Pregenerated sensors for SEMA3G (Mus musculus)
Ensembl gene IDs: ENSMUSG00000021904Ensembl transcript IDs: ENSMUST00000090180.4
Found 210 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR TCA 90 bp | AGTTCCAGCCCGGGACTGAGAACTCGGAGAAAGGCAGGGGTAGGCTaGGGTGCAAGGCTCCTCCCACCAACCCCTAGTCTTTCCTGTAGG | + |
Preference number: 1 (lower is better) Translates to: SSSPGLRTRRKAGVG*GARLLPPTPSLSCR Trigger: CCTACAGGAAAGACTAGGGGTTGGTGGGAGGAGCCTTGCACCTCAGCCTACCCCTGCCTTTCTCCGAGTTCTCAGTCCCGGGCTGGAACT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090180.4 |
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3UTR TCA 90 bp | ACTGGCTGCTGGTTTTCAGAGTGTCCGTTGCTAACCTCACCGGCCTaGGCATGCCCGCCTCACCCTCGGAAAGGTAGCCCATCCTTCGAG | + |
Preference number: 1 (lower is better) Translates to: TGCWFSECPLLTSPA*ACPPHPRKGSPSFE Trigger: CTCGAAGGATGGGCTACCTTTCCGAGGGTGAGGCGGGCATGCTCAGGCCGGTGAGGTTAGCAACGGACACTCTGAAAACCAGCAGCCAGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090180.4 |
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3UTR TCA 90 bp | CAGAACCTTCCCCTGGTCCCAGGAAGACACTCTGATGGTGAGGTGTaGGCACCCCAGCAAGCCTGGCCTGACAATGTGGGACCTGGGAAA | + |
Preference number: 1 (lower is better) Translates to: QNLPLVPGRHSDGEV*APQQAWPDNVGPGK Trigger: TTTCCCAGGTCCCACATTGTCAGGCCAGGCTTGCTGGGGTGCTCACACCTCACCATCAGAGTGTCTTCCTGGGACCAGGGGAAGGTTCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090180.4 |
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3UTR CCA 90 bp | TGGCCATTGTTCAGCAAGCTGGGAAAGAACCACCCGCCTTGCCTCTaGGCACAACCGGAAATGTGCTCCGGAAGCCACACCATCTCTGAG | + |
Preference number: 1 (lower is better) Translates to: WPLFSKLGKNHPPCL*AQPEMCSGSHTISE Trigger: CTCAGAGATGGTGTGGCTTCCGGAGCACATTTCCGGTTGTGCCCAGAGGCAAGGCGGGTGGTTCTTTCCCAGCTTGCTGAACAATGGCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090180.4 |
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3UTR TCA 90 bp | CCTCTGGGCACAACCGGAAATGTGCTCCGGAAGCCACACCATCTCTaGGAACAAATAGCAGGCCCCTTGGGACTACAAGTGGTCTGGAGG | + |
Preference number: 1 (lower is better) Translates to: PLGTTGNVLRKPHHL*EQIAGPLGLQVVWR Trigger: CCTCCAGACCACTTGTAGTCCCAAGGGGCCTGCTATTTGTTCTCAGAGATGGTGTGGCTTCCGGAGCACATTTCCGGTTGTGCCCAGAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090180.4 |
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3UTR GCA 90 bp | TCAGAATGGCCATTGTTCAGCAAGCTGGGAAAGAACCACCCGCCTTaGCTCTGGGCACAACCGGAAATGTGCTCCGGAAGCCACACCATC | + |
Preference number: 1 (lower is better) Translates to: SEWPLFSKLGKNHPP*LWAQPEMCSGSHTI Trigger: GATGGTGTGGCTTCCGGAGCACATTTCCGGTTGTGCCCAGAGGCAAGGCGGGTGGTTCTTTCCCAGCTTGCTGAACAATGGCCATTCTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090180.4 |
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3UTR CCA 90 bp | AGTATCTGGCCTGCCCAGGGGCTCCTGAACCAACTAATGTCACCTTaGCTCTTGAGGACACCTGCTCATGGACCCATGGACCCATGGTCT | + |
Preference number: 1 (lower is better) Translates to: SIWPAQGLLNQLMSP*LLRTPAHGPMDPWS Trigger: AGACCATGGGTCCATGGGTCCATGAGCAGGTGTCCTCAAGAGCCAAGGTGACATTAGTTGGTTCAGGAGCCCCTGGGCAGGCCAGATACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090180.4 |
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3UTR CCA 90 bp | ACACCCACTCAGAGGGTCACTCAGAATGGCCATTGTTCAGCAAGCTaGGAAAGAACCACCCGCCTTGCCTCTGGGCACAACCGGAAATGT | + |
Preference number: 1 (lower is better) Translates to: TPTQRVTQNGHCSAS*ERTTRLASGHNRKC Trigger: ACATTTCCGGTTGTGCCCAGAGGCAAGGCGGGTGGTTCTTTCCCAGCTTGCTGAACAATGGCCATTCTGAGTGACCCTCTGAGTGGGTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090180.4 |
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3UTR CCA 90 bp | CCTGAACCAACTAATGTCACCTTGGCTCTTGAGGACACCTGCTCATaGACCCATGGACCCATGGTCTCACCTCTCTCTAGTTCCTCGTGG | + |
Preference number: 1 (lower is better) Translates to: PEPTNVTLALEDTCS*THGPMVSPLSSSSW Trigger: CCACGAGGAACTAGAGAGAGGTGAGACCATGGGTCCATGGGTCCATGAGCAGGTGTCCTCAAGAGCCAAGGTGACATTAGTTGGTTCAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090180.4 |
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3UTR TCA 90 bp | AAGCCTGGCCTGACAATGTGGGACCTGGGAAAGGGTATCATATTGTaGGACAACTCTTCCAAGTTTAAAAAGGGGGCAAGGGCCAGGCCC | + |
Preference number: 1 (lower is better) Translates to: KPGLTMWDLGKGIIL*DNSSKFKKGARARP Trigger: GGGCCTGGCCCTTGCCCCCTTTTTAAACTTGGAAGAGTTGTCTCACAATATGATACCCTTTCCCAGGTCCCACATTGTCAGGCCAGGCTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000090180.4 |
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3UTR GCA 90 bp | ACTCCTCTCTCGTCTTCTTTTATCTACCAGTATCCCAAGGGACCATaGCCACAAACAGAAGGAAGCTGGGTTTGGGCAGGTAGAGTTCAG | + |
Preference number: 1 (lower is better) Translates to: TPLSSSFIYQYPKGP*PQTEGSWVWAGRVQ Trigger: CTGAACTCTACCTGCCCAAACCCAGCTTCCTTCTGTTTGTGGGCATGGTCCCTTGGGATACTGGTAGATAAAAGAAGACGAGAGAGGAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090180.4 |
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3UTR CCA 90 bp | TGTCCTCCAGATAAGCAAATGGTGCAAGTTCAGATCTCAGCACCCTaGGGGTGCCAGGGTAGAGGAAATAAACCCAAAGTCTTCGGGTTT | + |
Preference number: 1 (lower is better) Translates to: CPPDKQMVQVQISAP*GCQGRGNKPKVFGF Trigger: AAACCCGAAGACTTTGGGTTTATTTCCTCTACCCTGGCACCCCCAGGGTGCTGAGATCTGAACTTGCACCATTTGCTTATCTGGAGGACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090180.4 |
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3UTR GCA 90 bp | CCAGATAAGCAAATGGTGCAAGTTCAGATCTCAGCACCCTGGGGGTaGCAGGGTAGAGGAAATAAACCCAAAGTCTTCGGGTTTGAAGTT | + |
Preference number: 1 (lower is better) Translates to: PDKQMVQVQISAPWG*QGRGNKPKVFGFEV Trigger: AACTTCAAACCCGAAGACTTTGGGTTTATTTCCTCTACCCTGGCACCCCCAGGGTGCTGAGATCTGAACTTGCACCATTTGCTTATCTGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000090180.4 |
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3UTR-3UTR CCA 90 bp | CGGCCTGAGCATGCCCGCCTCACCCTCGGAAAGGTAGCCCATCCTTCGAGGCACCCCACTTCCTCTTTCTaGTCCACAGAACCTTCCCCT | + |
