Pregenerated sensors for SEMA4F (Mus musculus)
Ensembl gene IDs: ENSMUSG00000000627Ensembl transcript IDs: ENSMUST00000000641.15, ENSMUST00000203271.2
Found 187 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CCTGGACACAGCAGGTCAGCCTTTAGAAACGTCGTCCATCTCTGCTaGAGGGTCTTCCGGCCCCCAAGGTCCCCCGCACACACACGGGCC | + |
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Preference number: 1 (lower is better) Translates to: PGHSRSAFRNVVHLC*RVFRPPRSPAHTRA Trigger: GGCCCGTGTGTGTGCGGGGGACCTTGGGGGCCGGAAGACCCTTCAGCAGAGATGGACGACGTTTCTAAAGGCTGACCTGCTGTGTCCAGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000203271.2 |
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| 3UTR CCA 90 bp | GAAAGGGCTGCATCCTCACCGGGGTTCGAGGTCCCTCACCAGGGATaGACGAGGCACATTCACAGGCCAAGAGCAGGACGGAGCAGATGC | + |
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Preference number: 1 (lower is better) Translates to: ERAASSPGFEVPHQG*TRHIHRPRAGRSRC Trigger: GCATCTGCTCCGTCCTGCTCTTGGCCTGTGAATGTGCCTCGTCCATCCCTGGTGAGGGACCTCGAACCCCGGTGAGGATGCAGCCCTTTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000641.15 |
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| 3UTR GCA 90 bp | CAGTGTGTCCAGGGACTGGCCTCAGGCAGCAGGCCAGGGAGGAACTaGCTCACAGCAACACCTCCTCCATTTATGTGGCCCAAGTGTGGT | + |
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Preference number: 1 (lower is better) Translates to: QCVQGLASGSRPGRN*LTATPPPFMWPKCG Trigger: ACCACACTTGGGCCACATAAATGGAGGAGGTGTTGCTGTGAGGCAGTTCCTCCCTGGCCTGCTGCCTGAGGCCAGTCCCTGGACACACTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000641.15 |
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| 3UTR CCA 90 bp | GACGGGGCCACGTGTCCTGCTGCCCTTCCCACCAGAAGGTCACTTTaGGAACTTTGCTCAAAGTTGAAGAAGCGCTGTGGGGTGATGGGG | + |
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Preference number: 1 (lower is better) Translates to: DGATCPAALPTRRSL*ELCSKLKKRCGVMG Trigger: CCCCATCACCCCACAGCGCTTCTTCAACTTTGAGCAAAGTTCCCAAAGTGACCTTCTGGTGGGAAGGGCAGCAGGACACGTGGCCCCGTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000641.15 |
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| 3UTR CCA 90 bp | TTCAAGCACGTGCAGAGCCTAGCTTCACTAGCTTCCGAGGAGGACTaGAGAGAGGTGGGATCTCCAGCAGCAGTGTGTCCAGGGACTGGC | + |
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Preference number: 1 (lower is better) Translates to: FKHVQSLASLASEED*REVGSPAAVCPGTG Trigger: GCCAGTCCCTGGACACACTGCTGCTGGAGATCCCACCTCTCTCCAGTCCTCCTCGGAAGCTAGTGAAGCTAGGCTCTGCACGTGCTTGAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000641.15 |
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| 3UTR GCA 90 bp | GGATGGACGAGGCACATTCACAGGCCAAGAGCAGGACGGAGCAGATaGAGCGCACACAGGAATAACGAAGCAAGAAAGGAGGCGATGGTG | + |
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Preference number: 1 (lower is better) Translates to: GWTRHIHRPRAGRSR*SAHRNNEARKEAMV Trigger: CACCATCGCCTCCTTTCTTGCTTCGTTATTCCTGTGTGCGCTGCATCTGCTCCGTCCTGCTCTTGGCCTGTGAATGTGCCTCGTCCATCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000641.15 |
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| 3UTR TCA 90 bp | CCCCGCACACACACGGGCCACTCGTGGGACCTTGATGCGCTCATATaGGTCCAAGACTCGGGAGGTCTCCGTGAAGAAAAAGAAGATTTC | + |
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Preference number: 1 (lower is better) Translates to: PRTHTGHSWDLDALI*VQDSGGLREEKEDF Trigger: GAAATCTTCTTTTTCTTCACGGAGACCTCCCGAGTCTTGGACTCATATGAGCGCATCAAGGTCCCACGAGTGGCCCGTGTGTGTGCGGGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000203271.2 |
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| 3UTR GCA 90 bp | ACGTGTCCTGCTGCCCTTCCCACCAGAAGGTCACTTTGGGAACTTTaGTCAAAGTTGAAGAAGCGCTGTGGGGTGATGGGGTCGTGTGGT | + |
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Preference number: 1 (lower is better) Translates to: TCPAALPTRRSLWEL*SKLKKRCGVMGSCG Trigger: ACCACACGACCCCATCACCCCACAGCGCTTCTTCAACTTTGAGCAAAGTTCCCAAAGTGACCTTCTGGTGGGAAGGGCAGCAGGACACGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000641.15 |
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| 3UTR GCA 90 bp | TCCTTCGAGGCTTTTCCCCAGAGAAGGGCAGGGTTAAAGCGAAGATaGTGTCCCGTGCACCGACGTAAAGTGTGTGAGAAGCAGGATCCA | + |
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Preference number: 1 (lower is better) Translates to: SFEAFPQRRAGLKRR*CPVHRRKVCEKQDP Trigger: TGGATCCTGCTTCTCACACACTTTACGTCGGTGCACGGGACAGCATCTTCGCTTTAACCCTGCCCTTCTCTGGGGAAAAGCCTCGAAGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000203271.2 |
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| 3UTR CCA 90 bp | CAGAAGGTCACTTTGGGAACTTTGCTCAAAGTTGAAGAAGCGCTGTaGGGTGATGGGGTCGTGTGGTTTCCCTCACTGGCTACCGAGGGT | + |
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Preference number: 1 (lower is better) Translates to: QKVTLGTLLKVEEAL*GDGVVWFPSLATEG Trigger: ACCCTCGGTAGCCAGTGAGGGAAACCACACGACCCCATCACCCCACAGCGCTTCTTCAACTTTGAGCAAAGTTCCCAAAGTGACCTTCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000641.15 |
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| 3UTR GCA 90 bp | ACACACACACACACACACACACACACACACGCACGCACGCACACATaGCACACATGGACAGACATTTCTTTGCATACAATTTCAGGGAGT | + |
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Preference number: 1 (lower is better) Translates to: THTHTHTHTHARTHT*HTWTDISLHTISGS Trigger: ACTCCCTGAAATTGTATGCAAAGAAATGTCTGTCCATGTGTGGCATGTGTGCGTGCGTGCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000641.15 |
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| 3UTR TCA 90 bp | AGTGTGGTGACTATGGACCATGGTCCTTTAACCTCATTAAGGCCTTaGGAATCTGATGAAAGCCATCACACACACACACACACACACACA | + |
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Preference number: 1 (lower is better) Translates to: SVVTMDHGPLTSLRP*ESDESHHTHTHTHT Trigger: TGTGTGTGTGTGTGTGTGTGTGTGATGGCTTTCATCAGATTCTCAAGGCCTTAATGAGGTTAAAGGACCATGGTCCATAGTCACCACACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000641.15 |
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| 3UTR GCA 90 bp | ACATTTCTTTGCATACAATTTCAGGGAGTCCTGCTAGGGGACTCCTaGTTTAGGGCAAGGGTGAAAGTCACTGAGGCAAATCTTCTTGAA | + |
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Preference number: 1 (lower is better) Translates to: TFLCIQFQGVLLGDS*FRARVKVTEANLLE Trigger: TTCAAGAAGATTTGCCTCAGTGACTTTCACCCTTGCCCTAAAGCAGGAGTCCCCTAGCAGGACTCCCTGAAATTGTATGCAAAGAAATGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000641.15 |
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| 3UTR-3UTR CCA 90 bp | CCAGGGATGGACGAGGCACATTCACAGGCCAAGAGCAGGACGGAGCAGATGCAGGCGGTGGCACGGCAGTaGTGGCAGCCAGAGGAGAAA | + |
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Preference number: 2 (lower is better) Translates to: PGMDEAHSQAKSRTEQMQAVARQ*WQPEEK Trigger: TTTCTCCTCTGGCTGCCACCACTGCCGTGCCACCGC...CTGCATCTGCTCCGTCCTGCTCTTGGCCTGTGAATGTGCCTCGTCCATCCCTGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000641.15 |
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| 3UTR-3UTR CCA 90 bp | CCTAGCTTCACTAGCTTCCGAGGAGGACTGGAGAGAGGTGGGATCTCCAGCAGCAGTGTGTCCAGGGACTaGCCTCAGGCAGCAGGCCAG | + |
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Preference number: 2 (lower is better) Translates to: PSFTSFRGGLERGGISSSSVSRD*PQAAGQ Trigger: CTGGCCTGCTGCCTGAGGCCAGTCCCTGGACACACT...GCTGCTGGAGATCCCACCTCTCTCCAGTCCTCCTCGGAAGCTAGTGAAGCTAGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000641.15 |
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| 3UTR CAA 90 bp | GGACGGGGCCACGTGTCCTGCTGCCCTTCCCACCAGAAGGTCACTTaGGGAACTTTGCTCAAAGTTGAAGAAGCGCTGTGGGGTGATGGG | + |
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Preference number: 2 (lower is better) Translates to: GRGHVSCCPSHQKVT*GTLLKVEEALWGDG Trigger: CCCATCACCCCACAGCGCTTCTTCAACTTTGAGCAAAGTTCCCAAAGTGACCTTCTGGTGGGAAGGGCAGCAGGACACGTGGCCCCGTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000641.15 |
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| 3UTR-3UTR CCA 90 bp | GAGAAGGACGGGGCCACGTGTCCTGCTGCCCTTCCCACCAGAAGGTCACTTTGGAATCAGGCAAAGGTCTaGCCCTCAGCTCATCCAGGT | + |
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Preference number: 2 (lower is better) Translates to: EKDGATCPAALPTRRSLWNQAKV*PSAHPG Trigger: ACCTGGATGAGCTGAGGGCCAGACCTTTGCCTGATT...CCAAAGTGACCTTCTGGTGGGAAGGGCAGCAGGACACGTGGCCCCGTCCTTCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000641.15 |
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| 3UTR CAA 90 bp | CACGTGTCCTGCTGCCCTTCCCACCAGAAGGTCACTTTGGGAACTTaGCTCAAAGTTGAAGAAGCGCTGTGGGGTGATGGGGTCGTGTGG | + |
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Preference number: 2 (lower is better) Translates to: HVSCCPSHQKVTLGT*LKVEEALWGDGVVW Trigger: CCACACGACCCCATCACCCCACAGCGCTTCTTCAACTTTGAGCAAAGTTCCCAAAGTGACCTTCTGGTGGGAAGGGCAGCAGGACACGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000641.15 |
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| 3UTR-3UTR CCA 90 bp | AGCAGGCCAGGGAGGAACTGCCTCACAGCAACACCTCCTCCATTTATGTGGCCCTCATCCACACACACCTaGACAGGTCTTCGAGGCACA | + |
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Preference number: 2 (lower is better) Translates to: SRPGRNCLTATPPPFMWPSSTHT*TGLRGT Trigger: TGTGCCTCGAAGACCTGTCCAGGTGTGTGTGGATGA...GGGCCACATAAATGGAGGAGGTGTTGCTGTGAGGCAGTTCCTCCCTGGCCTGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000641.15 |
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| 3UTR CAA 90 bp | GCTGCCCTTCCCACCAGAAGGTCACTTTGGGAACTTTGCTCAAAGTaGAAGAAGCGCTGTGGGGTGATGGGGTCGTGTGGTTTCCCTCAC | + |
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Preference number: 2 (lower is better) Translates to: AALPTRRSLWELCSK*KKRCGVMGSCGFPH Trigger: GTGAGGGAAACCACACGACCCCATCACCCCACAGCGCTTCTTCAACTTTGAGCAAAGTTCCCAAAGTGACCTTCTGGTGGGAAGGGCAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000641.15 |
