RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SEMA4C (Mus musculus)

Ensembl gene IDs: ENSMUSG00000026121

Ensembl transcript IDs: ENSMUST00000114991.8, ENSMUST00000191642.6, ENSMUST00000191677.6, ENSMUST00000195620.6

Found 319 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GTGGCAGTGCCCATGCTGAGCAGGTCCTCACGGCCGGGCAAATGCTaGGCAGTGTCTGTCCCAGGCAGAGCAAGTGCCCCTGCCATGTCC +
Preference number: 1 (lower is better)
Translates to: VAVPMLSRSSRPGKC*AVSVPGRASAPAMS
Trigger: GGACATGGCAGGGGCACTTGCTCTGCCTGGGACAGACACTGCCCAGCATTTGCCCGGCCGTGAGGACCTGCTCAGCATGGGCACTGCCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
3UTR GCA 90 bp CAAGTGGCAGTGCCCATGCTGAGCAGGTCCTCACGGCCGGGCAAATaGTGGGCAGTGTCTGTCCCAGGCAGAGCAAGTGCCCCTGCCATG +
Preference number: 1 (lower is better)
Translates to: QVAVPMLSRSSRPGK*WAVSVPGRASAPAM
Trigger: CATGGCAGGGGCACTTGCTCTGCCTGGGACAGACACTGCCCAGCATTTGCCCGGCCGTGAGGACCTGCTCAGCATGGGCACTGCCACTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
3UTR GCA 90 bp ACGGCCGGGCAAATGCTGGGCAGTGTCTGTCCCAGGCAGAGCAAGTaGCCCTGCCATGTCCCTGAGGTAGCTGGTGCCTGTGCAAAAGTT +
Preference number: 1 (lower is better)
Translates to: TAGQMLGSVCPRQSK*PCHVPEVAGACAKV
Trigger: AACTTTTGCACAGGCACCAGCTACCTCAGGGACATGGCAGGGGCACTTGCTCTGCCTGGGACAGACACTGCCCAGCATTTGCCCGGCCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
3UTR GCA 90 bp GGGCAAATGCTGGGCAGTGTCTGTCCCAGGCAGAGCAAGTGCCCCTaGCATGTCCCTGAGGTAGCTGGTGCCTGTGCAAAAGTTAAGAGT +
Preference number: 1 (lower is better)
Translates to: GQMLGSVCPRQSKCP*HVPEVAGACAKVKS
Trigger: ACTCTTAACTTTTGCACAGGCACCAGCTACCTCAGGGACATGGCAGGGGCACTTGCTCTGCCTGGGACAGACACTGCCCAGCATTTGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
3UTR GCA 90 bp CAAACACGCCCACATCTTGAAACCTCTTCCTTGCAAAGTTTTGGCTaGTGGGGTCCCACATGTCTCAAATTCACAGAGGAGGGTGTGTCT +
Preference number: 1 (lower is better)
Translates to: QTRPHLETSSLQSFG*WGPTCLKFTEEGVS
Trigger: AGACACACCCTCCTCTGTGAATTTGAGACATGTGGGACCCCAGCAGCCAAAACTTTGCAAGGAAGAGGTTTCAAGATGTGGGCGTGTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
3UTR GCA 90 bp AACACATATATGCACAAACACGCCCACATCTTGAAACCTCTTCCTTaGAAAGTTTTGGCTGCTGGGGTCCCACATGTCTCAAATTCACAG +
Preference number: 1 (lower is better)
Translates to: NTYMHKHAHILKPLP*KVLAAGVPHVSNSQ
Trigger: CTGTGAATTTGAGACATGTGGGACCCCAGCAGCCAAAACTTTGCAAGGAAGAGGTTTCAAGATGTGGGCGTGTTTGTGCATATATGTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
3UTR-3UTR TCA 90 bp GCAGGTCCTCACGGCCGGGCAAATGCTGGGCAGTGTCTGTCCCAGGCAGAGCAACCCCTGCCATGTCCCTaGGGTAGCTGGTGCCTGTGC +
Preference number: 2 (lower is better)
Translates to: AGPHGRANAGQCLSQAEQPLPCP*GSWCLC
Trigger: GCACAGGCACCAGCTACCTCAGGGACATGGCAGGGG...TTGCTCTGCCTGGGACAGACACTGCCCAGCATTTGCCCGGCCGTGAGGACCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
3UTR-3UTR TCA 90 bp TCAGAAGAGCGCAAATATAAAATACCACCGAACCCGGAGGGCAAGTGGGAGGCCTGGCAGTGCCCATGCTaGGCAGGTCCTCACGGCCGG +
Preference number: 2 (lower is better)
Translates to: SEERKYKIPPNPEGKWEAWQCPC*AGPHGR
Trigger: CCGGCCGTGAGGACCTGCTCAGCATGGGCACTGCCA...GGCCTCCCACTTGCCCTCCGGGTTCGGTGGTATTTTATATTTGCGCTCTTCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
3UTR-3UTR TCA 90 bp GTTTTGGCTGCTGGGGTCCCACATGTCTCAAATTCACAGAGGAGGGTGTGTCTCCCCCTGCCATGTCCCTaGGGTAGCTGGTGCCTGTGC +
Preference number: 2 (lower is better)
Translates to: VLAAGVPHVSNSQRRVCLPLPCP*GSWCLC
Trigger: GCACAGGCACCAGCTACCTCAGGGACATGGCAGGGG...GAGACACACCCTCCTCTGTGAATTTGAGACATGTGGGACCCCAGCAGCCAAAAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
3UTR-3UTR TCA 90 bp TCAGAAGAGCGCAAATATAAAATACCACCGAACCCGGAGGGCAAGTGGGAGGCCGCCCACCCCTCCCCCTaGAGCAGGAGGTTCCATCTC +
Preference number: 2 (lower is better)
Translates to: SEERKYKIPPNPEGKWEAAHPSP*SRRFHL
Trigger: GAGATGGAACCTCCTGCTTCAGGGGGAGGGGTGGGC...GGCCTCCCACTTGCCCTCCGGGTTCGGTGGTATTTTATATTTGCGCTCTTCTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
3UTR-3UTR CCA 90 bp GGTCCCACATGTCTCAAATTCACAGAGGAGGGTGTGTCTCCTGTGAGGCTGAAGCGGCCGGGCAAATGCTaGGCAGTGTCTGTCCCAGGC +
Preference number: 2 (lower is better)
Translates to: GPTCLKFTEEGVSPVRLKRPGKC*AVSVPG
Trigger: GCCTGGGACAGACACTGCCCAGCATTTGCCCGGCCG...CTTCAGCCTCACAGGAGACACACCCTCCTCTGTGAATTTGAGACATGTGGGACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
3UTR-3UTR TCA 90 bp TCCCACATGTCTCAAATTCACAGAGGAGGGTGTGTCTCCTGTGAGGCTGAAGTCCCCCTGCCATGTCCCTaGGGTAGCTGGTGCCTGTGC +
Preference number: 2 (lower is better)
Translates to: SHMSQIHRGGCVSCEAEVPLPCP*GSWCLC
Trigger: GCACAGGCACCAGCTACCTCAGGGACATGGCAGGGG...GACTTCAGCCTCACAGGAGACACACCCTCCTCTGTGAATTTGAGACATGTGGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
3UTR-3UTR GCA 90 bp TGTCCTTCCCTTCCCCGTATGTACATCACTGCCCCAAAGCTTGGGACAGCTGGGCAGAGCAAGTGCCCCTaGCATGTCCCTGAGGTAGCT +
Preference number: 2 (lower is better)
Translates to: CPSLPRMYITAPKLGTAGQSKCP*HVPEVA
Trigger: AGCTACCTCAGGGACATGGCAGGGGCACTTGCTCTG...CCCAGCTGTCCCAAGCTTTGGGGCAGTGATGTACATACGGGGAAGGGAAGGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
3UTR-3UTR TCA 90 bp TGGCTGCTGGGGTCCCACATGTCTCAAATTCACAGAGGAGGGTGTGTCTCCTGTAGGCTGAAGTCCTGGTaGGCCACACCAAGTGGCAGT +
Preference number: 2 (lower is better)
Translates to: WLLGSHMSQIHRGGCVSCRLKSW*ATPSGS
Trigger: ACTGCCACTTGGTGTGGCTCACCAGGACTTCAGCCT...ACAGGAGACACACCCTCCTCTGTGAATTTGAGACATGTGGGACCCCAGCAGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
3UTR-3UTR GCA 90 bp TCCCACATGTCTCAAATTCACAGAGGAGGGTGTGTCTCCTGTGAGGCTGAAGTCCCCAGGCAGAGCAAGTaGCCCTGCCATGTCCCTGAG +
Preference number: 2 (lower is better)
Translates to: SHMSQIHRGGCVSCEAEVPRQSK*PCHVPE
Trigger: CTCAGGGACATGGCAGGGGCACTTGCTCTGCCTGGG...GACTTCAGCCTCACAGGAGACACACCCTCCTCTGTGAATTTGAGACATGTGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
3UTR-3UTR TCA 90 bp GTTTTGGCTGCTGGGGTCCCACATGTCTCAAATTCACAGAGGAGGGTGTGTCTCAGGCTGAAGTCCTGGTaGGCCACACCAAGTGGCAGT +
Preference number: 2 (lower is better)
Translates to: VLAAGVPHVSNSQRRVCLRLKSW*ATPSGS
Trigger: ACTGCCACTTGGTGTGGCTCACCAGGACTTCAGCCT...GAGACACACCCTCCTCTGTGAATTTGAGACATGTGGGACCCCAGCAGCCAAAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
3UTR-3UTR TCA 90 bp AGAGACAGGAAAGTTACAACACACACACACACACACACACATTCTTCCACATGCTGGCAGTGCCCATGCTaGGCAGGTCCTCACGGCCGG +
Preference number: 2 (lower is better)
Translates to: RDRKVTTHTHTHTHSSTCWQCPC*AGPHGR
Trigger: CCGGCCGTGAGGACCTGCTCAGCATGGGCACTGCCA...GCATGTGGAAGAATGTGTGTGTGTGTGTGTGTGTGTTGTAACTTTCCTGTCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
3UTR-3UTR GCA 90 bp AACCCTTCCCAGCCCTGTCAGAAGAGCGCAAATATAAAATACCACCGAACCCGGCAGAGCAAGTGCCCCTaGCATGTCCCTGAGGTAGCT +
Preference number: 2 (lower is better)
Translates to: NPSQPCQKSANIKYHRTRQSKCP*HVPEVA
Trigger: AGCTACCTCAGGGACATGGCAGGGGCACTTGCTCTG...CCGGGTTCGGTGGTATTTTATATTTGCGCTCTTCTGACAGGGCTGGGAAGGGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
3UTR-3UTR GCA 90 bp TGTCCTTCCCTTCCCCGTATGTACATCACTGCCCCAAAGCTTGGGACAGCTGGGTTGCAAAGTTTTGGCTaGTGGGGTCCCACATGTCTC +
Preference number: 2 (lower is better)
Translates to: CPSLPRMYITAPKLGTAGLQSFG*WGPTCL
Trigger: GAGACATGTGGGACCCCAGCAGCCAAAACTTTGCAA...CCCAGCTGTCCCAAGCTTTGGGGCAGTGATGTACATACGGGGAAGGGAAGGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
3UTR-3UTR CCA 90 bp TGTCCTTCCCTTCCCCGTATGTACATCACTGCCCCAAAGCTTGGGACAGCTGGGCAAAGTTTTGGCTGCTaGGGTCCCACATGTCTCAAA +
Preference number: 2 (lower is better)
Translates to: CPSLPRMYITAPKLGTAGQSFGC*GPTCLK
Trigger: TTTGAGACATGTGGGACCCCAGCAGCCAAAACTTTG...CCCAGCTGTCCCAAGCTTTGGGGCAGTGATGTACATACGGGGAAGGGAAGGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
3UTR CAA 90 bp ATGCACAAACACGCCCACATCTTGAAACCTCTTCCTTGCAAAGTTTaGGCTGCTGGGGTCCCACATGTCTCAAATTCACAGAGGAGGGTG +
Preference number: 2 (lower is better)
Translates to: MHKHAHILKPLPCKV*AAGVPHVSNSQRRV
Trigger: CACCCTCCTCTGTGAATTTGAGACATGTGGGACCCCAGCAGCCAAAACTTTGCAAGGAAGAGGTTTCAAGATGTGGGCGTGTTTGTGCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
3UTR-3UTR GCA 90 bp AAGGGAAGACGTGATAGAGACAGGAAAGTTACAACACACACACACACACACACACAGAGCAAGTGCCCCTaGCATGTCCCTGAGGTAGCT +
Preference number: 2 (lower is better)
Translates to: KGRRDRDRKVTTHTHTHTQSKCP*HVPEVA
Trigger: AGCTACCTCAGGGACATGGCAGGGGCACTTGCTCTG...TGTGTGTGTGTGTGTGTGTGTTGTAACTTTCCTGTCTCTATCACGTCTTCCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
3UTR-3UTR GCA 90 bp AGAGACAGGAAAGTTACAACACACACACACACACACACACATTCTTCCACATGCCAGAGCAAGTGCCCCTaGCATGTCCCTGAGGTAGCT +
Preference number: 2 (lower is better)
Translates to: RDRKVTTHTHTHTHSSTCQSKCP*HVPEVA
Trigger: AGCTACCTCAGGGACATGGCAGGGGCACTTGCTCTG...GCATGTGGAAGAATGTGTGTGTGTGTGTGTGTGTGTTGTAACTTTCCTGTCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
3UTR-3UTR GCA 90 bp TGTCCTTCCCTTCCCCGTATGTACATCACTGCCCCAAAGCTTGGGACAGCTGGGACACATTCTTCCACATaGATACCAACACATATATGC +
Preference number: 2 (lower is better)
Translates to: CPSLPRMYITAPKLGTAGTHSST*IPTHIC
Trigger: GCATATATGTGTTGGTATGCATGTGGAAGAATGTGT...CCCAGCTGTCCCAAGCTTTGGGGCAGTGATGTACATACGGGGAAGGGAAGGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
3UTR-3UTR GCA 90 bp TCAGAAGAGCGCAAATATAAAATACCACCGAACCCGGAGGGCAAGTGGGAGGCCATACCAACACATATATaGACAAACACGCCCACATCT +
Preference number: 2 (lower is better)
Translates to: SEERKYKIPPNPEGKWEAIPTHI*TNTPTS
Trigger: AGATGTGGGCGTGTTTGTGCATATATGTGTTGGTAT...GGCCTCCCACTTGCCCTCCGGGTTCGGTGGTATTTTATATTTGCGCTCTTCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
3UTR CAA 90 bp CAACACATATATGCACAAACACGCCCACATCTTGAAACCTCTTCCTaGCAAAGTTTTGGCTGCTGGGGTCCCACATGTCTCAAATTCACA +
Preference number: 2 (lower is better)
Translates to: QHIYAQTRPHLETSS*QSFGCWGPTCLKFT
Trigger: TGTGAATTTGAGACATGTGGGACCCCAGCAGCCAAAACTTTGCAAGGAAGAGGTTTCAAGATGTGGGCGTGTTTGTGCATATATGTGTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
3UTR-3UTR GCA 90 bp AAGGGAAGACGTGATAGAGACAGGAAAGTTACAACACACACACACACACACACAATACCAACACATATATaGACAAACACGCCCACATCT +
Preference number: 2 (lower is better)
Translates to: KGRRDRDRKVTTHTHTHTIPTHI*TNTPTS
Trigger: AGATGTGGGCGTGTTTGTGCATATATGTGTTGGTAT...TGTGTGTGTGTGTGTGTGTGTTGTAACTTTCCTGTCTCTATCACGTCTTCCCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
3UTR GCA 72 bp GTGCCCATGCTGAGCAGGTCCTCACGGCCGGGCAAATaGTGGGCAGTGTCTGTCCCAGGCAGAGCAAGTGCC +
Preference number: 3 (lower is better)
Translates to: VPMLSRSSRPGK*WAVSVPGRASA
Trigger: GGCACTTGCTCTGCCTGGGACAGACACTGCCCAGCATTTGCCCGGCCGTGAGGACCTGCTCAGCATGGGCAC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
3UTR CCA 72 bp CCCATGCTGAGCAGGTCCTCACGGCCGGGCAAATGCTaGGCAGTGTCTGTCCCAGGCAGAGCAAGTGCCCCT +
Preference number: 3 (lower is better)
Translates to: PMLSRSSRPGKC*AVSVPGRASAP
Trigger: AGGGGCACTTGCTCTGCCTGGGACAGACACTGCCCAGCATTTGCCCGGCCGTGAGGACCTGCTCAGCATGGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
3UTR GCA 72 bp CTGGGCAGTGTCTGTCCCAGGCAGAGCAAGTGCCCCTaGCATGTCCCTGAGGTAGCTGGTGCCTGTGCAAAA +
Preference number: 3 (lower is better)
Translates to: LGSVCPRQSKCP*HVPEVAGACAK
Trigger: TTTTGCACAGGCACCAGCTACCTCAGGGACATGGCAGGGGCACTTGCTCTGCCTGGGACAGACACTGCCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
3UTR GCA 72 bp CAAATGCTGGGCAGTGTCTGTCCCAGGCAGAGCAAGTaGCCCTGCCATGTCCCTGAGGTAGCTGGTGCCTGT +
Preference number: 3 (lower is better)
Translates to: QMLGSVCPRQSK*PCHVPEVAGAC
Trigger: ACAGGCACCAGCTACCTCAGGGACATGGCAGGGGCACTTGCTCTGCCTGGGACAGACACTGCCCAGCATTTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
3UTR-3UTR CAA 90 bp TCAGAAGAGCGCAAATATAAAATACCACCGAACCCGGAGGGCAAGTGGGAGGCCTCACTGCCCCAAAGCTaGGGACAGCTGGGGGTAGGA +
Preference number: 3 (lower is better)
Translates to: SEERKYKIPPNPEGKWEASLPQS*GQLGVG
Trigger: TCCTACCCCCAGCTGTCCCAAGCTTTGGGGCAGTGA...GGCCTCCCACTTGCCCTCCGGGTTCGGTGGTATTTTATATTTGCGCTCTTCTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
3UTR-3UTR CAA 90 bp CCCTTCCCAGCCCTGTCAGAAGAGCGCAAATATAAAATACCACCGAACCCGGAGTCACTGCCCCAAAGCTaGGGACAGCTGGGGGTAGGA +
Preference number: 3 (lower is better)
Translates to: PFPALSEERKYKIPPNPESLPQS*GQLGVG
Trigger: TCCTACCCCCAGCTGTCCCAAGCTTTGGGGCAGTGA...CTCCGGGTTCGGTGGTATTTTATATTTGCGCTCTTCTGACAGGGCTGGGAAGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
3UTR-3UTR CAA 90 bp AACCCTTCCCAGCCCTGTCAGAAGAGCGCAAATATAAAATACCACCGAACCCGGTCACTGCCCCAAAGCTaGGGACAGCTGGGGGTAGGA +
Preference number: 3 (lower is better)
Translates to: NPSQPCQKSANIKYHRTRSLPQS*GQLGVG
Trigger: TCCTACCCCCAGCTGTCCCAAGCTTTGGGGCAGTGA...CCGGGTTCGGTGGTATTTTATATTTGCGCTCTTCTGACAGGGCTGGGAAGGGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
CDS-3UTR GCA 90 bp GGCAGTGTCTGTCCCAGGCAGAGCAAGTGCCCCTGCCATGTCCCTGAGGTAGCTGCCCCACAGCCCTGCTaGCAGCAGCCAGACAGCCCA +
Preference number: 4 (lower is better)
Translates to: GSVCPRQSKCPCHVPEVAAPQPC*QQPDSP
Trigger: TGGGCTGTCTGGCTGCTGGCAGCAGGGCTGTGGGGC...AGCTACCTCAGGGACATGGCAGGGGCACTTGCTCTGCCTGGGACAGACACTGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
CDS-3UTR CCA 90 bp GGCCGGGCAAATGCTGGGCAGTGTCTGTCCCAGGCAGAGCAAGTGCCCCTGCCAAGCGACCACTGGTGGTaGCCACACAGCGGCTGGTGT +
Preference number: 4 (lower is better)
Translates to: GRANAGQCLSQAEQVPLPSDHWW*PHSGWC
Trigger: ACACCAGCCGCTGTGTGGCCACCACCAGTGGTCGCT...TGGCAGGGGCACTTGCTCTGCCTGGGACAGACACTGCCCAGCATTTGCCCGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
CDS-3UTR CCA 90 bp GCAGGTCCTCACGGCCGGGCAAATGCTGGGCAGTGTCTGTCCCAGGCAGAGCAACGCGAGCTCAGGCAGTaGGTGCCCAGATCCTCCTCG +
Preference number: 4 (lower is better)
Translates to: AGPHGRANAGQCLSQAEQRELRQ*VPRSSS
Trigger: CGAGGAGGATCTGGGCACCCACTGCCTGAGCTCGCG...TTGCTCTGCCTGGGACAGACACTGCCCAGCATTTGCCCGGCCGTGAGGACCTGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
CDS-3UTR TCA 90 bp ATGCTGAGCAGGTCCTCACGGCCGGGCAAATGCTGGGCAGTGTCTGTCCCAGGCGGCTGGCACCGGGCGTaGCCAGGCACAATCTTGAGA +
Preference number: 4 (lower is better)
Translates to: MLSRSSRPGKCWAVSVPGGWHRA*PGTILR
Trigger: TCTCAAGATTGTGCCTGGTCACGCCCGGTGCCAGCC...GCCTGGGACAGACACTGCCCAGCATTTGCCCGGCCGTGAGGACCTGCTCAGCAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
CDS-3UTR GCA 90 bp CAAATGCTGGGCAGTGTCTGTCCCAGGCAGAGCAAGTGCCCCTGCCATGTCCCTGCCCCACAGCCCTGCTaGCAGCAGCCAGACAGCCCA +
Preference number: 4 (lower is better)
Translates to: QMLGSVCPRQSKCPCHVPAPQPC*QQPDSP
Trigger: TGGGCTGTCTGGCTGCTGGCAGCAGGGCTGTGGGGC...AGGGACATGGCAGGGGCACTTGCTCTGCCTGGGACAGACACTGCCCAGCATTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
