAAAGATACTGCAATGAACATTTGCTCTGCCCACCACACGTGTTCTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
CDS GCA 72 bp ATTGGTGTTACAAGGCTGGTATTCCACATTGCATCCTaGACAGTCAGGCCCATTTTCACAGGTCCTCCGGCG +
Preference number: 6 (lower is better)
Translates to: IGVTRLVFHIAS*TVRPIFTGPPA
Trigger: CGCCGGAGGACCTGTGAAAATGGGCCTGACTGTGCAGGATGCAATGTGGAATACCAGCCTTGTAACACCAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
CDS CCA 72 bp GTGTTTGATGGAAGTGGCACCTCTTCAGGGGGATCTTaGCCACATGCTCCTGTAGTCCCACAAATAGGACAC +
Preference number: 6 (lower is better)
Translates to: VFDGSGTSSGGS*PHAPVVPQIGH
Trigger: GTGTCCTATTTGTGGGACTACAGGAGCATGTGGCCAAGATCCCCCTGAAGAGGTGCCACTTCCATCAAACAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
CDS CCA 72 bp TCCAGGGTGTGGTCTTCTTCAGCTCCGGGCATGCATTaGTGTTACAAGGCTGGTATTCCACATTGCATCCTG +
Preference number: 6 (lower is better)
Translates to: SRVWSSSAPGMH*CYKAGIPHCIL
Trigger: CAGGATGCAATGTGGAATACCAGCCTTGTAACACCAATGCATGCCCGGAGCTGAAGAAGACCACACCCTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
CDS CCA 72 bp ACACAAGGCCGGCTCTCTGTAGTATTTCCAGAACATTaGCTGCCCACTGGAAACAGAAGGATGCACTGCCGA +
Preference number: 6 (lower is better)
Translates to: TQGRLSVVFPEH*LPTGNRRMHCR
Trigger: TCGGCAGTGCATCCTTCTGTTTCCAGTGGGCAGCCAATGTTCTGGAAATACTACAGAGAGCCGGCCTTGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
CDS CAA 72 bp GTCCAGGGTGTGGTCTTCTTCAGCTCCGGGCATGCATaGGTGTTACAAGGCTGGTATTCCACATTGCATCCT +
Preference number: 6 (lower is better)
Translates to: VQGVVFFSSGHA*VLQGWYSTLHP
Trigger: AGGATGCAATGTGGAATACCAGCCTTGTAACACCAATGCATGCCCGGAGCTGAAGAAGACCACACCCTGGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
CDS TCA 72 bp AGACAGCAGAGGCAGCGATGCTGTTTACATTGGTGGTaGAGATACCATAGATCAGATCCAGCTCCGGCAGGA +
Preference number: 6 (lower is better)
Translates to: RQQRQRCCLHWW*RYHRSDPAPAG
Trigger: TCCTGCCGGAGCTGGATCTGATCTATGGTATCTTCACCACCAATGTAAACAGCATCGCTGCCTCTGCTGTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
CDS TCA 72 bp CAGGAAGTCCAGGCTGACCATGCCCCATTGACTGTATaGGCAGAGTATCTCCCAGCTCTTAGAAAGTCTCCA +
Preference number: 6 (lower is better)
Translates to: QEVQADHAPLTV*AEYLPALRKSP
Trigger: TGGAGACTTTCTAAGAGCTGGGAGATACTCTGCTCATACAGTCAATGGGGCATGGTCAGCCTGGACTTCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
CDS TCA 72 bp ACTGTGACCAGGAAGTCCAGGCTGACCATGCCCCATTaGCTGTATGAGCAGAGTATCTCCCAGCTCTTAGAA +
Preference number: 6 (lower is better)
Translates to: TVTRKSRLTMPH*LYEQSISQLLE
Trigger: TTCTAAGAGCTGGGAGATACTCTGCTCATACAGTCAATGGGGCATGGTCAGCCTGGACTTCCTGGTCACAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
CDS GCA 72 bp TCTCTGGGAAAAGCTCAATCTCTTCCAGCAAACAGCTaGCTGAGCTCTGACTCAGGGGAGCTCGTACTTTCT +
Preference number: 6 (lower is better)
Translates to: SLGKAQSLPANS*LSSDSGELVLS
Trigger: AGAAAGTACGAGCTCCCCTGAGTCAGAGCTCAGGCAGCTGTTTGCTGGAAGAGATTGAGCTTTTCCCAGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
CDS GCA 72 bp GGCATGCATTGGTGTTACAAGGCTGGTATTCCACATTaGATCCTGCACAGTCAGGCCCATTTTCACAGGTCC +
Preference number: 6 (lower is better)
Translates to: GMHWCYKAGIPH*ILHSQAHFHRS
Trigger: GGACCTGTGAAAATGGGCCTGACTGTGCAGGATGCAATGTGGAATACCAGCCTTGTAACACCAATGCATGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