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| 3UTR-3UTR TCA 90 bp | CCTAGCTTCACTAGCTTCCGAGGAGGACTGGAGAGAGGTGGGATCTCCAGCAGCGGGACAAAGGGAAACTaGGTTGGGAGAGATCTCAAG | + |
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Preference number: 2 (lower is better) Translates to: PSFTSFRGGLERGGISSSGTKGN*VGRDLK Trigger: CTTGAGATCTCTCCCAACTCAGTTTCCCTTTGTCCC...GCTGCTGGAGATCCCACCTCTCTCCAGTCCTCCTCGGAAGCTAGTGAAGCTAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000641.15 |
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| 3UTR-3UTR GCA 90 bp | CACACACACACACGCACGCACGCACACATGCCACACATGGACAGACATTTCTTTGCAGTCCGGGGATCATaGGCTCCCCAGAGTCAGCAA | + |
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Preference number: 2 (lower is better) Translates to: HTHTRTHAHMPHMDRHFFAVRGS*APQSQQ Trigger: TTGCTGACTCTGGGGAGCGCATGATCCCCGGACTGC...AAAGAAATGTCTGTCCATGTGTGGCATGTGTGCGTGCGTGCGTGTGTGTGTGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000641.15 |
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| 3UTR-3UTR GCA 90 bp | GATGAAAGCCATCACACACACACACACACACACACACACACACACACACACACGGGCCACGTGTCCTGCTaGCCTTCCCACCAGAAGGTC | + |
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Preference number: 2 (lower is better) Translates to: DESHHTHTHTHTHTHTHTGHVSC*PSHQKV Trigger: GACCTTCTGGTGGGAAGGGCAGCAGGACACGTGGCC...CGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGATGGCTTTCATC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000641.15 |
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| 3UTR-3UTR CCA 90 bp | CCAGGGATGGACGAGGCACATTCACAGGCCAAGAGCAGGACGGAGCAGATGCAGTCCAGAGATTGCTCATaGCTGGCAGTCATTTTCCTG | + |
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Preference number: 2 (lower is better) Translates to: PGMDEAHSQAKSRTEQMQSRDCS*LAVIFL Trigger: CAGGAAAATGACTGCCAGCCATGAGCAATCTCTGGA...CTGCATCTGCTCCGTCCTGCTCTTGGCCTGTGAATGTGCCTCGTCCATCCCTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000641.15 |
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| 3UTR-3UTR TCA 90 bp | GGGATGGACGAGGCACATTCACAGGCCAAGAGCAGGACGGAGCAGATGCAGCGCACCTCATTAAGGCCTTaGGAATCTGATGAAAGCCAT | + |
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Preference number: 2 (lower is better) Translates to: GMDEAHSQAKSRTEQMQRTSLRP*ESDESH Trigger: ATGGCTTTCATCAGATTCTCAAGGCCTTAATGAGGT...GCGCTGCATCTGCTCCGTCCTGCTCTTGGCCTGTGAATGTGCCTCGTCCATCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000641.15 |
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| 3UTR-3UTR CCA 90 bp | GGGATGGACGAGGCACATTCACAGGCCAAGAGCAGGACGGAGCAGATGCAGCGCTCCTACACACTTTTCTaGGTTCCTTTTGTCATCCCT | + |
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Preference number: 2 (lower is better) Translates to: GMDEAHSQAKSRTEQMQRSYTLF*VPFVIP Trigger: AGGGATGACAAAAGGAACCCAGAAAAGTGTGTAGGA...GCGCTGCATCTGCTCCGTCCTGCTCTTGGCCTGTGAATGTGCCTCGTCCATCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000641.15 |
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| 3UTR-3UTR GCA 90 bp | GGGATGGACGAGGCACATTCACAGGCCAAGAGCAGGACGGAGCAGATGCAGCGCGGACAGACATTTCTTTaGATACAATTTCAGGGAGTC | + |
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Preference number: 2 (lower is better) Translates to: GMDEAHSQAKSRTEQMQRGQTFL*IQFQGV Trigger: GACTCCCTGAAATTGTATGCAAAGAAATGTCTGTCC...GCGCTGCATCTGCTCCGTCCTGCTCTTGGCCTGTGAATGTGCCTCGTCCATCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000641.15 |
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| 3UTR-3UTR GCA 90 bp | CGCCCCCAGCCATTACAGCTGCTGACCGTTGAGCTGGCTCAAAAGGACATTTCCTCAAGTCTTTCAACCTaGTGGAAACTGGACACATCC | + |
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Preference number: 2 (lower is better) Translates to: RPQPLQLLTVELAQKDISSSLST*WKLDTS Trigger: GGATGTGTCCAGTTTCCAGCAGGTTGAAAGACTTGA...GGAAATGTCCTTTTGAGCCAGCTCAACGGTCAGCAGCTGTAATGGCTGGGGGCG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000203271.2 |
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| 3UTR-3UTR TCA 90 bp | CACACACACACACGCACGCACGCACACATGCCACACATGGACAGACATTTCTTTACAGACACTGACGTGTaGTCACACAGACTCCAAGAG | + |
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Preference number: 2 (lower is better) Translates to: HTHTRTHAHMPHMDRHFFTDTDV*SHRLQE Trigger: CTCTTGGAGTCTGTGTGATCACACGTCAGTGTCTGT...AAAGAAATGTCTGTCCATGTGTGGCATGTGTGCGTGCGTGCGTGTGTGTGTGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000641.15 |
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| 3UTR-3UTR GCA 90 bp | GACTCGGGAGGTCTCCGTGAAGAAAAAGAAGATTTCATCGTCTCCATCTTCATCGGGTTAAAGCGAAGATaGTGTCCCGTGCACCGACGT | + |
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Preference number: 2 (lower is better) Translates to: DSGGLREEKEDFIVSIFIGLKRR*CPVHRR Trigger: ACGTCGGTGCACGGGACAGCATCTTCGCTTTAACCC...GATGAAGATGGAGACGATGAAATCTTCTTTTTCTTCACGGAGACCTCCCGAGTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000203271.2 |
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| 3UTR-3UTR GCA 90 bp | TCCAAGACTCGGGAGGTCTCCGTGAAGAAAAAGAAGATTTCATCGTCTCCATCTGCTCAGGACCATAGCTaGGACAAAGGCTGGGGCATT | + |
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Preference number: 2 (lower is better) Translates to: SKTREVSVKKKKISSSPSAQDHS*DKGWGI Trigger: AATGCCCCAGCCTTTGTCGCAGCTATGGTCCTGAGC...AGATGGAGACGATGAAATCTTCTTTTTCTTCACGGAGACCTCCCGAGTCTTGGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000203271.2 |
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| 3UTR-3UTR CCA 90 bp | TCATCCACACACACCTGGACAGGTCTTCGAGGCACACCAGTGTATAGACACACACCAGAGTCAGCAAACTaGAAAATCATCATACAGGCA | + |
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Preference number: 2 (lower is better) Translates to: SSTHTWTGLRGTPVYRHTPESAN*KIIIQA Trigger: TGCCTGTATGATGATTTTCCAGTTTGCTGACTCTGG...TGTGTGTCTATACACTGGTGTGCCTCGAAGACCTGTCCAGGTGTGTGTGGATGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000641.15 |
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| 3UTR-3UTR CCA 90 bp | GATGAAAGCCATCACACACACACACACACACACACACACACACACACACACACGAAAGGGAAACTGAGTTaGGAGAGATCTCAAGGCAGT | + |
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Preference number: 2 (lower is better) Translates to: DESHHTHTHTHTHTHTHTKGKLS*ERSQGS Trigger: ACTGCCTTGAGATCTCTCCCAACTCAGTTTCCCTTT...CGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGATGGCTTTCATC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000641.15 |
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| 3UTR-3UTR CCA 90 bp | GATGAAAGCCATCACACACACACACACACACACACACACACACACACACACACGACCAGAAGGTCACTTTaGGAACTTTGCTCAAAGTTG | + |
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Preference number: 2 (lower is better) Translates to: DESHHTHTHTHTHTHTHTTRRSL*ELCSKL Trigger: CAACTTTGAGCAAAGTTCCCAAAGTGACCTTCTGGT...CGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGATGGCTTTCATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000641.15 |
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| 3UTR-3UTR GCA 90 bp | AGGGCAAGGGTGAAAGTCACTGAGGCAAATCTTCTTGAACCTGCTTGTAATTTCTCACTTTGGGAACTTTaGTCAAAGTTGAAGAAGCGC | + |
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Preference number: 2 (lower is better) Translates to: RARVKVTEANLLEPACNFSLWEL*SKLKKR Trigger: GCGCTTCTTCAACTTTGAGCAAAGTTCCCAAAGTGA...GAAATTACAAGCAGGTTCAAGAAGATTTGCCTCAGTGACTTTCACCCTTGCCCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000641.15 |
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| 3UTR CCA 72 bp | GCATCCTCACCGGGGTTCGAGGTCCCTCACCAGGGATaGACGAGGCACATTCACAGGCCAAGAGCAGGACGG | + |
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Preference number: 3 (lower is better) Translates to: ASSPGFEVPHQG*TRHIHRPRAGR Trigger: CCGTCCTGCTCTTGGCCTGTGAATGTGCCTCGTCCATCCCTGGTGAGGGACCTCGAACCCCGGTGAGGATGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000641.15 |
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| 3UTR TCA 72 bp | GGTCCCCCGCACACACACGGGCCACTCGTGGGACCTTaGTGCGCTCATATGAGTCCAAGACTCGGGAGGTCT | + |
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Preference number: 3 (lower is better) Translates to: GPPHTHGPLVGP*CAHMSPRLGRS Trigger: AGACCTCCCGAGTCTTGGACTCATATGAGCGCATCAAGGTCCCACGAGTGGCCCGTGTGTGTGCGGGGGACC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000203271.2 |
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| 3UTR GCA 72 bp | CAGGGACTGGCCTCAGGCAGCAGGCCAGGGAGGAACTaGCTCACAGCAACACCTCCTCCATTTATGTGGCCC | + |
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Preference number: 3 (lower is better) Translates to: QGLASGSRPGRN*LTATPPPFMWP Trigger: GGGCCACATAAATGGAGGAGGTGTTGCTGTGAGGCAGTTCCTCCCTGGCCTGCTGCCTGAGGCCAGTCCCTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000641.15 |
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| 3UTR TCA 72 bp | AGCAGGTCAGCCTTTAGAAACGTCGTCCATCTCTGCTaGAGGGTCTTCCGGCCCCCAAGGTCCCCCGCACAC | + |
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Preference number: 3 (lower is better) Translates to: SRSAFRNVVHLC*RVFRPPRSPAH Trigger: GTGTGCGGGGGACCTTGGGGGCCGGAAGACCCTTCAGCAGAGATGGACGACGTTTCTAAAGGCTGACCTGCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000203271.2 |
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| 3UTR-3UTR CAA 90 bp | CACCTAGGCACCGGCCCTGTCATCCACACACACCTGGACAGGTCTTCGAGGCACCAGAGGGCTACAGGGTaGATCTCTCATGAGAATCAG | + |
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Preference number: 3 (lower is better) Translates to: HLGTGPVIHTHLDRSSRHQRATG*ISHENQ Trigger: CTGATTCTCATGAGAGATCAACCCTGTAGCCCTCTG...GTGCCTCGAAGACCTGTCCAGGTGTGTGTGGATGACAGGGCCGGTGCCTAGGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000641.15 |
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| 3UTR CCA 72 bp | GTGCAGAGCCTAGCTTCACTAGCTTCCGAGGAGGACTaGAGAGAGGTGGGATCTCCAGCAGCAGTGTGTCCA | + |
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Preference number: 3 (lower is better) Translates to: VQSLASLASEED*REVGSPAAVCP Trigger: TGGACACACTGCTGCTGGAGATCCCACCTCTCTCCAGTCCTCCTCGGAAGCTAGTGAAGCTAGGCTCTGCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000641.15 |