CDS-3UTR GCA 90 bp GGCCGGGCAAATGCTGGGCAGTGTCTGTCCCAGGCAGAGCAAGTGCCCCTGCCAAAGAAGGTGGTGTTGTaGCAAGAGGCGCCCCGCAGG +
Preference number: 4 (lower is better)
Translates to: GRANAGQCLSQAEQVPLPKKVVL*QEAPRR
Trigger: CCTGCGGGGCGCCTCTTGGCACAACACCACCTTCTT...TGGCAGGGGCACTTGCTCTGCCTGGGACAGACACTGCCCAGCATTTGCCCGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
CDS-3UTR CCA 90 bp GGCAGTGTCTGTCCCAGGCAGAGCAAGTGCCCCTGCCATGTCCCTGAGGTAGCTGGCACCATCAAGCCCTaGGACCCTGTCGGCCACCAC +
Preference number: 4 (lower is better)
Translates to: GSVCPRQSKCPCHVPEVAGTIKP*DPVGHH
Trigger: GTGGTGGCCGACAGGGTCCCAGGGCTTGATGGTGCC...AGCTACCTCAGGGACATGGCAGGGGCACTTGCTCTGCCTGGGACAGACACTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
CDS-3UTR CCA 90 bp TCACGGCCGGGCAAATGCTGGGCAGTGTCTGTCCCAGGCAGAGCAAGTGCCCCTAGCGACCACTGGTGGTaGCCACACAGCGGCTGGTGT +
Preference number: 4 (lower is better)
Translates to: SRPGKCWAVSVPGRASAPSDHWW*PHSGWC
Trigger: ACACCAGCCGCTGTGTGGCCACCACCAGTGGTCGCT...AGGGGCACTTGCTCTGCCTGGGACAGACACTGCCCAGCATTTGCCCGGCCGTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
CDS-3UTR CCA 90 bp CAAATGCTGGGCAGTGTCTGTCCCAGGCAGAGCAAGTGCCCCTGCCATGTCCCTCCGAGCGACCACTGGTaGTGGCCACACAGCGGCTGG +
Preference number: 4 (lower is better)
Translates to: QMLGSVCPRQSKCPCHVPPSDHW*WPHSGW
Trigger: CCAGCCGCTGTGTGGCCACCACCAGTGGTCGCTCGG...AGGGACATGGCAGGGGCACTTGCTCTGCCTGGGACAGACACTGCCCAGCATTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
CDS-3UTR TCA 90 bp GCAGGTCCTCACGGCCGGGCAAATGCTGGGCAGTGTCTGTCCCAGGCAGAGCAACTTCCAGTCAGGGGCTaGGCACACCAACCGAGCCTT +
Preference number: 4 (lower is better)
Translates to: AGPHGRANAGQCLSQAEQLPVRG*AHQPSL
Trigger: AAGGCTCGGTTGGTGTGCTCAGCCCCTGACTGGAAG...TTGCTCTGCCTGGGACAGACACTGCCCAGCATTTGCCCGGCCGTGAGGACCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
CDS-3UTR TCA 90 bp CAAGTGGCAGTGCCCATGCTGAGCAGGTCCTCACGGCCGGGCAAATGCTGGGCACTTCCAGTCAGGGGCTaGGCACACCAACCGAGCCTT +
Preference number: 4 (lower is better)
Translates to: QVAVPMLSRSSRPGKCWALPVRG*AHQPSL
Trigger: AAGGCTCGGTTGGTGTGCTCAGCCCCTGACTGGAAG...TGCCCAGCATTTGCCCGGCCGTGAGGACCTGCTCAGCATGGGCACTGCCACTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
CDS-3UTR TCA 90 bp GGCAGTGTCTGTCCCAGGCAGAGCAAGTGCCCCTGCCATGTCCCTGAGGTAGCTGGCTGGCACCGGGCGTaGCCAGGCACAATCTTGAGA +
Preference number: 4 (lower is better)
Translates to: GSVCPRQSKCPCHVPEVAGWHRA*PGTILR
Trigger: TCTCAAGATTGTGCCTGGTCACGCCCGGTGCCAGCC...AGCTACCTCAGGGACATGGCAGGGGCACTTGCTCTGCCTGGGACAGACACTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
CDS-3UTR CCA 90 bp GCAGGTCCTCACGGCCGGGCAAATGCTGGGCAGTGTCTGTCCCAGGCAGAGCAAAACCAGGCCGAGGGCTaGGTACCGGGTCAGTATAGC +
Preference number: 4 (lower is better)
Translates to: AGPHGRANAGQCLSQAEQNQAEG*VPGQYS
Trigger: GCTATACTGACCCGGTACCCAGCCCTCGGCCTGGTT...TTGCTCTGCCTGGGACAGACACTGCCCAGCATTTGCCCGGCCGTGAGGACCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
CDS-3UTR CCA 90 bp CAAATGCTGGGCAGTGTCTGTCCCAGGCAGAGCAAGTGCCCCTGCCATGTCCCTGGCACCATCAAGCCCTaGGACCCTGTCGGCCACCAC +
Preference number: 4 (lower is better)
Translates to: QMLGSVCPRQSKCPCHVPGTIKP*DPVGHH
Trigger: GTGGTGGCCGACAGGGTCCCAGGGCTTGATGGTGCC...AGGGACATGGCAGGGGCACTTGCTCTGCCTGGGACAGACACTGCCCAGCATTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
CDS-3UTR CCA 90 bp TCACGGCCGGGCAAATGCTGGGCAGTGTCTGTCCCAGGCAGAGCAAGTGCCCCTAGTTCCTCCACCATGTaGATCCAGGGCCCCAGGCTC +
Preference number: 4 (lower is better)
Translates to: SRPGKCWAVSVPGRASAPSSSTM*IQGPRL
Trigger: GAGCCTGGGGCCCTGGATCCACATGGTGGAGGAACT...AGGGGCACTTGCTCTGCCTGGGACAGACACTGCCCAGCATTTGCCCGGCCGTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
CDS-3UTR CCA 90 bp GCAGGTCCTCACGGCCGGGCAAATGCTGGGCAGTGTCTGTCCCAGGCAGAGCAAAGTTCCTCCACCATGTaGATCCAGGGCCCCAGGCTC +
Preference number: 4 (lower is better)
Translates to: AGPHGRANAGQCLSQAEQSSSTM*IQGPRL
Trigger: GAGCCTGGGGCCCTGGATCCACATGGTGGAGGAACT...TTGCTCTGCCTGGGACAGACACTGCCCAGCATTTGCCCGGCCGTGAGGACCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
CDS-3UTR CCA 90 bp CAAGTGGCAGTGCCCATGCTGAGCAGGTCCTCACGGCCGGGCAAATGCTGGGCATCTGCAGGCAGGTCCTaGCTTCCGAAGGTCCAGTGG +
Preference number: 4 (lower is better)
Translates to: QVAVPMLSRSSRPGKCWASAGRS*LPKVQW
Trigger: CCACTGGACCTTCGGAAGCCAGGACCTGCCTGCAGA...TGCCCAGCATTTGCCCGGCCGTGAGGACCTGCTCAGCATGGGCACTGCCACTTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
CDS-3UTR CCA 90 bp CAAATGCTGGGCAGTGTCTGTCCCAGGCAGAGCAAGTGCCCCTGCCATGTCCCTCGCGAGCTCAGGCAGTaGGTGCCCAGATCCTCCTCG +
Preference number: 4 (lower is better)
Translates to: QMLGSVCPRQSKCPCHVPRELRQ*VPRSSS
Trigger: CGAGGAGGATCTGGGCACCCACTGCCTGAGCTCGCG...AGGGACATGGCAGGGGCACTTGCTCTGCCTGGGACAGACACTGCCCAGCATTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
CDS-3UTR GCA 90 bp GCAGGTCCTCACGGCCGGGCAAATGCTGGGCAGTGTCTGTCCCAGGCAGAGCAATCAGGAAGTCCTGGATaGCTGTCTGGGAGAACCGCC +
Preference number: 4 (lower is better)
Translates to: AGPHGRANAGQCLSQAEQSGSPG*LSGRTA
Trigger: GGCGGTTCTCCCAGACAGGCATCCAGGACTTCCTGA...TTGCTCTGCCTGGGACAGACACTGCCCAGCATTTGCCCGGCCGTGAGGACCTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
CDS-3UTR GCA 90 bp GGCAGTGTCTGTCCCAGGCAGAGCAAGTGCCCCTGCCATGTCCCTGAGGTAGCTAAGAAGGTGGTGTTGTaGCAAGAGGCGCCCCGCAGG +
Preference number: 4 (lower is better)
Translates to: GSVCPRQSKCPCHVPEVAKKVVL*QEAPRR
Trigger: CCTGCGGGGCGCCTCTTGGCACAACACCACCTTCTT...AGCTACCTCAGGGACATGGCAGGGGCACTTGCTCTGCCTGGGACAGACACTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
CDS-3UTR CCA 90 bp GGCCGGGCAAATGCTGGGCAGTGTCTGTCCCAGGCAGAGCAAGTGCCCCTGCCATCCTGGATGCCTGTCTaGGAGAACCGCCTCACTACT +
Preference number: 4 (lower is better)
Translates to: GRANAGQCLSQAEQVPLPSWMPV*ENRLTT
Trigger: AGTAGTGAGGCGGTTCTCCCAGACAGGCATCCAGGA...TGGCAGGGGCACTTGCTCTGCCTGGGACAGACACTGCCCAGCATTTGCCCGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
CDS-3UTR CCA 90 bp GGCCGGGCAAATGCTGGGCAGTGTCTGTCCCAGGCAGAGCAAGTGCCCCTGCCAAAACCCCGAAGAAGGTaGTGTTGTGCCAAGAGGCGC +
Preference number: 4 (lower is better)
Translates to: GRANAGQCLSQAEQVPLPKPRRR*CCAKRR
Trigger: GCGCCTCTTGGCACAACACCACCTTCTTCGGGGTTT...TGGCAGGGGCACTTGCTCTGCCTGGGACAGACACTGCCCAGCATTTGCCCGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
CDS-3UTR CCA 90 bp TCACGGCCGGGCAAATGCTGGGCAGTGTCTGTCCCAGGCAGAGCAAGTGCCCCTGGGCATGGGCCAAATTaGACGAGAGGTGGCAGGGTA +
Preference number: 4 (lower is better)
Translates to: SRPGKCWAVSVPGRASAPGHGPN*TRGGRV
Trigger: TACCCTGCCACCTCTCGTCCAATTTGGCCCATGCCC...AGGGGCACTTGCTCTGCCTGGGACAGACACTGCCCAGCATTTGCCCGGCCGTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
CDS-3UTR CCA 90 bp GGCCGGGCAAATGCTGGGCAGTGTCTGTCCCAGGCAGAGCAAGTGCCCCTGCCACTTCCGAAGGTCCAGTaGGCATGGGCCAAATTGGAC +
Preference number: 4 (lower is better)
Translates to: GRANAGQCLSQAEQVPLPLPKVQ*AWAKLD
Trigger: GTCCAATTTGGCCCATGCCCACTGGACCTTCGGAAG...TGGCAGGGGCACTTGCTCTGCCTGGGACAGACACTGCCCAGCATTTGCCCGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
CDS-3UTR TCA 90 bp GCAGGTCCTCACGGCCGGGCAAATGCTGGGCAGTGTCTGTCCCAGGCAGAGCAACCGCCTTCAGCTGGTTaGAGTAGACCTTCCAGTCAG +
Preference number: 4 (lower is better)
Translates to: AGPHGRANAGQCLSQAEQPPSAG*SRPSSQ
Trigger: CTGACTGGAAGGTCTACTTCAACCAGCTGAAGGCGG...TTGCTCTGCCTGGGACAGACACTGCCCAGCATTTGCCCGGCCGTGAGGACCTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
CDS-3UTR TCA 90 bp TCACGGCCGGGCAAATGCTGGGCAGTGTCTGTCCCAGGCAGAGCAAGTGCCCCTCACAGCGGCTGGTGTTaGCATTCCAGGCACAGTAAG +
Preference number: 4 (lower is better)
Translates to: SRPGKCWAVSVPGRASAPHSGWC*HSRHSK
Trigger: CTTACTGTGCCTGGAATGTCAACACCAGCCGCTGTG...AGGGGCACTTGCTCTGCCTGGGACAGACACTGCCCAGCATTTGCCCGGCCGTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
CDS-3UTR GCA 90 bp TGGCTGCTGGGGTCCCACATGTCTCAAATTCACAGAGGAGGGTGTGTCTCCTGTCAGGCCCCACAGCCCTaGTGCCAGCAGCCAGACAGC +
Preference number: 4 (lower is better)
Translates to: WLLGSHMSQIHRGGCVSCQAPQP*CQQPDS
Trigger: GCTGTCTGGCTGCTGGCAGCAGGGCTGTGGGGCCTG...ACAGGAGACACACCCTCCTCTGTGAATTTGAGACATGTGGGACCCCAGCAGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
CDS-3UTR GCA 90 bp GGCCGGGCAAATGCTGGGCAGTGTCTGTCCCAGGCAGAGCAAGTGCCCCTGCCACAAGAGATCGCTCCTTaGAGCTCCAGAGCCTCTACA +
Preference number: 4 (lower is better)
Translates to: GRANAGQCLSQAEQVPLPQEIAP*SSRAST
Trigger: TGTAGAGGCTCTGGAGCTGCAAGGAGCGATCTCTTG...TGGCAGGGGCACTTGCTCTGCCTGGGACAGACACTGCCCAGCATTTGCCCGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
CDS-3UTR GCA 90 bp GGCCGGGCAAATGCTGGGCAGTGTCTGTCCCAGGCAGAGCAAGTGCCCCTGCCATCCTGGTCAAACACCTaGAGTTCCTCCACCATGTGG +
Preference number: 4 (lower is better)
Translates to: GRANAGQCLSQAEQVPLPSWSNT*SSSTMW
Trigger: CCACATGGTGGAGGAACTGCAGGTGTTTGACCAGGA...TGGCAGGGGCACTTGCTCTGCCTGGGACAGACACTGCCCAGCATTTGCCCGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
CDS-3UTR GCA 90 bp CAAATGCTGGGCAGTGTCTGTCCCAGGCAGAGCAAGTGCCCCTGCCATGTCCCTGGAGCCAGGTTGTTCTaGAGGCAGGTCCTGGCTTCC +
Preference number: 4 (lower is better)
Translates to: QMLGSVCPRQSKCPCHVPGARLF*RQVLAS
Trigger: GGAAGCCAGGACCTGCCTGCAGAACAACCTGGCTCC...AGGGACATGGCAGGGGCACTTGCTCTGCCTGGGACAGACACTGCCCAGCATTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
CDS-3UTR CCA 90 bp TCACGGCCGGGCAAATGCTGGGCAGTGTCTGTCCCAGGCAGAGCAAGTGCCCCTTCCTGGATGCCTGTCTaGGAGAACCGCCTCACTACT +
Preference number: 4 (lower is better)
Translates to: SRPGKCWAVSVPGRASAPSWMPV*ENRLTT
Trigger: AGTAGTGAGGCGGTTCTCCCAGACAGGCATCCAGGA...AGGGGCACTTGCTCTGCCTGGGACAGACACTGCCCAGCATTTGCCCGGCCGTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
CDS-3UTR CCA 90 bp CAAATGCTGGGCAGTGTCTGTCCCAGGCAGAGCAAGTGCCCCTGCCATGTCCCTAACCAGGCCGAGGGCTaGGTACCGGGTCAGTATAGC +
Preference number: 4 (lower is better)
Translates to: QMLGSVCPRQSKCPCHVPNQAEG*VPGQYS
Trigger: GCTATACTGACCCGGTACCCAGCCCTCGGCCTGGTT...AGGGACATGGCAGGGGCACTTGCTCTGCCTGGGACAGACACTGCCCAGCATTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
CDS-3UTR CCA 90 bp CAAATGCTGGGCAGTGTCTGTCCCAGGCAGAGCAAGTGCCCCTGCCATGTCCCTAACCGAGGCTTCACCTaGTCCTCCATCAGGGGGTGC +
Preference number: 4 (lower is better)
Translates to: QMLGSVCPRQSKCPCHVPNRGFT*SSIRGC
Trigger: GCACCCCCTGATGGAGGACCAGGTGAAGCCTCGGTT...AGGGACATGGCAGGGGCACTTGCTCTGCCTGGGACAGACACTGCCCAGCATTTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
CDS-3UTR CCA 90 bp CAAATGCTGGGCAGTGTCTGTCCCAGGCAGAGCAAGTGCCCCTGCCATGTCCCTAGTTCCTCCACCATGTaGATCCAGGGCCCCAGGCTC +
Preference number: 4 (lower is better)
Translates to: QMLGSVCPRQSKCPCHVPSSSTM*IQGPRL
Trigger: GAGCCTGGGGCCCTGGATCCACATGGTGGAGGAACT...AGGGACATGGCAGGGGCACTTGCTCTGCCTGGGACAGACACTGCCCAGCATTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
CDS-3UTR CCA 90 bp GGCCGGGCAAATGCTGGGCAGTGTCTGTCCCAGGCAGAGCAAGTGCCCCTGCCACACCAGACTTTCCACTaGCTCCTGGTCAAACACCTG +
Preference number: 4 (lower is better)
Translates to: GRANAGQCLSQAEQVPLPHQTFH*LLVKHL
Trigger: CAGGTGTTTGACCAGGAGCCAGTGGAAAGTCTGGTG...TGGCAGGGGCACTTGCTCTGCCTGGGACAGACACTGCCCAGCATTTGCCCGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
CDS-3UTR CCA 90 bp GGCCGGGCAAATGCTGGGCAGTGTCTGTCCCAGGCAGAGCAAGTGCCCCTGCCAAAGTTCGCCACATGTTaGACCAGAAAGGACCCCGAG +
Preference number: 4 (lower is better)
Translates to: GRANAGQCLSQAEQVPLPKFATC*TRKDPE
Trigger: CTCGGGGTCCTTTCTGGTCCAACATGTGGCGAACTT...TGGCAGGGGCACTTGCTCTGCCTGGGACAGACACTGCCCAGCATTTGCCCGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
CDS-3UTR CCA 90 bp GCAGGTCCTCACGGCCGGGCAAATGCTGGGCAGTGTCTGTCCCAGGCAGAGCAACTTCCGAAGGTCCAGTaGGCATGGGCCAAATTGGAC +
Preference number: 4 (lower is better)
Translates to: AGPHGRANAGQCLSQAEQLPKVQ*AWAKLD
Trigger: GTCCAATTTGGCCCATGCCCACTGGACCTTCGGAAG...TTGCTCTGCCTGGGACAGACACTGCCCAGCATTTGCCCGGCCGTGAGGACCTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
CDS-3UTR CCA 90 bp CAAATGCTGGGCAGTGTCTGTCCCAGGCAGAGCAAGTGCCCCTGCCATGTCCCTTCTGCAGGCAGGTCCTaGCTTCCGAAGGTCCAGTGG +
Preference number: 4 (lower is better)
Translates to: QMLGSVCPRQSKCPCHVPSAGRS*LPKVQW
Trigger: CCACTGGACCTTCGGAAGCCAGGACCTGCCTGCAGA...AGGGACATGGCAGGGGCACTTGCTCTGCCTGGGACAGACACTGCCCAGCATTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
CDS-3UTR TCA 90 bp ATGCTGAGCAGGTCCTCACGGCCGGGCAAATGCTGGGCAGTGTCTGTCCCAGGCACAAGGAGTCCGGTGTaGCCCTTAGCTGGGTCATAT +
Preference number: 4 (lower is better)
Translates to: MLSRSSRPGKCWAVSVPGTRSPV*PLAGSY
Trigger: ATATGACCCAGCTAAGGGTCACACCGGACTCCTTGT...GCCTGGGACAGACACTGCCCAGCATTTGCCCGGCCGTGAGGACCTGCTCAGCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
CDS-3UTR TCA 90 bp ATGCTGAGCAGGTCCTCACGGCCGGGCAAATGCTGGGCAGTGTCTGTCCCAGGCGTTATTGAGTGTGGCTaGGTACAGCTCACCGTCCAC +
Preference number: 4 (lower is better)
Translates to: MLSRSSRPGKCWAVSVPGVIECG*VQLTVH
Trigger: GTGGACGGTGAGCTGTACTCAGCCACACTCAATAAC...GCCTGGGACAGACACTGCCCAGCATTTGCCCGGCCGTGAGGACCTGCTCAGCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
CDS-3UTR TCA 90 bp ATGCTGAGCAGGTCCTCACGGCCGGGCAAATGCTGGGCAGTGTCTGTCCCAGGCAGCACCTTCTTGCTCTaGGACAGCACCAGACTTTCC +
Preference number: 4 (lower is better)
Translates to: MLSRSSRPGKCWAVSVPGSTFLL*DSTRLS
Trigger: GGAAAGTCTGGTGCTGTCTCAGAGCAAGAAGGTGCT...GCCTGGGACAGACACTGCCCAGCATTTGCCCGGCCGTGAGGACCTGCTCAGCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
CDS-3UTR TCA 90 bp GCAGGTCCTCACGGCCGGGCAAATGCTGGGCAGTGTCTGTCCCAGGCAGAGCAAAGCACCTTCTTGCTCTaGGACAGCACCAGACTTTCC +
Preference number: 4 (lower is better)
Translates to: AGPHGRANAGQCLSQAEQSTFLL*DSTRLS
Trigger: GGAAAGTCTGGTGCTGTCTCAGAGCAAGAAGGTGCT...TTGCTCTGCCTGGGACAGACACTGCCCAGCATTTGCCCGGCCGTGAGGACCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
CDS-3UTR TCA 90 bp GGCAGTGTCTGTCCCAGGCAGAGCAAGTGCCCCTGCCATGTCCCTGAGGTAGCTCACAGCGGCTGGTGTTaGCATTCCAGGCACAGTAAG +
Preference number: 4 (lower is better)
Translates to: GSVCPRQSKCPCHVPEVAHSGWC*HSRHSK
Trigger: CTTACTGTGCCTGGAATGTCAACACCAGCCGCTGTG...AGCTACCTCAGGGACATGGCAGGGGCACTTGCTCTGCCTGGGACAGACACTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
CDS-3UTR TCA 90 bp TGTCCTTCCCTTCCCCGTATGTACATCACTGCCCCAAAGCTTGGGACAGCTGGGGGCTGGCACCGGGCGTaGCCAGGCACAATCTTGAGA +
Preference number: 4 (lower is better)
Translates to: CPSLPRMYITAPKLGTAGGWHRA*PGTILR
Trigger: TCTCAAGATTGTGCCTGGTCACGCCCGGTGCCAGCC...CCCAGCTGTCCCAAGCTTTGGGGCAGTGATGTACATACGGGGAAGGGAAGGACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
CDS-3UTR GCA 90 bp CCCTTCCCAGCCCTGTCAGAAGAGCGCAAATATAAAATACCACCGAACCCGGAGCAGGCCCCACAGCCCTaGTGCCAGCAGCCAGACAGC +
Preference number: 4 (lower is better)