Preference number: 2 (lower is better) Translates to: RPEHARLTLGKVAHPSRHPTSSF*STEPSP Trigger: AGGGGAAGGTTCTGTGGACCAGAAAGAGGAAGTGGG...GTGCCTCGAAGGATGGGCTACCTTTCCGAGGGTGAGGCGGGCATGCTCAGGCCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090180.4 |
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3UTR-3UTR CCA 90 bp | GAAACTGCTGATGGCCAAGCTTCTCCCCAGCCCTTGTCACTCAGCCCCACCCCCCACAGAACCTTCCCCTaGTCCCAGGAAGACACTCTG | + |
Preference number: 2 (lower is better) Translates to: ETADGQASPQPLSLSPTPHRTFP*SQEDTL Trigger: CAGAGTGTCTTCCTGGGACCAGGGGAAGGTTCTGTG...GGGGGTGGGGCTGAGTGACAAGGGCTGGGGAGAAGCTTGGCCATCAGCAGTTTC 60% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000090180.4 |
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3UTR-3UTR TCA 90 bp | GAGACAGATAAACAGCACAACCCCACCTCCTCAGCGCCTCCACCTTCTCTCACAAAGGCAGGGGTAGGCTaGGGTGCAAGGCTCCTCCCA | + |
Preference number: 2 (lower is better) Translates to: ETDKQHNPTSSAPPPSLTKAGVG*GARLLP Trigger: TGGGAGGAGCCTTGCACCTCAGCCTACCCCTGCCTT...TGTGAGAGAAGGTGGAGGCGCTGAGGAGGTGGGGTTGTGCTGTTTATCTGTCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090180.4 |
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3UTR-3UTR CCA 90 bp | CAGTTCCAGCCCGGGACTGAGAACTCGGAGAAAGGCAGGGGTAGGCTGAGGTGCCTCCTCTTTCCTAGCTaGGTGGGAGAGAGATACCGT | + |
Preference number: 2 (lower is better) Translates to: QFQPGTENSEKGRGRLRCLLFPS*VGERYR Trigger: ACGGTATCTCTCTCCCACCCAGCTAGGAAAGAGGAG...GCACCTCAGCCTACCCCTGCCTTTCTCCGAGTTCTCAGTCCCGGGCTGGAACTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090180.4 |
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3UTR CAA 90 bp | CTCAGAATGGCCATTGTTCAGCAAGCTGGGAAAGAACCACCCGCCTaGCCTCTGGGCACAACCGGAAATGTGCTCCGGAAGCCACACCAT | + |
Preference number: 2 (lower is better) Translates to: LRMAIVQQAGKEPPA*PLGTTGNVLRKPHH Trigger: ATGGTGTGGCTTCCGGAGCACATTTCCGGTTGTGCCCAGAGGCAAGGCGGGTGGTTCTTTCCCAGCTTGCTGAACAATGGCCATTCTGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090180.4 |
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3UTR CAA 90 bp | AAGTATCTGGCCTGCCCAGGGGCTCCTGAACCAACTAATGTCACCTaGGCTCTTGAGGACACCTGCTCATGGACCCATGGACCCATGGTC | + |
Preference number: 2 (lower is better) Translates to: KYLACPGAPEPTNVT*ALEDTCSWTHGPMV Trigger: GACCATGGGTCCATGGGTCCATGAGCAGGTGTCCTCAAGAGCCAAGGTGACATTAGTTGGTTCAGGAGCCCCTGGGCAGGCCAGATACTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090180.4 |
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3UTR-3UTR GCA 90 bp | AAGCAAATGGTGCAAGTTCAGATCTCAGCACCCTGGGGGTGCCAGGGTAGAGGAAAGAACCACCCGCCTTaGCTCTGGGCACAACCGGAA | + |
Preference number: 2 (lower is better) Translates to: KQMVQVQISAPWGCQGRGKNHPP*LWAQPE Trigger: TTCCGGTTGTGCCCAGAGGCAAGGCGGGTGGTTCTT...TCCTCTACCCTGGCACCCCCAGGGTGCTGAGATCTGAACTTGCACCATTTGCTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000090180.4 |
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3UTR-3UTR CCA 90 bp | CACCCTGGGGGTGCCAGGGTAGAGGAAATAAACCCAAAGTCTTCGGGTTTGAAGTCTGTGAGTAGGAGATaGGAGGGAGCTGAGGCAGGG | + |
Preference number: 2 (lower is better) Translates to: HPGGARVEEINPKSSGLKSVSRR*EGAEAG Trigger: CCCTGCCTCAGCTCCCTCCCATCTCCTACTCACAGA...CTTCAAACCCGAAGACTTTGGGTTTATTTCCTCTACCCTGGCACCCCCAGGGTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000090180.4 |
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3UTR-3UTR CCA 90 bp | CAAACAGAAGGAAGCTGGGTTTGGGCAGGTAGAGTTCAGGGCTTCTGTCCTCCAGAGGACACCTGCTCATaGACCCATGGACCCATGGTC | + |
Preference number: 2 (lower is better) Translates to: QTEGSWVWAGRVQGFCPPEDTCS*THGPMV Trigger: GACCATGGGTCCATGGGTCCATGAGCAGGTGTCCTC...TGGAGGACAGAAGCCCTGAACTCTACCTGCCCAAACCCAGCTTCCTTCTGTTTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090180.4 |
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3UTR-3UTR GCA 90 bp | TCTAGATTCCAAAGCATGGAGACAGATAAACAGCACAACCCCACCTCCTCAGCGCAAGTGGTCTGGAGGTaGCAGTTCCAGCCCGGGACT | + |
Preference number: 2 (lower is better) Translates to: SRFQSMETDKQHNPTSSAQVVWR*QFQPGT Trigger: AGTCCCGGGCTGGAACTGGCACCTCCAGACCACTTG...CGCTGAGGAGGTGGGGTTGTGCTGTTTATCTGTCTCCATGCTTTGGAATCTAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090180.4 |
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3UTR-3UTR GCA 90 bp | AAGCAAATGGTGCAAGTTCAGATCTCAGCACCCTGGGGGTGCCAGGGTAGAGGAATCCTCACCACTGGCTaGTGGTTTTCAGAGTGTCCG | + |
Preference number: 2 (lower is better) Translates to: KQMVQVQISAPWGCQGRGILTTG*WFSECP Trigger: CGGACACTCTGAAAACCAGCAGCCAGTGGTGAGGAT...TCCTCTACCCTGGCACCCCCAGGGTGCTGAGATCTGAACTTGCACCATTTGCTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000090180.4 |
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3UTR-3UTR CCA 90 bp | CACAACCCCACCTCCTCAGCGCCTCCACCTTCTCTCACACCTCTGTGGGGCAAGAGTCTTTCCTGTAGGTaGTGGAGATTTCCTCTAAGA | + |
Preference number: 2 (lower is better) Translates to: HNPTSSAPPPSLTPLWGKSLSCR*WRFPLR Trigger: TCTTAGAGGAAATCTCCACCACCTACAGGAAAGACT...CTTGCCCCACAGAGGTGTGAGAGAAGGTGGAGGCGCTGAGGAGGTGGGGTTGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090180.4 |
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3UTR-3UTR CCA 90 bp | TCTAGATTCCAAAGCATGGAGACAGATAAACAGCACAACCCCACCTCCTCAGCGCACCCGCCTTGCCTCTaGGCACAACCGGAAATGTGC | + |
Preference number: 2 (lower is better) Translates to: SRFQSMETDKQHNPTSSAHPPCL*AQPEMC Trigger: GCACATTTCCGGTTGTGCCCAGAGGCAAGGCGGGTG...CGCTGAGGAGGTGGGGTTGTGCTGTTTATCTGTCTCCATGCTTTGGAATCTAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090180.4 |
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3UTR-3UTR TCA 90 bp | TGGGTTTGGGCAGGTAGAGTTCAGGGCTTCTGTCCTCCAGATAAGCAAATGGTGGAGATGGGAGGGAGCTaGGGCAGGGAATCATCTAGA | + |
Preference number: 2 (lower is better) Translates to: WVWAGRVQGFCPPDKQMVEMGGS*GRESSR Trigger: TCTAGATGATTCCCTGCCTCAGCTCCCTCCCATCTC...CACCATTTGCTTATCTGGAGGACAGAAGCCCTGAACTCTACCTGCCCAAACCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090180.4 |