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| 3UTR-3UTR CAA 90 bp | CCTAGCTTCACTAGCTTCCGAGGAGGACTGGAGAGAGGTGGGATCTCCAGCAGCCAAAGGGAAACTGAGTaGGGAGAGATCTCAAGGCAG | + |
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Preference number: 3 (lower is better) Translates to: PSFTSFRGGLERGGISSSQRETE*GEISRQ Trigger: CTGCCTTGAGATCTCTCCCAACTCAGTTTCCCTTTG...GCTGCTGGAGATCCCACCTCTCTCCAGTCCTCCTCGGAAGCTAGTGAAGCTAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000641.15 |
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| 3UTR TCA 72 bp | CACACGGGCCACTCGTGGGACCTTGATGCGCTCATATaGGTCCAAGACTCGGGAGGTCTCCGTGAAGAAAAA | + |
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Preference number: 3 (lower is better) Translates to: HTGHSWDLDALI*VQDSGGLREEK Trigger: TTTTTCTTCACGGAGACCTCCCGAGTCTTGGACTCATATGAGCGCATCAAGGTCCCACGAGTGGCCCGTGTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203271.2 |
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| 3UTR TCA 72 bp | CAGCTCATCCAGGTCCAGAGGACAGACACTGACGTGTaGTCACACAGACTCCAAGAGAATGGAGCAGCCATG | + |
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Preference number: 3 (lower is better) Translates to: QLIQVQRTDTDV*SHRLQENGAAM Trigger: CATGGCTGCTCCATTCTCTTGGAGTCTGTGTGATCACACGTCAGTGTCTGTCCTCTGGACCTGGATGAGCTG 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000641.15 |
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| 3UTR TCA 72 bp | CATAGCTGCGACAAAGGCTGGGGCATTAAGCCAGGATaGCAAGGTCTCTGTTCGAATCCAGTCCTCAGCTCG | + |
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Preference number: 3 (lower is better) Translates to: HSCDKGWGIKPG*QGLCSNPVLSS Trigger: CGAGCTGAGGACTGGATTCGAACAGAGACCTTGTCATCCTGGCTTAATGCCCCAGCCTTTGTCGCAGCTATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203271.2 |
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| 3UTR GCA 72 bp | AGGCACATTCACAGGCCAAGAGCAGGACGGAGCAGATaGAGCGCACACAGGAATAACGAAGCAAGAAAGGAG | + |
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Preference number: 3 (lower is better) Translates to: RHIHRPRAGRSR*SAHRNNEARKE Trigger: CTCCTTTCTTGCTTCGTTATTCCTGTGTGCGCTGCATCTGCTCCGTCCTGCTCTTGGCCTGTGAATGTGCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000641.15 |
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| 3UTR GCA 72 bp | GCTTTTCCCCAGAGAAGGGCAGGGTTAAAGCGAAGATaGTGTCCCGTGCACCGACGTAAAGTGTGTGAGAAG | + |
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Preference number: 3 (lower is better) Translates to: AFPQRRAGLKRR*CPVHRRKVCEK Trigger: CTTCTCACACACTTTACGTCGGTGCACGGGACAGCATCTTCGCTTTAACCCTGCCCTTCTCTGGGGAAAAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000203271.2 |
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| 3UTR CCA 72 bp | ACGTGTCCTGCTGCCCTTCCCACCAGAAGGTCACTTTaGGAACTTTGCTCAAAGTTGAAGAAGCGCTGTGGG | + |
|
Preference number: 3 (lower is better) Translates to: TCPAALPTRRSL*ELCSKLKKRCG Trigger: CCCACAGCGCTTCTTCAACTTTGAGCAAAGTTCCCAAAGTGACCTTCTGGTGGGAAGGGCAGCAGGACACGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000641.15 |
||
| 3UTR-3UTR CAA 90 bp | GGGATGGACGAGGCACATTCACAGGCCAAGAGCAGGACGGAGCAGATGCAGCGCTGGACAGACATTTCTTaGCATACAATTTCAGGGAGT | + |
|
Preference number: 3 (lower is better) Translates to: GMDEAHSQAKSRTEQMQRWTDIS*HTISGS Trigger: ACTCCCTGAAATTGTATGCAAAGAAATGTCTGTCCA...GCGCTGCATCTGCTCCGTCCTGCTCTTGGCCTGTGAATGTGCCTCGTCCATCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000641.15 |
||
| 3UTR CCA 72 bp | ACTTTGGGAACTTTGCTCAAAGTTGAAGAAGCGCTGTaGGGTGATGGGGTCGTGTGGTTTCCCTCACTGGCT | + |
|
Preference number: 3 (lower is better) Translates to: TLGTLLKVEEAL*GDGVVWFPSLA Trigger: AGCCAGTGAGGGAAACCACACGACCCCATCACCCCACAGCGCTTCTTCAACTTTGAGCAAAGTTCCCAAAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000641.15 |
||
| 3UTR TCA 72 bp | CCCAAGACAAGAGGCCATAGCAGAGGGCTACAGGGTTaGTCTCTCATGAGAATCAGGAATCAGGCAAAGGTC | + |
|
Preference number: 3 (lower is better) Translates to: PKTRGHSRGLQG*SLMRIRNQAKV Trigger: GACCTTTGCCTGATTCCTGATTCTCATGAGAGATCAACCCTGTAGCCCTCTGCTATGGCCTCTTGTCTTGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000641.15 |
||
| 3UTR GCA 72 bp | GGACATTTCCCCCGGCCACTCTCAAGTCTTTCAACCTaGTGGAAACTGGACACATCCTCTTTCTTGCCTTTC | + |
|
Preference number: 3 (lower is better) Translates to: GHFPRPLSSLST*WKLDTSSFLPF Trigger: GAAAGGCAAGAAAGAGGATGTGTCCAGTTTCCAGCAGGTTGAAAGACTTGAGAGTGGCCGGGGGAAATGTCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000203271.2 |
||
| 3UTR GCA 72 bp | TGCATACAATTTCAGGGAGTCCTGCTAGGGGACTCCTaGTTTAGGGCAAGGGTGAAAGTCACTGAGGCAAAT | + |
|
Preference number: 3 (lower is better) Translates to: CIQFQGVLLGDS*FRARVKVTEAN Trigger: ATTTGCCTCAGTGACTTTCACCCTTGCCCTAAAGCAGGAGTCCCCTAGCAGGACTCCCTGAAATTGTATGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000641.15 |
||
| 3UTR-3UTR CAA 90 bp | CACACACACACACGCACGCACGCACACATGCCACACATGGACAGACATTTCTTTGTCACTTTGGGAACTTaGCTCAAAGTTGAAGAAGCG | + |
|
Preference number: 3 (lower is better) Translates to: HTHTRTHAHMPHMDRHFFVTLGT*LKVEEA Trigger: CGCTTCTTCAACTTTGAGCAAAGTTCCCAAAGTGAC...AAAGAAATGTCTGTCCATGTGTGGCATGTGTGCGTGCGTGCGTGTGTGTGTGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000641.15 |
||
| 3UTR GCA 72 bp | CACACACACACACACACACACGCACGCACGCACACATaGCACACATGGACAGACATTTCTTTGCATACAATT | + |
|
Preference number: 3 (lower is better) Translates to: HTHTHTHARTHT*HTWTDISLHTI Trigger: AATTGTATGCAAAGAAATGTCTGTCCATGTGTGGCATGTGTGCGTGCGTGCGTGTGTGTGTGTGTGTGTGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000641.15 |
||
| 3UTR TCA 72 bp | AGCAACCCTGAGGTAGGTATATCCCCACTTTACAGATaGATAACCAATGTCCCTAGGTTAGACTACGTGCCA | + |
|
Preference number: 3 (lower is better) Translates to: SNPEVGISPLYR*ITNVPRLDYVP Trigger: TGGCACGTAGTCTAACCTAGGGACATTGGTTATTCATCTGTAAAGTGGGGATATACCTACCTCAGGGTTGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000641.15 |
||
| 3UTR TCA 72 bp | ACTATGGACCATGGTCCTTTAACCTCATTAAGGCCTTaGGAATCTGATGAAAGCCATCACACACACACACAC | + |
|
Preference number: 3 (lower is better) Translates to: TMDHGPLTSLRP*ESDESHHTHTH Trigger: GTGTGTGTGTGTGTGATGGCTTTCATCAGATTCTCAAGGCCTTAATGAGGTTAAAGGACCATGGTCCATAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000641.15 |
||
| 3UTR GCA 72 bp | ATGCTTTATTGTTCATACGTTTCCTCGTTTGATCCTTaGAGCAACCCTGAGGTAGGTATATCCCCACTTTAC | + |
|
Preference number: 3 (lower is better) Translates to: MLYCSYVSSFDP*SNPEVGISPLY Trigger: GTAAAGTGGGGATATACCTACCTCAGGGTTGCTGCAAGGATCAAACGAGGAAACGTATGAACAATAAAGCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000641.15 |
||
| CDS-3UTR TCA 90 bp | CACCGGCCCTGTCATCCACACACACCTGGACAGGTCTTCGAGGCACACCAGTGTCCAGAGGAGCCCCAGTaGGCCGGATGTGGGCTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: HRPCHPHTPGQVFEAHQCPEEPQ*AGCGLG Trigger: GCCCAGCCCACATCCGGCTCACTGGGGCTCCTCTGG...ACACTGGTGTGCCTCGAAGACCTGTCCAGGTGTGTGTGGATGACAGGGCCGGTG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000641.15 |
||
| CDS-3UTR TCA 90 bp | CCAGGGATGGACGAGGCACATTCACAGGCCAAGAGCAGGACGGAGCAGATGCAGTGTCGCCGCCGCTGCTaGCGGCGACCAATCAGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: PGMDEAHSQAKSRTEQMQCRRRC*RRPIRR Trigger: CCTCCTGATTGGTCGCCGTCAGCAGCGGCGGCGACA...CTGCATCTGCTCCGTCCTGCTCTTGGCCTGTGAATGTGCCTCGTCCATCCCTGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000641.15 |
||
| CDS-3UTR CCA 90 bp | GGGATGGACGAGGCACATTCACAGGCCAAGAGCAGGACGGAGCAGATGCAGCGCGGGGCGGCCATCAGCTaGAAACACGGGCCTGTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: GMDEAHSQAKSRTEQMQRGAAIS*KHGPVH Trigger: ATGGACAGGCCCGTGTTTCCAGCTGATGGCCGCCCC...GCGCTGCATCTGCTCCGTCCTGCTCTTGGCCTGTGAATGTGCCTCGTCCATCCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000641.15 |
||
| CDS-3UTR GCA 90 bp | GGGATGGACGAGGCACATTCACAGGCCAAGAGCAGGACGGAGCAGATGCAGCGCAGCCACCAAAACCACTaGCCCGCTTACCCAGGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: GMDEAHSQAKSRTEQMQRSHQNH*PAYPGP Trigger: TGGCCCTGGGTAAGCGGGGCAGTGGTTTTGGTGGCT...GCGCTGCATCTGCTCCGTCCTGCTCTTGGCCTGTGAATGTGCCTCGTCCATCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000641.15 |
||
| CDS-3UTR CCA 90 bp | GAGAAGGACGGGGCCACGTGTCCTGCTGCCCTTCCCACCAGAAGGTCACTTTGGAGTCAGCCTCGGAGATaGGCAGCGAGGTTCTGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: EKDGATCPAALPTRRSLWSQPRR*AARFWA Trigger: TGCCCAGAACCTCGCTGCCCATCTCCGAGGCTGACT...CCAAAGTGACCTTCTGGTGGGAAGGGCAGCAGGACACGTGGCCCCGTCCTTCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000641.15 |
||
| 3UTR CAA 72 bp | AGGTCCCCCGCACACACACGGGCCACTCGTGGGACCTaGATGCGCTCATATGAGTCCAAGACTCGGGAGGTC | + |
|
Preference number: 4 (lower is better) Translates to: RSPAHTRATRGT*MRSYESKTREV Trigger: GACCTCCCGAGTCTTGGACTCATATGAGCGCATCAAGGTCCCACGAGTGGCCCGTGTGTGTGCGGGGGACCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000203271.2 |
||
| CDS-3UTR TCA 90 bp | CCAGGGATGGACGAGGCACATTCACAGGCCAAGAGCAGGACGGAGCAGATGCAGCCACACGTGAGGAGGTaGGAGGCATTGGCAATGGCG | + |
|
Preference number: 4 (lower is better) Translates to: PGMDEAHSQAKSRTEQMQPHVRR*EALAMA Trigger: CGCCATTGCCAATGCCTCTCACCTCCTCACGTGTGG...CTGCATCTGCTCCGTCCTGCTCTTGGCCTGTGAATGTGCCTCGTCCATCCCTGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000641.15 |
||
| CDS-3UTR CCA 90 bp | CCAGGGATGGACGAGGCACATTCACAGGCCAAGAGCAGGACGGAGCAGATGCAGTGCACTCTCCAGGTCTaGGCTGGGGCACCTCGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: PGMDEAHSQAKSRTEQMQCTLQV*AGAPRC Trigger: ACAACGAGGTGCCCCAGCCCAGACCTGGAGAGTGCA...CTGCATCTGCTCCGTCCTGCTCTTGGCCTGTGAATGTGCCTCGTCCATCCCTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000641.15 |
||
| CDS-3UTR TCA 90 bp | AGCAGGCCAGGGAGGAACTGCCTCACAGCAACACCTCCTCCATTTATGTGGCCCCATCCCTTCGTGGGGTaGGCGAAGTCACTCCACTGG | + |
|
Preference number: 4 (lower is better) Translates to: SRPGRNCLTATPPPFMWPHPFVG*AKSLHW Trigger: CCAGTGGAGTGACTTCGCTCACCCCACGAAGGGATG...GGGCCACATAAATGGAGGAGGTGTTGCTGTGAGGCAGTTCCTCCCTGGCCTGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000641.15 |