Translates to: PFPALSEERKYKIPPNPEQAPQP*CQQPDS
Trigger: GCTGTCTGGCTGCTGGCAGCAGGGCTGTGGGGCCTG...CTCCGGGTTCGGTGGTATTTTATATTTGCGCTCTTCTGACAGGGCTGGGAAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
CDS-3UTR GCA 90 bp GGCCGGGCAAATGCTGGGCAGTGTCTGTCCCAGGCAGAGCAAGTGCCCCTGCCAAGCATTCGGTCTGGTTaGTCTTCCCTTTCTGGGTAC +
Preference number: 4 (lower is better)
Translates to: GRANAGQCLSQAEQVPLPSIRSG*SSLSGY
Trigger: GTACCCAGAAAGGGAAGAGCAACCAGACCGAATGCT...TGGCAGGGGCACTTGCTCTGCCTGGGACAGACACTGCCCAGCATTTGCCCGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
CDS-3UTR GCA 90 bp ATGCTGAGCAGGTCCTCACGGCCGGGCAAATGCTGGGCAGTGTCTGTCCCAGGCTCCTGGTCAAACACCTaGAGTTCCTCCACCATGTGG +
Preference number: 4 (lower is better)
Translates to: MLSRSSRPGKCWAVSVPGSWSNT*SSSTMW
Trigger: CCACATGGTGGAGGAACTGCAGGTGTTTGACCAGGA...GCCTGGGACAGACACTGCCCAGCATTTGCCCGGCCGTGAGGACCTGCTCAGCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
CDS-3UTR GCA 90 bp CAAGTGGCAGTGCCCATGCTGAGCAGGTCCTCACGGCCGGGCAAATGCTGGGCATCCTGGTCAAACACCTaGAGTTCCTCCACCATGTGG +
Preference number: 4 (lower is better)
Translates to: QVAVPMLSRSSRPGKCWASWSNT*SSSTMW
Trigger: CCACATGGTGGAGGAACTGCAGGTGTTTGACCAGGA...TGCCCAGCATTTGCCCGGCCGTGAGGACCTGCTCAGCATGGGCACTGCCACTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
CDS-3UTR CCA 90 bp GGCAGTGTCTGTCCCAGGCAGAGCAAGTGCCCCTGCCATGTCCCTGAGGTAGCTTCCTGGATGCCTGTCTaGGAGAACCGCCTCACTACT +
Preference number: 4 (lower is better)
Translates to: GSVCPRQSKCPCHVPEVASWMPV*ENRLTT
Trigger: AGTAGTGAGGCGGTTCTCCCAGACAGGCATCCAGGA...AGCTACCTCAGGGACATGGCAGGGGCACTTGCTCTGCCTGGGACAGACACTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
CDS-3UTR CCA 90 bp GGCAGTGTCTGTCCCAGGCAGAGCAAGTGCCCCTGCCATGTCCCTGAGGTAGCTAAACCCCGAAGAAGGTaGTGTTGTGCCAAGAGGCGC +
Preference number: 4 (lower is better)
Translates to: GSVCPRQSKCPCHVPEVAKPRRR*CCAKRR
Trigger: GCGCCTCTTGGCACAACACCACCTTCTTCGGGGTTT...AGCTACCTCAGGGACATGGCAGGGGCACTTGCTCTGCCTGGGACAGACACTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
CDS-3UTR CCA 90 bp CAAGTGGCAGTGCCCATGCTGAGCAGGTCCTCACGGCCGGGCAAATGCTGGGCAAAGTTCGCCACATGTTaGACCAGAAAGGACCCCGAG +
Preference number: 4 (lower is better)
Translates to: QVAVPMLSRSSRPGKCWAKFATC*TRKDPE
Trigger: CTCGGGGTCCTTTCTGGTCCAACATGTGGCGAACTT...TGCCCAGCATTTGCCCGGCCGTGAGGACCTGCTCAGCATGGGCACTGCCACTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
CDS-3UTR CCA 90 bp CAAGTGGCAGTGCCCATGCTGAGCAGGTCCTCACGGCCGGGCAAATGCTGGGCAAAATTGGACGAGAGGTaGCAGGGTAGGACCAGGTCT +
Preference number: 4 (lower is better)
Translates to: QVAVPMLSRSSRPGKCWAKLDER*QGRTRS
Trigger: AGACCTGGTCCTACCCTGCCACCTCTCGTCCAATTT...TGCCCAGCATTTGCCCGGCCGTGAGGACCTGCTCAGCATGGGCACTGCCACTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
CDS-3UTR TCA 90 bp CAAATGCTGGGCAGTGTCTGTCCCAGGCAGAGCAAGTGCCCCTGCCATGTCCCTTGTCATCGTCTCCCGTaGAGCTTCCCACACTCTCAG +
Preference number: 4 (lower is better)
Translates to: QMLGSVCPRQSKCPCHVPCHRLP*SFPHSQ
Trigger: CTGAGAGTGTGGGAAGCTTCACGGGAGACGATGACA...AGGGACATGGCAGGGGCACTTGCTCTGCCTGGGACAGACACTGCCCAGCATTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
CDS-3UTR TCA 90 bp TGTCCTTCCCTTCCCCGTATGTACATCACTGCCCCAAAGCTTGGGACAGCTGGGCTTCCAGTCAGGGGCTaGGCACACCAACCGAGCCTT +
Preference number: 4 (lower is better)
Translates to: CPSLPRMYITAPKLGTAGLPVRG*AHQPSL
Trigger: AAGGCTCGGTTGGTGTGCTCAGCCCCTGACTGGAAG...CCCAGCTGTCCCAAGCTTTGGGGCAGTGATGTACATACGGGGAAGGGAAGGACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
CDS-3UTR TCA 90 bp CAAATGCTGGGCAGTGTCTGTCCCAGGCAGAGCAAGTGCCCCTGCCATGTCCCTCCGCCTTCAGCTGGTTaGAGTAGACCTTCCAGTCAG +
Preference number: 4 (lower is better)
Translates to: QMLGSVCPRQSKCPCHVPPPSAG*SRPSSQ
Trigger: CTGACTGGAAGGTCTACTTCAACCAGCTGAAGGCGG...AGGGACATGGCAGGGGCACTTGCTCTGCCTGGGACAGACACTGCCCAGCATTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
CDS-3UTR TCA 90 bp GGCAGTGTCTGTCCCAGGCAGAGCAAGTGCCCCTGCCATGTCCCTGAGGTAGCTAGCACCTTCTTGCTCTaGGACAGCACCAGACTTTCC +
Preference number: 4 (lower is better)
Translates to: GSVCPRQSKCPCHVPEVASTFLL*DSTRLS
Trigger: GGAAAGTCTGGTGCTGTCTCAGAGCAAGAAGGTGCT...AGCTACCTCAGGGACATGGCAGGGGCACTTGCTCTGCCTGGGACAGACACTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
CDS-3UTR TCA 90 bp CAAATGCTGGGCAGTGTCTGTCCCAGGCAGAGCAAGTGCCCCTGCCATGTCCCTCACAGCGGCTGGTGTTaGCATTCCAGGCACAGTAAG +
Preference number: 4 (lower is better)
Translates to: QMLGSVCPRQSKCPCHVPHSGWC*HSRHSK
Trigger: CTTACTGTGCCTGGAATGTCAACACCAGCCGCTGTG...AGGGACATGGCAGGGGCACTTGCTCTGCCTGGGACAGACACTGCCCAGCATTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
CDS-3UTR TCA 90 bp GCAGGTCCTCACGGCCGGGCAAATGCTGGGCAGTGTCTGTCCCAGGCAGAGCAAGACCAGGCACAATCTTaGGAGAGCCATCCGAATAGT +
Preference number: 4 (lower is better)
Translates to: AGPHGRANAGQCLSQAEQDQAQS*ESHPNS
Trigger: ACTATTCGGATGGCTCTCTCAAGATTGTGCCTGGTC...TTGCTCTGCCTGGGACAGACACTGCCCAGCATTTGCCCGGCCGTGAGGACCTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
CDS-3UTR GCA 90 bp TCACGGCCGGGCAAATGCTGGGCAGTGTCTGTCCCAGGCAGAGCAAGTGCCCCTAGCATTCGGTCTGGTTaGTCTTCCCTTTCTGGGTAC +
Preference number: 4 (lower is better)
Translates to: SRPGKCWAVSVPGRASAPSIRSG*SSLSGY
Trigger: GTACCCAGAAAGGGAAGAGCAACCAGACCGAATGCT...AGGGGCACTTGCTCTGCCTGGGACAGACACTGCCCAGCATTTGCCCGGCCGTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
CDS-3UTR GCA 90 bp GCAGGTCCTCACGGCCGGGCAAATGCTGGGCAGTGTCTGTCCCAGGCAGAGCAACCCATCCTCAAATTCTaGACGGTCCAAGGTGAACGT +
Preference number: 4 (lower is better)
Translates to: AGPHGRANAGQCLSQAEQPILKF*TVQGER
Trigger: ACGTTCACCTTGGACCGTGCAGAATTTGAGGATGGG...TTGCTCTGCCTGGGACAGACACTGCCCAGCATTTGCCCGGCCGTGAGGACCTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
CDS-3UTR GCA 90 bp TCACGGCCGGGCAAATGCTGGGCAGTGTCTGTCCCAGGCAGAGCAAGTGCCCCTCCCATCCTCAAATTCTaGACGGTCCAAGGTGAACGT +
Preference number: 4 (lower is better)
Translates to: SRPGKCWAVSVPGRASAPPILKF*TVQGER
Trigger: ACGTTCACCTTGGACCGTGCAGAATTTGAGGATGGG...AGGGGCACTTGCTCTGCCTGGGACAGACACTGCCCAGCATTTGCCCGGCCGTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
CDS-3UTR GCA 90 bp TCACGGCCGGGCAAATGCTGGGCAGTGTCTGTCCCAGGCAGAGCAAGTGCCCCTCTGGTACTCACAAACTaGAGACAGGTCCATATCGCC +
Preference number: 4 (lower is better)
Translates to: SRPGKCWAVSVPGRASAPLVLTN*RQVHIA
Trigger: GGCGATATGGACCTGTCTGCAGTTTGTGAGTACCAG...AGGGGCACTTGCTCTGCCTGGGACAGACACTGCCCAGCATTTGCCCGGCCGTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
CDS-3UTR GCA 90 bp GCAGGTCCTCACGGCCGGGCAAATGCTGGGCAGTGTCTGTCCCAGGCAGAGCAATCCTCCATCAGGGGGTaGTTCTTGATGAAGTTGAGG +
Preference number: 4 (lower is better)
Translates to: AGPHGRANAGQCLSQAEQSSIRG*FLMKLR
Trigger: CCTCAACTTCATCAAGAAGCACCCCCTGATGGAGGA...TTGCTCTGCCTGGGACAGACACTGCCCAGCATTTGCCCGGCCGTGAGGACCTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
CDS-3UTR GCA 90 bp CAAGTGGCAGTGCCCATGCTGAGCAGGTCCTCACGGCCGGGCAAATGCTGGGCATCCTCCATCAGGGGGTaGTTCTTGATGAAGTTGAGG +
Preference number: 4 (lower is better)
Translates to: QVAVPMLSRSSRPGKCWASSIRG*FLMKLR
Trigger: CCTCAACTTCATCAAGAAGCACCCCCTGATGGAGGA...TGCCCAGCATTTGCCCGGCCGTGAGGACCTGCTCAGCATGGGCACTGCCACTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
CDS-3UTR GCA 90 bp TGTCCTTCCCTTCCCCGTATGTACATCACTGCCCCAAAGCTTGGGACAGCTGGGGGAGCCAGGTTGTTCTaGAGGCAGGTCCTGGCTTCC +
Preference number: 4 (lower is better)
Translates to: CPSLPRMYITAPKLGTAGGARLF*RQVLAS
Trigger: GGAAGCCAGGACCTGCCTGCAGAACAACCTGGCTCC...CCCAGCTGTCCCAAGCTTTGGGGCAGTGATGTACATACGGGGAAGGGAAGGACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
CDS-3UTR GCA 90 bp TCACGGCCGGGCAAATGCTGGGCAGTGTCTGTCCCAGGCAGAGCAAGTGCCCCTAACAAGGTAGCTTTCTaGAGCCAGTCTTGTCCCCTG +
Preference number: 4 (lower is better)
Translates to: SRPGKCWAVSVPGRASAPNKVAF*SQSCPL
Trigger: CAGGGGACAAGACTGGCTGCAGAAAGCTACCTTGTT...AGGGGCACTTGCTCTGCCTGGGACAGACACTGCCCAGCATTTGCCCGGCCGTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
CDS-3UTR GCA 90 bp CAAGTGGCAGTGCCCATGCTGAGCAGGTCCTCACGGCCGGGCAAATGCTGGGCAAACAAGGTAGCTTTCTaGAGCCAGTCTTGTCCCCTG +
Preference number: 4 (lower is better)
Translates to: QVAVPMLSRSSRPGKCWANKVAF*SQSCPL
Trigger: CAGGGGACAAGACTGGCTGCAGAAAGCTACCTTGTT...TGCCCAGCATTTGCCCGGCCGTGAGGACCTGCTCAGCATGGGCACTGCCACTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
CDS-3UTR GCA 90 bp CCCTTCCCAGCCCTGTCAGAAGAGCGCAAATATAAAATACCACCGAACCCGGAGGAGGCTGGCCAGGTATaGCAGGAGGTGGGGAAGGGG +
Preference number: 4 (lower is better)
Translates to: PFPALSEERKYKIPPNPEEAGQV*QEVGKG
Trigger: CCCCTTCCCCACCTCCTGGCATACCTGGCCAGCCTC...CTCCGGGTTCGGTGGTATTTTATATTTGCGCTCTTCTGACAGGGCTGGGAAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
CDS-3UTR CCA 90 bp GGCCGGGCAAATGCTGGGCAGTGTCTGTCCCAGGCAGAGCAAGTGCCCCTGCCAAATTTTCTTCTCAGCTaGAGCCTCCCAAGAGATCGC +
Preference number: 4 (lower is better)
Translates to: GRANAGQCLSQAEQVPLPNFLLS*SLPRDR
Trigger: GCGATCTCTTGGGAGGCTCCAGCTGAGAAGAAAATT...TGGCAGGGGCACTTGCTCTGCCTGGGACAGACACTGCCCAGCATTTGCCCGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
CDS-3UTR CCA 90 bp GGCCGGGCAAATGCTGGGCAGTGTCTGTCCCAGGCAGAGCAAGTGCCCCTGCCACTTAGCTGGGTCATATaGGCATTTACCCTTCCCATC +
Preference number: 4 (lower is better)
Translates to: GRANAGQCLSQAEQVPLPLSWVI*AFTLPI
Trigger: GATGGGAAGGGTAAATGCCCATATGACCCAGCTAAG...TGGCAGGGGCACTTGCTCTGCCTGGGACAGACACTGCCCAGCATTTGCCCGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
CDS-3UTR CCA 90 bp GCAGGTCCTCACGGCCGGGCAAATGCTGGGCAGTGTCTGTCCCAGGCAGAGCAAGGTGTGACCCTTAGCTaGGTCATATGGGCATTTACC +
Preference number: 4 (lower is better)
Translates to: AGPHGRANAGQCLSQAEQGVTLS*VIWAFT
Trigger: GGTAAATGCCCATATGACCCAGCTAAGGGTCACACC...TTGCTCTGCCTGGGACAGACACTGCCCAGCATTTGCCCGGCCGTGAGGACCTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
CDS-3UTR CCA 90 bp GGTCCCACATGTCTCAAATTCACAGAGGAGGGTGTGTCTCCTGTGAGGCTGAAGGGCACCATCAAGCCCTaGGACCCTGTCGGCCACCAC +
Preference number: 4 (lower is better)
Translates to: GPTCLKFTEEGVSPVRLKGTIKP*DPVGHH
Trigger: GTGGTGGCCGACAGGGTCCCAGGGCTTGATGGTGCC...CTTCAGCCTCACAGGAGACACACCCTCCTCTGTGAATTTGAGACATGTGGGACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
CDS-3UTR CCA 90 bp ATGCTGAGCAGGTCCTCACGGCCGGGCAAATGCTGGGCAGTGTCTGTCCCAGGCACAACACTGTATAGGTaGCACCATCAAGCCCTGGGA +
Preference number: 4 (lower is better)
Translates to: MLSRSSRPGKCWAVSVPGTTLYR*HHQALG
Trigger: TCCCAGGGCTTGATGGTGCCACCTATACAGTGTTGT...GCCTGGGACAGACACTGCCCAGCATTTGCCCGGCCGTGAGGACCTGCTCAGCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
CDS-3UTR CCA 90 bp GCAGGTCCTCACGGCCGGGCAAATGCTGGGCAGTGTCTGTCCCAGGCAGAGCAAACAACACTGTATAGGTaGCACCATCAAGCCCTGGGA +
Preference number: 4 (lower is better)
Translates to: AGPHGRANAGQCLSQAEQTTLYR*HHQALG
Trigger: TCCCAGGGCTTGATGGTGCCACCTATACAGTGTTGT...TTGCTCTGCCTGGGACAGACACTGCCCAGCATTTGCCCGGCCGTGAGGACCTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
CDS-3UTR CCA 90 bp TCCCACATGTCTCAAATTCACAGAGGAGGGTGTGTCTCCTGTGAGGCTGAAGTCCCGAGCGACCACTGGTaGTGGCCACACAGCGGCTGG +
Preference number: 4 (lower is better)
Translates to: SHMSQIHRGGCVSCEAEVPSDHW*WPHSGW
Trigger: CCAGCCGCTGTGTGGCCACCACCAGTGGTCGCTCGG...GACTTCAGCCTCACAGGAGACACACCCTCCTCTGTGAATTTGAGACATGTGGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
CDS-3UTR CCA 90 bp TGTCCTTCCCTTCCCCGTATGTACATCACTGCCCCAAAGCTTGGGACAGCTGGGTCTGCAGGCAGGTCCTaGCTTCCGAAGGTCCAGTGG +
Preference number: 4 (lower is better)
Translates to: CPSLPRMYITAPKLGTAGSAGRS*LPKVQW
Trigger: CCACTGGACCTTCGGAAGCCAGGACCTGCCTGCAGA...CCCAGCTGTCCCAAGCTTTGGGGCAGTGATGTACATACGGGGAAGGGAAGGACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
CDS-3UTR TCA 90 bp CAAGTGGCAGTGCCCATGCTGAGCAGGTCCTCACGGCCGGGCAAATGCTGGGCAGAGGAATTGTATGGCTaGAGGAAGCGGATGAAGTTG +
Preference number: 4 (lower is better)
Translates to: QVAVPMLSRSSRPGKCWAEELYG*RKRMKL
Trigger: CAACTTCATCCGCTTCCTTCAGCCATACAATTCCTC...TGCCCAGCATTTGCCCGGCCGTGAGGACCTGCTCAGCATGGGCACTGCCACTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
CDS-3UTR GCA 90 bp GGCAGTGTCTGTCCCAGGCAGAGCAAGTGCCCCTGCCATGTCCCTGAGGTAGCTCCCATCCTCAAATTCTaGACGGTCCAAGGTGAACGT +
Preference number: 4 (lower is better)
Translates to: GSVCPRQSKCPCHVPEVAPILKF*TVQGER
Trigger: ACGTTCACCTTGGACCGTGCAGAATTTGAGGATGGG...AGCTACCTCAGGGACATGGCAGGGGCACTTGCTCTGCCTGGGACAGACACTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
CDS-3UTR GCA 90 bp GGCAGTGTCTGTCCCAGGCAGAGCAAGTGCCCCTGCCATGTCCCTGAGGTAGCTGGACCCTCAAACACTTaGTGGATCTGTTCCAACTGG +
Preference number: 4 (lower is better)
Translates to: GSVCPRQSKCPCHVPEVAGPSNT*WICSNW
Trigger: CCAGTTGGAACAGATCCAGCAAGTGTTTGAGGGTCC...AGCTACCTCAGGGACATGGCAGGGGCACTTGCTCTGCCTGGGACAGACACTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
CDS-3UTR GCA 90 bp TCCCACATGTCTCAAATTCACAGAGGAGGGTGTGTCTCCTGTGAGGCTGAAGTCGAGGCTGGCCAGGTATaGCAGGAGGTGGGGAAGGGG +
Preference number: 4 (lower is better)
Translates to: SHMSQIHRGGCVSCEAEVEAGQV*QEVGKG
Trigger: CCCCTTCCCCACCTCCTGGCATACCTGGCCAGCCTC...GACTTCAGCCTCACAGGAGACACACCCTCCTCTGTGAATTTGAGACATGTGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
CDS-3UTR GCA 90 bp CCTTGCAAAGTTTTGGCTGCTGGGGTCCCACATGTCTCAAATTCACAGAGGAGGGAGGCTGGCCAGGTATaGCAGGAGGTGGGGAAGGGG +
Preference number: 4 (lower is better)
Translates to: PCKVLAAGVPHVSNSQRREAGQV*QEVGKG
Trigger: CCCCTTCCCCACCTCCTGGCATACCTGGCCAGCCTC...CCTCCTCTGTGAATTTGAGACATGTGGGACCCCAGCAGCCAAAACTTTGCAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
CDS-3UTR CCA 90 bp CAAGTGGCAGTGCCCATGCTGAGCAGGTCCTCACGGCCGGGCAAATGCTGGGCATTGAAGCATTCGGTCTaGTTGCTCTTCCCTTTCTGG +
Preference number: 4 (lower is better)
Translates to: QVAVPMLSRSSRPGKCWALKHSV*LLFPFW
Trigger: CCAGAAAGGGAAGAGCAACCAGACCGAATGCTTCAA...TGCCCAGCATTTGCCCGGCCGTGAGGACCTGCTCAGCATGGGCACTGCCACTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
CDS-3UTR CCA 90 bp GCAGGTCCTCACGGCCGGGCAAATGCTGGGCAGTGTCTGTCCCAGGCAGAGCAACTTAGCTGGGTCATATaGGCATTTACCCTTCCCATC +
Preference number: 4 (lower is better)
Translates to: AGPHGRANAGQCLSQAEQLSWVI*AFTLPI
Trigger: GATGGGAAGGGTAAATGCCCATATGACCCAGCTAAG...TTGCTCTGCCTGGGACAGACACTGCCCAGCATTTGCCCGGCCGTGAGGACCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
CDS-3UTR CCA 90 bp GGCCGGGCAAATGCTGGGCAGTGTCTGTCCCAGGCAGAGCAAGTGCCCCTGCCAGCAGAGCCTACAAAGTaGGGTTCATTCAGCCAAAAA +
Preference number: 4 (lower is better)
Translates to: GRANAGQCLSQAEQVPLPAEPTK*GSFSQK