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3UTR-3UTR TCA 90 bp | ACCCCCAGAACAGCAGGATTTACCATACCAGCTTTCTGTTCTCCCATAGAGAGATCTGATGGTGAGGTGTaGGCACCCCAGCAAGCCTGG | + |
Preference number: 2 (lower is better) Translates to: TPRTAGFTIPAFCSPIERSDGEV*APQQAW Trigger: CCAGGCTTGCTGGGGTGCTCACACCTCACCATCAGA...TCTCTCTATGGGAGAACAGAAAGCTGGTATGGTAAATCCTGCTGTTCTGGGGGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000090180.4 |
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3UTR-3UTR CCA 90 bp | GAACAAATAGCAGGCCCCTTGGGACTACAAGTGGTCTGGAGGTGCCAGTTCCAGTCTTTCCTAGCTGGGTaGGAGAGAGATACCGTTGAG | + |
Preference number: 2 (lower is better) Translates to: EQIAGPLGLQVVWRCQFQSFLAG*ERDTVE Trigger: CTCAACGGTATCTCTCTCCCACCCAGCTAGGAAAGA...CTGGAACTGGCACCTCCAGACCACTTGTAGTCCCAAGGGGCCTGCTATTTGTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090180.4 |
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3UTR-3UTR CCA 90 bp | ATGGTGCAAGTTCAGATCTCAGCACCCTGGGGGTGCCAGGGTAGAGGAAATAAAGCCGATCCTCACCACTaGCTGCTGGTTTTCAGAGTG | + |
Preference number: 2 (lower is better) Translates to: MVQVQISAPWGCQGRGNKADPHH*LLVFRV Trigger: CACTCTGAAAACCAGCAGCCAGTGGTGAGGATCGGC...TTTATTTCCTCTACCCTGGCACCCCCAGGGTGCTGAGATCTGAACTTGCACCAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000090180.4 |
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3UTR-3UTR CCA 90 bp | ATGGTGCAAGTTCAGATCTCAGCACCCTGGGGGTGCCAGGGTAGAGGAAATAAACTGCTCATGGACCCATaGACCCATGGTCTCACCTCT | + |
Preference number: 2 (lower is better) Translates to: MVQVQISAPWGCQGRGNKLLMDP*THGLTS Trigger: AGAGGTGAGACCATGGGTCCATGGGTCCATGAGCAG...TTTATTTCCTCTACCCTGGCACCCCCAGGGTGCTGAGATCTGAACTTGCACCAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000090180.4 |
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3UTR-3UTR GCA 90 bp | TCTGTGGGGCAAGTGTTTCTTATCAGGTTCTACCTTAGGAATCTACTTTCCCCTAGGGGTAGGCTGAGGTaGAAGGCTCCTCCCACCAAC | + |
Preference number: 2 (lower is better) Translates to: SVGQVFLIRFYLRNLLSPRGRLR*KAPPTN Trigger: GTTGGTGGGAGGAGCCTTGCACCTCAGCCTACCCCT...AGGGGAAAGTAGATTCCTAAGGTAGAACCTGATAAGAAACACTTGCCCCACAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000090180.4 |
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3UTR CAA 90 bp | AATTCAATAAGTATGCTTGGAAGACGGAGAAGCCACAAGGCCCATTaGAAAACAGACACAGTTCACACATGTGGGCGTTTTCAGGGTGTT | + |
Preference number: 2 (lower is better) Translates to: NSISMLGRRRSHKAH*KTDTVHTCGRFQGV Trigger: AACACCCTGAAAACGCCCACATGTGTGAACTGTGTCTGTTTTCAAATGGGCCTTGTGGCTTCTCCGTCTTCCAAGCATACTTATTGAATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090180.4 |
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3UTR-3UTR CCA 90 bp | GCTCTGCTTTTTCTCATCAGAACTCAAGGCAACATGACAATAAAAATATCAACACCTTGGGACTACAAGTaGTCTGGAGGTGCCAGTTCC | + |
Preference number: 2 (lower is better) Translates to: ALLFLIRTQGNMTIKISTPWDYK*SGGASS Trigger: GGAACTGGCACCTCCAGACCACTTGTAGTCCCAAGG...TGTTGATATTTTTATTGTCATGTTGCCTTGAGTTCTGATGAGAAAAAGCAGAGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000090180.4 |
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3UTR-3UTR GCA 90 bp | GCTCTGCTTTTTCTCATCAGAACTCAAGGCAACATGACAATAAAAATATCAACATCAGCACCCTGGGGGTaGCAGGGTAGAGGAAATAAA | + |
Preference number: 2 (lower is better) Translates to: ALLFLIRTQGNMTIKISTSAPWG*QGRGNK Trigger: TTTATTTCCTCTACCCTGGCACCCCCAGGGTGCTGA...TGTTGATATTTTTATTGTCATGTTGCCTTGAGTTCTGATGAGAAAAAGCAGAGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000090180.4 |
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3UTR TCA 72 bp | CTCCTCTTTCCTAGCTGGGTGGGAGAGAGATACCGTTaGGTCCCCCAGCCCAGCCCGACCACCTGCTCCTCA | + |
Preference number: 3 (lower is better) Translates to: LLFPSWVGERYR*VPQPSPTTCSS Trigger: TGAGGAGCAGGTGGTCGGGCTGGGCTGGGGGACTCAACGGTATCTCTCTCCCACCCAGCTAGGAAAGAGGAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000090180.4 |
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3UTR-3UTR CAA 90 bp | AAGCAAATGGTGCAAGTTCAGATCTCAGCACCCTGGGGGTGCCAGGGTAGAGGAGCTTCTCCCCAGCCCTaGTCACTCAGCCCCACCCCC | + |
Preference number: 3 (lower is better) Translates to: KQMVQVQISAPWGCQGRGASPQP*SLSPTP Trigger: GGGGGTGGGGCTGAGTGACAAGGGCTGGGGAGAAGC...TCCTCTACCCTGGCACCCCCAGGGTGCTGAGATCTGAACTTGCACCATTTGCTT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000090180.4 |
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3UTR TCA 72 bp | CCGGGACTGAGAACTCGGAGAAAGGCAGGGGTAGGCTaGGGTGCAAGGCTCCTCCCACCAACCCCTAGTCTT | + |
Preference number: 3 (lower is better) Translates to: PGLRTRRKAGVG*GARLLPPTPSL Trigger: AAGACTAGGGGTTGGTGGGAGGAGCCTTGCACCTCAGCCTACCCCTGCCTTTCTCCGAGTTCTCAGTCCCGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090180.4 |
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3UTR TCA 72 bp | CAGGCAACCTCCAGGTCCCAGCAGTTCCTGCCTCTGTaGGTAGGAGATGGGAGGGAGCTGAGGCAGGGAATC | + |
Preference number: 3 (lower is better) Translates to: QATSRSQQFLPL*VGDGRELRQGI Trigger: GATTCCCTGCCTCAGCTCCCTCCCATCTCCTACTCACAGAGGCAGGAACTGCTGGGACCTGGAGGTTGCCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090180.4 |
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3UTR-3UTR CAA 90 bp | GAACAAATAGCAGGCCCCTTGGGACTACAAGTGGTCTGGAGGTGCCAGTTCCAGGGGAGAGAGATACCGTaGAGTCCCCCAGCCCAGCCC | + |
Preference number: 3 (lower is better) Translates to: EQIAGPLGLQVVWRCQFQGREIP*SPPAQP Trigger: GGGCTGGGCTGGGGGACTCAACGGTATCTCTCTCCC...CTGGAACTGGCACCTCCAGACCACTTGTAGTCCCAAGGGGCCTGCTATTTGTTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000090180.4 |
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3UTR CCA 72 bp | TTCAGCAAGCTGGGAAAGAACCACCCGCCTTGCCTCTaGGCACAACCGGAAATGTGCTCCGGAAGCCACACC | + |