CDS CCA 72 bp AAAGTCCGTCTGTGGAGCAGCCACTGGTTCCATCGCTaGAACAGTACCGCATTTCTATCCTCTGTCTTCCTA +
Preference number: 6 (lower is better)
Translates to: KVRLWSSHWFHR*NSTAFLSSVFL
Trigger: TAGGAAGACAGAGGATAGAAATGCGGTACTGTTCCAGCGATGGAACCAGTGGCTGCTCCACAGACGGACTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
CDS CAA 72 bp GGGCATGCATTGGTGTTACAAGGCTGGTATTCCACATaGCATCCTGCACAGTCAGGCCCATTTTCACAGGTC +
Preference number: 6 (lower is better)
Translates to: GHALVLQGWYST*HPAQSGPFSQV
Trigger: GACCTGTGAAAATGGGCCTGACTGTGCAGGATGCAATGTGGAATACCAGCCTTGTAACACCAATGCATGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
CDS CAA 72 bp CAAGACCACACACCATCCACTGGACAAGGTAAAATGTaGCATTCCTGGAACTCCAGCGATGGGCCAAGGCAT +
Preference number: 6 (lower is better)
Translates to: QDHTPSTGQGKM*HSWNSSDGPRH
Trigger: ATGCCTTGGCCCATCGCTGGAGTTCCAGGAATGCAACATTTTACCTTGTCCAGTGGATGGTGTGTGGTCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
CDS GCA 72 bp GTATGTAGTTCTGACATTCCTCCTTCGATTTGCCCTTaGTGTAACAGGCCTTCTTGGTGGCTTCGTCACACT +
Preference number: 6 (lower is better)
Translates to: VCSSDIPPSICP*CNRPSWWLRHT
Trigger: AGTGTGACGAAGCCACCAAGAAGGCCTGTTACAGCAAGGGCAAATCGAAGGAGGAATGTCAGAACTACATAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
CDS CCA 72 bp TATCCTCTGTCTTCCTACTTCCAGCAAATTTGGATCTaGCAGGCGAGCTTTACAGGTATAGCGGAAACGCTG +
Preference number: 6 (lower is better)
Translates to: YPLSSYFQQIWI*QASFTGIAETL
Trigger: CAGCGTTTCCGCTATACCTGTAAAGCTCGCCTGCCAGATCCAAATTTGCTGGAAGTAGGAAGACAGAGGATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
CDS CAA 90 bp AACAGTACCGCATTTCTATCCTCTGTCTTCCTACTTCCAGCAAATTaGGATCTGGCAGGCGAGCTTTACAGGTATAGCGGAAACGCTGCT +
Preference number: 6 (lower is better)
Translates to: NSTAFLSSVFLLPAN*DLAGELYRYSGNAA
Trigger: AGCAGCGTTTCCGCTATACCTGTAAAGCTCGCCTGCCAGATCCAAATTTGCTGGAAGTAGGAAGACAGAGGATAGAAATGCGGTACTGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
CDS TCA 72 bp ATGTTAACCTCGAGAAATCCACAGCATTCTCGGCTCTaGACTCCCGTAACCAGGGGCCAATTTCTTTGTAAG +
Preference number: 6 (lower is better)
Translates to: MLTSRNPQHSRL*TPVTRGQFLCK
Trigger: CTTACAAAGAAATTGGCCCCTGGTTACGGGAGTTCAGAGCCGAGAATGCTGTGGATTTCTCGAGGTTAACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
CDS CAA 72 bp GAAGACACAAAGTTTGGTTCATTGAGCCATTTGGAGTaGTACTGTGCAGTTCGAAGAGGAGGCAAAGTGCCC +
Preference number: 6 (lower is better)
Translates to: EDTKFGSLSHLE*YCAVRRGGKVP
Trigger: GGGCACTTTGCCTCCTCTTCGAACTGCACAGTACAACTCCAAATGGCTCAATGAACCAAACTTTGTGTCTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
CDS CAA 72 bp GCATTTCTATCCTCTGTCTTCCTACTTCCAGCAAATTaGGATCTGGCAGGCGAGCTTTACAGGTATAGCGGA +
Preference number: 6 (lower is better)
Translates to: AFLSSVFLLPAN*DLAGELYRYSG
Trigger: TCCGCTATACCTGTAAAGCTCGCCTGCCAGATCCAAATTTGCTGGAAGTAGGAAGACAGAGGATAGAAATGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7
CDS CAA 72 bp AAGTATTTGTTTCTCTCCTCTAGGATCAAGTTGTTTTaGTTAAATGCCTTGATGGCCTCCACAGAATCATAT +
Preference number: 6 (lower is better)
Translates to: KYLFLSSRIKLF*LNALMASTESY
Trigger: ATATGATTCTGTGGAGGCCATCAAGGCATTTAACAAAAACAACTTGATCCTAGAGGAGAGAAACAAATACTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067458.7