Trigger: TTTTTGGCTGAATGAACCCCACTTTGTAGGCTCTGC...TGGCAGGGGCACTTGCTCTGCCTGGGACAGACACTGCCCAGCATTTGCCCGGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
CDS-3UTR CCA 90 bp TCCCACATGTCTCAAATTCACAGAGGAGGGTGTGTCTCCTGTGAGGCTGAAGTCGGCACCATCAAGCCCTaGGACCCTGTCGGCCACCAC +
Preference number: 4 (lower is better)
Translates to: SHMSQIHRGGCVSCEAEVGTIKP*DPVGHH
Trigger: GTGGTGGCCGACAGGGTCCCAGGGCTTGATGGTGCC...GACTTCAGCCTCACAGGAGACACACCCTCCTCTGTGAATTTGAGACATGTGGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
CDS-3UTR CCA 90 bp GGCAGTGTCTGTCCCAGGCAGAGCAAGTGCCCCTGCCATGTCCCTGAGGTAGCTACAACACTGTATAGGTaGCACCATCAAGCCCTGGGA +
Preference number: 4 (lower is better)
Translates to: GSVCPRQSKCPCHVPEVATTLYR*HHQALG
Trigger: TCCCAGGGCTTGATGGTGCCACCTATACAGTGTTGT...AGCTACCTCAGGGACATGGCAGGGGCACTTGCTCTGCCTGGGACAGACACTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
CDS-3UTR CCA 90 bp CAAATGCTGGGCAGTGTCTGTCCCAGGCAGAGCAAGTGCCCCTGCCATGTCCCTAAATTGGACGAGAGGTaGCAGGGTAGGACCAGGTCT +
Preference number: 4 (lower is better)
Translates to: QMLGSVCPRQSKCPCHVPKLDER*QGRTRS
Trigger: AGACCTGGTCCTACCCTGCCACCTCTCGTCCAATTT...AGGGACATGGCAGGGGCACTTGCTCTGCCTGGGACAGACACTGCCCAGCATTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
CDS-3UTR CCA 90 bp TGTCCTTCCCTTCCCCGTATGTACATCACTGCCCCAAAGCTTGGGACAGCTGGGGGGCATGGGCCAAATTaGACGAGAGGTGGCAGGGTA +
Preference number: 4 (lower is better)
Translates to: CPSLPRMYITAPKLGTAGGHGPN*TRGGRV
Trigger: TACCCTGCCACCTCTCGTCCAATTTGGCCCATGCCC...CCCAGCTGTCCCAAGCTTTGGGGCAGTGATGTACATACGGGGAAGGGAAGGACA
58% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
CDS-3UTR CCA 90 bp TGGCTGCTGGGGTCCCACATGTCTCAAATTCACAGAGGAGGGTGTGTCTCCTGTGGAGAAGGCAGAGGCTaGCCAGGTATGCCAGGAGGT +
Preference number: 4 (lower is better)
Translates to: WLLGSHMSQIHRGGCVSCGEGRG*PGMPGG
Trigger: ACCTCCTGGCATACCTGGCCAGCCTCTGCCTTCTCC...ACAGGAGACACACCCTCCTCTGTGAATTTGAGACATGTGGGACCCCAGCAGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
CDS-3UTR TCA 90 bp TCACGGCCGGGCAAATGCTGGGCAGTGTCTGTCCCAGGCAGAGCAAGTGCCCCTCATCTCCTGTACCAATaGACAACACTGTATAGGTGG +
Preference number: 4 (lower is better)
Translates to: SRPGKCWAVSVPGRASAPHLLYQ*TTLYRW
Trigger: CCACCTATACAGTGTTGTTCATTGGTACAGGAGATG...AGGGGCACTTGCTCTGCCTGGGACAGACACTGCCCAGCATTTGCCCGGCCGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
CDS-3UTR TCA 90 bp ATGCTGAGCAGGTCCTCACGGCCGGGCAAATGCTGGGCAGTGTCTGTCCCAGGCCATCTCCTGTACCAATaGACAACACTGTATAGGTGG +
Preference number: 4 (lower is better)
Translates to: MLSRSSRPGKCWAVSVPGHLLYQ*TTLYRW
Trigger: CCACCTATACAGTGTTGTTCATTGGTACAGGAGATG...GCCTGGGACAGACACTGCCCAGCATTTGCCCGGCCGTGAGGACCTGCTCAGCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
CDS-3UTR GCA 90 bp TGGCTGCTGGGGTCCCACATGTCTCAAATTCACAGAGGAGGGTGTGTCTCCTGTTCAGGAAGTCCTGGATaGCTGTCTGGGAGAACCGCC +
Preference number: 4 (lower is better)
Translates to: WLLGSHMSQIHRGGCVSCSGSPG*LSGRTA
Trigger: GGCGGTTCTCCCAGACAGGCATCCAGGACTTCCTGA...ACAGGAGACACACCCTCCTCTGTGAATTTGAGACATGTGGGACCCCAGCAGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
CDS-3UTR GCA 90 bp TCAGAAGAGCGCAAATATAAAATACCACCGAACCCGGAGGGCAAGTGGGAGGCCAAGAAGGTGGTGTTGTaGCAAGAGGCGCCCCGCAGG +
Preference number: 4 (lower is better)
Translates to: SEERKYKIPPNPEGKWEAKKVVL*QEAPRR
Trigger: CCTGCGGGGCGCCTCTTGGCACAACACCACCTTCTT...GGCCTCCCACTTGCCCTCCGGGTTCGGTGGTATTTTATATTTGCGCTCTTCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
CDS-3UTR GCA 90 bp GGTCCCACATGTCTCAAATTCACAGAGGAGGGTGTGTCTCCTGTGAGGCTGAAGGGAGCCAGGTTGTTCTaGAGGCAGGTCCTGGCTTCC +
Preference number: 4 (lower is better)
Translates to: GPTCLKFTEEGVSPVRLKGARLF*RQVLAS
Trigger: GGAAGCCAGGACCTGCCTGCAGAACAACCTGGCTCC...CTTCAGCCTCACAGGAGACACACCCTCCTCTGTGAATTTGAGACATGTGGGACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
CDS-3UTR CCA 90 bp GGCAGTGTCTGTCCCAGGCAGAGCAAGTGCCCCTGCCATGTCCCTGAGGTAGCTCCCTCAAACACTTGCTaGATCTGTTCCAACTGGTAC +
Preference number: 4 (lower is better)
Translates to: GSVCPRQSKCPCHVPEVAPSNTC*ICSNWY
Trigger: GTACCAGTTGGAACAGATCCAGCAAGTGTTTGAGGG...AGCTACCTCAGGGACATGGCAGGGGCACTTGCTCTGCCTGGGACAGACACTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
CDS-3UTR CCA 90 bp AACCCTTCCCAGCCCTGTCAGAAGAGCGCAAATATAAAATACCACCGAACCCGGAGCGACCACTGGTGGTaGCCACACAGCGGCTGGTGT +
Preference number: 4 (lower is better)
Translates to: NPSQPCQKSANIKYHRTRSDHWW*PHSGWC
Trigger: ACACCAGCCGCTGTGTGGCCACCACCAGTGGTCGCT...CCGGGTTCGGTGGTATTTTATATTTGCGCTCTTCTGACAGGGCTGGGAAGGGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
CDS-3UTR CCA 90 bp TGGCTGCTGGGGTCCCACATGTCTCAAATTCACAGAGGAGGGTGTGTCTCCTGTGGGCATGGGCCAAATTaGACGAGAGGTGGCAGGGTA +
Preference number: 4 (lower is better)
Translates to: WLLGSHMSQIHRGGCVSCGHGPN*TRGGRV
Trigger: TACCCTGCCACCTCTCGTCCAATTTGGCCCATGCCC...ACAGGAGACACACCCTCCTCTGTGAATTTGAGACATGTGGGACCCCAGCAGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
CDS-3UTR CCA 90 bp TGTCCTTCCCTTCCCCGTATGTACATCACTGCCCCAAAGCTTGGGACAGCTGGGCTTCCGAAGGTCCAGTaGGCATGGGCCAAATTGGAC +
Preference number: 4 (lower is better)
Translates to: CPSLPRMYITAPKLGTAGLPKVQ*AWAKLD
Trigger: GTCCAATTTGGCCCATGCCCACTGGACCTTCGGAAG...CCCAGCTGTCCCAAGCTTTGGGGCAGTGATGTACATACGGGGAAGGGAAGGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
CDS-3UTR CCA 90 bp GGCAGTGTCTGTCCCAGGCAGAGCAAGTGCCCCTGCCATGTCCCTGAGGTAGCTTCCTCTCAGATGCCTTaGCACCCTTTTCTAGCTCTT +
Preference number: 4 (lower is better)
Translates to: GSVCPRQSKCPCHVPEVASSQMP*HPFLAL
Trigger: AAGAGCTAGAAAAGGGTGCCAAGGCATCTGAGAGGA...AGCTACCTCAGGGACATGGCAGGGGCACTTGCTCTGCCTGGGACAGACACTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
CDS-3UTR CCA 90 bp GGTCCCACATGTCTCAAATTCACAGAGGAGGGTGTGTCTCCTGTGAGGCTGAAGGGAGAAGGCAGAGGCTaGCCAGGTATGCCAGGAGGT +
Preference number: 4 (lower is better)
Translates to: GPTCLKFTEEGVSPVRLKGEGRG*PGMPGG
Trigger: ACCTCCTGGCATACCTGGCCAGCCTCTGCCTTCTCC...CTTCAGCCTCACAGGAGACACACCCTCCTCTGTGAATTTGAGACATGTGGGACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
CDS-3UTR CCA 90 bp CCCTTCCCAGCCCTGTCAGAAGAGCGCAAATATAAAATACCACCGAACCCGGAGCGACCACCTCCTAGGTaGAGCCGAGTTGGAGAAGGC +
Preference number: 4 (lower is better)
Translates to: PFPALSEERKYKIPPNPERPPPR*SRVGEG
Trigger: GCCTTCTCCAACTCGGCTCCACCTAGGAGGTGGTCG...CTCCGGGTTCGGTGGTATTTTATATTTGCGCTCTTCTGACAGGGCTGGGAAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
CDS-3UTR CCA 90 bp GGTCCCACATGTCTCAAATTCACAGAGGAGGGTGTGTCTCCTGTGAGGCTGAAGCGACCACCTCCTAGGTaGAGCCGAGTTGGAGAAGGC +
Preference number: 4 (lower is better)
Translates to: GPTCLKFTEEGVSPVRLKRPPPR*SRVGEG
Trigger: GCCTTCTCCAACTCGGCTCCACCTAGGAGGTGGTCG...CTTCAGCCTCACAGGAGACACACCCTCCTCTGTGAATTTGAGACATGTGGGACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
CDS-3UTR CCA 90 bp ATGCTGAGCAGGTCCTCACGGCCGGGCAAATGCTGGGCAGTGTCTGTCCCAGGCAACGCACATAACCATTaGCATTTGAGTTCCGACCAC +
Preference number: 4 (lower is better)
Translates to: MLSRSSRPGKCWAVSVPGNAHNH*HLSSDH
Trigger: GTGGTCGGAACTCAAATGCCAATGGTTATGTGCGTT...GCCTGGGACAGACACTGCCCAGCATTTGCCCGGCCGTGAGGACCTGCTCAGCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
CDS-3UTR CCA 90 bp GCAGGTCCTCACGGCCGGGCAAATGCTGGGCAGTGTCTGTCCCAGGCAGAGCAAAACGCACATAACCATTaGCATTTGAGTTCCGACCAC +
Preference number: 4 (lower is better)
Translates to: AGPHGRANAGQCLSQAEQNAHNH*HLSSDH
Trigger: GTGGTCGGAACTCAAATGCCAATGGTTATGTGCGTT...TTGCTCTGCCTGGGACAGACACTGCCCAGCATTTGCCCGGCCGTGAGGACCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
CDS-3UTR TCA 90 bp CAAATGCTGGGCAGTGTCTGTCCCAGGCAGAGCAAGTGCCCCTGCCATGTCCCTGAGGAATTGTATGGCTaGAGGAAGCGGATGAAGTTG +
Preference number: 4 (lower is better)
Translates to: QMLGSVCPRQSKCPCHVPEELYG*RKRMKL
Trigger: CAACTTCATCCGCTTCCTTCAGCCATACAATTCCTC...AGGGACATGGCAGGGGCACTTGCTCTGCCTGGGACAGACACTGCCCAGCATTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
CDS-3UTR GCA 90 bp AACCCTTCCCAGCCCTGTCAGAAGAGCGCAAATATAAAATACCACCGAACCCGGAAGAAGGTGGTGTTGTaGCAAGAGGCGCCCCGCAGG +
Preference number: 4 (lower is better)
Translates to: NPSQPCQKSANIKYHRTRKKVVL*QEAPRR
Trigger: CCTGCGGGGCGCCTCTTGGCACAACACCACCTTCTT...CCGGGTTCGGTGGTATTTTATATTTGCGCTCTTCTGACAGGGCTGGGAAGGGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
CDS-3UTR CCA 90 bp TCCCACATGTCTCAAATTCACAGAGGAGGGTGTGTCTCCTGTGAGGCTGAAGTCAACCAGGCCGAGGGCTaGGTACCGGGTCAGTATAGC +
Preference number: 4 (lower is better)
Translates to: SHMSQIHRGGCVSCEAEVNQAEG*VPGQYS
Trigger: GCTATACTGACCCGGTACCCAGCCCTCGGCCTGGTT...GACTTCAGCCTCACAGGAGACACACCCTCCTCTGTGAATTTGAGACATGTGGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
CDS-3UTR CCA 90 bp AACCCTTCCCAGCCCTGTCAGAAGAGCGCAAATATAAAATACCACCGAACCCGGAACCAGGCCGAGGGCTaGGTACCGGGTCAGTATAGC +
Preference number: 4 (lower is better)
Translates to: NPSQPCQKSANIKYHRTRNQAEG*VPGQYS
Trigger: GCTATACTGACCCGGTACCCAGCCCTCGGCCTGGTT...CCGGGTTCGGTGGTATTTTATATTTGCGCTCTTCTGACAGGGCTGGGAAGGGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
CDS-3UTR CCA 90 bp TCCCACATGTCTCAAATTCACAGAGGAGGGTGTGTCTCCTGTGAGGCTGAAGTCTCTGCAGGCAGGTCCTaGCTTCCGAAGGTCCAGTGG +
Preference number: 4 (lower is better)
Translates to: SHMSQIHRGGCVSCEAEVSAGRS*LPKVQW
Trigger: CCACTGGACCTTCGGAAGCCAGGACCTGCCTGCAGA...GACTTCAGCCTCACAGGAGACACACCCTCCTCTGTGAATTTGAGACATGTGGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
CDS-3UTR CCA 90 bp GGCAGTGTCTGTCCCAGGCAGAGCAAGTGCCCCTGCCATGTCCCTGAGGTAGCTAACGCACATAACCATTaGCATTTGAGTTCCGACCAC +
Preference number: 4 (lower is better)
Translates to: GSVCPRQSKCPCHVPEVANAHNH*HLSSDH
Trigger: GTGGTCGGAACTCAAATGCCAATGGTTATGTGCGTT...AGCTACCTCAGGGACATGGCAGGGGCACTTGCTCTGCCTGGGACAGACACTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
CDS-3UTR TCA 90 bp CCCTTCCCAGCCCTGTCAGAAGAGCGCAAATATAAAATACCACCGAACCCGGAGTGTCATCGTCTCCCGTaGAGCTTCCCACACTCTCAG +
Preference number: 4 (lower is better)
Translates to: PFPALSEERKYKIPPNPECHRLP*SFPHSQ
Trigger: CTGAGAGTGTGGGAAGCTTCACGGGAGACGATGACA...CTCCGGGTTCGGTGGTATTTTATATTTGCGCTCTTCTGACAGGGCTGGGAAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
CDS-3UTR GCA 90 bp AAGGGAAGACGTGATAGAGACAGGAAAGTTACAACACACACACACACACACACAGCCCCACAGCCCTGCTaGCAGCAGCCAGACAGCCCA +
Preference number: 4 (lower is better)
Translates to: KGRRDRDRKVTTHTHTHTAPQPC*QQPDSP
Trigger: TGGGCTGTCTGGCTGCTGGCAGCAGGGCTGTGGGGC...TGTGTGTGTGTGTGTGTGTGTTGTAACTTTCCTGTCTCTATCACGTCTTCCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
CDS-3UTR GCA 90 bp AACCCTTCCCAGCCCTGTCAGAAGAGCGCAAATATAAAATACCACCGAACCCGGTCAGGAAGTCCTGGATaGCTGTCTGGGAGAACCGCC +
Preference number: 4 (lower is better)
Translates to: NPSQPCQKSANIKYHRTRSGSPG*LSGRTA
Trigger: GGCGGTTCTCCCAGACAGGCATCCAGGACTTCCTGA...CCGGGTTCGGTGGTATTTTATATTTGCGCTCTTCTGACAGGGCTGGGAAGGGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
CDS-3UTR GCA 90 bp TCCCACATGTCTCAAATTCACAGAGGAGGGTGTGTCTCCTGTGAGGCTGAAGTCTCAGGAAGTCCTGGATaGCTGTCTGGGAGAACCGCC +
Preference number: 4 (lower is better)
Translates to: SHMSQIHRGGCVSCEAEVSGSPG*LSGRTA
Trigger: GGCGGTTCTCCCAGACAGGCATCCAGGACTTCCTGA...GACTTCAGCCTCACAGGAGACACACCCTCCTCTGTGAATTTGAGACATGTGGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
CDS-3UTR GCA 90 bp TGTCCTTCCCTTCCCCGTATGTACATCACTGCCCCAAAGCTTGGGACAGCTGGGGCAGTCATACTCCACTaGCCGCTCACTGAAGAAGAA +
Preference number: 4 (lower is better)
Translates to: CPSLPRMYITAPKLGTAGAVILH*PLTEEE
Trigger: TTCTTCTTCAGTGAGCGGGCAGTGGAGTATGACTGC...CCCAGCTGTCCCAAGCTTTGGGGCAGTGATGTACATACGGGGAAGGGAAGGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
CDS-3UTR GCA 90 bp TGTCCTTCCCTTCCCCGTATGTACATCACTGCCCCAAAGCTTGGGACAGCTGGGCTGGTACTCACAAACTaGAGACAGGTCCATATCGCC +
Preference number: 4 (lower is better)
Translates to: CPSLPRMYITAPKLGTAGLVLTN*RQVHIA
Trigger: GGCGATATGGACCTGTCTGCAGTTTGTGAGTACCAG...CCCAGCTGTCCCAAGCTTTGGGGCAGTGATGTACATACGGGGAAGGGAAGGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
CDS-3UTR CCA 90 bp GTTTTGGCTGCTGGGGTCCCACATGTCTCAAATTCACAGAGGAGGGTGTGTCTCAAACCCCGAAGAAGGTaGTGTTGTGCCAAGAGGCGC +
Preference number: 4 (lower is better)
Translates to: VLAAGVPHVSNSQRRVCLKPRRR*CCAKRR
Trigger: GCGCCTCTTGGCACAACACCACCTTCTTCGGGGTTT...GAGACACACCCTCCTCTGTGAATTTGAGACATGTGGGACCCCAGCAGCCAAAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
CDS-3UTR CCA 90 bp CCCTTCCCAGCCCTGTCAGAAGAGCGCAAATATAAAATACCACCGAACCCGGAGAAACCCCGAAGAAGGTaGTGTTGTGCCAAGAGGCGC +
Preference number: 4 (lower is better)
Translates to: PFPALSEERKYKIPPNPEKPRRR*CCAKRR
Trigger: GCGCCTCTTGGCACAACACCACCTTCTTCGGGGTTT...CTCCGGGTTCGGTGGTATTTTATATTTGCGCTCTTCTGACAGGGCTGGGAAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
CDS-3UTR CCA 90 bp TGGCTGCTGGGGTCCCACATGTCTCAAATTCACAGAGGAGGGTGTGTCTCCTGTAAGTTCGCCACATGTTaGACCAGAAAGGACCCCGAG +
Preference number: 4 (lower is better)
Translates to: WLLGSHMSQIHRGGCVSCKFATC*TRKDPE
Trigger: CTCGGGGTCCTTTCTGGTCCAACATGTGGCGAACTT...ACAGGAGACACACCCTCCTCTGTGAATTTGAGACATGTGGGACCCCAGCAGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
CDS-3UTR CCA 90 bp CAAATGCTGGGCAGTGTCTGTCCCAGGCAGAGCAAGTGCCCCTGCCATGTCCCTAACGCACATAACCATTaGCATTTGAGTTCCGACCAC +
Preference number: 4 (lower is better)
Translates to: QMLGSVCPRQSKCPCHVPNAHNH*HLSSDH
Trigger: GTGGTCGGAACTCAAATGCCAATGGTTATGTGCGTT...AGGGACATGGCAGGGGCACTTGCTCTGCCTGGGACAGACACTGCCCAGCATTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
CDS-3UTR TCA 90 bp GTTTTGGCTGCTGGGGTCCCACATGTCTCAAATTCACAGAGGAGGGTGTGTCTCGTTATTGAGTGTGGCTaGGTACAGCTCACCGTCCAC +
Preference number: 4 (lower is better)
Translates to: VLAAGVPHVSNSQRRVCLVIECG*VQLTVH
Trigger: GTGGACGGTGAGCTGTACTCAGCCACACTCAATAAC...GAGACACACCCTCCTCTGTGAATTTGAGACATGTGGGACCCCAGCAGCCAAAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
CDS-3UTR TCA 90 bp TGGCTGCTGGGGTCCCACATGTCTCAAATTCACAGAGGAGGGTGTGTCTCCTGTGACCAGGCACAATCTTaGGAGAGCCATCCGAATAGT +
Preference number: 4 (lower is better)
Translates to: WLLGSHMSQIHRGGCVSCDQAQS*ESHPNS
Trigger: ACTATTCGGATGGCTCTCTCAAGATTGTGCCTGGTC...ACAGGAGACACACCCTCCTCTGTGAATTTGAGACATGTGGGACCCCAGCAGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
CDS-3UTR GCA 90 bp GTTTTGGCTGCTGGGGTCCCACATGTCTCAAATTCACAGAGGAGGGTGTGTCTCCAAGAGATCGCTCCTTaGAGCTCCAGAGCCTCTACA +
Preference number: 4 (lower is better)
Translates to: VLAAGVPHVSNSQRRVCLQEIAP*SSRAST
Trigger: TGTAGAGGCTCTGGAGCTGCAAGGAGCGATCTCTTG...GAGACACACCCTCCTCTGTGAATTTGAGACATGTGGGACCCCAGCAGCCAAAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