Preference number: 3 (lower is better) Translates to: FSKLGKNHPPCL*AQPEMCSGSHT Trigger: GGTGTGGCTTCCGGAGCACATTTCCGGTTGTGCCCAGAGGCAAGGCGGGTGGTTCTTTCCCAGCTTGCTGAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090180.4 |
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3UTR CCA 72 bp | ACAAAGCCCAGGAGGCCGATCCTCACCACTGGCTGCTaGTTTTCAGAGTGTCCGTTGCTAACCTCACCGGCC | + |
Preference number: 3 (lower is better) Translates to: TKPRRPILTTGC*FSECPLLTSPA Trigger: GGCCGGTGAGGTTAGCAACGGACACTCTGAAAACCAGCAGCCAGTGGTGAGGATCGGCCTCCTGGGCTTTGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090180.4 |
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3UTR GCA 72 bp | ATAGCAGGCCCCTTGGGACTACAAGTGGTCTGGAGGTaGCAGTTCCAGCCCGGGACTGAGAACTCGGAGAAA | + |
Preference number: 3 (lower is better) Translates to: IAGPLGLQVVWR*QFQPGTENSEK Trigger: TTTCTCCGAGTTCTCAGTCCCGGGCTGGAACTGGCACCTCCAGACCACTTGTAGTCCCAAGGGGCCTGCTAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090180.4 |
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3UTR GCA 72 bp | CCATTGTTCAGCAAGCTGGGAAAGAACCACCCGCCTTaGCTCTGGGCACAACCGGAAATGTGCTCCGGAAGC | + |
Preference number: 3 (lower is better) Translates to: PLFSKLGKNHPP*LWAQPEMCSGS Trigger: GCTTCCGGAGCACATTTCCGGTTGTGCCCAGAGGCAAGGCGGGTGGTTCTTTCCCAGCTTGCTGAACAATGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090180.4 |
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3UTR CCA 72 bp | CAATCAGGAGTTCTGGACTCCTCTTTCCTAGCTGGGTaGGAGAGAGATACCGTTGAGTCCCCCAGCCCAGCC | + |
Preference number: 3 (lower is better) Translates to: QSGVLDSSFLAG*ERDTVESPSPA Trigger: GGCTGGGCTGGGGGACTCAACGGTATCTCTCTCCCACCCAGCTAGGAAAGAGGAGTCCAGAACTCCTGATTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000090180.4 |
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3UTR CCA 72 bp | GAACAAATAGCAGGCCCCTTGGGACTACAAGTGGTCTaGAGGTGCCAGTTCCAGCCCGGGACTGAGAACTCG | + |
Preference number: 3 (lower is better) Translates to: EQIAGPLGLQVV*RCQFQPGTENS Trigger: CGAGTTCTCAGTCCCGGGCTGGAACTGGCACCTCCAGACCACTTGTAGTCCCAAGGGGCCTGCTATTTGTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090180.4 |
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3UTR CCA 72 bp | GCCCTAGACAAAGCCCAGGAGGCCGATCCTCACCACTaGCTGCTGGTTTTCAGAGTGTCCGTTGCTAACCTC | + |
Preference number: 3 (lower is better) Translates to: ALDKAQEADPHH*LLVFRVSVANL Trigger: GAGGTTAGCAACGGACACTCTGAAAACCAGCAGCCAGTGGTGAGGATCGGCCTCCTGGGCTTTGTCTAGGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090180.4 |
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3UTR CCA 72 bp | CCCCACTTCCTCTTTCTGGTCCACAGAACCTTCCCCTaGTCCCAGGAAGACACTCTGATGGTGAGGTGTGAG | + |
Preference number: 3 (lower is better) Translates to: PHFLFLVHRTFP*SQEDTLMVRCE Trigger: CTCACACCTCACCATCAGAGTGTCTTCCTGGGACCAGGGGAAGGTTCTGTGGACCAGAAAGAGGAAGTGGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090180.4 |
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3UTR CCA 72 bp | CTCTTGAGGACACCTGCTCATGGACCCATGGACCCATaGTCTCACCTCTCTCTAGTTCCTCGTGGCCCTAGA | + |
Preference number: 3 (lower is better) Translates to: LLRTPAHGPMDP*SHLSLVPRGPR Trigger: TCTAGGGCCACGAGGAACTAGAGAGAGGTGAGACCATGGGTCCATGGGTCCATGAGCAGGTGTCCTCAAGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090180.4 |
||
3UTR CCA 72 bp | TGTGGGCGTTTTCAGGGTGTTCGTAGTACAGTACCGTaGGCAAGGTGGCAGTGGGCAAGAGCTGTCCTATGT | + |
Preference number: 3 (lower is better) Translates to: CGRFQGVRSTVP*ARWQWARAVLC Trigger: ACATAGGACAGCTCTTGCCCACTGCCACCTTGCCCACGGTACTGTACTACGAACACCCTGAAAACGCCCACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090180.4 |
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3UTR GCA 72 bp | GAACCAACTAATGTCACCTTGGCTCTTGAGGACACCTaGTCATGGACCCATGGACCCATGGTCTCACCTCTC | + |
Preference number: 3 (lower is better) Translates to: EPTNVTLALEDT*SWTHGPMVSPL Trigger: GAGAGGTGAGACCATGGGTCCATGGGTCCATGAGCAGGTGTCCTCAAGAGCCAAGGTGACATTAGTTGGTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090180.4 |
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3UTR GCA 72 bp | TCCTGTGTTTTCCAGGGCCATTTCCCCAGAGGACCCTaGCCAGAGCTTGCCAAACCTAGACTCTGTCCAAAT | + |
Preference number: 3 (lower is better) Translates to: SCVFQGHFPRGP*PELAKPRLCPN Trigger: ATTTGGACAGAGTCTAGGTTTGGCAAGCTCTGGGCAGGGTCCTCTGGGGAAATGGCCCTGGAAAACACAGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090180.4 |
||
3UTR CCA 72 bp | TATCCCAAGGGACCATGCCCACAAACAGAAGGAAGCTaGGTTTGGGCAGGTAGAGTTCAGGGCTTCTGTCCT | + |
Preference number: 3 (lower is better) Translates to: YPKGPCPQTEGS*VWAGRVQGFCP Trigger: AGGACAGAAGCCCTGAACTCTACCTGCCCAAACCCAGCTTCCTTCTGTTTGTGGGCATGGTCCCTTGGGATA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090180.4 |
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3UTR TCA 72 bp | ACAACCGGAAATGTGCTCCGGAAGCCACACCATCTCTaGGAACAAATAGCAGGCCCCTTGGGACTACAAGTG | + |
Preference number: 3 (lower is better) Translates to: TTGNVLRKPHHL*EQIAGPLGLQV Trigger: CACTTGTAGTCCCAAGGGGCCTGCTATTTGTTCTCAGAGATGGTGTGGCTTCCGGAGCACATTTCCGGTTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090180.4 |
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3UTR GCA 72 bp | CAAATGGTGCAAGTTCAGATCTCAGCACCCTGGGGGTaGCAGGGTAGAGGAAATAAACCCAAAGTCTTCGGG | + |
Preference number: 3 (lower is better) Translates to: QMVQVQISAPWG*QGRGNKPKVFG Trigger: CCCGAAGACTTTGGGTTTATTTCCTCTACCCTGGCACCCCCAGGGTGCTGAGATCTGAACTTGCACCATTTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000090180.4 |
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3UTR CCA 72 bp | ACCTCCTCAGCGCCTCCACCTTCTCTCACACCTCTGTaGGGCAAGTGTTTCTTATCAGGTTCTACCTTAGGA | + |
Preference number: 3 (lower is better) Translates to: TSSAPPPSLTPL*GKCFLSGSTLG Trigger: TCCTAAGGTAGAACCTGATAAGAAACACTTGCCCCACAGAGGTGTGAGAGAAGGTGGAGGCGCTGAGGAGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090180.4 |