||
| CDS-3UTR GCA 90 bp | AGCAGGCCAGGGAGGAACTGCCTCACAGCAACACCTCCTCCATTTATGTGGCCCGTGCCACACACAGGATaGCCAGGCAGAACTGGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: SRPGRNCLTATPPPFMWPVPHTG*PGRTGG Trigger: TCCCCCAGTTCTGCCTGGGCATCCTGTGTGTGGCAC...GGGCCACATAAATGGAGGAGGTGTTGCTGTGAGGCAGTTCCTCCCTGGCCTGCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000000641.15 |
||
| CDS-3UTR CCA 90 bp | CACCGGCCCTGTCATCCACACACACCTGGACAGGTCTTCGAGGCACACCAGTGTCACACACAGCAGAAATaGCGGCTCCTTCCCACTGGG | + |
|
Preference number: 4 (lower is better) Translates to: HRPCHPHTPGQVFEAHQCHTQQK*RLLPTG Trigger: CCCAGTGGGAAGGAGCCGCCATTTCTGCTGTGTGTG...ACACTGGTGTGCCTCGAAGACCTGTCCAGGTGTGTGTGGATGACAGGGCCGGTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000641.15 |
||
| CDS-3UTR CCA 90 bp | CACCGGCCCTGTCATCCACACACACCTGGACAGGTCTTCGAGGCACACCAGTGTACTGCCCGGATGTCTTaGGGTCGGAAGGCACACACA | + |
|
Preference number: 4 (lower is better) Translates to: HRPCHPHTPGQVFEAHQCTARMS*GRKAHT Trigger: TGTGTGTGCCTTCCGACCCCAAGACATCCGGGCAGT...ACACTGGTGTGCCTCGAAGACCTGTCCAGGTGTGTGTGGATGACAGGGCCGGTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000641.15 |
||
| CDS-3UTR GCA 90 bp | GAGAAGGACGGGGCCACGTGTCCTGCTGCCCTTCCCACCAGAAGGTCACTTTGGGGAGACGGCCACAGTTaGTGGTGTTCACTTGTGTCA | + |
|
Preference number: 4 (lower is better) Translates to: EKDGATCPAALPTRRSLWGDGHS*WCSLVS Trigger: TGACACAAGTGAACACCAGCAACTGTGGCCGTCTCC...CCAAAGTGACCTTCTGGTGGGAAGGGCAGCAGGACACGTGGCCCCGTCCTTCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000641.15 |
||
| CDS-3UTR CCA 90 bp | CCTAGCTTCACTAGCTTCCGAGGAGGACTGGAGAGAGGTGGGATCTCCAGCAGCCACACGGGCCACTCGTaGGACCTTGATGCGCTCATA | + |
|
Preference number: 4 (lower is better) Translates to: PSFTSFRGGLERGGISSSHTGHS*DLDALI Trigger: TATGAGCGCATCAAGGTCCCACGAGTGGCCCGTGTG...GCTGCTGGAGATCCCACCTCTCTCCAGTCCTCCTCGGAAGCTAGTGAAGCTAGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000641.15 |
||
| CDS-3UTR CCA 90 bp | CACCGGCCCTGTCATCCACACACACCTGGACAGGTCTTCGAGGCACACCAGTGTATCCAGCAGGAAGGGTaGAGGGAAGCCACCAAAACC | + |
|
Preference number: 4 (lower is better) Translates to: HRPCHPHTPGQVFEAHQCIQQEG*REATKT Trigger: GGTTTTGGTGGCTTCCCTCCACCCTTCCTGCTGGAT...ACACTGGTGTGCCTCGAAGACCTGTCCAGGTGTGTGTGGATGACAGGGCCGGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000641.15 |
||
| CDS-3UTR TCA 90 bp | CACACACACACACGCACGCACGCACACATGCCACACATGGACAGACATTTCTTTGGGCCGCAAACCGGGTaGGATAGGAGTCAGCCTCGG | + |
|
Preference number: 4 (lower is better) Translates to: HTHTRTHAHMPHMDRHFFGPQTG*DRSQPR Trigger: CCGAGGCTGACTCCTATCTCACCCGGTTTGCGGCCC...AAAGAAATGTCTGTCCATGTGTGGCATGTGTGCGTGCGTGCGTGTGTGTGTGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000641.15 |
||
| CDS-3UTR TCA 90 bp | CCAGGGATGGACGAGGCACATTCACAGGCCAAGAGCAGGACGGAGCAGATGCAGAGCCATTACAGCTGCTaGCCGTTGAGCTGGCTCAAA | + |
|
Preference number: 4 (lower is better) Translates to: PGMDEAHSQAKSRTEQMQSHYSC*PLSWLK Trigger: TTTGAGCCAGCTCAACGGTCAGCAGCTGTAATGGCT...CTGCATCTGCTCCGTCCTGCTCTTGGCCTGTGAATGTGCCTCGTCCATCCCTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000641.15 |
||
| CDS-3UTR TCA 90 bp | CACCGGCCCTGTCATCCACACACACCTGGACAGGTCTTCGAGGCACACCAGTGTATCATATTCTTTCCCTaGGAGGCTGGTCACCCGGTG | + |
|
Preference number: 4 (lower is better) Translates to: HRPCHPHTPGQVFEAHQCIIFFP*EAGHPV Trigger: CACCGGGTGACCAGCCTCTCAGGGAAAGAATATGAT...ACACTGGTGTGCCTCGAAGACCTGTCCAGGTGTGTGTGGATGACAGGGCCGGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000641.15 |
||
| CDS-3UTR CCA 90 bp | CCAGGGATGGACGAGGCACATTCACAGGCCAAGAGCAGGACGGAGCAGATGCAGGGAGGTGAGAGGCATTaGCAATGGCGAGAATCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: PGMDEAHSQAKSRTEQMQGGERH*QWRESG Trigger: TCCAGATTCTCGCCATTGCCAATGCCTCTCACCTCC...CTGCATCTGCTCCGTCCTGCTCTTGGCCTGTGAATGTGCCTCGTCCATCCCTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000641.15 |
||
| CDS-3UTR TCA 90 bp | CACCTAGGCACCGGCCCTGTCATCCACACACACCTGGACAGGTCTTCGAGGCACGGCATTAAGCCAGGATaGCAAGGTCTCTGTTCGAAT | + |
|
Preference number: 4 (lower is better) Translates to: HLGTGPVIHTHLDRSSRHGIKPG*QGLCSN Trigger: ATTCGAACAGAGACCTTGTCATCCTGGCTTAATGCC...GTGCCTCGAAGACCTGTCCAGGTGTGTGTGGATGACAGGGCCGGTGCCTAGGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000641.15 |
||
| CDS-3UTR GCA 90 bp | CACCTAGGCACCGGCCCTGTCATCCACACACACCTGGACAGGTCTTCGAGGCACCAGGTAGTCCCCTGTTaGAGTCATGTTTTAGCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: HLGTGPVIHTHLDRSSRHQVVPC*SHVLAL Trigger: GAGAGCTAAAACATGACTGCAACAGGGGACTACCTG...GTGCCTCGAAGACCTGTCCAGGTGTGTGTGGATGACAGGGCCGGTGCCTAGGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000641.15 |
||
| CDS-3UTR CCA 90 bp | TCCAAGACTCGGGAGGTCTCCGTGAAGAAAAAGAAGATTTCATCGTCTCCATCTTGGGCAGCGAGGTTCTaGGCACCGAGCGGGGGACGC | + |
|
Preference number: 4 (lower is better) Translates to: SKTREVSVKKKKISSSPSWAARF*APSGGR Trigger: GCGTCCCCCGCTCGGTGCCCAGAACCTCGCTGCCCA...AGATGGAGACGATGAAATCTTCTTTTTCTTCACGGAGACCTCCCGAGTCTTGGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000203271.2 |
||
| CDS-3UTR TCA 90 bp | CACCTAGGCACCGGCCCTGTCATCCACACACACCTGGACAGGTCTTCGAGGCACCTCGGGAGGTCTCCGTaGAGAAAAAGAAGATTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: HLGTGPVIHTHLDRSSRHLGRSP*RKRRFH Trigger: ATGAAATCTTCTTTTTCTTCACGGAGACCTCCCGAG...GTGCCTCGAAGACCTGTCCAGGTGTGTGTGGATGACAGGGCCGGTGCCTAGGTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000000641.15 |
||
| CDS-3UTR TCA 90 bp | AGGTCCAGAGGACAGACACTGACGTGTGATCACACAGACTCCAAGAGAATGGAGGATCCTCCAGGACACTaGGCTGAGCTCCGATGCGCA | + |
|
Preference number: 4 (lower is better) Translates to: RSRGQTLTCDHTDSKRMEDPPGH*AELRCA Trigger: TGCGCATCGGAGCTCAGCTCAGTGTCCTGGAGGATC...CTCCATTCTCTTGGAGTCTGTGTGATCACACGTCAGTGTCTGTCCTCTGGACCT 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000641.15 |
||
| CDS-3UTR TCA 90 bp | CACACACACACACGCACGCACGCACACATGCCACACATGGACAGACATTTCTTTGGCCAGGATACATTCTaGGCAGCTCTGGAGACGGCC | + |
|
Preference number: 4 (lower is better) Translates to: HTHTRTHAHMPHMDRHFFGQDTF*AALETA Trigger: GGCCGTCTCCAGAGCTGCTCAGAATGTATCCTGGCC...AAAGAAATGTCTGTCCATGTGTGGCATGTGTGCGTGCGTGCGTGTGTGTGTGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000641.15 |
||
| CDS-3UTR GCA 90 bp | AGGTCCAGAGGACAGACACTGACGTGTGATCACACAGACTCCAAGAGAATGGAGGGGACCATTCAGCACTaGCCGGATGTCTTGGGGTCG | + |
|
Preference number: 4 (lower is better) Translates to: RSRGQTLTCDHTDSKRMEGTIQH*PDVLGS Trigger: CGACCCCAAGACATCCGGGCAGTGCTGAATGGTCCC...CTCCATTCTCTTGGAGTCTGTGTGATCACACGTCAGTGTCTGTCCTCTGGACCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000641.15 |
||
| CDS-3UTR CCA 90 bp | AGGGCAAGGGTGAAAGTCACTGAGGCAAATCTTCTTGAACCTGCTTGTAATTTCTGGGCAGCGAGGTTCTaGGCACCGAGCGGGGGACGC | + |
|
Preference number: 4 (lower is better) Translates to: RARVKVTEANLLEPACNFWAARF*APSGGR Trigger: GCGTCCCCCGCTCGGTGCCCAGAACCTCGCTGCCCA...GAAATTACAAGCAGGTTCAAGAAGATTTGCCTCAGTGACTTTCACCCTTGCCCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000000641.15 |
||
| CDS-3UTR CCA 90 bp | GGGATGGACGAGGCACATTCACAGGCCAAGAGCAGGACGGAGCAGATGCAGCGCGAGGATCCAAACTGCTaGAACTTCATGTTGTTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: GMDEAHSQAKSRTEQMQREDPNC*NFMLLV Trigger: CACCAACAACATGAAGTTCCAGCAGTTTGGATCCTC...GCGCTGCATCTGCTCCGTCCTGCTCTTGGCCTGTGAATGTGCCTCGTCCATCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000641.15 |
||
| CDS-3UTR CCA 90 bp | TCATCCACACACACCTGGACAGGTCTTCGAGGCACACCAGTGTATAGACACACAGTCACTCCACTGGGCTaGTGCCACACACAGGATGCC | + |
|
Preference number: 4 (lower is better) Translates to: SSTHTWTGLRGTPVYRHTVTPLG*CHTQDA Trigger: GGCATCCTGTGTGTGGCACCAGCCCAGTGGAGTGAC...TGTGTGTCTATACACTGGTGTGCCTCGAAGACCTGTCCAGGTGTGTGTGGATGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000641.15 |
||
| CDS-3UTR GCA 90 bp | GGGATGGACGAGGCACATTCACAGGCCAAGAGCAGGACGGAGCAGATGCAGCGCTCAAGTCTTTCAACCTaGTGGAAACTGGACACATCA | + |
|
Preference number: 4 (lower is better) Translates to: GMDEAHSQAKSRTEQMQRSSLST*WKLDTS Trigger: TGATGTGTCCAGTTTCCAGCAGGTTGAAAGACTTGA...GCGCTGCATCTGCTCCGTCCTGCTCTTGGCCTGTGAATGTGCCTCGTCCATCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000641.15 |
||
| CDS-3UTR CCA 90 bp | GATGAAAGCCATCACACACACACACACACACACACACACACACACACACACACGTCTCCAGGTCTGGGCTaGGGCACCTCGTTGTCCATG | + |
|
Preference number: 4 (lower is better) Translates to: DESHHTHTHTHTHTHTHTSPGLG*GTSLSM Trigger: CATGGACAACGAGGTGCCCCAGCCCAGACCTGGAGA...CGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGATGGCTTTCATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000641.15 |
||
| CDS-3UTR CCA 90 bp | TCATCCACACACACCTGGACAGGTCTTCGAGGCACACCAGTGTATAGACACACACTTTCCCTGAGAGGCTaGTCACCCGGTGAGCCACAA | + |
|
Preference number: 4 (lower is better) Translates to: SSTHTWTGLRGTPVYRHTLSLRG*SPGEPQ Trigger: TTGTGGCTCACCGGGTGACCAGCCTCTCAGGGAAAG...TGTGTGTCTATACACTGGTGTGCCTCGAAGACCTGTCCAGGTGTGTGTGGATGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000641.15 |
||
| 3UTR CAA 72 bp | CACGTGTCCTGCTGCCCTTCCCACCAGAAGGTCACTTaGGGAACTTTGCTCAAAGTTGAAGAAGCGCTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: HVSCCPSHQKVT*GTLLKVEEALW Trigger: CCACAGCGCTTCTTCAACTTTGAGCAAAGTTCCCAAAGTGACCTTCTGGTGGGAAGGGCAGCAGGACACGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000641.15 |
||
| CDS-3UTR TCA 90 bp | CACACACACACACGCACGCACGCACACATGCCACACATGGACAGACATTTCTTTCTACAGTTCTGTCTGTaGGTCTCGGGCACCATCCAG | + |
|
Preference number: 4 (lower is better) Translates to: HTHTRTHAHMPHMDRHFFLQFCL*VSGTIQ Trigger: CTGGATGGTGCCCGAGACTCACAGACAGAACTGTAG...AAAGAAATGTCTGTCCATGTGTGGCATGTGTGCGTGCGTGCGTGTGTGTGTGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000641.15 |
||
| CDS-3UTR TCA 90 bp | AGGTCCAGAGGACAGACACTGACGTGTGATCACACAGACTCCAAGAGAATGGAGGCTGACTCTATGTCTTaGACCATCCCACGGTGCTCG | + |
|