CDS-3UTR GCA 90 bp TCAGAAGAGCGCAAATATAAAATACCACCGAACCCGGAGGGCAAGTGGGAGGCCCAAGAGATCGCTCCTTaGAGCTCCAGAGCCTCTACA +
Preference number: 4 (lower is better)
Translates to: SEERKYKIPPNPEGKWEAQEIAP*SSRAST
Trigger: TGTAGAGGCTCTGGAGCTGCAAGGAGCGATCTCTTG...GGCCTCCCACTTGCCCTCCGGGTTCGGTGGTATTTTATATTTGCGCTCTTCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
CDS-3UTR GCA 90 bp AAGGGAAGACGTGATAGAGACAGGAAAGTTACAACACACACACACACACACACAGAGGCTGGCCAGGTATaGCAGGAGGTGGGGAAGGGG +
Preference number: 4 (lower is better)
Translates to: KGRRDRDRKVTTHTHTHTEAGQV*QEVGKG
Trigger: CCCCTTCCCCACCTCCTGGCATACCTGGCCAGCCTC...TGTGTGTGTGTGTGTGTGTGTTGTAACTTTCCTGTCTCTATCACGTCTTCCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
CDS-3UTR CCA 90 bp TCAGAAGAGCGCAAATATAAAATACCACCGAACCCGGAGGGCAAGTGGGAGGCCAAGTTCGCCACATGTTaGACCAGAAAGGACCCCGAG +
Preference number: 4 (lower is better)
Translates to: SEERKYKIPPNPEGKWEAKFATC*TRKDPE
Trigger: CTCGGGGTCCTTTCTGGTCCAACATGTGGCGAACTT...GGCCTCCCACTTGCCCTCCGGGTTCGGTGGTATTTTATATTTGCGCTCTTCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
CDS-3UTR CCA 90 bp TCCCACATGTCTCAAATTCACAGAGGAGGGTGTGTCTCCTGTGAGGCTGAAGTCCTTCCGAAGGTCCAGTaGGCATGGGCCAAATTGGAC +
Preference number: 4 (lower is better)
Translates to: SHMSQIHRGGCVSCEAEVLPKVQ*AWAKLD
Trigger: GTCCAATTTGGCCCATGCCCACTGGACCTTCGGAAG...GACTTCAGCCTCACAGGAGACACACCCTCCTCTGTGAATTTGAGACATGTGGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
CDS-3UTR CCA 90 bp AGAGACAGGAAAGTTACAACACACACACACACACACACACATTCTTCCACATGCCGCGAGCTCAGGCAGTaGGTGCCCAGATCCTCCTCG +
Preference number: 4 (lower is better)
Translates to: RDRKVTTHTHTHTHSSTCRELRQ*VPRSSS
Trigger: CGAGGAGGATCTGGGCACCCACTGCCTGAGCTCGCG...GCATGTGGAAGAATGTGTGTGTGTGTGTGTGTGTGTTGTAACTTTCCTGTCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
CDS-3UTR TCA 90 bp AACCCTTCCCAGCCCTGTCAGAAGAGCGCAAATATAAAATACCACCGAACCCGGGTTATTGAGTGTGGCTaGGTACAGCTCACCGTCCAC +
Preference number: 4 (lower is better)
Translates to: NPSQPCQKSANIKYHRTRVIECG*VQLTVH
Trigger: GTGGACGGTGAGCTGTACTCAGCCACACTCAATAAC...CCGGGTTCGGTGGTATTTTATATTTGCGCTCTTCTGACAGGGCTGGGAAGGGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
CDS-3UTR TCA 90 bp TGTCCTTCCCTTCCCCGTATGTACATCACTGCCCCAAAGCTTGGGACAGCTGGGCATCTCCTGTACCAATaGACAACACTGTATAGGTGG +
Preference number: 4 (lower is better)
Translates to: CPSLPRMYITAPKLGTAGHLLYQ*TTLYRW
Trigger: CCACCTATACAGTGTTGTTCATTGGTACAGGAGATG...CCCAGCTGTCCCAAGCTTTGGGGCAGTGATGTACATACGGGGAAGGGAAGGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
CDS-3UTR TCA 90 bp CCCTTCCCAGCCCTGTCAGAAGAGCGCAAATATAAAATACCACCGAACCCGGAGGACCAGGCACAATCTTaGGAGAGCCATCCGAATAGT +
Preference number: 4 (lower is better)
Translates to: PFPALSEERKYKIPPNPEDQAQS*ESHPNS
Trigger: ACTATTCGGATGGCTCTCTCAAGATTGTGCCTGGTC...CTCCGGGTTCGGTGGTATTTTATATTTGCGCTCTTCTGACAGGGCTGGGAAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
CDS-3UTR TCA 90 bp GTTTTGGCTGCTGGGGTCCCACATGTCTCAAATTCACAGAGGAGGGTGTGTCTCGACCAGGCACAATCTTaGGAGAGCCATCCGAATAGT +
Preference number: 4 (lower is better)
Translates to: VLAAGVPHVSNSQRRVCLDQAQS*ESHPNS
Trigger: ACTATTCGGATGGCTCTCTCAAGATTGTGCCTGGTC...GAGACACACCCTCCTCTGTGAATTTGAGACATGTGGGACCCCAGCAGCCAAAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
CDS-3UTR TCA 90 bp AAGGGAAGACGTGATAGAGACAGGAAAGTTACAACACACACACACACACACACAGGCTGGCACCGGGCGTaGCCAGGCACAATCTTGAGA +
Preference number: 4 (lower is better)
Translates to: KGRRDRDRKVTTHTHTHTGWHRA*PGTILR
Trigger: TCTCAAGATTGTGCCTGGTCACGCCCGGTGCCAGCC...TGTGTGTGTGTGTGTGTGTGTTGTAACTTTCCTGTCTCTATCACGTCTTCCCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
CDS-3UTR GCA 90 bp TCCCACATGTCTCAAATTCACAGAGGAGGGTGTGTCTCCTGTGAGGCTGAAGTCCAAGAGATCGCTCCTTaGAGCTCCAGAGCCTCTACA +
Preference number: 4 (lower is better)
Translates to: SHMSQIHRGGCVSCEAEVQEIAP*SSRAST
Trigger: TGTAGAGGCTCTGGAGCTGCAAGGAGCGATCTCTTG...GACTTCAGCCTCACAGGAGACACACCCTCCTCTGTGAATTTGAGACATGTGGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
CDS-3UTR GCA 90 bp GGTCCCACATGTCTCAAATTCACAGAGGAGGGTGTGTCTCCTGTGAGGCTGAAGAGCATTCGGTCTGGTTaGTCTTCCCTTTCTGGGTAC +
Preference number: 4 (lower is better)
Translates to: GPTCLKFTEEGVSPVRLKSIRSG*SSLSGY
Trigger: GTACCCAGAAAGGGAAGAGCAACCAGACCGAATGCT...CTTCAGCCTCACAGGAGACACACCCTCCTCTGTGAATTTGAGACATGTGGGACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
CDS-3UTR GCA 90 bp TCAGAAGAGCGCAAATATAAAATACCACCGAACCCGGAGGGCAAGTGGGAGGCCCCCATCCTCAAATTCTaGACGGTCCAAGGTGAACGT +
Preference number: 4 (lower is better)
Translates to: SEERKYKIPPNPEGKWEAPILKF*TVQGER
Trigger: ACGTTCACCTTGGACCGTGCAGAATTTGAGGATGGG...GGCCTCCCACTTGCCCTCCGGGTTCGGTGGTATTTTATATTTGCGCTCTTCTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
CDS-3UTR GCA 90 bp GTTTTGGCTGCTGGGGTCCCACATGTCTCAAATTCACAGAGGAGGGTGTGTCTCGCAGTCATACTCCACTaGCCGCTCACTGAAGAAGAA +
Preference number: 4 (lower is better)
Translates to: VLAAGVPHVSNSQRRVCLAVILH*PLTEEE
Trigger: TTCTTCTTCAGTGAGCGGGCAGTGGAGTATGACTGC...GAGACACACCCTCCTCTGTGAATTTGAGACATGTGGGACCCCAGCAGCCAAAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
CDS-3UTR GCA 90 bp GTTTTGGCTGCTGGGGTCCCACATGTCTCAAATTCACAGAGGAGGGTGTGTCTCCTGGTACTCACAAACTaGAGACAGGTCCATATCGCC +
Preference number: 4 (lower is better)
Translates to: VLAAGVPHVSNSQRRVCLLVLTN*RQVHIA
Trigger: GGCGATATGGACCTGTCTGCAGTTTGTGAGTACCAG...GAGACACACCCTCCTCTGTGAATTTGAGACATGTGGGACCCCAGCAGCCAAAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
CDS-3UTR GCA 90 bp TCAGAAGAGCGCAAATATAAAATACCACCGAACCCGGAGGGCAAGTGGGAGGCCTCCTCCATCAGGGGGTaGTTCTTGATGAAGTTGAGG +
Preference number: 4 (lower is better)
Translates to: SEERKYKIPPNPEGKWEASSIRG*FLMKLR
Trigger: CCTCAACTTCATCAAGAAGCACCCCCTGATGGAGGA...GGCCTCCCACTTGCCCTCCGGGTTCGGTGGTATTTTATATTTGCGCTCTTCTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
CDS-3UTR GCA 90 bp GTTTTGGCTGCTGGGGTCCCACATGTCTCAAATTCACAGAGGAGGGTGTGTCTCAACAAGGTAGCTTTCTaGAGCCAGTCTTGTCCCCTG +
Preference number: 4 (lower is better)
Translates to: VLAAGVPHVSNSQRRVCLNKVAF*SQSCPL
Trigger: CAGGGGACAAGACTGGCTGCAGAAAGCTACCTTGTT...GAGACACACCCTCCTCTGTGAATTTGAGACATGTGGGACCCCAGCAGCCAAAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
CDS-3UTR CCA 90 bp TGTCCTTCCCTTCCCCGTATGTACATCACTGCCCCAAAGCTTGGGACAGCTGGGGCAGAGCCTACAAAGTaGGGTTCATTCAGCCAAAAA +
Preference number: 4 (lower is better)
Translates to: CPSLPRMYITAPKLGTAGAEPTK*GSFSQK
Trigger: TTTTTGGCTGAATGAACCCCACTTTGTAGGCTCTGC...CCCAGCTGTCCCAAGCTTTGGGGCAGTGATGTACATACGGGGAAGGGAAGGACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
CDS-3UTR CCA 90 bp TGGCTGCTGGGGTCCCACATGTCTCAAATTCACAGAGGAGGGTGTGTCTCCTGTCCCTCAAACACTTGCTaGATCTGTTCCAACTGGTAC +
Preference number: 4 (lower is better)
Translates to: WLLGSHMSQIHRGGCVSCPSNTC*ICSNWY
Trigger: GTACCAGTTGGAACAGATCCAGCAAGTGTTTGAGGG...ACAGGAGACACACCCTCCTCTGTGAATTTGAGACATGTGGGACCCCAGCAGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
CDS-3UTR CCA 90 bp GTTTTGGCTGCTGGGGTCCCACATGTCTCAAATTCACAGAGGAGGGTGTGTCTCACAACACTGTATAGGTaGCACCATCAAGCCCTGGGA +
Preference number: 4 (lower is better)
Translates to: VLAAGVPHVSNSQRRVCLTTLYR*HHQALG
Trigger: TCCCAGGGCTTGATGGTGCCACCTATACAGTGTTGT...GAGACACACCCTCCTCTGTGAATTTGAGACATGTGGGACCCCAGCAGCCAAAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
CDS-3UTR CCA 90 bp TCCCACATGTCTCAAATTCACAGAGGAGGGTGTGTCTCCTGTGAGGCTGAAGTCCACCAGACTTTCCACTaGCTCCTGGTCAAACACCTG +
Preference number: 4 (lower is better)
Translates to: SHMSQIHRGGCVSCEAEVHQTFH*LLVKHL
Trigger: CAGGTGTTTGACCAGGAGCCAGTGGAAAGTCTGGTG...GACTTCAGCCTCACAGGAGACACACCCTCCTCTGTGAATTTGAGACATGTGGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
CDS-3UTR CCA 90 bp AACCCTTCCCAGCCCTGTCAGAAGAGCGCAAATATAAAATACCACCGAACCCGGCACCAGACTTTCCACTaGCTCCTGGTCAAACACCTG +
Preference number: 4 (lower is better)
Translates to: NPSQPCQKSANIKYHRTRHQTFH*LLVKHL
Trigger: CAGGTGTTTGACCAGGAGCCAGTGGAAAGTCTGGTG...CCGGGTTCGGTGGTATTTTATATTTGCGCTCTTCTGACAGGGCTGGGAAGGGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
CDS-3UTR CCA 90 bp CCTTGCAAAGTTTTGGCTGCTGGGGTCCCACATGTCTCAAATTCACAGAGGAGGAAATTGGACGAGAGGTaGCAGGGTAGGACCAGGTCT +
Preference number: 4 (lower is better)
Translates to: PCKVLAAGVPHVSNSQRRKLDER*QGRTRS
Trigger: AGACCTGGTCCTACCCTGCCACCTCTCGTCCAATTT...CCTCCTCTGTGAATTTGAGACATGTGGGACCCCAGCAGCCAAAACTTTGCAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
CDS-3UTR TCA 90 bp GTTTTGGCTGCTGGGGTCCCACATGTCTCAAATTCACAGAGGAGGGTGTGTCTCGAGGAATTGTATGGCTaGAGGAAGCGGATGAAGTTG +
Preference number: 4 (lower is better)
Translates to: VLAAGVPHVSNSQRRVCLEELYG*RKRMKL
Trigger: CAACTTCATCCGCTTCCTTCAGCCATACAATTCCTC...GAGACACACCCTCCTCTGTGAATTTGAGACATGTGGGACCCCAGCAGCCAAAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
CDS-3UTR GCA 90 bp AACCCTTCCCAGCCCTGTCAGAAGAGCGCAAATATAAAATACCACCGAACCCGGAGCATTCGGTCTGGTTaGTCTTCCCTTTCTGGGTAC +
Preference number: 4 (lower is better)
Translates to: NPSQPCQKSANIKYHRTRSIRSG*SSLSGY
Trigger: GTACCCAGAAAGGGAAGAGCAACCAGACCGAATGCT...CCGGGTTCGGTGGTATTTTATATTTGCGCTCTTCTGACAGGGCTGGGAAGGGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
CDS-3UTR GCA 90 bp AACCCTTCCCAGCCCTGTCAGAAGAGCGCAAATATAAAATACCACCGAACCCGGGCAGTCATACTCCACTaGCCGCTCACTGAAGAAGAA +
Preference number: 4 (lower is better)
Translates to: NPSQPCQKSANIKYHRTRAVILH*PLTEEE
Trigger: TTCTTCTTCAGTGAGCGGGCAGTGGAGTATGACTGC...CCGGGTTCGGTGGTATTTTATATTTGCGCTCTTCTGACAGGGCTGGGAAGGGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
CDS-3UTR GCA 90 bp AACCCTTCCCAGCCCTGTCAGAAGAGCGCAAATATAAAATACCACCGAACCCGGCTGGTACTCACAAACTaGAGACAGGTCCATATCGCC +
Preference number: 4 (lower is better)
Translates to: NPSQPCQKSANIKYHRTRLVLTN*RQVHIA
Trigger: GGCGATATGGACCTGTCTGCAGTTTGTGAGTACCAG...CCGGGTTCGGTGGTATTTTATATTTGCGCTCTTCTGACAGGGCTGGGAAGGGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
CDS-3UTR GCA 90 bp CCTTGCAAAGTTTTGGCTGCTGGGGTCCCACATGTCTCAAATTCACAGAGGAGGGGACCCTCAAACACTTaGTGGATCTGTTCCAACTGG +
Preference number: 4 (lower is better)
Translates to: PCKVLAAGVPHVSNSQRRGPSNT*WICSNW
Trigger: CCAGTTGGAACAGATCCAGCAAGTGTTTGAGGGTCC...CCTCCTCTGTGAATTTGAGACATGTGGGACCCCAGCAGCCAAAACTTTGCAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
CDS-3UTR GCA 90 bp TCCCACATGTCTCAAATTCACAGAGGAGGGTGTGTCTCCTGTGAGGCTGAAGTCTCCTCCATCAGGGGGTaGTTCTTGATGAAGTTGAGG +
Preference number: 4 (lower is better)
Translates to: SHMSQIHRGGCVSCEAEVSSIRG*FLMKLR
Trigger: CCTCAACTTCATCAAGAAGCACCCCCTGATGGAGGA...GACTTCAGCCTCACAGGAGACACACCCTCCTCTGTGAATTTGAGACATGTGGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
CDS-3UTR GCA 90 bp AGAGACAGGAAAGTTACAACACACACACACACACACACACATTCTTCCACATGCGGAGCCAGGTTGTTCTaGAGGCAGGTCCTGGCTTCC +
Preference number: 4 (lower is better)
Translates to: RDRKVTTHTHTHTHSSTCGARLF*RQVLAS
Trigger: GGAAGCCAGGACCTGCCTGCAGAACAACCTGGCTCC...GCATGTGGAAGAATGTGTGTGTGTGTGTGTGTGTGTTGTAACTTTCCTGTCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
CDS-3UTR CCA 90 bp CCTTGCAAAGTTTTGGCTGCTGGGGTCCCACATGTCTCAAATTCACAGAGGAGGGGTGTGACCCTTAGCTaGGTCATATGGGCATTTACC +
Preference number: 4 (lower is better)
Translates to: PCKVLAAGVPHVSNSQRRGVTLS*VIWAFT
Trigger: GGTAAATGCCCATATGACCCAGCTAAGGGTCACACC...CCTCCTCTGTGAATTTGAGACATGTGGGACCCCAGCAGCCAAAACTTTGCAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
CDS-3UTR CCA 90 bp GTTTTGGCTGCTGGGGTCCCACATGTCTCAAATTCACAGAGGAGGGTGTGTCTCCCCTCAAACACTTGCTaGATCTGTTCCAACTGGTAC +
Preference number: 4 (lower is better)
Translates to: VLAAGVPHVSNSQRRVCLPSNTC*ICSNWY
Trigger: GTACCAGTTGGAACAGATCCAGCAAGTGTTTGAGGG...GAGACACACCCTCCTCTGTGAATTTGAGACATGTGGGACCCCAGCAGCCAAAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
CDS-3UTR CCA 90 bp AAGGGAAGACGTGATAGAGACAGGAAAGTTACAACACACACACACACACACACAAACCGAGGCTTCACCTaGTCCTCCATCAGGGGGTGC +
Preference number: 4 (lower is better)
Translates to: KGRRDRDRKVTTHTHTHTNRGFT*SSIRGC
Trigger: GCACCCCCTGATGGAGGACCAGGTGAAGCCTCGGTT...TGTGTGTGTGTGTGTGTGTGTTGTAACTTTCCTGTCTCTATCACGTCTTCCCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
CDS-3UTR CCA 90 bp AAGGGAAGACGTGATAGAGACAGGAAAGTTACAACACACACACACACACACACAAGTTCCTCCACCATGTaGATCCAGGGCCCCAGGCTC +
Preference number: 4 (lower is better)
Translates to: KGRRDRDRKVTTHTHTHTSSSTM*IQGPRL
Trigger: GAGCCTGGGGCCCTGGATCCACATGGTGGAGGAACT...TGTGTGTGTGTGTGTGTGTGTTGTAACTTTCCTGTCTCTATCACGTCTTCCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
CDS-3UTR CCA 90 bp AAGGGAAGACGTGATAGAGACAGGAAAGTTACAACACACACACACACACACACAGGAGAAGGCAGAGGCTaGCCAGGTATGCCAGGAGGT +
Preference number: 4 (lower is better)
Translates to: KGRRDRDRKVTTHTHTHTGEGRG*PGMPGG
Trigger: ACCTCCTGGCATACCTGGCCAGCCTCTGCCTTCTCC...TGTGTGTGTGTGTGTGTGTGTTGTAACTTTCCTGTCTCTATCACGTCTTCCCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
CDS-3UTR CCA 90 bp AAGGGAAGACGTGATAGAGACAGGAAAGTTACAACACACACACACACACACACACGACCACCTCCTAGGTaGAGCCGAGTTGGAGAAGGC +
Preference number: 4 (lower is better)
Translates to: KGRRDRDRKVTTHTHTHTRPPPR*SRVGEG
Trigger: GCCTTCTCCAACTCGGCTCCACCTAGGAGGTGGTCG...TGTGTGTGTGTGTGTGTGTGTTGTAACTTTCCTGTCTCTATCACGTCTTCCCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
CDS-3UTR TCA 90 bp CCTTGCAAAGTTTTGGCTGCTGGGGTCCCACATGTCTCAAATTCACAGAGGAGGGAGGAATTGTATGGCTaGAGGAAGCGGATGAAGTTG +
Preference number: 4 (lower is better)
Translates to: PCKVLAAGVPHVSNSQRREELYG*RKRMKL
Trigger: CAACTTCATCCGCTTCCTTCAGCCATACAATTCCTC...CCTCCTCTGTGAATTTGAGACATGTGGGACCCCAGCAGCCAAAACTTTGCAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
CDS-3UTR CCA 90 bp CCTTGCAAAGTTTTGGCTGCTGGGGTCCCACATGTCTCAAATTCACAGAGGAGGTTGAAGCATTCGGTCTaGTTGCTCTTCCCTTTCTGG +
Preference number: 4 (lower is better)
Translates to: PCKVLAAGVPHVSNSQRRLKHSV*LLFPFW
Trigger: CCAGAAAGGGAAGAGCAACCAGACCGAATGCTTCAA...CCTCCTCTGTGAATTTGAGACATGTGGGACCCCAGCAGCCAAAACTTTGCAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
CDS-3UTR CCA 90 bp TCCCACATGTCTCAAATTCACAGAGGAGGGTGTGTCTCCTGTGAGGCTGAAGTCTTGAAGCATTCGGTCTaGTTGCTCTTCCCTTTCTGG +
Preference number: 4 (lower is better)
Translates to: SHMSQIHRGGCVSCEAEVLKHSV*LLFPFW
Trigger: CCAGAAAGGGAAGAGCAACCAGACCGAATGCTTCAA...GACTTCAGCCTCACAGGAGACACACCCTCCTCTGTGAATTTGAGACATGTGGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
CDS-3UTR CCA 90 bp CCTTGCAAAGTTTTGGCTGCTGGGGTCCCACATGTCTCAAATTCACAGAGGAGGCTTAGCTGGGTCATATaGGCATTTACCCTTCCCATC +