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3UTR CCA 72 bp | ACTAATGTCACCTTGGCTCTTGAGGACACCTGCTCATaGACCCATGGACCCATGGTCTCACCTCTCTCTAGT | + |
Preference number: 3 (lower is better) Translates to: TNVTLALEDTCS*THGPMVSPLSS Trigger: ACTAGAGAGAGGTGAGACCATGGGTCCATGGGTCCATGAGCAGGTGTCCTCAAGAGCCAAGGTGACATTAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090180.4 |
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3UTR-3UTR CAA 90 bp | TGGGTTTGGGCAGGTAGAGTTCAGGGCTTCTGTCCTCCAGATAAGCAAATGGTGATGTCACCTTGGCTCTaGAGGACACCTGCTCATGGA | + |
Preference number: 3 (lower is better) Translates to: WVWAGRVQGFCPPDKQMVMSPWL*RTPAHG Trigger: TCCATGAGCAGGTGTCCTCAAGAGCCAAGGTGACAT...CACCATTTGCTTATCTGGAGGACAGAAGCCCTGAACTCTACCTGCCCAAACCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090180.4 |
||
3UTR CCA 72 bp | GGAGCTGAGGCAGGGAATCATCTAGATTCCAAAGCATaGAGACAGATAAACAGCACAACCCCACCTCCTCAG | + |
Preference number: 3 (lower is better) Translates to: GAEAGNHLDSKA*RQINSTTPPPQ Trigger: CTGAGGAGGTGGGGTTGTGCTGTTTATCTGTCTCCATGCTTTGGAATCTAGATGATTCCCTGCCTCAGCTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090180.4 |
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3UTR GCA 72 bp | TCGTCTTCTTTTATCTACCAGTATCCCAAGGGACCATaGCCACAAACAGAAGGAAGCTGGGTTTGGGCAGGT | + |
Preference number: 3 (lower is better) Translates to: SSSFIYQYPKGP*PQTEGSWVWAG Trigger: ACCTGCCCAAACCCAGCTTCCTTCTGTTTGTGGGCATGGTCCCTTGGGATACTGGTAGATAAAAGAAGACGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090180.4 |
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3UTR CCA 72 bp | AGGCTCCTCCCACCAACCCCTAGTCTTTCCTGTAGGTaGTGGAGATTTCCTCTAAGAGGTAATCAATCAGGA | + |
Preference number: 3 (lower is better) Translates to: RLLPPTPSLSCR*WRFPLRGNQSG Trigger: TCCTGATTGATTACCTCTTAGAGGAAATCTCCACCACCTACAGGAAAGACTAGGGGTTGGTGGGAGGAGCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090180.4 |
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3UTR CCA 72 bp | GATAAGCAAATGGTGCAAGTTCAGATCTCAGCACCCTaGGGGTGCCAGGGTAGAGGAAATAAACCCAAAGTC | + |
Preference number: 3 (lower is better) Translates to: DKQMVQVQISAP*GCQGRGNKPKV Trigger: GACTTTGGGTTTATTTCCTCTACCCTGGCACCCCCAGGGTGCTGAGATCTGAACTTGCACCATTTGCTTATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090180.4 |
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3UTR CCA 72 bp | CTCCTCCCACCAACCCCTAGTCTTTCCTGTAGGTGGTaGAGATTTCCTCTAAGAGGTAATCAATCAGGAGTT | + |
Preference number: 3 (lower is better) Translates to: LLPPTPSLSCRW*RFPLRGNQSGV Trigger: AACTCCTGATTGATTACCTCTTAGAGGAAATCTCCACCACCTACAGGAAAGACTAGGGGTTGGTGGGAGGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090180.4 |
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3UTR TCA 72 bp | CTGACAATGTGGGACCTGGGAAAGGGTATCATATTGTaGGACAACTCTTCCAAGTTTAAAAAGGGGGCAAGG | + |
Preference number: 3 (lower is better) Translates to: LTMWDLGKGIIL*DNSSKFKKGAR Trigger: CCTTGCCCCCTTTTTAAACTTGGAAGAGTTGTCTCACAATATGATACCCTTTCCCAGGTCCCACATTGTCAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000090180.4 |
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CDS-3UTR CCA 90 bp | CACAACCCCACCTCCTCAGCGCCTCCACCTTCTCTCACACCTCTGTGGGGCAAGGCAGACGAGGCACACTaGGGCTGGGACCAGGGCTGG | + |
Preference number: 4 (lower is better) Translates to: HNPTSSAPPPSLTPLWGKADEAH*GWDQGW Trigger: CCAGCCCTGGTCCCAGCCCCAGTGTGCCTCGTCTGC...CTTGCCCCACAGAGGTGTGAGAGAAGGTGGAGGCGCTGAGGAGGTGGGGTTGTG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090180.4 |
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CDS-3UTR CCA 90 bp | CGGCCTGAGCATGCCCGCCTCACCCTCGGAAAGGTAGCCCATCCTTCGAGGCACGCCAAAGGGTCGGCCTaGCTGTGCGGTCATCTTGCT | + |
Preference number: 4 (lower is better) Translates to: RPEHARLTLGKVAHPSRHAKGSA*LCGHLA Trigger: AGCAAGATGACCGCACAGCCAGGCCGACCCTTTGGC...GTGCCTCGAAGGATGGGCTACCTTTCCGAGGGTGAGGCGGGCATGCTCAGGCCG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090180.4 |
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CDS-3UTR GCA 90 bp | GAAACTGCTGATGGCCAAGCTTCTCCCCAGCCCTTGTCACTCAGCCCCACCCCCGAGGGAAGGGCACCTTaGCCCCATAGGGTCCCCACT | + |
Preference number: 4 (lower is better) Translates to: ETADGQASPQPLSLSPTPEGRAP*PHRVPT Trigger: AGTGGGGACCCTATGGGGGCAAGGTGCCCTTCCCTC...GGGGGTGGGGCTGAGTGACAAGGGCTGGGGAGAAGCTTGGCCATCAGCAGTTTC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt. Matches the following 1 transcripts: ENSMUST00000090180.4 |
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CDS-3UTR CCA 90 bp | ATAGCAGGCCCCTTGGGACTACAAGTGGTCTGGAGGTGCCAGTTCCAGCCCGGGCCGGGCCACACCCAGTaGAGAGCCCACATACAGCGT | + |
Preference number: 4 (lower is better) Translates to: IAGPLGLQVVWRCQFQPGPGHTQ*RAHIQR Trigger: ACGCTGTATGTGGGCTCTCCACTGGGTGTGGCCCGG...CCCGGGCTGGAACTGGCACCTCCAGACCACTTGTAGTCCCAAGGGGCCTGCTAT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090180.4 |
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CDS-3UTR GCA 90 bp | AATAGCAGGCCCCTTGGGACTACAAGTGGTCTGGAGGTGCCAGTTCCAGCCCGGTCACACTGGTGCAGCTaGAGCCGGGCCACACCCAGT | + |
Preference number: 4 (lower is better) Translates to: NSRPLGTTSGLEVPVPARSHWCS*SRATPS Trigger: ACTGGGTGTGGCCCGGCTGCAGCTGCACCAGTGTGA...CCGGGCTGGAACTGGCACCTCCAGACCACTTGTAGTCCCAAGGGGCCTGCTATT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090180.4 |
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CDS-3UTR GCA 90 bp | CAGTTCCAGCCCGGGACTGAGAACTCGGAGAAAGGCAGGGGTAGGCTGAGGTGCGCCCTGCCCAGCTCTTaGCCTTCGCTTGCTTTCCCT | + |
Preference number: 4 (lower is better) Translates to: QFQPGTENSEKGRGRLRCALPSS*PSLAFP Trigger: AGGGAAAGCAAGCGAAGGGCAAGAGCTGGGCAGGGC...GCACCTCAGCCTACCCCTGCCTTTCTCCGAGTTCTCAGTCCCGGGCTGGAACTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090180.4 |
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CDS-3UTR CCA 90 bp | GAAACTGCTGATGGCCAAGCTTCTCCCCAGCCCTTGTCACTCAGCCCCACCCCCCGTCTGGGTAGTCCTTaGTGCTGCCAAAGGGTCGGC | + |