Preference number: 4 (lower is better) Translates to: RSRGQTLTCDHTDSKRMEADSMS*TIPRCS Trigger: CGAGCACCGTGGGATGGTTCAAGACATAGAGTCAGC...CTCCATTCTCTTGGAGTCTGTGTGATCACACGTCAGTGTCTGTCCTCTGGACCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000641.15 |
||
| CDS-3UTR TCA 90 bp | AGGTCCAGAGGACAGACACTGACGTGTGATCACACAGACTCCAAGAGAATGGAGCCGTTCATCTTCAGGTaGAGGAGAGGGAGGGTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: RSRGQTLTCDHTDSKRMEPFIFR*RRGRVL Trigger: CAAGACCCTCCCTCTCCTTCACCTGAAGATGAACGG...CTCCATTCTCTTGGAGTCTGTGTGATCACACGTCAGTGTCTGTCCTCTGGACCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000641.15 |
||
| CDS-3UTR GCA 90 bp | TCATCCACACACACCTGGACAGGTCTTCGAGGCACACCAGTGTATAGACACACAAGCTCTGTCATATCCTaGAGAACCCCCGAGGCCCTT | + |
|
Preference number: 4 (lower is better) Translates to: SSTHTWTGLRGTPVYRHTSSVIS*RTPEAL Trigger: AAGGGCCTCGGGGGTTCTGCAGGATATGACAGAGCT...TGTGTGTCTATACACTGGTGTGCCTCGAAGACCTGTCCAGGTGTGTGTGGATGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000000641.15 |
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| CDS-3UTR TCA 90 bp | CACACACACACACGCACGCACGCACACATGCCACACATGGACAGACATTTCTTTACAGCTGCTGACCGTTaGGCTGGCTCAAAAGGACAT | + |
|
Preference number: 4 (lower is better) Translates to: HTHTRTHAHMPHMDRHFFTAADR*AGSKGH Trigger: ATGTCCTTTTGAGCCAGCTCAACGGTCAGCAGCTGT...AAAGAAATGTCTGTCCATGTGTGGCATGTGTGCGTGCGTGCGTGTGTGTGTGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000641.15 |
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| CDS-3UTR TCA 90 bp | AGGGCAAGGGTGAAAGTCACTGAGGCAAATCTTCTTGAACCTGCTTGTAATTTCGTCGTCCATCTCTGCTaGAGGGTCTTCCGGCCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: RARVKVTEANLLEPACNFVVHLC*RVFRPP Trigger: TGGGGGCCGGAAGACCCTTCAGCAGAGATGGACGAC...GAAATTACAAGCAGGTTCAAGAAGATTTGCCTCAGTGACTTTCACCCTTGCCCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000000641.15 |
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| CDS-3UTR GCA 90 bp | GATGAAAGCCATCACACACACACACACACACACACACACACACACACACACACGGGGTTAAAGCGAAGATaGTGTCCCGTGCACCGACGT | + |
|
Preference number: 4 (lower is better) Translates to: DESHHTHTHTHTHTHTHTGLKRR*CPVHRR Trigger: ACGTCGGTGCACGGGACAGCATCTTCGCTTTAACCC...CGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGATGGCTTTCATC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000641.15 |
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| CDS-3UTR GCA 90 bp | GATGAAAGCCATCACACACACACACACACACACACACACACACACACACACACGGCTCAGGACCATAGCTaGGACAAAGGCTGGGGCATT | + |
|
Preference number: 4 (lower is better) Translates to: DESHHTHTHTHTHTHTHTAQDHS*DKGWGI Trigger: AATGCCCCAGCCTTTGTCGCAGCTATGGTCCTGAGC...CGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGATGGCTTTCATC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000641.15 |
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| CDS-3UTR CCA 90 bp | CACACACACACACGCACGCACGCACACATGCCACACATGGACAGACATTTCTTTTGTGTCACCTCAGTATaGGAGCCCACCAGAAGCCAA | + |
|
Preference number: 4 (lower is better) Translates to: HTHTRTHAHMPHMDRHFFCVTSV*EPTRSQ Trigger: TTGGCTTCTGGTGGGCTCCCATACTGAGGTGACACA...AAAGAAATGTCTGTCCATGTGTGGCATGTGTGCGTGCGTGCGTGTGTGTGTGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000641.15 |
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| CDS-3UTR CCA 90 bp | GATGAAAGCCATCACACACACACACACACACACACACACACACACACACACACGCATTCTGAGCAGCTCTaGAGACGGCCACAGTTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: DESHHTHTHTHTHTHTHTHSEQL*RRPQLL Trigger: CAGCAACTGTGGCCGTCTCCAGAGCTGCTCAGAATG...CGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGATGGCTTTCATC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000641.15 |
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| CDS-3UTR CCA 90 bp | CACCGGCCCTGTCATCCACACACACCTGGACAGGTCTTCGAGGCACACCAGTGTTTCTCCAGGTTCTTTTaGACACAAAGAAGAGACATC | + |
|
Preference number: 4 (lower is better) Translates to: HRPCHPHTPGQVFEAHQCFSRFF*TQRRDI Trigger: GATGTCTCTTCTTTGTGTCCAAAAGAACCTGGAGAA...ACACTGGTGTGCCTCGAAGACCTGTCCAGGTGTGTGTGGATGACAGGGCCGGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000641.15 |
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| CDS-3UTR TCA 90 bp | AGGGCAAGGGTGAAAGTCACTGAGGCAAATCTTCTTGAACCTGCTTGTAATTTCCGAAGGTGCCACACGTaGGGAGGTGAGAGGCATTGG | + |
|
Preference number: 4 (lower is better) Translates to: RARVKVTEANLLEPACNFRRCHT*GGERHW Trigger: CCAATGCCTCTCACCTCCTCACGTGTGGCACCTTCG...GAAATTACAAGCAGGTTCAAGAAGATTTGCCTCAGTGACTTTCACCCTTGCCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000641.15 |
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| CDS-3UTR TCA 90 bp | CACACACACACACGCACGCACGCACACATGCCACACATGGACAGACATTTCTTTCAATCAGGAGGAGAGTaGGAGATGCTGCTAGAACAC | + |
|
Preference number: 4 (lower is better) Translates to: HTHTRTHAHMPHMDRHFFQSGGE*EMLLEH Trigger: GTGTTCTAGCAGCATCTCTCACTCTCCTCCTGATTG...AAAGAAATGTCTGTCCATGTGTGGCATGTGTGCGTGCGTGCGTGTGTGTGTGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000641.15 |
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| CDS-3UTR CCA 90 bp | AGCAGGCCAGGGAGGAACTGCCTCACAGCAACACCTCCTCCATTTATGTGGCCCAGTCTTTCAACCTGCTaGAAACTGGACACATCAATA | + |
|
Preference number: 4 (lower is better) Translates to: SRPGRNCLTATPPPFMWPSLSTC*KLDTSI Trigger: TATTGATGTGTCCAGTTTCCAGCAGGTTGAAAGACT...GGGCCACATAAATGGAGGAGGTGTTGCTGTGAGGCAGTTCCTCCCTGGCCTGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000641.15 |
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| CDS-3UTR CCA 90 bp | GATGAAAGCCATCACACACACACACACACACACACACACACACACACACACACGCTGTCCATGAGCGGGTaGTCTCTGATAAAGGTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: DESHHTHTHTHTHTHTHTLSMSG*SLIKVS Trigger: GCTCACCTTTATCAGAGACCACCCGCTCATGGACAG...CGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGATGGCTTTCATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000641.15 |
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| CDS-3UTR CCA 90 bp | GATGAAAGCCATCACACACACACACACACACACACACACACACACACACACACGGACGGCCACAGTTGCTaGTGTTCACTTGTGTCACCT | + |
|
Preference number: 4 (lower is better) Translates to: DESHHTHTHTHTHTHTHTDGHSC*CSLVSP Trigger: AGGTGACACAAGTGAACACCAGCAACTGTGGCCGTC...CGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGATGGCTTTCATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000641.15 |
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| CDS-3UTR CCA 90 bp | AGGGCAAGGGTGAAAGTCACTGAGGCAAATCTTCTTGAACCTGCTTGTAATTTCGGAAGTTTTTCACAGTaGCGGTGTAGAGGACGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: RARVKVTEANLLEPACNFGSFSQ*RCRGRP Trigger: GGGGCGTCCTCTACACCGCCACTGTGAAAAACTTCC...GAAATTACAAGCAGGTTCAAGAAGATTTGCCTCAGTGACTTTCACCCTTGCCCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000000641.15 |
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| CDS-3UTR GCA 90 bp | TCATCCACACACACCTGGACAGGTCTTCGAGGCACACCAGTGTATAGACACACAAGTGAGGATCCAAACTaGTGGAACTTCATGTTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: SSTHTWTGLRGTPVYRHTSEDPN*WNFMLL Trigger: CAACAACATGAAGTTCCAGCAGTTTGGATCCTCACT...TGTGTGTCTATACACTGGTGTGCCTCGAAGACCTGTCCAGGTGTGTGTGGATGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000641.15 |
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| CDS-3UTR GCA 90 bp | GATGAAAGCCATCACACACACACACACACACACACACACACACACACACACACGCATGGTACAATTTCATaGTTTCAACCGGCTGTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: DESHHTHTHTHTHTHTHTHGTIS*FQPAVF Trigger: AAACACAGCCGGTTGAAAGCATGAAATTGTACCATG...CGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGATGGCTTTCATC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000641.15 |
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| CDS-3UTR CCA 90 bp | CACACACACACACGCACGCACGCACACATGCCACACATGGACAGACATTTCTTTACCAGAAGCCAATCATaGTACAATTTCATGCTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: HTHTRTHAHMPHMDRHFFTRSQS*YNFMLS Trigger: TGAAAGCATGAAATTGTACCATGATTGGCTTCTGGT...AAAGAAATGTCTGTCCATGTGTGGCATGTGTGCGTGCGTGCGTGTGTGTGTGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000641.15 |
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| CDS GCA 90 bp | CAGCCCCCACAACGGTGTGGGCCCGGTTTGCGGGCCCCCTCTGGCTaGCCCACACCAAGCTATAAGCAGCCACCACACGGGCGGCTCCAC | + |
|
Preference number: 5 (lower is better) Translates to: QPPQRCGPGLRAPSG*PTPSYKQPPHGRLH Trigger: GTGGAGCCGCCCGTGTGGTGGCTGCTTATAGCTTGGTGTGGGGCAGCCAGAGGGGGCCCGCAAACCGGGCCCACACCGTTGTGGGGGCTG 70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000000641.15 |
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| CDS GCA 90 bp | TGGGGTGAGCGAAGTCACTCCACTGGGCTGGTGCCACACACAGGATaGCCAGGCAGAACTGGGGGAGCACGGCAGGACCACGTGGCCCAC | + |
|
Preference number: 5 (lower is better) Translates to: WGERSHSTGLVPHTG*PGRTGGARQDHVAH Trigger: GTGGGCCACGTGGTCCTGCCGTGCTCCCCCAGTTCTGCCTGGGCATCCTGTGTGTGGCACCAGCCCAGTGGAGTGACTTCGCTCACCCCA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000000641.15 |
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| CDS CCA 90 bp | CTCATCGCACGTGGCCAGAGGAGCCCCAGTGAGCCGGATGTGGGCTaGGCTCGGGCAAGAATCCAGCAGGAAGGGTGGAGGGAAGCCACC | + |
|
Preference number: 5 (lower is better) Translates to: LIARGQRSPSEPDVG*ARARIQQEGWREAT Trigger: GGTGGCTTCCCTCCACCCTTCCTGCTGGATTCTTGCCCGAGCCCAGCCCACATCCGGCTCACTGGGGCTCCTCTGGCCACGTGCGATGAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000641.15 |
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| CDS GCA 90 bp | AGCCCATCCCTTCGTGGGGTGAGCGAAGTCACTCCACTGGGCTGGTaGCACACACAGGATGCCCAGGCAGAACTGGGGGAGCACGGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: SPSLRGVSEVTPLGW*HTQDAQAELGEHGR Trigger: CCTGCCGTGCTCCCCCAGTTCTGCCTGGGCATCCTGTGTGTGGCACCAGCCCAGTGGAGTGACTTCGCTCACCCCACGAAGGGATGGGCT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000000641.15 |
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| CDS CCA 90 bp | GAGCCGGATGTGGGCTGGGCTCGGGCAAGAATCCAGCAGGAAGGGTaGAGGGAAGCCACCAAAACCACTGCCCCGCTTACCCAGGGCCAG | + |
|