Preference number: 4 (lower is better)
Translates to: PCKVLAAGVPHVSNSQRRLSWVI*AFTLPI
Trigger: GATGGGAAGGGTAAATGCCCATATGACCCAGCTAAG...CCTCCTCTGTGAATTTGAGACATGTGGGACCCCAGCAGCCAAAACTTTGCAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
CDS-3UTR CCA 90 bp AACCCTTCCCAGCCCTGTCAGAAGAGCGCAAATATAAAATACCACCGAACCCGGCTTAGCTGGGTCATATaGGCATTTACCCTTCCCATC +
Preference number: 4 (lower is better)
Translates to: NPSQPCQKSANIKYHRTRLSWVI*AFTLPI
Trigger: GATGGGAAGGGTAAATGCCCATATGACCCAGCTAAG...CCGGGTTCGGTGGTATTTTATATTTGCGCTCTTCTGACAGGGCTGGGAAGGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
CDS-3UTR CCA 90 bp TCAGAAGAGCGCAAATATAAAATACCACCGAACCCGGAGGGCAAGTGGGAGGCCGCAGAGCCTACAAAGTaGGGTTCATTCAGCCAAAAA +
Preference number: 4 (lower is better)
Translates to: SEERKYKIPPNPEGKWEAAEPTK*GSFSQK
Trigger: TTTTTGGCTGAATGAACCCCACTTTGTAGGCTCTGC...GGCCTCCCACTTGCCCTCCGGGTTCGGTGGTATTTTATATTTGCGCTCTTCTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
CDS-3UTR CCA 90 bp CCCTTCCCAGCCCTGTCAGAAGAGCGCAAATATAAAATACCACCGAACCCGGAGTGGATCTGTTCCAACTaGTACTCACAAACTGCAGAC +
Preference number: 4 (lower is better)
Translates to: PFPALSEERKYKIPPNPEWICSN*YSQTAD
Trigger: GTCTGCAGTTTGTGAGTACCAGTTGGAACAGATCCA...CTCCGGGTTCGGTGGTATTTTATATTTGCGCTCTTCTGACAGGGCTGGGAAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
CDS-3UTR CCA 90 bp GGTCCCACATGTCTCAAATTCACAGAGGAGGGTGTGTCTCCTGTGAGGCTGAAGTGGATCTGTTCCAACTaGTACTCACAAACTGCAGAC +
Preference number: 4 (lower is better)
Translates to: GPTCLKFTEEGVSPVRLKWICSN*YSQTAD
Trigger: GTCTGCAGTTTGTGAGTACCAGTTGGAACAGATCCA...CTTCAGCCTCACAGGAGACACACCCTCCTCTGTGAATTTGAGACATGTGGGACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
CDS-3UTR CCA 90 bp TCAGAAGAGCGCAAATATAAAATACCACCGAACCCGGAGGGCAAGTGGGAGGCCTGGATCTGTTCCAACTaGTACTCACAAACTGCAGAC +
Preference number: 4 (lower is better)
Translates to: SEERKYKIPPNPEGKWEAWICSN*YSQTAD
Trigger: GTCTGCAGTTTGTGAGTACCAGTTGGAACAGATCCA...GGCCTCCCACTTGCCCTCCGGGTTCGGTGGTATTTTATATTTGCGCTCTTCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
CDS-3UTR CCA 90 bp CCTTGCAAAGTTTTGGCTGCTGGGGTCCCACATGTCTCAAATTCACAGAGGAGGCCCTCAAACACTTGCTaGATCTGTTCCAACTGGTAC +
Preference number: 4 (lower is better)
Translates to: PCKVLAAGVPHVSNSQRRPSNTC*ICSNWY
Trigger: GTACCAGTTGGAACAGATCCAGCAAGTGTTTGAGGG...CCTCCTCTGTGAATTTGAGACATGTGGGACCCCAGCAGCCAAAACTTTGCAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
CDS-3UTR CCA 90 bp AAGGGAAGACGTGATAGAGACAGGAAAGTTACAACACACACACACACACACACAGGGCATGGGCCAAATTaGACGAGAGGTGGCAGGGTA +
Preference number: 4 (lower is better)
Translates to: KGRRDRDRKVTTHTHTHTGHGPN*TRGGRV
Trigger: TACCCTGCCACCTCTCGTCCAATTTGGCCCATGCCC...TGTGTGTGTGTGTGTGTGTGTTGTAACTTTCCTGTCTCTATCACGTCTTCCCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
CDS-3UTR CCA 90 bp TCCCACATGTCTCAAATTCACAGAGGAGGGTGTGTCTCCTGTGAGGCTGAAGTCTCCTCTCAGATGCCTTaGCACCCTTTTCTAGCTCTT +
Preference number: 4 (lower is better)
Translates to: SHMSQIHRGGCVSCEAEVSSQMP*HPFLAL
Trigger: AAGAGCTAGAAAAGGGTGCCAAGGCATCTGAGAGGA...GACTTCAGCCTCACAGGAGACACACCCTCCTCTGTGAATTTGAGACATGTGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
3UTR CAA 72 bp TATGCACAAACACGCCCACATCTTGAAACCTCTTCCTaGCAAAGTTTTGGCTGCTGGGGTCCCACATGTCTC +
Preference number: 4 (lower is better)
Translates to: YAQTRPHLETSS*QSFGCWGPTCL
Trigger: GAGACATGTGGGACCCCAGCAGCCAAAACTTTGCAAGGAAGAGGTTTCAAGATGTGGGCGTGTTTGTGCATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
CDS-3UTR TCA 90 bp AGAGACAGGAAAGTTACAACACACACACACACACACACACATTCTTCCACATGCTGTCATCGTCTCCCGTaGAGCTTCCCACACTCTCAG +
Preference number: 4 (lower is better)
Translates to: RDRKVTTHTHTHTHSSTCCHRLP*SFPHSQ
Trigger: CTGAGAGTGTGGGAAGCTTCACGGGAGACGATGACA...GCATGTGGAAGAATGTGTGTGTGTGTGTGTGTGTGTTGTAACTTTCCTGTCTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
CDS-3UTR TCA 90 bp AAGGGAAGACGTGATAGAGACAGGAAAGTTACAACACACACACACACACACACACCGCCTTCAGCTGGTTaGAGTAGACCTTCCAGTCAG +
Preference number: 4 (lower is better)
Translates to: KGRRDRDRKVTTHTHTHTPPSAG*SRPSSQ
Trigger: CTGACTGGAAGGTCTACTTCAACCAGCTGAAGGCGG...TGTGTGTGTGTGTGTGTGTGTTGTAACTTTCCTGTCTCTATCACGTCTTCCCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
CDS-3UTR TCA 90 bp TCCCACATGTCTCAAATTCACAGAGGAGGGTGTGTCTCCTGTGAGGCTGAAGTCCATCTCCTGTACCAATaGACAACACTGTATAGGTGG +
Preference number: 4 (lower is better)
Translates to: SHMSQIHRGGCVSCEAEVHLLYQ*TTLYRW
Trigger: CCACCTATACAGTGTTGTTCATTGGTACAGGAGATG...GACTTCAGCCTCACAGGAGACACACCCTCCTCTGTGAATTTGAGACATGTGGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
CDS-3UTR TCA 90 bp AAGGGAAGACGTGATAGAGACAGGAAAGTTACAACACACACACACACACACACACACAGCGGCTGGTGTTaGCATTCCAGGCACAGTAAG +
Preference number: 4 (lower is better)
Translates to: KGRRDRDRKVTTHTHTHTHSGWC*HSRHSK
Trigger: CTTACTGTGCCTGGAATGTCAACACCAGCCGCTGTG...TGTGTGTGTGTGTGTGTGTGTTGTAACTTTCCTGTCTCTATCACGTCTTCCCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
CDS-3UTR CCA 90 bp AAGGGAAGACGTGATAGAGACAGGAAAGTTACAACACACACACACACACACACATCCTGGATGCCTGTCTaGGAGAACCGCCTCACTACT +
Preference number: 4 (lower is better)
Translates to: KGRRDRDRKVTTHTHTHTSWMPV*ENRLTT
Trigger: AGTAGTGAGGCGGTTCTCCCAGACAGGCATCCAGGA...TGTGTGTGTGTGTGTGTGTGTTGTAACTTTCCTGTCTCTATCACGTCTTCCCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
CDS-3UTR TCA 90 bp AAGGGAAGACGTGATAGAGACAGGAAAGTTACAACACACACACACACACACACAGTTATTGAGTGTGGCTaGGTACAGCTCACCGTCCAC +
Preference number: 4 (lower is better)
Translates to: KGRRDRDRKVTTHTHTHTVIECG*VQLTVH
Trigger: GTGGACGGTGAGCTGTACTCAGCCACACTCAATAAC...TGTGTGTGTGTGTGTGTGTGTTGTAACTTTCCTGTCTCTATCACGTCTTCCCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
CDS-3UTR GCA 90 bp AGAGACAGGAAAGTTACAACACACACACACACACACACACATTCTTCCACATGCGCAGTCATACTCCACTaGCCGCTCACTGAAGAAGAA +
Preference number: 4 (lower is better)
Translates to: RDRKVTTHTHTHTHSSTCAVILH*PLTEEE
Trigger: TTCTTCTTCAGTGAGCGGGCAGTGGAGTATGACTGC...GCATGTGGAAGAATGTGTGTGTGTGTGTGTGTGTGTTGTAACTTTCCTGTCTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
CDS-3UTR GCA 90 bp AAGGGAAGACGTGATAGAGACAGGAAAGTTACAACACACACACACACACACACAGGACCCTCAAACACTTaGTGGATCTGTTCCAACTGG +
Preference number: 4 (lower is better)
Translates to: KGRRDRDRKVTTHTHTHTGPSNT*WICSNW
Trigger: CCAGTTGGAACAGATCCAGCAAGTGTTTGAGGGTCC...TGTGTGTGTGTGTGTGTGTGTTGTAACTTTCCTGTCTCTATCACGTCTTCCCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
CDS-3UTR GCA 90 bp AGAGACAGGAAAGTTACAACACACACACACACACACACACATTCTTCCACATGCAACAAGGTAGCTTTCTaGAGCCAGTCTTGTCCCCTG +
Preference number: 4 (lower is better)
Translates to: RDRKVTTHTHTHTHSSTCNKVAF*SQSCPL
Trigger: CAGGGGACAAGACTGGCTGCAGAAAGCTACCTTGTT...GCATGTGGAAGAATGTGTGTGTGTGTGTGTGTGTGTTGTAACTTTCCTGTCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
CDS-3UTR CCA 90 bp AGAGACAGGAAAGTTACAACACACACACACACACACACACATTCTTCCACATGCGGTGTGACCCTTAGCTaGGTCATATGGGCATTTACC +
Preference number: 4 (lower is better)
Translates to: RDRKVTTHTHTHTHSSTCGVTLS*VIWAFT
Trigger: GGTAAATGCCCATATGACCCAGCTAAGGGTCACACC...GCATGTGGAAGAATGTGTGTGTGTGTGTGTGTGTGTTGTAACTTTCCTGTCTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
CDS-3UTR CCA 90 bp AAGGGAAGACGTGATAGAGACAGGAAAGTTACAACACACACACACACACACACAGGTGTGACCCTTAGCTaGGTCATATGGGCATTTACC +
Preference number: 4 (lower is better)
Translates to: KGRRDRDRKVTTHTHTHTGVTLS*VIWAFT
Trigger: GGTAAATGCCCATATGACCCAGCTAAGGGTCACACC...TGTGTGTGTGTGTGTGTGTGTTGTAACTTTCCTGTCTCTATCACGTCTTCCCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
CDS-3UTR CCA 90 bp AAGGGAAGACGTGATAGAGACAGGAAAGTTACAACACACACACACACACACACATCCTCTCAGATGCCTTaGCACCCTTTTCTAGCTCTT +
Preference number: 4 (lower is better)
Translates to: KGRRDRDRKVTTHTHTHTSSQMP*HPFLAL
Trigger: AAGAGCTAGAAAAGGGTGCCAAGGCATCTGAGAGGA...TGTGTGTGTGTGTGTGTGTGTTGTAACTTTCCTGTCTCTATCACGTCTTCCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
CDS-3UTR CAA 90 bp CAAGTGGCAGTGCCCATGCTGAGCAGGTCCTCACGGCCGGGCAAATGCTGGGCACCGAAGAAGGTGGTGTaGTGCCAAGAGGCGCCCCGC +
Preference number: 5 (lower is better)
Translates to: QVAVPMLSRSSRPGKCWAPKKVV*CQEAPR
Trigger: GCGGGGCGCCTCTTGGCACAACACCACCTTCTTCGG...TGCCCAGCATTTGCCCGGCCGTGAGGACCTGCTCAGCATGGGCACTGCCACTTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
CDS GCA 90 bp CACCACAGCGAGCCACACGAGCCCCAGGTTTTCCAAGGGAGCCCGTaGCTCCAGTGTCACCGACGAGCCGGCCACGACAGCAACAAGGTA +
Preference number: 5 (lower is better)
Translates to: HHSEPHEPQVFQGSP*LQCHRRAGHDSNKV
Trigger: TACCTTGTTGCTGTCGTGGCCGGCTCGTCGGTGACACTGGAGGCACGGGCTCCCTTGGAAAACCTGGGGCTCGTGTGGCTCGCTGTGGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
CDS-3UTR CAA 90 bp GGCCGGGCAAATGCTGGGCAGTGTCTGTCCCAGGCAGAGCAAGTGCCCCTGCCAGCCAGGTACTCTGTCTaGATGGAGTGGTGGGTCCCC +
Preference number: 5 (lower is better)
Translates to: GRANAGQCLSQAEQVPLPARYSV*MEWWVP
Trigger: GGGGACCCACCACTCCATCAAGACAGAGTACCTGGC...TGGCAGGGGCACTTGCTCTGCCTGGGACAGACACTGCCCAGCATTTGCCCGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
CDS-3UTR CAA 90 bp GCAGGTCCTCACGGCCGGGCAAATGCTGGGCAGTGTCTGTCCCAGGCAGAGCAACTAGGTGGAGCCGAGTaGGAGAAGGCAGAGGCTGGC +
Preference number: 5 (lower is better)
Translates to: AGPHGRANAGQCLSQAEQLGGAE*EKAEAG
Trigger: GCCAGCCTCTGCCTTCTCCAACTCGGCTCCACCTAG...TTGCTCTGCCTGGGACAGACACTGCCCAGCATTTGCCCGGCCGTGAGGACCTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
CDS-3UTR CAA 90 bp ATGCTGAGCAGGTCCTCACGGCCGGGCAAATGCTGGGCAGTGTCTGTCCCAGGCCTAGGTGGAGCCGAGTaGGAGAAGGCAGAGGCTGGC +
Preference number: 5 (lower is better)
Translates to: MLSRSSRPGKCWAVSVPGLGGAE*EKAEAG
Trigger: GCCAGCCTCTGCCTTCTCCAACTCGGCTCCACCTAG...GCCTGGGACAGACACTGCCCAGCATTTGCCCGGCCGTGAGGACCTGCTCAGCAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
CDS TCA 90 bp TGTGCCAAGAGGCGCCCCGCAGGGTGTGCACCGCCTTCAGCTGGTTaGAGTAGACCTTCCAGTCAGGGGCTGAGCACACCAACCGAGCCT +
Preference number: 5 (lower is better)
Translates to: CAKRRPAGCAPPSAG*SRPSSQGLSTPTEP
Trigger: AGGCTCGGTTGGTGTGCTCAGCCCCTGACTGGAAGGTCTACTTCAACCAGCTGAAGGCGGTGCACACCCTGCGGGGCGCCTCTTGGCACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
CDS-3UTR CAA 90 bp CAAGTGGCAGTGCCCATGCTGAGCAGGTCCTCACGGCCGGGCAAATGCTGGGCAGCCAGGTACTCTGTCTaGATGGAGTGGTGGGTCCCC +
Preference number: 5 (lower is better)
Translates to: QVAVPMLSRSSRPGKCWAARYSV*MEWWVP
Trigger: GGGGACCCACCACTCCATCAAGACAGAGTACCTGGC...TGCCCAGCATTTGCCCGGCCGTGAGGACCTGCTCAGCATGGGCACTGCCACTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
CDS-3UTR CAA 90 bp GGCCGGGCAAATGCTGGGCAGTGTCTGTCCCAGGCAGAGCAAGTGCCCCTGCCAGGCCCACTTCTGGGCTaGCTCACTGTACTCCTTGTA +
Preference number: 5 (lower is better)
Translates to: GRANAGQCLSQAEQVPLPGPLLG*LTVLLV
Trigger: TACAAGGAGTACAGTGAGCAAGCCCAGAAGTGGGCC...TGGCAGGGGCACTTGCTCTGCCTGGGACAGACACTGCCCAGCATTTGCCCGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
CDS-3UTR CAA 90 bp GGCCGGGCAAATGCTGGGCAGTGTCTGTCCCAGGCAGAGCAAGTGCCCCTGCCAAAGAAAGGAGCCAGGTaGTTCTGCAGGCAGGTCCTG +
Preference number: 5 (lower is better)
Translates to: GRANAGQCLSQAEQVPLPKKGAR*FCRQVL
Trigger: CAGGACCTGCCTGCAGAACAACCTGGCTCCTTTCTT...TGGCAGGGGCACTTGCTCTGCCTGGGACAGACACTGCCCAGCATTTGCCCGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
CDS-3UTR CAA 90 bp CAAATGCTGGGCAGTGTCTGTCCCAGGCAGAGCAAGTGCCCCTGCCATGTCCCTCTAGGTGGAGCCGAGTaGGAGAAGGCAGAGGCTGGC +
Preference number: 5 (lower is better)
Translates to: QMLGSVCPRQSKCPCHVPLGGAE*EKAEAG
Trigger: GCCAGCCTCTGCCTTCTCCAACTCGGCTCCACCTAG...AGGGACATGGCAGGGGCACTTGCTCTGCCTGGGACAGACACTGCCCAGCATTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
CDS GCA 90 bp AGGGGGCGGCCCAACCGAGGCTTCACCTGGTCCTCCATCAGGGGGTaGTTCTTGATGAAGTTGAGGGTGTTGTCCGGCAGTTCCAGGGAA +
Preference number: 5 (lower is better)
Translates to: RGRPNRGFTWSSIRG*FLMKLRVLSGSSRE
Trigger: TTCCCTGGAACTGCCGGACAACACCCTCAACTTCATCAAGAAGCACCCCCTGATGGAGGACCAGGTGAAGCCTCGGTTGGGCCGCCCCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
CDS CCA 90 bp CAGGCAGGTCCTGGCTTCCGAAGGTCCAGTGGGCATGGGCCAAATTaGACGAGAGGTGGCAGGGTAGGACCAGGTCTGTGCCTGACACAA +
Preference number: 5 (lower is better)
Translates to: QAGPGFRRSSGHGPN*TRGGRVGPGLCLTQ
Trigger: TTGTGTCAGGCACAGACCTGGTCCTACCCTGCCACCTCTCGTCCAATTTGGCCCATGCCCACTGGACCTTCGGAAGCCAGGACCTGCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
CDS-3UTR CAA 90 bp GGCCGGGCAAATGCTGGGCAGTGTCTGTCCCAGGCAGAGCAAGTGCCCCTGCCAGGGACCCTCAAACACTaGCTGGATCTGTTCCAACTG +
Preference number: 5 (lower is better)
Translates to: GRANAGQCLSQAEQVPLPGTLKH*LDLFQL
Trigger: CAGTTGGAACAGATCCAGCAAGTGTTTGAGGGTCCC...TGGCAGGGGCACTTGCTCTGCCTGGGACAGACACTGCCCAGCATTTGCCCGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
CDS GCA 90 bp CAGCGCCTGGAGTCCCGTGTCATAAAGAAAGGAGCCAGGTTGTTCTaGAGGCAGGTCCTGGCTTCCGAAGGTCCAGTGGGCATGGGCCAA +
Preference number: 5 (lower is better)
Translates to: QRLESRVIKKGARLF*RQVLASEGPVGMGQ
Trigger: TTGGCCCATGCCCACTGGACCTTCGGAAGCCAGGACCTGCCTGCAGAACAACCTGGCTCCTTTCTTTATGACACGGGACTCCAGGCGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
CDS-3UTR CAA 90 bp GGCCGGGCAAATGCTGGGCAGTGTCTGTCCCAGGCAGAGCAAGTGCCCCTGCCAAGGAAGCGGATGAAGTaGAAGCATTCGGTCTGGTTG +
Preference number: 5 (lower is better)
Translates to: GRANAGQCLSQAEQVPLPRKRMK*KHSVWL
Trigger: CAACCAGACCGAATGCTTCAACTTCATCCGCTTCCT...TGGCAGGGGCACTTGCTCTGCCTGGGACAGACACTGCCCAGCATTTGCCCGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
CDS-3UTR CAA 90 bp GCAGGTCCTCACGGCCGGGCAAATGCTGGGCAGTGTCTGTCCCAGGCAGAGCAAGTGCCCAGGAAGTTATaGAGTGTGGCTGAGTACAGC +
Preference number: 5 (lower is better)
Translates to: AGPHGRANAGQCLSQAEQVPRKL*SVAEYS
Trigger: GCTGTACTCAGCCACACTCAATAACTTCCTGGGCAC...TTGCTCTGCCTGGGACAGACACTGCCCAGCATTTGCCCGGCCGTGAGGACCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
CDS-3UTR CAA 90 bp CAAGTGGCAGTGCCCATGCTGAGCAGGTCCTCACGGCCGGGCAAATGCTGGGCAGTGCCCAGGAAGTTATaGAGTGTGGCTGAGTACAGC +
Preference number: 5 (lower is better)
Translates to: QVAVPMLSRSSRPGKCWAVPRKL*SVAEYS
Trigger: GCTGTACTCAGCCACACTCAATAACTTCCTGGGCAC...TGCCCAGCATTTGCCCGGCCGTGAGGACCTGCTCAGCATGGGCACTGCCACTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
CDS-3UTR CAA 90 bp TGGCTGCTGGGGTCCCACATGTCTCAAATTCACAGAGGAGGGTGTGTCTCCTGTCCGAAGAAGGTGGTGTaGTGCCAAGAGGCGCCCCGC +
Preference number: 5 (lower is better)
Translates to: WLLGSHMSQIHRGGCVSCPKKVV*CQEAPR