Preference number: 4 (lower is better) Translates to: ETADGQASPQPLSLSPTPRLGSP*CCQRVG Trigger: GCCGACCCTTTGGCAGCACCAAGGACTACCCAGACG...GGGGGTGGGGCTGAGTGACAAGGGCTGGGGAGAAGCTTGGCCATCAGCAGTTTC 62% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000090180.4 |
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CDS-3UTR GCA 90 bp | CGGCCTGAGCATGCCCGCCTCACCCTCGGAAAGGTAGCCCATCCTTCGAGGCACGTCCAGTTGCACAGCTaGAATCACCTCCAGGGCAAA | + |
Preference number: 4 (lower is better) Translates to: RPEHARLTLGKVAHPSRHVQLHS*NHLQGK Trigger: TTTGCCCTGGAGGTGATTGCAGCTGTGCAACTGGAC...GTGCCTCGAAGGATGGGCTACCTTTCCGAGGGTGAGGCGGGCATGCTCAGGCCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090180.4 |
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CDS-3UTR CCA 90 bp | AATAGCAGGCCCCTTGGGACTACAAGTGGTCTGGAGGTGCCAGTTCCAGCCCGGCTTCTGTCCTGGCTGTaGCAGCCACAAGACCTCCCG | + |
Preference number: 4 (lower is better) Translates to: NSRPLGTTSGLEVPVPARLLSWL*QPQDLP Trigger: CGGGAGGTCTTGTGGCTGCCACAGCCAGGACAGAAG...CCGGGCTGGAACTGGCACCTCCAGACCACTTGTAGTCCCAAGGGGCCTGCTATT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090180.4 |
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CDS-3UTR CCA 90 bp | GAAACTGCTGATGGCCAAGCTTCTCCCCAGCCCTTGTCACTCAGCCCCACCCCCCCACAGGCCAGCAGATaGGTCCGGTTATGGGGTTGT | + |
Preference number: 4 (lower is better) Translates to: ETADGQASPQPLSLSPTPPQASR*VRLWGC Trigger: ACAACCCCATAACCGGACCCATCTGCTGGCCTGTGG...GGGGGTGGGGCTGAGTGACAAGGGCTGGGGAGAAGCTTGGCCATCAGCAGTTTC 61% GC, longest homopolymer 7 nt, total homopolymer stretches 19 nt. Matches the following 1 transcripts: ENSMUST00000090180.4 |
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CDS-3UTR CCA 90 bp | ATAGCAGGCCCCTTGGGACTACAAGTGGTCTGGAGGTGCCAGTTCCAGCCCGGGTTTTGGCTCTGGCCCTaGCCCAGACACTGCACAGCA | + |
Preference number: 4 (lower is better) Translates to: IAGPLGLQVVWRCQFQPGFWLWP*PRHCTA Trigger: TGCTGTGCAGTGTCTGGGCCAGGGCCAGAGCCAAAA...CCCGGGCTGGAACTGGCACCTCCAGACCACTTGTAGTCCCAAGGGGCCTGCTAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090180.4 |
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CDS-3UTR CCA 90 bp | ATAGCAGGCCCCTTGGGACTACAAGTGGTCTGGAGGTGCCAGTTCCAGCCCGGGCAGCCTGAGGAGACTTaGGCAGGCACTCAAGGAAGG | + |
Preference number: 4 (lower is better) Translates to: IAGPLGLQVVWRCQFQPGQPEET*AGTQGR Trigger: CCTTCCTTGAGTGCCTGCCCAAGTCTCCTCAGGCTG...CCCGGGCTGGAACTGGCACCTCCAGACCACTTGTAGTCCCAAGGGGCCTGCTAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090180.4 |
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CDS-3UTR CCA 90 bp | ATAGCAGGCCCCTTGGGACTACAAGTGGTCTGGAGGTGCCAGTTCCAGCCCGGGCCTTATACCAAGTCTTaGGGGAGGCAGAGGCCAGGC | + |
Preference number: 4 (lower is better) Translates to: IAGPLGLQVVWRCQFQPGPYTKS*GRQRPG Trigger: GCCTGGCCTCTGCCTCCCCCAAGACTTGGTATAAGG...CCCGGGCTGGAACTGGCACCTCCAGACCACTTGTAGTCCCAAGGGGCCTGCTAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090180.4 |
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CDS-3UTR GCA 90 bp | AATAGCAGGCCCCTTGGGACTACAAGTGGTCTGGAGGTGCCAGTTCCAGCCCGGAGCGGGCACAGGCAGTaGCATCCCAAGCACAGTATG | + |
Preference number: 4 (lower is better) Translates to: NSRPLGTTSGLEVPVPARSGHRQ*HPKHSM Trigger: CATACTGTGCTTGGGATGGCACTGCCTGTGCCCGCT...CCGGGCTGGAACTGGCACCTCCAGACCACTTGTAGTCCCAAGGGGCCTGCTATT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090180.4 |
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CDS-3UTR GCA 90 bp | CAGTTCCAGCCCGGGACTGAGAACTCGGAGAAAGGCAGGGGTAGGCTGAGGTGCTGCTCTTCATCTTCTTaGCCAGTTCCAGCCCTGCCC | + |
Preference number: 4 (lower is better) Translates to: QFQPGTENSEKGRGRLRCCSSSS*PVPALP Trigger: GGGCAGGGCTGGAACTGGGCAAGAAGATGAAGAGCA...GCACCTCAGCCTACCCCTGCCTTTCTCCGAGTTCTCAGTCCCGGGCTGGAACTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090180.4 |
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CDS-3UTR CCA 90 bp | ACCCCACCTCCTCAGCGCCTCCACCTTCTCTCACACCTCTGTGGGGCAAGTGTTGCTTTGTTTTGGCTCTaGCCCTGGCCCAGACACTGC | + |
Preference number: 4 (lower is better) Translates to: TPPPQRLHLLSHLCGASVALFWL*PWPRHC Trigger: GCAGTGTCTGGGCCAGGGCCAGAGCCAAAACAAAGC...AACACTTGCCCCACAGAGGTGTGAGAGAAGGTGGAGGCGCTGAGGAGGTGGGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000090180.4 |
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CDS-3UTR TCA 90 bp | ACCCCACCTCCTCAGCGCCTCCACCTTCTCTCACACCTCTGTGGGGCAAGTGTTGGGCAAAGGGCCCATTaGAGACCTCCCAGATGTCTA | + |
Preference number: 4 (lower is better) Translates to: TPPPQRLHLLSHLCGASVGQRAH*RPPRCL Trigger: TAGACATCTGGGAGGTCTTCAATGGGCCCTTTGCCC...AACACTTGCCCCACAGAGGTGTGAGAGAAGGTGGAGGCGCTGAGGAGGTGGGGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090180.4 |
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CDS-3UTR TCA 90 bp | ATAGCAGGCCCCTTGGGACTACAAGTGGTCTGGAGGTGCCAGTTCCAGCCCGGGCAGTCCCTAGGAAGATaGCATCATAGGTCCCATCCT | + |
Preference number: 4 (lower is better) Translates to: IAGPLGLQVVWRCQFQPGQSLGR*HHRSHP Trigger: AGGATGGGACCTATGATGTCATCTTCCTAGGGACTG...CCCGGGCTGGAACTGGCACCTCCAGACCACTTGTAGTCCCAAGGGGCCTGCTAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090180.4 |
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CDS-3UTR TCA 90 bp | TGGGTTTGGGCAGGTAGAGTTCAGGGCTTCTGTCCTCCAGATAAGCAAATGGTGCAGCGCACTGCAGCCTaGGGAGACTTGGGCAGGCAC | + |
Preference number: 4 (lower is better) Translates to: WVWAGRVQGFCPPDKQMVQRTAA*GDLGRH Trigger: GTGCCTGCCCAAGTCTCCTCAGGCTGCAGTGCGCTG...CACCATTTGCTTATCTGGAGGACAGAAGCCCTGAACTCTACCTGCCCAAACCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090180.4 |
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CDS-3UTR GCA 90 bp | AAGCAAATGGTGCAAGTTCAGATCTCAGCACCCTGGGGGTGCCAGGGTAGAGGAGACCAGGGCTGGGGATaGCCACATGGAACAGAAGGC | + |