Preference number: 5 (lower is better) Translates to: EPDVGWARARIQQEG*REATKTTAPLTQGQ Trigger: CTGGCCCTGGGTAAGCGGGGCAGTGGTTTTGGTGGCTTCCCTCCACCCTTCCTGCTGGATTCTTGCCCGAGCCCAGCCCACATCCGGCTC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000641.15 |
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| CDS CCA 90 bp | GACGTCTCATCGCACGTGGCCAGAGGAGCCCCAGTGAGCCGGATGTaGGCTGGGCTCGGGCAAGAATCCAGCAGGAAGGGTGGAGGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: DVSSHVARGAPVSRM*AGLGQESSRKGGGK Trigger: CTTCCCTCCACCCTTCCTGCTGGATTCTTGCCCGAGCCCAGCCCACATCCGGCTCACTGGGGCTCCTCTGGCCACGTGCGATGAGACGTC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000641.15 |
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| CDS CCA 90 bp | TCTAGCCCATCCCTTCGTGGGGTGAGCGAAGTCACTCCACTGGGCTaGTGCCACACACAGGATGCCCAGGCAGAACTGGGGGAGCACGGC | + |
|
Preference number: 5 (lower is better) Translates to: SSPSLRGVSEVTPLG*CHTQDAQAELGEHG Trigger: GCCGTGCTCCCCCAGTTCTGCCTGGGCATCCTGTGTGTGGCACCAGCCCAGTGGAGTGACTTCGCTCACCCCACGAAGGGATGGGCTAGA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000000641.15 |
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| CDS TCA 90 bp | GGCTGTGTTTCCGGGAACAAGGCCAGATCCTCCAGGACACTGAGCTaGGCTCCGATGCGCACAGCCCGATGGAGGTGCCCATCCTCTGTC | + |
|
Preference number: 5 (lower is better) Translates to: GCVSGNKARSSRTLS*APMRTARWRCPSSV Trigger: GACAGAGGATGGGCACCTCCATCGGGCTGTGCGCATCGGAGCTCAGCTCAGTGTCCTGGAGGATCTGGCCTTGTTCCCGGAAACACAGCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000641.15 |
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| CDS TCA 90 bp | CAACCGGCTGTGTTTCCGGGAACAAGGCCAGATCCTCCAGGACACTaGGCTGAGCTCCGATGCGCACAGCCCGATGGAGGTGCCCATCCT | + |
|
Preference number: 5 (lower is better) Translates to: QPAVFPGTRPDPPGH*AELRCAQPDGGAHP Trigger: AGGATGGGCACCTCCATCGGGCTGTGCGCATCGGAGCTCAGCTCAGTGTCCTGGAGGATCTGGCCTTGTTCCCGGAAACACAGCCGGTTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000641.15 |
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| CDS GCA 90 bp | GGCAAGAATCCAGCAGGAAGGGTGGAGGGAAGCCACCAAAACCACTaGCCCGCTTACCCAGGGCCAGGGGCAGCCGTTCATCTTCAGGTG | + |
|
Preference number: 5 (lower is better) Translates to: GKNPAGRVEGSHQNH*PAYPGPGAAVHLQV Trigger: CACCTGAAGATGAACGGCTGCCCCTGGCCCTGGGTAAGCGGGGCAGTGGTTTTGGTGGCTTCCCTCCACCCTTCCTGCTGGATTCTTGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000641.15 |
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| CDS CCA 90 bp | AGGGGGCGGCCATCAGCTGGAAACACGGGCCTGTCCATGAGCGGGTaGTCTCTGATAAAGGTGAGCACACGGTCTGGCAGGGAGAGTGAG | + |
|
Preference number: 5 (lower is better) Translates to: RGRPSAGNTGLSMSG*SLIKVSTRSGRESE Trigger: CTCACTCTCCCTGCCAGACCGTGTGCTCACCTTTATCAGAGACCACCCGCTCATGGACAGGCCCGTGTTTCCAGCTGATGGCCGCCCCCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000000641.15 |
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| CDS TCA 90 bp | ACTGCCCCGCTTACCCAGGGCCAGGGGCAGCCGTTCATCTTCAGGTaGAGGAGAGGGAGGGTCTTGGCTATAGCTTGTGGTCCCAGAAGG | + |
|
Preference number: 5 (lower is better) Translates to: TAPLTQGQGQPFIFR*RRGRVLAIACGPRR Trigger: CCTTCTGGGACCACAAGCTATAGCCAAGACCCTCCCTCTCCTTCACCTGAAGATGAACGGCTGCCCCTGGCCCTGGGTAAGCGGGGCAGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000641.15 |
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| CDS CCA 90 bp | GCCACACAAGCATCGAGCCGGAAGCTCCAGGCACACACGGGATCCTaGGCCAGGATACATTCTGAGCAGCTCTGGAGACGGCCACAGTTG | + |
|
Preference number: 5 (lower is better) Translates to: ATQASSRKLQAHTGS*ARIHSEQLWRRPQL Trigger: CAACTGTGGCCGTCTCCAGAGCTGCTCAGAATGTATCCTGGCCCAGGATCCCGTGTGTGCCTGGAGCTTCCGGCTCGATGCTTGTGTGGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000641.15 |
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| CDS-3UTR CAA 90 bp | CCTAGCTTCACTAGCTTCCGAGGAGGACTGGAGAGAGGTGGGATCTCCAGCAGCGGCTGGGGCACCTCGTaGTCCATGACAGGTAGTCCC | + |
|
Preference number: 5 (lower is better) Translates to: PSFTSFRGGLERGGISSSGWGTS*SMTGSP Trigger: GGGACTACCTGTCATGGACAACGAGGTGCCCCAGCC...GCTGCTGGAGATCCCACCTCTCTCCAGTCCTCCTCGGAAGCTAGTGAAGCTAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000641.15 |
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| CDS GCA 90 bp | GGTCGAAGCTCTGTCATATCCTGCAGAACCCCCGAGGCCCTTCCATaGTCGGGCCCTGGACACAGCAGGTCAGCCTTTAGAAACGTCGTC | + |
|
Preference number: 5 (lower is better) Translates to: GRSSVISCRTPEALP*SGPGHSRSAFRNVV Trigger: GACGACGTTTCTAAAGGCTGACCTGCTGTGTCCAGGGCCCGAGCATGGAAGGGCCTCGGGGGTTCTGCAGGATATGACAGAGCTTCGACC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000000641.15 |
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| CDS CCA 90 bp | ACACAGGATGCCCAGGCAGAACTGGGGGAGCACGGCAGGACCACGTaGCCCACCGTAGCCACTGGAACTTCAAACACTACCGGATGTTCT | + |
|
Preference number: 5 (lower is better) Translates to: TQDAQAELGEHGRTT*PTVATGTSNTTGCS Trigger: AGAACATCCGGTAGTGTTTGAAGTTCCAGTGGCTACGGTGGGCCACGTGGTCCTGCCGTGCTCCCCCAGTTCTGCCTGGGCATCCTGTGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000000641.15 |
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| CDS TCA 90 bp | CCGGAAGCTCCAGGCACACACGGGATCCTGGGCCAGGATACATTCTaGGCAGCTCTGGAGACGGCCACAGTTGCTGGTGTTCACTTGTGT | + |
|
Preference number: 5 (lower is better) Translates to: PEAPGTHGILGQDTF*AALETATVAGVHLC Trigger: ACACAAGTGAACACCAGCAACTGTGGCCGTCTCCAGAGCTGCTCAGAATGTATCCTGGCCCAGGATCCCGTGTGTGCCTGGAGCTTCCGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000641.15 |
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| CDS CCA 90 bp | GAGATAGGCTGTATCCGTAGTGACCAGCAGGGGGCGGCCATCAGCTaGAAACACGGGCCTGTCCATGAGCGGGTGGTCTCTGATAAAGGT | + |
|
Preference number: 5 (lower is better) Translates to: EIGCIRSDQQGAAIS*KHGPVHERVVSDKG Trigger: ACCTTTATCAGAGACCACCCGCTCATGGACAGGCCCGTGTTTCCAGCTGATGGCCGCCCCCTGCTGGTCACTACGGATACAGCCTATCTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000000641.15 |
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| CDS-3UTR CAA 90 bp | CCTAGCTTCACTAGCTTCCGAGGAGGACTGGAGAGAGGTGGGATCTCCAGCAGCAGGAGAGGGAGGGTCTaGGCTATAGCTTGTGGTCCC | + |
|
Preference number: 5 (lower is better) Translates to: PSFTSFRGGLERGGISSSRRGRV*AIACGP Trigger: GGGACCACAAGCTATAGCCAAGACCCTCCCTCTCCT...GCTGCTGGAGATCCCACCTCTCTCCAGTCCTCCTCGGAAGCTAGTGAAGCTAGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000641.15 |
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| CDS CCA 90 bp | GGGCCAGGATACATTCTGAGCAGCTCTGGAGACGGCCACAGTTGCTaGTGTTCACTTGTGTCACCTCAGTATGGGAGCCCACCAGAAGCC | + |
|
Preference number: 5 (lower is better) Translates to: GPGYILSSSGDGHSC*CSLVSPQYGSPPEA Trigger: GGCTTCTGGTGGGCTCCCATACTGAGGTGACACAAGTGAACACCAGCAACTGTGGCCGTCTCCAGAGCTGCTCAGAATGTATCCTGGCCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000641.15 |
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| CDS-3UTR CAA 90 bp | GGGATGGACGAGGCACATTCACAGGCCAAGAGCAGGACGGAGCAGATGCAGCGCGTTGCTGGTGTTCACTaGTGTCACCTCAGTATGGGA | + |
|
Preference number: 5 (lower is better) Translates to: GMDEAHSQAKSRTEQMQRVAGVH*CHLSMG Trigger: TCCCATACTGAGGTGACACAAGTGAACACCAGCAAC...GCGCTGCATCTGCTCCGTCCTGCTCTTGGCCTGTGAATGTGCCTCGTCCATCCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000641.15 |
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| CDS GCA 90 bp | CCTGGGCCAGGATACATTCTGAGCAGCTCTGGAGACGGCCACAGTTaGTGGTGTTCACTTGTGTCACCTCAGTATGGGAGCCCACCAGAA | + |
|
Preference number: 5 (lower is better) Translates to: PGPGYILSSSGDGHS*WCSLVSPQYGSPPE Trigger: TTCTGGTGGGCTCCCATACTGAGGTGACACAAGTGAACACCAGCAACTGTGGCCGTCTCCAGAGCTGCTCAGAATGTATCCTGGCCCAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000641.15 |
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| CDS CCA 90 bp | CAGGCACACACGGGATCCTGGGCCAGGATACATTCTGAGCAGCTCTaGAGACGGCCACAGTTGCTGGTGTTCACTTGTGTCACCTCAGTA | + |
|
Preference number: 5 (lower is better) Translates to: QAHTGSWARIHSEQL*RRPQLLVFTCVTSV Trigger: TACTGAGGTGACACAAGTGAACACCAGCAACTGTGGCCGTCTCCAGAGCTGCTCAGAATGTATCCTGGCCCAGGATCCCGTGTGTGCCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000641.15 |
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| CDS CCA 90 bp | AGAACTGGGGGAGCACGGCAGGACCACGTGGCCCACCGTAGCCACTaGAACTTCAAACACTACCGGATGTTCTCCAGGTTCTTTTGGACA | + |
|
Preference number: 5 (lower is better) Translates to: RTGGARQDHVAHRSH*NFKHYRMFSRFFWT Trigger: TGTCCAAAAGAACCTGGAGAACATCCGGTAGTGTTTGAAGTTCCAGTGGCTACGGTGGGCCACGTGGTCCTGCCGTGCTCCCCCAGTTCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000000641.15 |
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| CDS-3UTR CAA 90 bp | AGGTCCAGAGGACAGACACTGACGTGTGATCACACAGACTCCAAGAGAATGGAGCACTGCCCGGATGTCTaGGGGTCGGAAGGCACACAC | + |
|
Preference number: 5 (lower is better) Translates to: RSRGQTLTCDHTDSKRMEHCPDV*GSEGTH Trigger: GTGTGTGCCTTCCGACCCCAAGACATCCGGGCAGTG...CTCCATTCTCTTGGAGTCTGTGTGATCACACGTCAGTGTCTGTCCTCTGGACCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000641.15 |
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| CDS TCA 90 bp | GTGCCCATCCTCTGTCCCCAGGTAGAGCACATCATATTCTTTCCCTaGGAGGCTGGTCACCCGGTGAGCCACAACTCTGAGATAGGCTGT | + |
|
Preference number: 5 (lower is better) Translates to: VPILCPQVEHIIFFP*EAGHPVSHNSEIGC Trigger: ACAGCCTATCTCAGAGTTGTGGCTCACCGGGTGACCAGCCTCTCAGGGAAAGAATATGATGTGCTCTACCTGGGGACAGAGGATGGGCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000641.15 |
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| CDS CCA 90 bp | TGTTTTAGCTCTCTAAAGGGACCATTCAGCACTGCCCGGATGTCTTaGGGTCGGAAGGCACACACAGCAGAAATGGCGGCTCCTTCCCAC | + |
|
Preference number: 5 (lower is better) Translates to: CFSSLKGPFSTARMS*GRKAHTAEMAAPSH Trigger: GTGGGAAGGAGCCGCCATTTCTGCTGTGTGTGCCTTCCGACCCCAAGACATCCGGGCAGTGCTGAATGGTCCCTTTAGAGAGCTAAAACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000641.15 |