Trigger: GCGGGGCGCCTCTTGGCACAACACCACCTTCTTCGG...ACAGGAGACACACCCTCCTCTGTGAATTTGAGACATGTGGGACCCCAGCAGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
CDS-3UTR CAA 90 bp GCAGGTCCTCACGGCCGGGCAAATGCTGGGCAGTGTCTGTCCCAGGCAGAGCAAGGGACCCTCAAACACTaGCTGGATCTGTTCCAACTG +
Preference number: 5 (lower is better)
Translates to: AGPHGRANAGQCLSQAEQGTLKH*LDLFQL
Trigger: CAGTTGGAACAGATCCAGCAAGTGTTTGAGGGTCCC...TTGCTCTGCCTGGGACAGACACTGCCCAGCATTTGCCCGGCCGTGAGGACCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
CDS TCA 90 bp GAGCCTCCCAAGAGATCGCTCCTTGCAGCTCCAGAGCCTCTACACTaGAGGCAAACAGCGCCTCTCGGGCCCCCACATATAAAAGGCCAG +
Preference number: 5 (lower is better)
Translates to: EPPKRSLLAAPEPLH*RQTAPLGPPHIKGQ
Trigger: CTGGCCTTTTATATGTGGGGGCCCGAGAGGCGCTGTTTGCCTTCAGTGTAGAGGCTCTGGAGCTGCAAGGAGCGATCTCTTGGGAGGCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
CDS CCA 90 bp TGGCTTCCGAAGGTCCAGTGGGCATGGGCCAAATTGGACGAGAGGTaGCAGGGTAGGACCAGGTCTGTGCCTGACACAACGGTGATGTTC +
Preference number: 5 (lower is better)
Translates to: WLPKVQWAWAKLDER*QGRTRSVPDTTVMF
Trigger: GAACATCACCGTTGTGTCAGGCACAGACCTGGTCCTACCCTGCCACCTCTCGTCCAATTTGGCCCATGCCCACTGGACCTTCGGAAGCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
CDS-3UTR CAA 90 bp GCAGGTCCTCACGGCCGGGCAAATGCTGGGCAGTGTCTGTCCCAGGCAGAGCAAAAGCATTCGGTCTGGTaGCTCTTCCCTTTCTGGGTA +
Preference number: 5 (lower is better)
Translates to: AGPHGRANAGQCLSQAEQKHSVW*LFPFWV
Trigger: TACCCAGAAAGGGAAGAGCAACCAGACCGAATGCTT...TTGCTCTGCCTGGGACAGACACTGCCCAGCATTTGCCCGGCCGTGAGGACCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
CDS-3UTR CAA 90 bp TCAGAAGAGCGCAAATATAAAATACCACCGAACCCGGAGGGCAAGTGGGAGGCCCCGAAGAAGGTGGTGTaGTGCCAAGAGGCGCCCCGC +
Preference number: 5 (lower is better)
Translates to: SEERKYKIPPNPEGKWEAPKKVV*CQEAPR
Trigger: GCGGGGCGCCTCTTGGCACAACACCACCTTCTTCGG...GGCCTCCCACTTGCCCTCCGGGTTCGGTGGTATTTTATATTTGCGCTCTTCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
CDS-3UTR CAA 90 bp GCAGGTCCTCACGGCCGGGCAAATGCTGGGCAGTGTCTGTCCCAGGCAGAGCAATGCTTCTTGATGAAGTaGAGGGTGTTGTCCGGCAGT +
Preference number: 5 (lower is better)
Translates to: AGPHGRANAGQCLSQAEQCFLMK*RVLSGS
Trigger: ACTGCCGGACAACACCCTCAACTTCATCAAGAAGCA...TTGCTCTGCCTGGGACAGACACTGCCCAGCATTTGCCCGGCCGTGAGGACCTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
CDS-3UTR CAA 90 bp CAAGTGGCAGTGCCCATGCTGAGCAGGTCCTCACGGCCGGGCAAATGCTGGGCAATCAGGGGGTGCTTCTaGATGAAGTTGAGGGTGTTG +
Preference number: 5 (lower is better)
Translates to: QVAVPMLSRSSRPGKCWAIRGCF*MKLRVL
Trigger: CAACACCCTCAACTTCATCAAGAAGCACCCCCTGAT...TGCCCAGCATTTGCCCGGCCGTGAGGACCTGCTCAGCATGGGCACTGCCACTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
CDS-3UTR CAA 90 bp TGTCCTTCCCTTCCCCGTATGTACATCACTGCCCCAAAGCTTGGGACAGCTGGGTGGGCATGGGCCAAATaGGACGAGAGGTGGCAGGGT +
Preference number: 5 (lower is better)
Translates to: CPSLPRMYITAPKLGTAGWAWAK*DERWQG
Trigger: ACCCTGCCACCTCTCGTCCAATTTGGCCCATGCCCA...CCCAGCTGTCCCAAGCTTTGGGGCAGTGATGTACATACGGGGAAGGGAAGGACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
CDS CCA 90 bp CCTTGGGCAGTTCCAAGGGGTACACCAGTGTCCTCTCAGATGCCTTaGCACCCTTTTCTAGCTCTTCTCGAAGTCGCCGGCGGAGCGATA +
Preference number: 5 (lower is better)
Translates to: PWAVPRGTPVSSQMP*HPFLALLEVAGGAI
Trigger: TATCGCTCCGCCGGCGACTTCGAGAAGAGCTAGAAAAGGGTGCCAAGGCATCTGAGAGGACACTGGTGTACCCCTTGGAACTGCCCAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
CDS-3UTR CAA 90 bp GGCAGTGTCTGTCCCAGGCAGAGCAAGTGCCCCTGCCATGTCCCTGAGGTAGCTAAGCATTCGGTCTGGTaGCTCTTCCCTTTCTGGGTA +
Preference number: 5 (lower is better)
Translates to: GSVCPRQSKCPCHVPEVAKHSVW*LFPFWV
Trigger: TACCCAGAAAGGGAAGAGCAACCAGACCGAATGCTT...AGCTACCTCAGGGACATGGCAGGGGCACTTGCTCTGCCTGGGACAGACACTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
CDS-3UTR CAA 90 bp CAAGTGGCAGTGCCCATGCTGAGCAGGTCCTCACGGCCGGGCAAATGCTGGGCACATAACCATTGGCATTaGAGTTCCGACCACCTCCTA +
Preference number: 5 (lower is better)
Translates to: QVAVPMLSRSSRPGKCWAHNHWH*SSDHLL
Trigger: TAGGAGGTGGTCGGAACTCAAATGCCAATGGTTATG...TGCCCAGCATTTGCCCGGCCGTGAGGACCTGCTCAGCATGGGCACTGCCACTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
CDS-3UTR CAA 90 bp ATGCTGAGCAGGTCCTCACGGCCGGGCAAATGCTGGGCAGTGTCTGTCCCAGGCCATAACCATTGGCATTaGAGTTCCGACCACCTCCTA +
Preference number: 5 (lower is better)
Translates to: MLSRSSRPGKCWAVSVPGHNHWH*SSDHLL
Trigger: TAGGAGGTGGTCGGAACTCAAATGCCAATGGTTATG...GCCTGGGACAGACACTGCCCAGCATTTGCCCGGCCGTGAGGACCTGCTCAGCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
CDS GCA 90 bp TGTTGTAGTTTCCGTCGTAATTCATCCGCGAGCTCAGGCAGTGGGTaGCCAGATCCTCCTCGGTCCTCTCCGCCCAACTGTAAACGCACA +
Preference number: 5 (lower is better)
Translates to: CCSFRRNSSASSGSG*PDPPRSSPPNCKRT
Trigger: TGTGCGTTTACAGTTGGGCGGAGAGGACCGAGGAGGATCTGGGCACCCACTGCCTGAGCTCGCGGATGAATTACGACGGAAACTACAACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
CDS-3UTR CAA 90 bp CCCTTCCCAGCCCTGTCAGAAGAGCGCAAATATAAAATACCACCGAACCCGGAGGCCAGGTACTCTGTCTaGATGGAGTGGTGGGTCCCC +
Preference number: 5 (lower is better)
Translates to: PFPALSEERKYKIPPNPEARYSV*MEWWVP
Trigger: GGGGACCCACCACTCCATCAAGACAGAGTACCTGGC...CTCCGGGTTCGGTGGTATTTTATATTTGCGCTCTTCTGACAGGGCTGGGAAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
CDS-3UTR CAA 90 bp TGTCCTTCCCTTCCCCGTATGTACATCACTGCCCCAAAGCTTGGGACAGCTGGGGGCCCACTTCTGGGCTaGCTCACTGTACTCCTTGTA +
Preference number: 5 (lower is better)
Translates to: CPSLPRMYITAPKLGTAGGPLLG*LTVLLV
Trigger: TACAAGGAGTACAGTGAGCAAGCCCAGAAGTGGGCC...CCCAGCTGTCCCAAGCTTTGGGGCAGTGATGTACATACGGGGAAGGGAAGGACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
CDS-3UTR CAA 90 bp GGTCCCACATGTCTCAAATTCACAGAGGAGGGTGTGTCTCCTGTGAGGCTGAAGTGGGCATGGGCCAAATaGGACGAGAGGTGGCAGGGT +
Preference number: 5 (lower is better)
Translates to: GPTCLKFTEEGVSPVRLKWAWAK*DERWQG
Trigger: ACCCTGCCACCTCTCGTCCAATTTGGCCCATGCCCA...CTTCAGCCTCACAGGAGACACACCCTCCTCTGTGAATTTGAGACATGTGGGACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
CDS TCA 90 bp TCGAAGGATAACCGGCTCTGTGCCCAGGAAGTTATTGAGTGTGGCTaGGTACAGCTCACCGTCCACAAGGAGTCCGGTGTGACCCTTAGC +
Preference number: 5 (lower is better)
Translates to: SKDNRLCAQEVIECG*VQLTVHKESGVTLS
Trigger: GCTAAGGGTCACACCGGACTCCTTGTGGACGGTGAGCTGTACTCAGCCACACTCAATAACTTCCTGGGCACAGAGCCGGTTATCCTTCGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
CDS CCA 90 bp ATCCTCCTCGGTCCTCTCCGCCCAACTGTAAACGCACATAACCATTaGCATTTGAGTTCCGACCACCTCCTAGGTGGAGCCGAGTTGGAG +
Preference number: 5 (lower is better)
Translates to: ILLGPLRPTVNAHNH*HLSSDHLLGGAELE
Trigger: CTCCAACTCGGCTCCACCTAGGAGGTGGTCGGAACTCAAATGCCAATGGTTATGTGCGTTTACAGTTGGGCGGAGAGGACCGAGGAGGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
CDS-3UTR CAA 90 bp TGTCCTTCCCTTCCCCGTATGTACATCACTGCCCCAAAGCTTGGGACAGCTGGGGGGACCCTCAAACACTaGCTGGATCTGTTCCAACTG +
Preference number: 5 (lower is better)
Translates to: CPSLPRMYITAPKLGTAGGTLKH*LDLFQL
Trigger: CAGTTGGAACAGATCCAGCAAGTGTTTGAGGGTCCC...CCCAGCTGTCCCAAGCTTTGGGGCAGTGATGTACATACGGGGAAGGGAAGGACA
56% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
CDS GCA 90 bp CATTCAATTTTCTTCTCAGCTGGAGCCTCCCAAGAGATCGCTCCTTaGAGCTCCAGAGCCTCTACACTGAAGGCAAACAGCGCCTCTCGG +
Preference number: 5 (lower is better)
Translates to: HSIFFSAGASQEIAP*SSRASTLKANSASR
Trigger: CCGAGAGGCGCTGTTTGCCTTCAGTGTAGAGGCTCTGGAGCTGCAAGGAGCGATCTCTTGGGAGGCTCCAGCTGAGAAGAAAATTGAATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
CDS CCA 90 bp CTCACCGTCCACAAGGAGTCCGGTGTGACCCTTAGCTGGGTCATATaGGCATTTACCCTTCCCATCCTCAAATTCTGCACGGTCCAAGGT +
Preference number: 5 (lower is better)
Translates to: LTVHKESGVTLSWVI*AFTLPILKFCTVQG
Trigger: ACCTTGGACCGTGCAGAATTTGAGGATGGGAAGGGTAAATGCCCATATGACCCAGCTAAGGGTCACACCGGACTCCTTGTGGACGGTGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
CDS-3UTR CAA 90 bp TCAGAAGAGCGCAAATATAAAATACCACCGAACCCGGAGGGCAAGTGGGAGGCCGGCCCACTTCTGGGCTaGCTCACTGTACTCCTTGTA +
Preference number: 5 (lower is better)
Translates to: SEERKYKIPPNPEGKWEAGPLLG*LTVLLV
Trigger: TACAAGGAGTACAGTGAGCAAGCCCAGAAGTGGGCC...GGCCTCCCACTTGCCCTCCGGGTTCGGTGGTATTTTATATTTGCGCTCTTCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
CDS-3UTR CAA 90 bp CAAGTGGCAGTGCCCATGCTGAGCAGGTCCTCACGGCCGGGCAAATGCTGGGCAACAACGGTGATGTTCTaGGGAATAGATCTGACTTTT +
Preference number: 5 (lower is better)
Translates to: QVAVPMLSRSSRPGKCWATTVMF*GIDLTF
Trigger: AAAAGTCAGATCTATTCCCAAGAACATCACCGTTGT...TGCCCAGCATTTGCCCGGCCGTGAGGACCTGCTCAGCATGGGCACTGCCACTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
CDS CCA 90 bp TATAAAAGGCCAGAATGTTCTGTCAGGGTCAGTGTCAGGAAGTCCTaGATGCCTGTCTGGGAGAACCGCCTCACTACTGTGACCAGCTCC +
Preference number: 5 (lower is better)
Translates to: YKRPECSVRVSVRKS*MPVWENRLTTVTSS
Trigger: GGAGCTGGTCACAGTAGTGAGGCGGTTCTCCCAGACAGGCATCCAGGACTTCCTGACACTGACCCTGACAGAACATTCTGGCCTTTTATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
CDS CCA 90 bp GGTTCATTCAGCCAAAAAGCCAGGTACTCTGTCTTGATGGAGTGGTaGGTCCCCATGTATCGAAGGATAACCGGCTCTGTGCCCAGGAAG +
Preference number: 5 (lower is better)
Translates to: GSFSQKARYSVLMEW*VPMYRRITGSVPRK
Trigger: CTTCCTGGGCACAGAGCCGGTTATCCTTCGATACATGGGGACCCACCACTCCATCAAGACAGAGTACCTGGCTTTTTGGCTGAATGAACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
CDS CCA 90 bp AGCAAAGAGCACCTTCTTGCTCTGAGACAGCACCAGACTTTCCACTaGCTCCTGGTCAAACACCTGCAGTTCCTCCACCATGTGGATCCA +
Preference number: 5 (lower is better)
Translates to: SKEHLLALRQHQTFH*LLVKHLQFLHHVDP
Trigger: TGGATCCACATGGTGGAGGAACTGCAGGTGTTTGACCAGGAGCCAGTGGAAAGTCTGGTGCTGTCTCAGAGCAAGAAGGTGCTCTTTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
CDS-3UTR CAA 90 bp TGGCTGCTGGGGTCCCACATGTCTCAAATTCACAGAGGAGGGTGTGTCTCCTGTAAGCATTCGGTCTGGTaGCTCTTCCCTTTCTGGGTA +
Preference number: 5 (lower is better)
Translates to: WLLGSHMSQIHRGGCVSCKHSVW*LFPFWV
Trigger: TACCCAGAAAGGGAAGAGCAACCAGACCGAATGCTT...ACAGGAGACACACCCTCCTCTGTGAATTTGAGACATGTGGGACCCCAGCAGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
CDS-3UTR CAA 90 bp TCAGAAGAGCGCAAATATAAAATACCACCGAACCCGGAGGGCAAGTGGGAGGCCGTGCCCAGGAAGTTATaGAGTGTGGCTGAGTACAGC +
Preference number: 5 (lower is better)
Translates to: SEERKYKIPPNPEGKWEAVPRKL*SVAEYS
Trigger: GCTGTACTCAGCCACACTCAATAACTTCCTGGGCAC...GGCCTCCCACTTGCCCTCCGGGTTCGGTGGTATTTTATATTTGCGCTCTTCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
CDS-3UTR CAA 90 bp TCCCACATGTCTCAAATTCACAGAGGAGGGTGTGTCTCCTGTGAGGCTGAAGTCAAGAAAGGAGCCAGGTaGTTCTGCAGGCAGGTCCTG +
Preference number: 5 (lower is better)
Translates to: SHMSQIHRGGCVSCEAEVKKGAR*FCRQVL
Trigger: CAGGACCTGCCTGCAGAACAACCTGGCTCCTTTCTT...GACTTCAGCCTCACAGGAGACACACCCTCCTCTGTGAATTTGAGACATGTGGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
CDS-3UTR CAA 90 bp TCAGAAGAGCGCAAATATAAAATACCACCGAACCCGGAGGGCAAGTGGGAGGCCTGCTTCTTGATGAAGTaGAGGGTGTTGTCCGGCAGT +
Preference number: 5 (lower is better)
Translates to: SEERKYKIPPNPEGKWEACFLMK*RVLSGS
Trigger: ACTGCCGGACAACACCCTCAACTTCATCAAGAAGCA...GGCCTCCCACTTGCCCTCCGGGTTCGGTGGTATTTTATATTTGCGCTCTTCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
CDS-3UTR CAA 90 bp GTTTTGGCTGCTGGGGTCCCACATGTCTCAAATTCACAGAGGAGGGTGTGTCTCTGCTTCTTGATGAAGTaGAGGGTGTTGTCCGGCAGT +
Preference number: 5 (lower is better)
Translates to: VLAAGVPHVSNSQRRVCLCFLMK*RVLSGS
Trigger: ACTGCCGGACAACACCCTCAACTTCATCAAGAAGCA...GAGACACACCCTCCTCTGTGAATTTGAGACATGTGGGACCCCAGCAGCCAAAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
CDS-3UTR CAA 90 bp TGGCTGCTGGGGTCCCACATGTCTCAAATTCACAGAGGAGGGTGTGTCTCCTGTCATAACCATTGGCATTaGAGTTCCGACCACCTCCTA +
Preference number: 5 (lower is better)
Translates to: WLLGSHMSQIHRGGCVSCHNHWH*SSDHLL
Trigger: TAGGAGGTGGTCGGAACTCAAATGCCAATGGTTATG...ACAGGAGACACACCCTCCTCTGTGAATTTGAGACATGTGGGACCCCAGCAGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
CDS CCA 90 bp TCCTGTACCAATGAACAACACTGTATAGGTGGCACCATCAAGCCCTaGGACCCTGTCGGCCACCACGTGTGTGAAGTTAGTGTTCTTCTT +
Preference number: 5 (lower is better)
Translates to: SCTNEQHCIGGTIKP*DPVGHHVCEVSVLL
Trigger: AAGAAGAACACTAACTTCACACACGTGGTGGCCGACAGGGTCCCAGGGCTTGATGGTGCCACCTATACAGTGTTGTTCATTGGTACAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
CDS-3UTR CAA 90 bp AACCCTTCCCAGCCCTGTCAGAAGAGCGCAAATATAAAATACCACCGAACCCGGAAGCATTCGGTCTGGTaGCTCTTCCCTTTCTGGGTA +
Preference number: 5 (lower is better)
Translates to: NPSQPCQKSANIKYHRTRKHSVW*LFPFWV
Trigger: TACCCAGAAAGGGAAGAGCAACCAGACCGAATGCTT...CCGGGTTCGGTGGTATTTTATATTTGCGCTCTTCTGACAGGGCTGGGAAGGGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
CDS-3UTR CAA 90 bp AAGGGAAGACGTGATAGAGACAGGAAAGTTACAACACACACACACACACACACAGCCAGGTACTCTGTCTaGATGGAGTGGTGGGTCCCC +
Preference number: 5 (lower is better)
Translates to: KGRRDRDRKVTTHTHTHTARYSV*MEWWVP
Trigger: GGGGACCCACCACTCCATCAAGACAGAGTACCTGGC...TGTGTGTGTGTGTGTGTGTGTTGTAACTTTCCTGTCTCTATCACGTCTTCCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
CDS-3UTR CAA 90 bp TCCCACATGTCTCAAATTCACAGAGGAGGGTGTGTCTCCTGTGAGGCTGAAGTCTGCTTCTTGATGAAGTaGAGGGTGTTGTCCGGCAGT +
Preference number: 5 (lower is better)
Translates to: SHMSQIHRGGCVSCEAEVCFLMK*RVLSGS
Trigger: ACTGCCGGACAACACCCTCAACTTCATCAAGAAGCA...GACTTCAGCCTCACAGGAGACACACCCTCCTCTGTGAATTTGAGACATGTGGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
CDS-3UTR CAA 90 bp CCTTGCAAAGTTTTGGCTGCTGGGGTCCCACATGTCTCAAATTCACAGAGGAGGATCAGGGGGTGCTTCTaGATGAAGTTGAGGGTGTTG +
Preference number: 5 (lower is better)
Translates to: PCKVLAAGVPHVSNSQRRIRGCF*MKLRVL
Trigger: CAACACCCTCAACTTCATCAAGAAGCACCCCCTGAT...CCTCCTCTGTGAATTTGAGACATGTGGGACCCCAGCAGCCAAAACTTTGCAAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
CDS-3UTR CAA 90 bp CCCTTCCCAGCCCTGTCAGAAGAGCGCAAATATAAAATACCACCGAACCCGGAGCATAACCATTGGCATTaGAGTTCCGACCACCTCCTA +
Preference number: 5 (lower is better)
Translates to: PFPALSEERKYKIPPNPEHNHWH*SSDHLL
Trigger: TAGGAGGTGGTCGGAACTCAAATGCCAATGGTTATG...CTCCGGGTTCGGTGGTATTTTATATTTGCGCTCTTCTGACAGGGCTGGGAAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
CDS-3UTR CAA 90 bp TGTCCTTCCCTTCCCCGTATGTACATCACTGCCCCAAAGCTTGGGACAGCTGGGACAACGGTGATGTTCTaGGGAATAGATCTGACTTTT +
Preference number: 5 (lower is better)
Translates to: CPSLPRMYITAPKLGTAGTTVMF*GIDLTF
Trigger: AAAAGTCAGATCTATTCCCAAGAACATCACCGTTGT...CCCAGCTGTCCCAAGCTTTGGGGCAGTGATGTACATACGGGGAAGGGAAGGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
CDS GCA 90 bp CTTAGCTGGGTCATATGGGCATTTACCCTTCCCATCCTCAAATTCTaGACGGTCCAAGGTGAACGTGAGCATGTTGATGTAGGTGCACTT +