Preference number: 4 (lower is better) Translates to: KQMVQVQISAPWGCQGRGDQGWG*PHGTEG Trigger: GCCTTCTGTTCCATGTGGGCATCCCCAGCCCTGGTC...TCCTCTACCCTGGCACCCCCAGGGTGCTGAGATCTGAACTTGCACCATTTGCTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000090180.4 |
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CDS-3UTR GCA 90 bp | GAGACAGATAAACAGCACAACCCCACCTCCTCAGCGCCTCCACCTTCTCTCACACTGGGTAGTCCTTGGTaGTGCCAAAGGGTCGGCCTG | + |
Preference number: 4 (lower is better) Translates to: ETDKQHNPTSSAPPPSLTLGSPW*CQRVGL Trigger: CAGGCCGACCCTTTGGCAGCACCAAGGACTACCCAG...TGTGAGAGAAGGTGGAGGCGCTGAGGAGGTGGGGTTGTGCTGTTTATCTGTCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090180.4 |
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CDS-3UTR CCA 90 bp | CACCCTGGGGGTGCCAGGGTAGAGGAAATAAACCCAAAGTCTTCGGGTTTGAAGGGCTGGGACCAGGGCTaGGGATGCCCACATGGAACA | + |
Preference number: 4 (lower is better) Translates to: HPGGARVEEINPKSSGLKGWDQG*GCPHGT Trigger: TGTTCCATGTGGGCATCCCCAGCCCTGGTCCCAGCC...CTTCAAACCCGAAGACTTTGGGTTTATTTCCTCTACCCTGGCACCCCCAGGGTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000090180.4 |
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3UTR CAA 72 bp | GCCATTGTTCAGCAAGCTGGGAAAGAACCACCCGCCTaGCCTCTGGGCACAACCGGAAATGTGCTCCGGAAG | + |
Preference number: 4 (lower is better) Translates to: AIVQQAGKEPPA*PLGTTGNVLRK Trigger: CTTCCGGAGCACATTTCCGGTTGTGCCCAGAGGCAAGGCGGGTGGTTCTTTCCCAGCTTGCTGAACAATGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090180.4 |
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CDS-3UTR TCA 90 bp | AATAGCAGGCCCCTTGGGACTACAAGTGGTCTGGAGGTGCCAGTTCCAGCCCGGACTCATCCAGGTACATaGCTTGGAGGTCTAGGGAAC | + |
Preference number: 4 (lower is better) Translates to: NSRPLGTTSGLEVPVPARTHPGT*LGGLGN Trigger: GTTCCCTAGACCTCCAAGTCATGTACCTGGATGAGT...CCGGGCTGGAACTGGCACCTCCAGACCACTTGTAGTCCCAAGGGGCCTGCTATT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090180.4 |
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CDS-3UTR TCA 90 bp | CAAACAGAAGGAAGCTGGGTTTGGGCAGGTAGAGTTCAGGGCTTCTGTCCTCCACGGCTGATGGTGACATaGCCTGGGCCACCATCTGGT | + |
Preference number: 4 (lower is better) Translates to: QTEGSWVWAGRVQGFCPPRLMVT*PGPPSG Trigger: ACCAGATGGTGGCCCAGGTCATGTCACCATCAGCCG...TGGAGGACAGAAGCCCTGAACTCTACCTGCCCAAACCCAGCTTCCTTCTGTTTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090180.4 |
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CDS-3UTR GCA 90 bp | CACCCTGGGGGTGCCAGGGTAGAGGAAATAAACCCAAAGTCTTCGGGTTTGAAGGTTGGAAGGCTCCTGTaGCACAGGCCAGCAGATGGG | + |
Preference number: 4 (lower is better) Translates to: HPGGARVEEINPKSSGLKVGRLL*HRPADG Trigger: CCCATCTGCTGGCCTGTGGCACAGGAGCCTTCCAAC...CTTCAAACCCGAAGACTTTGGGTTTATTTCCTCTACCCTGGCACCCCCAGGGTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000090180.4 |
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CDS-3UTR TCA 90 bp | ATGGTGCAAGTTCAGATCTCAGCACCCTGGGGGTGCCAGGGTAGAGGAAATAAATCTAGCTGGTCAAAGTaGGTCTCAGCCCCACCCGGG | + |
Preference number: 4 (lower is better) Translates to: MVQVQISAPWGCQGRGNKSSWSK*VSAPPG Trigger: CCCGGGTGGGGCTGAGACTCACTTTGACCAGCTAGA...TTTATTTCCTCTACCCTGGCACCCCCAGGGTGCTGAGATCTGAACTTGCACCAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000090180.4 |
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CDS-3UTR GCA 90 bp | TGGGTTTGGGCAGGTAGAGTTCAGGGCTTCTGTCCTCCAGATAAGCAAATGGTGGGGTCGGCCTGGCTGTaGGGTCATCTTGCTAGGACA | + |
Preference number: 4 (lower is better) Translates to: WVWAGRVQGFCPPDKQMVGSAWL*GHLART Trigger: TGTCCTAGCAAGATGACCGCACAGCCAGGCCGACCC...CACCATTTGCTTATCTGGAGGACAGAAGCCCTGAACTCTACCTGCCCAAACCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090180.4 |
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CDS-3UTR GCA 90 bp | TCTAGATTCCAAAGCATGGAGACAGATAAACAGCACAACCCCACCTCCTCAGCGCCCTGGCCCAGACACTaGACAGCAGGGTTGCCATGG | + |
Preference number: 4 (lower is better) Translates to: SRFQSMETDKQHNPTSSAPWPRH*TAGLPW Trigger: CCATGGCAACCCTGCTGTGCAGTGTCTGGGCCAGGG...CGCTGAGGAGGTGGGGTTGTGCTGTTTATCTGTCTCCATGCTTTGGAATCTAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090180.4 |
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CDS-3UTR GCA 90 bp | GAGACAGATAAACAGCACAACCCCACCTCCTCAGCGCCTCCACCTTCTCTCACAGCTCAGCCAGCACCCTaGTCTTCATCTTCTTGCCCA | + |
Preference number: 4 (lower is better) Translates to: ETDKQHNPTSSAPPPSLTAQPAP*SSSSCP Trigger: TGGGCAAGAAGATGAAGAGCAGGGTGCTGGCTGAGC...TGTGAGAGAAGGTGGAGGCGCTGAGGAGGTGGGGTTGTGCTGTTTATCTGTCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090180.4 |
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CDS-3UTR CCA 90 bp | CAAACAGAAGGAAGCTGGGTTTGGGCAGGTAGAGTTCAGGGCTTCTGTCCTCCACTGCAACACCTCGTCTaGGTAGTCCTTGGTGCTGCC | + |
Preference number: 4 (lower is better) Translates to: QTEGSWVWAGRVQGFCPPLQHLV*VVLGAA Trigger: GGCAGCACCAAGGACTACCCAGACGAGGTGTTGCAG...TGGAGGACAGAAGCCCTGAACTCTACCTGCCCAAACCCAGCTTCCTTCTGTTTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090180.4 |
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3UTR CAA 72 bp | CCATACACCCACTCAGAGGGTCACTCAGAATGGCCATaGTTCAGCAAGCTGGGAAAGAACCACCCGCCTTGC | + |
Preference number: 4 (lower is better) Translates to: PYTHSEGHSEWP*FSKLGKNHPPC Trigger: GCAAGGCGGGTGGTTCTTTCCCAGCTTGCTGAACAATGGCCATTCTGAGTGACCCTCTGAGTGGGTGTATGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090180.4 |
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CDS-3UTR TCA 90 bp | CACCCTGGGGGTGCCAGGGTAGAGGAAATAAACCCAAAGTCTTCGGGTTTGAAGACACCAGCCGGGCCTTaGGGAAAGTGCTCCATTTGT | + |
Preference number: 4 (lower is better) Translates to: HPGGARVEEINPKSSGLKTPAGP*GKCSIC Trigger: ACAAATGGAGCACTTTCCTCAAGGCCCGGCTGGTGT...CTTCAAACCCGAAGACTTTGGGTTTATTTCCTCTACCCTGGCACCCCCAGGGTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000090180.4 |
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CDS-3UTR TCA 90 bp | TCTAGATTCCAAAGCATGGAGACAGATAAACAGCACAACCCCACCTCCTCAGCGGAGCCAAGTGAGTTTTaGCCAGGACAGGGCGGCCAC | + |