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| CDS CCA 90 bp | AAGGTGAGCACACGGTCTGGCAGGGAGAGTGAGGATCCAAACTGCTaGAACTTCATGTTGTTGGTGATGCACTCTCCAGGTCTGGGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: KVSTRSGRESEDPNC*NFMLLVMHSPGLGW Trigger: CCAGCCCAGACCTGGAGAGTGCATCACCAACAACATGAAGTTCCAGCAGTTTGGATCCTCACTCTCCCTGCCAGACCGTGTGCTCACCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000641.15 |
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| CDS CCA 90 bp | GTTCATCTTCAGGTGAAGGAGAGGGAGGGTCTTGGCTATAGCTTGTaGTCCCAGAAGGTGGAGCCCCCAGATCTAAGCCCACCTTGTCTC | + |
|
Preference number: 5 (lower is better) Translates to: VHLQVKEREGLGYSL*SQKVEPPDLSPPCL Trigger: GAGACAAGGTGGGCTTAGATCTGGGGGCTCCACCTTCTGGGACCACAAGCTATAGCCAAGACCCTCCCTCTCCTTCACCTGAAGATGAAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000000641.15 |
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| CDS-3UTR CAA 90 bp | AGCAGGCCAGGGAGGAACTGCCTCACAGCAACACCTCCTCCATTTATGTGGCCCTGGAACTTCATGTTGTaGGTGATGCACTCTCCAGGT | + |
|
Preference number: 5 (lower is better) Translates to: SRPGRNCLTATPPPFMWPWNFML*VMHSPG Trigger: ACCTGGAGAGTGCATCACCAACAACATGAAGTTCCA...GGGCCACATAAATGGAGGAGGTGTTGCTGTGAGGCAGTTCCTCCCTGGCCTGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000641.15 |
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| CDS-3UTR CAA 90 bp | CCTAGCTTCACTAGCTTCCGAGGAGGACTGGAGAGAGGTGGGATCTCCAGCAGCTGCTGGAACTTCATGTaGTTGGTGATGCACTCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: PSFTSFRGGLERGGISSSCWNFM*LVMHSP Trigger: TGGAGAGTGCATCACCAACAACATGAAGTTCCAGCA...GCTGCTGGAGATCCCACCTCTCTCCAGTCCTCCTCGGAAGCTAGTGAAGCTAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000641.15 |
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| CDS TCA 90 bp | CGGGTGGTCTCTGATAAAGGTGAGCACACGGTCTGGCAGGGAGAGTaGGGATCCAAACTGCTGGAACTTCATGTTGTTGGTGATGCACTC | + |
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Preference number: 5 (lower is better) Translates to: RVVSDKGEHTVWQGE*GSKLLELHVVGDAL Trigger: GAGTGCATCACCAACAACATGAAGTTCCAGCAGTTTGGATCCTCACTCTCCCTGCCAGACCGTGTGCTCACCTTTATCAGAGACCACCCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000641.15 |
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| CDS GCA 90 bp | ATAAAGGTGAGCACACGGTCTGGCAGGGAGAGTGAGGATCCAAACTaGTGGAACTTCATGTTGTTGGTGATGCACTCTCCAGGTCTGGGC | + |
|
Preference number: 5 (lower is better) Translates to: IKVSTRSGRESEDPN*WNFMLLVMHSPGLG Trigger: GCCCAGACCTGGAGAGTGCATCACCAACAACATGAAGTTCCAGCAGTTTGGATCCTCACTCTCCCTGCCAGACCGTGTGCTCACCTTTAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000641.15 |
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| CDS TCA 90 bp | CGGATGTTCTCCAGGTTCTTTTGGACACAAAGAAGAGACATCTGCTaGCTCTATGTCTTGAACCATCCCACGGTGCTCGCCTGCATGGGC | + |
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Preference number: 5 (lower is better) Translates to: RMFSRFFWTQRRDIC*LYVLNHPTVLACMG Trigger: GCCCATGCAGGCGAGCACCGTGGGATGGTTCAAGACATAGAGTCAGCAGATGTCTCTTCTTTGTGTCCAAAAGAACCTGGAGAACATCCG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000641.15 |
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| CDS GCA 90 bp | CCTCAGTATGGGAGCCCACCAGAAGCCAATCATGGTACAATTTCATaGTTTCAACCGGCTGTGTTTCCGGGAACAAGGCCAGATCCTCCA | + |
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Preference number: 5 (lower is better) Translates to: PQYGSPPEANHGTIS*FQPAVFPGTRPDPP Trigger: TGGAGGATCTGGCCTTGTTCCCGGAAACACAGCCGGTTGAAAGCATGAAATTGTACCATGATTGGCTTCTGGTGGGCTCCCATACTGAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000641.15 |
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| CDS-3UTR CAA 90 bp | GATGAAAGCCATCACACACACACACACACACACACACACACACACACACACACGTGGAGACGGCCACAGTaGCTGGTGTTCACTTGTGTC | + |
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Preference number: 5 (lower is better) Translates to: DESHHTHTHTHTHTHTHTWRRPQ*LVFTCV Trigger: GACACAAGTGAACACCAGCAACTGTGGCCGTCTCCA...CGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGATGGCTTTCATC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000641.15 |
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| CDS-3UTR CAA 90 bp | GATGAAAGCCATCACACACACACACACACACACACACACACACACACACACACGGGTCTTGGCTATAGCTaGTGGTCCCAGAAGGTGGAG | + |
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Preference number: 5 (lower is better) Translates to: DESHHTHTHTHTHTHTHTGLGYS*WSQKVE Trigger: CTCCACCTTCTGGGACCACAAGCTATAGCCAAGACC...CGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGATGGCTTTCATC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000641.15 |
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| CDS CCA 90 bp | TGGAGACGGCCACAGTTGCTGGTGTTCACTTGTGTCACCTCAGTATaGGAGCCCACCAGAAGCCAATCATGGTACAATTTCATGCTTTCA | + |
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Preference number: 5 (lower is better) Translates to: WRRPQLLVFTCVTSV*EPTRSQSWYNFMLS Trigger: TGAAAGCATGAAATTGTACCATGATTGGCTTCTGGTGGGCTCCCATACTGAGGTGACACAAGTGAACACCAGCAACTGTGGCCGTCTCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000641.15 |
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| CDS-3UTR CAA 90 bp | TCATCCACACACACCTGGACAGGTCTTCGAGGCACACCAGTGTATAGACACACAACAGGTAGTCCCCTGTaGCAGTCATGTTTTAGCTCT | + |
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Preference number: 5 (lower is better) Translates to: SSTHTWTGLRGTPVYRHTTGSPL*QSCFSS Trigger: AGAGCTAAAACATGACTGCAACAGGGGACTACCTGT...TGTGTGTCTATACACTGGTGTGCCTCGAAGACCTGTCCAGGTGTGTGTGGATGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000641.15 |
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| CDS CCA 72 bp | GATAGGAGTCAGCCTCGGAGATGGGCAGCGAGGTTCTaGGCACCGAGCGGGGGACGCGGCCGCACACCGGGG | + |
|
Preference number: 6 (lower is better) Translates to: DRSQPRRWAARF*APSGGRGRTPG Trigger: CCCCGGTGTGCGGCCGCGTCCCCCGCTCGGTGCCCAGAACCTCGCTGCCCATCTCCGAGGCTGACTCCTATC 72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000000641.15 |
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| CDS GCA 72 bp | CAACGGTGTGGGCCCGGTTTGCGGGCCCCCTCTGGCTaGCCCACACCAAGCTATAAGCAGCCACCACACGGG | + |
|
Preference number: 6 (lower is better) Translates to: QRCGPGLRAPSG*PTPSYKQPPHG Trigger: CCCGTGTGGTGGCTGCTTATAGCTTGGTGTGGGGCAGCCAGAGGGGGCCCGCAAACCGGGCCCACACCGTTG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000000641.15 |
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| CDS CCA 72 bp | CGTGGCCAGAGGAGCCCCAGTGAGCCGGATGTGGGCTaGGCTCGGGCAAGAATCCAGCAGGAAGGGTGGAGG | + |
|
Preference number: 6 (lower is better) Translates to: RGQRSPSEPDVG*ARARIQQEGWR Trigger: CCTCCACCCTTCCTGCTGGATTCTTGCCCGAGCCCAGCCCACATCCGGCTCACTGGGGCTCCTCTGGCCACG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000641.15 |
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| CDS CCA 72 bp | TCGCACGTGGCCAGAGGAGCCCCAGTGAGCCGGATGTaGGCTGGGCTCGGGCAAGAATCCAGCAGGAAGGGT | + |
|
Preference number: 6 (lower is better) Translates to: SHVARGAPVSRM*AGLGQESSRKG Trigger: ACCCTTCCTGCTGGATTCTTGCCCGAGCCCAGCCCACATCCGGCTCACTGGGGCTCCTCTGGCCACGTGCGA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000641.15 |
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| CDS GCA 72 bp | CGAAGTCACTCCACTGGGCTGGTGCCACACACAGGATaGCCAGGCAGAACTGGGGGAGCACGGCAGGACCAC | + |
|
Preference number: 6 (lower is better) Translates to: RSHSTGLVPHTG*PGRTGGARQDH Trigger: GTGGTCCTGCCGTGCTCCCCCAGTTCTGCCTGGGCATCCTGTGTGTGGCACCAGCCCAGTGGAGTGACTTCG 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000000641.15 |
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| CDS TCA 72 bp | TCCGGGAACAAGGCCAGATCCTCCAGGACACTGAGCTaGGCTCCGATGCGCACAGCCCGATGGAGGTGCCCA | + |
|
Preference number: 6 (lower is better) Translates to: SGNKARSSRTLS*APMRTARWRCP Trigger: TGGGCACCTCCATCGGGCTGTGCGCATCGGAGCTCAGCTCAGTGTCCTGGAGGATCTGGCCTTGTTCCCGGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000641.15 |
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| CDS CCA 72 bp | GCCCAGGCAGAACTGGGGGAGCACGGCAGGACCACGTaGCCCACCGTAGCCACTGGAACTTCAAACACTACC | + |
|
Preference number: 6 (lower is better) Translates to: AQAELGEHGRTT*PTVATGTSNTT Trigger: GGTAGTGTTTGAAGTTCCAGTGGCTACGGTGGGCCACGTGGTCCTGCCGTGCTCCCCCAGTTCTGCCTGGGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000000641.15 |
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| CDS CCA 72 bp | TCCCTTCGTGGGGTGAGCGAAGTCACTCCACTGGGCTaGTGCCACACACAGGATGCCCAGGCAGAACTGGGG | + |
|
Preference number: 6 (lower is better) Translates to: SLRGVSEVTPLG*CHTQDAQAELG Trigger: CCCCAGTTCTGCCTGGGCATCCTGTGTGTGGCACCAGCCCAGTGGAGTGACTTCGCTCACCCCACGAAGGGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000641.15 |
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| CDS CCA 72 bp | TGTATCCGTAGTGACCAGCAGGGGGCGGCCATCAGCTaGAAACACGGGCCTGTCCATGAGCGGGTGGTCTCT | + |
|
Preference number: 6 (lower is better) Translates to: CIRSDQQGAAIS*KHGPVHERVVS Trigger: AGAGACCACCCGCTCATGGACAGGCCCGTGTTTCCAGCTGATGGCCGCCCCCTGCTGGTCACTACGGATACA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000000641.15 |
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| CDS CCA 72 bp | GCATCGAGCCGGAAGCTCCAGGCACACACGGGATCCTaGGCCAGGATACATTCTGAGCAGCTCTGGAGACGG | + |
|
Preference number: 6 (lower is better) Translates to: ASSRKLQAHTGS*ARIHSEQLWRR Trigger: CCGTCTCCAGAGCTGCTCAGAATGTATCCTGGCCCAGGATCCCGTGTGTGCCTGGAGCTTCCGGCTCGATGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000641.15 |
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| CDS CAA 72 bp | GTCCCAGAAGGTGGAGCCCCCAGATCTAAGCCCACCTaGTCTCTAGCTAGAAGCTCCCTCTGTCGCCGCCGC | + |
|
Preference number: 6 (lower is better) Translates to: VPEGGAPRSKPT*SLARSSLCRRR Trigger: GCGGCGGCGACAGAGGGAGCTTCTAGCTAGAGACAAGGTGGGCTTAGATCTGGGGGCTCCACCTTCTGGGAC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000000641.15 |
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| CDS TCA 72 bp | GTGTTTCCGGGAACAAGGCCAGATCCTCCAGGACACTaGGCTGAGCTCCGATGCGCACAGCCCGATGGAGGT | + |
|