Preference number: 5 (lower is better)
Translates to: LSWVIWAFTLPILKF*TVQGEREHVDVGAL
Trigger: AAGTGCACCTACATCAACATGCTCACGTTCACCTTGGACCGTGCAGAATTTGAGGATGGGAAGGGTAAATGCCCATATGACCCAGCTAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
CDS-3UTR CAA 90 bp AGAGACAGGAAAGTTACAACACACACACACACACACACACATTCTTCCACATGCGGCCCACTTCTGGGCTaGCTCACTGTACTCCTTGTA +
Preference number: 5 (lower is better)
Translates to: RDRKVTTHTHTHTHSSTCGPLLG*LTVLLV
Trigger: TACAAGGAGTACAGTGAGCAAGCCCAGAAGTGGGCC...GCATGTGGAAGAATGTGTGTGTGTGTGTGTGTGTGTTGTAACTTTCCTGTCTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
CDS-3UTR CAA 90 bp AAGGGAAGACGTGATAGAGACAGGAAAGTTACAACACACACACACACACACACAGTGCCCAGGAAGTTATaGAGTGTGGCTGAGTACAGC +
Preference number: 5 (lower is better)
Translates to: KGRRDRDRKVTTHTHTHTVPRKL*SVAEYS
Trigger: GCTGTACTCAGCCACACTCAATAACTTCCTGGGCAC...TGTGTGTGTGTGTGTGTGTGTTGTAACTTTCCTGTCTCTATCACGTCTTCCCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
CDS-3UTR CAA 90 bp GGTCCCACATGTCTCAAATTCACAGAGGAGGGTGTGTCTCCTGTGAGGCTGAAGACAACGGTGATGTTCTaGGGAATAGATCTGACTTTT +
Preference number: 5 (lower is better)
Translates to: GPTCLKFTEEGVSPVRLKTTVMF*GIDLTF
Trigger: AAAAGTCAGATCTATTCCCAAGAACATCACCGTTGT...CTTCAGCCTCACAGGAGACACACCCTCCTCTGTGAATTTGAGACATGTGGGACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
CDS-3UTR CAA 90 bp AACCCTTCCCAGCCCTGTCAGAAGAGCGCAAATATAAAATACCACCGAACCCGGACAACGGTGATGTTCTaGGGAATAGATCTGACTTTT +
Preference number: 5 (lower is better)
Translates to: NPSQPCQKSANIKYHRTRTTVMF*GIDLTF
Trigger: AAAAGTCAGATCTATTCCCAAGAACATCACCGTTGT...CCGGGTTCGGTGGTATTTTATATTTGCGCTCTTCTGACAGGGCTGGGAAGGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
CDS GCA 72 bp GAGCCACACGAGCCCCAGGTTTTCCAAGGGAGCCCGTaGCTCCAGTGTCACCGACGAGCCGGCCACGACAGC +
Preference number: 6 (lower is better)
Translates to: EPHEPQVFQGSP*LQCHRRAGHDS
Trigger: GCTGTCGTGGCCGGCTCGTCGGTGACACTGGAGGCACGGGCTCCCTTGGAAAACCTGGGGCTCGTGTGGCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
CDS TCA 72 bp AGGCGCCCCGCAGGGTGTGCACCGCCTTCAGCTGGTTaGAGTAGACCTTCCAGTCAGGGGCTGAGCACACCA +
Preference number: 6 (lower is better)
Translates to: RRPAGCAPPSAG*SRPSSQGLSTP
Trigger: TGGTGTGCTCAGCCCCTGACTGGAAGGTCTACTTCAACCAGCTGAAGGCGGTGCACACCCTGCGGGGCGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
CDS CCA 72 bp GCAGGCAGGTCCTGGCTTCCGAAGGTCCAGTGGGCATaGGCCAAATTGGACGAGAGGTGGCAGGGTAGGACC +
Preference number: 6 (lower is better)
Translates to: AGRSWLPKVQWA*AKLDERWQGRT
Trigger: GGTCCTACCCTGCCACCTCTCGTCCAATTTGGCCCATGCCCACTGGACCTTCGGAAGCCAGGACCTGCCTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
CDS CAA 90 bp GCAGGCAGGTCCTGGCTTCCGAAGGTCCAGTGGGCATGGGCCAAATaGGACGAGAGGTGGCAGGGTAGGACCAGGTCTGTGCCTGACACA +
Preference number: 6 (lower is better)
Translates to: AGRSWLPKVQWAWAK*DERWQGRTRSVPDT
Trigger: TGTGTCAGGCACAGACCTGGTCCTACCCTGCCACCTCTCGTCCAATTTGGCCCATGCCCACTGGACCTTCGGAAGCCAGGACCTGCCTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
CDS CCA 72 bp CCTGGCTTCCGAAGGTCCAGTGGGCATGGGCCAAATTaGACGAGAGGTGGCAGGGTAGGACCAGGTCTGTGC +
Preference number: 6 (lower is better)
Translates to: PGFRRSSGHGPN*TRGGRVGPGLC
Trigger: GCACAGACCTGGTCCTACCCTGCCACCTCTCGTCCAATTTGGCCCATGCCCACTGGACCTTCGGAAGCCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
CDS CAA 72 bp TCCTGGCTTCCGAAGGTCCAGTGGGCATGGGCCAAATaGGACGAGAGGTGGCAGGGTAGGACCAGGTCTGTG +
Preference number: 6 (lower is better)
Translates to: SWLPKVQWAWAK*DERWQGRTRSV
Trigger: CACAGACCTGGTCCTACCCTGCCACCTCTCGTCCAATTTGGCCCATGCCCACTGGACCTTCGGAAGCCAGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
CDS CAA 90 bp CGGCCCAACCGAGGCTTCACCTGGTCCTCCATCAGGGGGTGCTTCTaGATGAAGTTGAGGGTGTTGTCCGGCAGTTCCAGGGAACTGGTG +
Preference number: 6 (lower is better)
Translates to: RPNRGFTWSSIRGCF*MKLRVLSGSSRELV
Trigger: CACCAGTTCCCTGGAACTGCCGGACAACACCCTCAACTTCATCAAGAAGCACCCCCTGATGGAGGACCAGGTGAAGCCTCGGTTGGGCCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
CDS TCA 72 bp CCTGGATGCCTGTCTGGGAGAACCGCCTCACTACTGTaGCCAGCTCCCCAGAAGATACTGTCTTCCGGGGCA +
Preference number: 6 (lower is better)
Translates to: PGCLSGRTASLL*PAPQKILSSGA
Trigger: TGCCCCGGAAGACAGTATCTTCTGGGGAGCTGGTCACAGTAGTGAGGCGGTTCTCCCAGACAGGCATCCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
CDS GCA 72 bp AGCACCAGACTTTCCACTGGCTCCTGGTCAAACACCTaGAGTTCCTCCACCATGTGGATCCAGGGCCCCAGG +
Preference number: 6 (lower is better)
Translates to: STRLSTGSWSNT*SSSTMWIQGPR
Trigger: CCTGGGGCCCTGGATCCACATGGTGGAGGAACTGCAGGTGTTTGACCAGGAGCCAGTGGAAAGTCTGGTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
CDS CAA 90 bp TCCTTGGGCAGTTCCAAGGGGTACACCAGTGTCCTCTCAGATGCCTaGGCACCCTTTTCTAGCTCTTCTCGAAGTCGCCGGCGGAGCGAT +
Preference number: 6 (lower is better)
Translates to: SLGSSKGYTSVLSDA*APFSSSSRSRRRSD
Trigger: ATCGCTCCGCCGGCGACTTCGAGAAGAGCTAGAAAAGGGTGCCAAGGCATCTGAGAGGACACTGGTGTACCCCTTGGAACTGCCCAAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
CDS GCA 72 bp CCAGCTGAGAGCGGGAGCCAGCAAAGAGCACCTTCTTaGTCTGAGACAGCACCAGACTTTCCACTGGCTCCT +
Preference number: 6 (lower is better)
Translates to: PAESGSQQRAPS*SETAPDFPLAP
Trigger: AGGAGCCAGTGGAAAGTCTGGTGCTGTCTCAGAGCAAGAAGGTGCTCTTTGCTGGCTCCCGCTCTCAGCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
CDS GCA 72 bp GAGTCCCGTGTCATAAAGAAAGGAGCCAGGTTGTTCTaGAGGCAGGTCCTGGCTTCCGAAGGTCCAGTGGGC +
Preference number: 6 (lower is better)
Translates to: ESRVIKKGARLF*RQVLASEGPVG
Trigger: GCCCACTGGACCTTCGGAAGCCAGGACCTGCCTGCAGAACAACCTGGCTCCTTTCTTTATGACACGGGACTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
CDS CAA 72 bp GGGTACCGGGTCAGTATAGCGGGCCCACTTCTGGGCTaGCTCACTGTACTCCTTGTAGGGACCCTCAAACAC +
Preference number: 6 (lower is better)
Translates to: GYRVSIAGPLLG*LTVLLVGTLKH
Trigger: GTGTTTGAGGGTCCCTACAAGGAGTACAGTGAGCAAGCCCAGAAGTGGGCCCGCTATACTGACCCGGTACCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
CDS CAA 72 bp CGAGGCTTCACCTGGTCCTCCATCAGGGGGTGCTTCTaGATGAAGTTGAGGGTGTTGTCCGGCAGTTCCAGG +
Preference number: 6 (lower is better)
Translates to: RGFTWSSIRGCF*MKLRVLSGSSR
Trigger: CCTGGAACTGCCGGACAACACCCTCAACTTCATCAAGAAGCACCCCCTGATGGAGGACCAGGTGAAGCCTCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
CDS TCA 72 bp AACCGGCTCTGTGCCCAGGAAGTTATTGAGTGTGGCTaGGTACAGCTCACCGTCCACAAGGAGTCCGGTGTG +
Preference number: 6 (lower is better)
Translates to: NRLCAQEVIECG*VQLTVHKESGV
Trigger: CACACCGGACTCCTTGTGGACGGTGAGCTGTACTCAGCCACACTCAATAACTTCCTGGGCACAGAGCCGGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
CDS CCA 72 bp GTTCCAAGGGGTACACCAGTGTCCTCTCAGATGCCTTaGCACCCTTTTCTAGCTCTTCTCGAAGTCGCCGGC +
Preference number: 6 (lower is better)
Translates to: VPRGTPVSSQMP*HPFLALLEVAG
Trigger: GCCGGCGACTTCGAGAAGAGCTAGAAAAGGGTGCCAAGGCATCTGAGAGGACACTGGTGTACCCCTTGGAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
CDS CCA 72 bp ACTGAAGACTCCTCTGGGTTGGAGTCAGGCAGCGGCTaGCGCTGTTGTAGTTTCCGTCGTAATTCATCCGCG +
Preference number: 6 (lower is better)
Translates to: TEDSSGLESGSG*RCCSFRRNSSA
Trigger: CGCGGATGAATTACGACGGAAACTACAACAGCGCCAGCCGCTGCCTGACTCCAACCCAGAGGAGTCTTCAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
CDS CAA 72 bp CCCTGGCCAGGACACAGTCTACACAGAAACGGTACTTaGTGCAGTCGGCCAGAGACAGCTGAACCAGCTGAG +
Preference number: 6 (lower is better)
Translates to: PWPGHSLHRNGT*CSRPETAEPAE
Trigger: CTCAGCTGGTTCAGCTGTCTCTGGCCGACTGCACAAAGTACCGTTTCTGTGTAGACTGTGTCCTGGCCAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
CDS CAA 90 bp GTCCCCATGTATCGAAGGATAACCGGCTCTGTGCCCAGGAAGTTATaGAGTGTGGCTGAGTACAGCTCACCGTCCACAAGGAGTCCGGTG +
Preference number: 6 (lower is better)
Translates to: VPMYRRITGSVPRKL*SVAEYSSPSTRSPV
Trigger: CACCGGACTCCTTGTGGACGGTGAGCTGTACTCAGCCACACTCAATAACTTCCTGGGCACAGAGCCGGTTATCCTTCGATACATGGGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
CDS CAA 90 bp CTCGGTCCTCTCCGCCCAACTGTAAACGCACATAACCATTGGCATTaGAGTTCCGACCACCTCCTAGGTGGAGCCGAGTTGGAGAAGGCA +
Preference number: 6 (lower is better)
Translates to: LGPLRPTVNAHNHWH*SSDHLLGGAELEKA
Trigger: TGCCTTCTCCAACTCGGCTCCACCTAGGAGGTGGTCGGAACTCAAATGCCAATGGTTATGTGCGTTTACAGTTGGGCGGAGAGGACCGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
CDS TCA 72 bp GCTGAGTACAGCTCACCGTCCACAAGGAGTCCGGTGTaGCCCTTAGCTGGGTCATATGGGCATTTACCCTTC +
Preference number: 6 (lower is better)
Translates to: AEYSSPSTRSPV*PLAGSYGHLPF
Trigger: GAAGGGTAAATGCCCATATGACCCAGCTAAGGGTCACACCGGACTCCTTGTGGACGGTGAGCTGTACTCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
CDS GCA 72 bp TTCTTCTCAGCTGGAGCCTCCCAAGAGATCGCTCCTTaGAGCTCCAGAGCCTCTACACTGAAGGCAAACAGC +
Preference number: 6 (lower is better)
Translates to: FFSAGASQEIAP*SSRASTLKANS
Trigger: GCTGTTTGCCTTCAGTGTAGAGGCTCTGGAGCTGCAAGGAGCGATCTCTTGGGAGGCTCCAGCTGAGAAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
CDS GCA 72 bp TGGCCAGGACACAGTCTACACAGAAACGGTACTTTGTaGAGTCGGCCAGAGACAGCTGAACCAGCTGAGAGC +
Preference number: 6 (lower is better)
Translates to: WPGHSLHRNGTL*SRPETAEPAES
Trigger: GCTCTCAGCTGGTTCAGCTGTCTCTGGCCGACTGCACAAAGTACCGTTTCTGTGTAGACTGTGTCCTGGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
CDS CCA 72 bp CCAGAATGTTCTGTCAGGGTCAGTGTCAGGAAGTCCTaGATGCCTGTCTGGGAGAACCGCCTCACTACTGTG +
Preference number: 6 (lower is better)
Translates to: PECSVRVSVRKS*MPVWENRLTTV
Trigger: CACAGTAGTGAGGCGGTTCTCCCAGACAGGCATCCAGGACTTCCTGACACTGACCCTGACAGAACATTCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
CDS CCA 72 bp GGTCCTCTCCGCCCAACTGTAAACGCACATAACCATTaGCATTTGAGTTCCGACCACCTCCTAGGTGGAGCC +
Preference number: 6 (lower is better)
Translates to: GPLRPTVNAHNH*HLSSDHLLGGA
Trigger: GGCTCCACCTAGGAGGTGGTCGGAACTCAAATGCCAATGGTTATGTGCGTTTACAGTTGGGCGGAGAGGACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
CDS CCA 72 bp CACCTTCTTGCTCTGAGACAGCACCAGACTTTCCACTaGCTCCTGGTCAAACACCTGCAGTTCCTCCACCAT +
Preference number: 6 (lower is better)
Translates to: HLLALRQHQTFH*LLVKHLQFLHH
Trigger: ATGGTGGAGGAACTGCAGGTGTTTGACCAGGAGCCAGTGGAAAGTCTGGTGCTGTCTCAGAGCAAGAAGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
CDS CAA 72 bp TTTCTTCTCAGCTGGAGCCTCCCAAGAGATCGCTCCTaGCAGCTCCAGAGCCTCTACACTGAAGGCAAACAG +
Preference number: 6 (lower is better)
Translates to: FLLSWSLPRDRS*QLQSLYTEGKQ
Trigger: CTGTTTGCCTTCAGTGTAGAGGCTCTGGAGCTGCAAGGAGCGATCTCTTGGGAGGCTCCAGCTGAGAAGAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
CDS CAA 72 bp CTCCGCCCAACTGTAAACGCACATAACCATTGGCATTaGAGTTCCGACCACCTCCTAGGTGGAGCCGAGTTG +
Preference number: 6 (lower is better)
Translates to: LRPTVNAHNHWH*SSDHLLGGAEL
Trigger: CAACTCGGCTCCACCTAGGAGGTGGTCGGAACTCAAATGCCAATGGTTATGTGCGTTTACAGTTGGGCGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
CDS CAA 90 bp ACATTCAATTTTCTTCTCAGCTGGAGCCTCCCAAGAGATCGCTCCTaGCAGCTCCAGAGCCTCTACACTGAAGGCAAACAGCGCCTCTCG +
Preference number: 6 (lower is better)
Translates to: TFNFLLSWSLPRDRS*QLQSLYTEGKQRLS
Trigger: CGAGAGGCGCTGTTTGCCTTCAGTGTAGAGGCTCTGGAGCTGCAAGGAGCGATCTCTTGGGAGGCTCCAGCTGAGAAGAAAATTGAATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
CDS CCA 72 bp CACAAGGAGTCCGGTGTGACCCTTAGCTGGGTCATATaGGCATTTACCCTTCCCATCCTCAAATTCTGCACG +
Preference number: 6 (lower is better)
Translates to: HKESGVTLSWVI*AFTLPILKFCT
Trigger: CGTGCAGAATTTGAGGATGGGAAGGGTAAATGCCCATATGACCCAGCTAAGGGTCACACCGGACTCCTTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
CDS CCA 72 bp AGCCAAAAAGCCAGGTACTCTGTCTTGATGGAGTGGTaGGTCCCCATGTATCGAAGGATAACCGGCTCTGTG +
Preference number: 6 (lower is better)
Translates to: SQKARYSVLMEW*VPMYRRITGSV
Trigger: CACAGAGCCGGTTATCCTTCGATACATGGGGACCCACCACTCCATCAAGACAGAGTACCTGGCTTTTTGGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
CDS CCA 72 bp AATGAACAACACTGTATAGGTGGCACCATCAAGCCCTaGGACCCTGTCGGCCACCACGTGTGTGAAGTTAGT +
Preference number: 6 (lower is better)
Translates to: NEQHCIGGTIKP*DPVGHHVCEVS
Trigger: ACTAACTTCACACACGTGGTGGCCGACAGGGTCCCAGGGCTTGATGGTGCCACCTATACAGTGTTGTTCATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
CDS CCA 72 bp TTACACATCTTTGAAGTGTCCAAGTTCGCCACATGTTaGACCAGAAAGGACCCCGAGCGACCACTGGTGGTG +
Preference number: 6 (lower is better)
Translates to: LHIFEVSKFATC*TRKDPERPLVV
Trigger: CACCACCAGTGGTCGCTCGGGGTCCTTTCTGGTCCAACATGTGGCGAACTTGGACACTTCAAAGATGTGTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
CDS CAA 72 bp TATCGAAGGATAACCGGCTCTGTGCCCAGGAAGTTATaGAGTGTGGCTGAGTACAGCTCACCGTCCACAAGG +
Preference number: 6 (lower is better)
Translates to: YRRITGSVPRKL*SVAEYSSPSTR
Trigger: CCTTGTGGACGGTGAGCTGTACTCAGCCACACTCAATAACTTCCTGGGCACAGAGCCGGTTATCCTTCGATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
CDS CAA 90 bp CTTCTGGGCTTGCTCACTGTACTCCTTGTAGGGACCCTCAAACACTaGCTGGATCTGTTCCAACTGGTACTCACAAACTGCAGACAGGTC +
Preference number: 6 (lower is better)
Translates to: LLGLLTVLLVGTLKH*LDLFQLVLTNCRQV
Trigger: GACCTGTCTGCAGTTTGTGAGTACCAGTTGGAACAGATCCAGCAAGTGTTTGAGGGTCCCTACAAGGAGTACAGTGAGCAAGCCCAGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
CDS GCA 72 bp CACTTGCTGGATCTGTTCCAACTGGTACTCACAAACTaGAGACAGGTCCATATCGCCCCATCGCGCTTGAAA +
Preference number: 6 (lower is better)
Translates to: HLLDLFQLVLTN*RQVHIAPSRLK
Trigger: TTTCAAGCGCGATGGGGCGATATGGACCTGTCTGCAGTTTGTGAGTACCAGTTGGAACAGATCCAGCAAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
CDS CCA 72 bp TTCAGCCAAAAAGCCAGGTACTCTGTCTTGATGGAGTaGTGGGTCCCCATGTATCGAAGGATAACCGGCTCT +
Preference number: 6 (lower is better)
Translates to: FSQKARYSVLME*WVPMYRRITGS
Trigger: AGAGCCGGTTATCCTTCGATACATGGGGACCCACCACTCCATCAAGACAGAGTACCTGGCTTTTTGGCTGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
CDS CAA 72 bp TTGCTCACTGTACTCCTTGTAGGGACCCTCAAACACTaGCTGGATCTGTTCCAACTGGTACTCACAAACTGC +
Preference number: 6 (lower is better)
Translates to: LLTVLLVGTLKH*LDLFQLVLTNC
Trigger: GCAGTTTGTGAGTACCAGTTGGAACAGATCCAGCAAGTGTTTGAGGGTCCCTACAAGGAGTACAGTGAGCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6
CDS GCA 72 bp GTCATATGGGCATTTACCCTTCCCATCCTCAAATTCTaGACGGTCCAAGGTGAACGTGAGCATGTTGATGTA +
Preference number: 6 (lower is better)
Translates to: VIWAFTLPILKF*TVQGEREHVDV
Trigger: TACATCAACATGCTCACGTTCACCTTGGACCGTGCAGAATTTGAGGATGGGAAGGGTAAATGCCCATATGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000114991.8
ENSMUST00000191642.6
ENSMUST00000191677.6
ENSMUST00000195620.6