Preference number: 6 (lower is better) Translates to: VFPGTRPDPPGH*AELRCAQPDGG Trigger: ACCTCCATCGGGCTGTGCGCATCGGAGCTCAGCTCAGTGTCCTGGAGGATCTGGCCTTGTTCCCGGAAACAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000641.15 |
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| CDS TCA 72 bp | TCTCTAGCTAGAAGCTCCCTCTGTCGCCGCCGCTGCTaGCGGCGACCAATCAGGAGGAGAGTGAGAGATGCT | + |
|
Preference number: 6 (lower is better) Translates to: SLARSSLCRRRC*RRPIRRRVRDA Trigger: AGCATCTCTCACTCTCCTCCTGATTGGTCGCCGTCAGCAGCGGCGGCGACAGAGGGAGCTTCTAGCTAGAGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000641.15 |
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| CDS CCA 72 bp | CCATCAGCTGGAAACACGGGCCTGTCCATGAGCGGGTaGTCTCTGATAAAGGTGAGCACACGGTCTGGCAGG | + |
|
Preference number: 6 (lower is better) Translates to: PSAGNTGLSMSG*SLIKVSTRSGR Trigger: CCTGCCAGACCGTGTGCTCACCTTTATCAGAGACCACCCGCTCATGGACAGGCCCGTGTTTCCAGCTGATGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000641.15 |
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| CDS CCA 72 bp | GGAGCACGGCAGGACCACGTGGCCCACCGTAGCCACTaGAACTTCAAACACTACCGGATGTTCTCCAGGTTC | + |
|
Preference number: 6 (lower is better) Translates to: GARQDHVAHRSH*NFKHYRMFSRF Trigger: GAACCTGGAGAACATCCGGTAGTGTTTGAAGTTCCAGTGGCTACGGTGGGCCACGTGGTCCTGCCGTGCTCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000641.15 |
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| CDS TCA 72 bp | CTTACCCAGGGCCAGGGGCAGCCGTTCATCTTCAGGTaGAGGAGAGGGAGGGTCTTGGCTATAGCTTGTGGT | + |
|
Preference number: 6 (lower is better) Translates to: LTQGQGQPFIFR*RRGRVLAIACG Trigger: ACCACAAGCTATAGCCAAGACCCTCCCTCTCCTTCACCTGAAGATGAACGGCTGCCCCTGGCCCTGGGTAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000641.15 |
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| CDS CAA 72 bp | CTCTCTAAAGGGACCATTCAGCACTGCCCGGATGTCTaGGGGTCGGAAGGCACACACAGCAGAAATGGCGGC | + |
|
Preference number: 6 (lower is better) Translates to: LSKGTIQHCPDV*GSEGTHSRNGG Trigger: GCCGCCATTTCTGCTGTGTGTGCCTTCCGACCCCAAGACATCCGGGCAGTGCTGAATGGTCCCTTTAGAGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000641.15 |
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| CDS CAA 72 bp | GTGATGCACTCTCCAGGTCTGGGCTGGGGCACCTCGTaGTCCATGACAGGTAGTCCCCTGTTGCAGTCATGT | + |
|
Preference number: 6 (lower is better) Translates to: VMHSPGLGWGTS*SMTGSPLLQSC Trigger: ACATGACTGCAACAGGGGACTACCTGTCATGGACAACGAGGTGCCCCAGCCCAGACCTGGAGAGTGCATCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000641.15 |
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| CDS CAA 90 bp | TCCTGGGCCAGGATACATTCTGAGCAGCTCTGGAGACGGCCACAGTaGCTGGTGTTCACTTGTGTCACCTCAGTATGGGAGCCCACCAGA | + |
|
Preference number: 6 (lower is better) Translates to: SWARIHSEQLWRRPQ*LVFTCVTSVWEPTR Trigger: TCTGGTGGGCTCCCATACTGAGGTGACACAAGTGAACACCAGCAACTGTGGCCGTCTCCAGAGCTGCTCAGAATGTATCCTGGCCCAGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000641.15 |
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| CDS TCA 72 bp | CCCCGCACTTCGGATCAAAAGCGAAGGTGCCACACGTaGGGAGGTGAGAGGCATTGGCAATGGCGAGAATCT | + |
|
Preference number: 6 (lower is better) Translates to: PRTSDQKRRCHT*GGERHWQWRES Trigger: AGATTCTCGCCATTGCCAATGCCTCTCACCTCCTCACGTGTGGCACCTTCGCTTTTGATCCGAAGTGCGGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000641.15 |
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| CDS CCA 72 bp | GGATGTCTTGGGGTCGGAAGGCACACACAGCAGAAATaGCGGCTCCTTCCCACTGGGAGGAAAAGATGCCAT | + |
|
Preference number: 6 (lower is better) Translates to: GCLGVGRHTQQK*RLLPTGRKRCH Trigger: ATGGCATCTTTTCCTCCCAGTGGGAAGGAGCCGCCATTTCTGCTGTGTGTGCCTTCCGACCCCAAGACATCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000641.15 |
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| CDS CCA 72 bp | TCTCTAAAGGGACCATTCAGCACTGCCCGGATGTCTTaGGGTCGGAAGGCACACACAGCAGAAATGGCGGCT | + |
|
Preference number: 6 (lower is better) Translates to: SLKGPFSTARMS*GRKAHTAEMAA Trigger: AGCCGCCATTTCTGCTGTGTGTGCCTTCCGACCCCAAGACATCCGGGCAGTGCTGAATGGTCCCTTTAGAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000641.15 |
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| CDS CCA 72 bp | TTCATGTTGTTGGTGATGCACTCTCCAGGTCTGGGCTaGGGCACCTCGTTGTCCATGACAGGTAGTCCCCTG | + |
|
Preference number: 6 (lower is better) Translates to: FMLLVMHSPGLG*GTSLSMTGSPL Trigger: CAGGGGACTACCTGTCATGGACAACGAGGTGCCCCAGCCCAGACCTGGAGAGTGCATCACCAACAACATGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000641.15 |
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| CDS CCA 72 bp | ACGGGATCCTGGGCCAGGATACATTCTGAGCAGCTCTaGAGACGGCCACAGTTGCTGGTGTTCACTTGTGTC | + |
|
Preference number: 6 (lower is better) Translates to: TGSWARIHSEQL*RRPQLLVFTCV Trigger: GACACAAGTGAACACCAGCAACTGTGGCCGTCTCCAGAGCTGCTCAGAATGTATCCTGGCCCAGGATCCCGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000641.15 |
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| CDS TCA 72 bp | CTCTGTCCCCAGGTAGAGCACATCATATTCTTTCCCTaGGAGGCTGGTCACCCGGTGAGCCACAACTCTGAG | + |
|
Preference number: 6 (lower is better) Translates to: LCPQVEHIIFFP*EAGHPVSHNSE Trigger: CTCAGAGTTGTGGCTCACCGGGTGACCAGCCTCTCAGGGAAAGAATATGATGTGCTCTACCTGGGGACAGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000641.15 |
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| CDS CAA 72 bp | GAGAGTGAGGATCCAAACTGCTGGAACTTCATGTTGTaGGTGATGCACTCTCCAGGTCTGGGCTGGGGCACC | + |
|
Preference number: 6 (lower is better) Translates to: ESEDPNCWNFML*VMHSPGLGWGT Trigger: GGTGCCCCAGCCCAGACCTGGAGAGTGCATCACCAACAACATGAAGTTCCAGCAGTTTGGATCCTCACTCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000641.15 |
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| CDS GCA 72 bp | GGATACATTCTGAGCAGCTCTGGAGACGGCCACAGTTaGTGGTGTTCACTTGTGTCACCTCAGTATGGGAGC | + |
|
Preference number: 6 (lower is better) Translates to: GYILSSSGDGHS*WCSLVSPQYGS Trigger: GCTCCCATACTGAGGTGACACAAGTGAACACCAGCAACTGTGGCCGTCTCCAGAGCTGCTCAGAATGTATCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000641.15 |
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| CDS CCA 72 bp | TACATTCTGAGCAGCTCTGGAGACGGCCACAGTTGCTaGTGTTCACTTGTGTCACCTCAGTATGGGAGCCCA | + |
|
Preference number: 6 (lower is better) Translates to: YILSSSGDGHSC*CSLVSPQYGSP Trigger: TGGGCTCCCATACTGAGGTGACACAAGTGAACACCAGCAACTGTGGCCGTCTCCAGAGCTGCTCAGAATGTA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000641.15 |
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| CDS GCA 72 bp | GGACATTTCCCCCGGCCACTCTCAAGTCTTTCAACCTaGTGGAAACTGGACACATCAATAACCCCGCACTTC | + |
|
Preference number: 6 (lower is better) Translates to: GHFPRPLSSLST*WKLDTSITPHF Trigger: GAAGTGCGGGGTTATTGATGTGTCCAGTTTCCAGCAGGTTGAAAGACTTGAGAGTGGCCGGGGGAAATGTCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000000641.15 |
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| CDS GCA 72 bp | AGCACACGGTCTGGCAGGGAGAGTGAGGATCCAAACTaGTGGAACTTCATGTTGTTGGTGATGCACTCTCCA | + |
|
Preference number: 6 (lower is better) Translates to: STRSGRESEDPN*WNFMLLVMHSP Trigger: TGGAGAGTGCATCACCAACAACATGAAGTTCCAGCAGTTTGGATCCTCACTCTCCCTGCCAGACCGTGTGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000641.15 |
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| CDS GCA 72 bp | GGGAGCCCACCAGAAGCCAATCATGGTACAATTTCATaGTTTCAACCGGCTGTGTTTCCGGGAACAAGGCCA | + |
|
Preference number: 6 (lower is better) Translates to: GSPPEANHGTIS*FQPAVFPGTRP Trigger: TGGCCTTGTTCCCGGAAACACAGCCGGTTGAAAGCATGAAATTGTACCATGATTGGCTTCTGGTGGGCTCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000641.15 |
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| CDS CCA 72 bp | CATTTCCCCCGGCCACTCTCAAGTCTTTCAACCTGCTaGAAACTGGACACATCAATAACCCCGCACTTCGGA | + |
|
Preference number: 6 (lower is better) Translates to: HFPRPLSSLSTC*KLDTSITPHFG Trigger: TCCGAAGTGCGGGGTTATTGATGTGTCCAGTTTCCAGCAGGTTGAAAGACTTGAGAGTGGCCGGGGGAAATG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000000641.15 |
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| CDS CCA 72 bp | ACACGGTCTGGCAGGGAGAGTGAGGATCCAAACTGCTaGAACTTCATGTTGTTGGTGATGCACTCTCCAGGT | + |
|
Preference number: 6 (lower is better) Translates to: TRSGRESEDPNC*NFMLLVMHSPG Trigger: ACCTGGAGAGTGCATCACCAACAACATGAAGTTCCAGCAGTTTGGATCCTCACTCTCCCTGCCAGACCGTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000641.15 |
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| CDS CAA 72 bp | AGGATACATTCTGAGCAGCTCTGGAGACGGCCACAGTaGCTGGTGTTCACTTGTGTCACCTCAGTATGGGAG | + |
|
Preference number: 6 (lower is better) Translates to: RIHSEQLWRRPQ*LVFTCVTSVWE Trigger: CTCCCATACTGAGGTGACACAAGTGAACACCAGCAACTGTGGCCGTCTCCAGAGCTGCTCAGAATGTATCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000641.15 |
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| CDS TCA 72 bp | TTCGGATCAAAAGCGAAGGTGCCACACGTGAGGAGGTaGGAGGCATTGGCAATGGCGAGAATCTGGATAAAA | + |
|
Preference number: 6 (lower is better) Translates to: FGSKAKVPHVRR*EALAMARIWIK Trigger: TTTTATCCAGATTCTCGCCATTGCCAATGCCTCTCACCTCCTCACGTGTGGCACCTTCGCTTTTGATCCGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000641.15 |
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| CDS TCA 72 bp | TCTGATAAAGGTGAGCACACGGTCTGGCAGGGAGAGTaGGGATCCAAACTGCTGGAACTTCATGTTGTTGGT | + |
|
Preference number: 6 (lower is better) Translates to: SDKGEHTVWQGE*GSKLLELHVVG Trigger: ACCAACAACATGAAGTTCCAGCAGTTTGGATCCTCACTCTCCCTGCCAGACCGTGTGCTCACCTTTATCAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000641.15 |
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| CDS CCA 72 bp | CCACAGTTGCTGGTGTTCACTTGTGTCACCTCAGTATaGGAGCCCACCAGAAGCCAATCATGGTACAATTTC | + |
|
Preference number: 6 (lower is better) Translates to: PQLLVFTCVTSV*EPTRSQSWYNF Trigger: GAAATTGTACCATGATTGGCTTCTGGTGGGCTCCCATACTGAGGTGACACAAGTGAACACCAGCAACTGTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000641.15 |
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