Preference number: 4 (lower is better) Translates to: SRFQSMETDKQHNPTSSAEPSEF*PGQGGH Trigger: GTGGCCGCCCTGTCCTGGTCAAAACTCACTTGGCTC...CGCTGAGGAGGTGGGGTTGTGCTGTTTATCTGTCTCCATGCTTTGGAATCTAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090180.4 |
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CDS-3UTR GCA 90 bp | TGGGGGTGCCAGGGTAGAGGAAATAAACCCAAAGTCTTCGGGTTTGAAGTTCAGCCGGGGGTCTGGCCATaGCTGATCCAGTCTCAGAGA | + |
Preference number: 4 (lower is better) Translates to: WGCQGRGNKPKVFGFEVQPGVWP*LIQSQR Trigger: TCTCTGAGACTGGATCAGGCATGGCCAGACCCCCGG...CTGAACTTCAAACCCGAAGACTTTGGGTTTATTTCCTCTACCCTGGCACCCCCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000090180.4 |
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CDS-3UTR CCA 90 bp | CAAACAGAAGGAAGCTGGGTTTGGGCAGGTAGAGTTCAGGGCTTCTGTCCTCCAAGACCCGCACGAAGTTaGCACACTCCGTCAAAGGGT | + |
Preference number: 4 (lower is better) Translates to: QTEGSWVWAGRVQGFCPPRPARS*HTPSKG Trigger: ACCCTTTGACGGAGTGTGCCAACTTCGTGCGGGTCT...TGGAGGACAGAAGCCCTGAACTCTACCTGCCCAAACCCAGCTTCCTTCTGTTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090180.4 |
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CDS-3UTR CCA 90 bp | TCTAGATTCCAAAGCATGGAGACAGATAAACAGCACAACCCCACCTCCTCAGCGACAGCAGGGTTGCCATaGCGTATGTCCTGCCGACGG | + |
Preference number: 4 (lower is better) Translates to: SRFQSMETDKQHNPTSSATAGLP*RMSCRR Trigger: CCGTCGGCAGGACATACGCCATGGCAACCCTGCTGT...CGCTGAGGAGGTGGGGTTGTGCTGTTTATCTGTCTCCATGCTTTGGAATCTAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090180.4 |
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CDS-3UTR GCA 90 bp | CAAACAGAAGGAAGCTGGGTTTGGGCAGGTAGAGTTCAGGGCTTCTGTCCTCCAGGCACTCAAGGAAGGTaGTGTTGTGCTCTGTGCCAA | + |
Preference number: 4 (lower is better) Translates to: QTEGSWVWAGRVQGFCPPGTQGR*CCALCQ Trigger: TTGGCACAGAGCACAACAGCACCTTCCTTGAGTGCC...TGGAGGACAGAAGCCCTGAACTCTACCTGCCCAAACCCAGCTTCCTTCTGTTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090180.4 |
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CDS-3UTR CCA 90 bp | ATGGTGCAAGTTCAGATCTCAGCACCCTGGGGGTGCCAGGGTAGAGGAAATAAAAAGGTGCAGATGGGTTaGAAGGCTCCTGTGCCACAG | + |
Preference number: 4 (lower is better) Translates to: MVQVQISAPWGCQGRGNKKVQMG*KAPVPQ Trigger: CTGTGGCACAGGAGCCTTCCAACCCATCTGCACCTT...TTTATTTCCTCTACCCTGGCACCCCCAGGGTGCTGAGATCTGAACTTGCACCAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000090180.4 |
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CDS-3UTR CCA 90 bp | ACCCCCAGAACAGCAGGATTTACCATACCAGCTTTCTGTTCTCCCATAGAGAGAGGCTCTTCCCGGCCTTaGGCCACAGCAGGAACACAT | + |
Preference number: 4 (lower is better) Translates to: TPRTAGFTIPAFCSPIERGSSRP*ATAGTH Trigger: ATGTGTTCCTGCTGTGGCCCAAGGCCGGGAAGAGCC...TCTCTCTATGGGAGAACAGAAAGCTGGTATGGTAAATCCTGCTGTTCTGGGGGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000090180.4 |
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CDS-3UTR CCA 90 bp | GAAGGAAGCTGGGTTTGGGCAGGTAGAGTTCAGGGCTTCTGTCCTCCAGATAAGCAGACAGCAAAGCCCTaGAACACAGCACTGACAGTG | + |
Preference number: 4 (lower is better) Translates to: EGSWVWAGRVQGFCPPDKQTAKP*NTALTV Trigger: CACTGTCAGTGCTGTGTTCCAGGGCTTTGCTGTCTG...CTTATCTGGAGGACAGAAGCCCTGAACTCTACCTGCCCAAACCCAGCTTCCTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090180.4 |
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CDS-3UTR CCA 90 bp | GAAGGAAGCTGGGTTTGGGCAGGTAGAGTTCAGGGCTTCTGTCCTCCAGATAAGGGCACCTTAAACACCTaGAGCTCCTCCAAAACCACC | + |
Preference number: 4 (lower is better) Translates to: EGSWVWAGRVQGFCPPDKGTLNT*SSSKTT Trigger: GGTGGTTTTGGAGGAGCTCCAGGTGTTTAAGGTGCC...CTTATCTGGAGGACAGAAGCCCTGAACTCTACCTGCCCAAACCCAGCTTCCTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090180.4 |
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CDS-3UTR CCA 90 bp | ATGGTGCAAGTTCAGATCTCAGCACCCTGGGGGTGCCAGGGTAGAGGAAATAAAGAAGCTGCTTTGTTTTaGCTCTGGCCCTGGCCCAGA | + |
Preference number: 4 (lower is better) Translates to: MVQVQISAPWGCQGRGNKEAALF*LWPWPR Trigger: TCTGGGCCAGGGCCAGAGCCAAAACAAAGCAGCTTC...TTTATTTCCTCTACCCTGGCACCCCCAGGGTGCTGAGATCTGAACTTGCACCAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000090180.4 |
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CDS-3UTR CCA 90 bp | CACCCTGGGGGTGCCAGGGTAGAGGAAATAAACCCAAAGTCTTCGGGTTTGAAGAAACGGACCACGGTCTaGGAGAAGCCATGTTCCAGA | + |
Preference number: 4 (lower is better) Translates to: HPGGARVEEINPKSSGLKKRTTV*EKPCSR Trigger: TCTGGAACATGGCTTCTCCCAGACCGTGGTCCGTTT...CTTCAAACCCGAAGACTTTGGGTTTATTTCCTCTACCCTGGCACCCCCAGGGTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000090180.4 |
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CDS-3UTR TCA 90 bp | AGATTTCCTCTAAGAGGTAATCAATCAGGAGTTCTGGACTCCTCTTTCCTAGCTCTGCGTCATGGCGGCTaGGCCTTCGGAACAGCAGCC | + |
Preference number: 4 (lower is better) Translates to: RFPLRGNQSGVLDSSFLALRHGG*AFGTAA Trigger: GGCTGCTGTTCCGAAGGCTCAGCCGCCATGACGCAG...AGCTAGGAAAGAGGAGTCCAGAACTCCTGATTGATTACCTCTTAGAGGAAATCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090180.4 |
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CDS-3UTR CCA 90 bp | TCTGTGGGGCAAGTGTTTCTTATCAGGTTCTACCTTAGGAATCTACTTTCCCCTGACCTCCCGGGGGTCTaGCCATGCCTGATCCAGTCT | + |
Preference number: 4 (lower is better) Translates to: SVGQVFLIRFYLRNLLSPDLPGV*PCLIQS Trigger: AGACTGGATCAGGCATGGCCAGACCCCCGGGAGGTC...AGGGGAAAGTAGATTCCTAAGGTAGAACCTGATAAGAAACACTTGCCCCACAGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000090180.4 |
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CDS-3UTR TCA 90 bp | ACCCCCAGAACAGCAGGATTTACCATACCAGCTTTCTGTTCTCCCATAGAGAGAGGTTGGCGAAGCCCGTaGGCTGAAGGATGTCCTTAT | + |
Preference number: 4 (lower is better) Translates to: TPRTAGFTIPAFCSPIERGWRSP*AEGCPY Trigger: ATAAGGACATCCTTCAGCTCACGGGCTTCGCCAACC...TCTCTCTATGGGAGAACAGAAAGCTGGTATGGTAAATCCTGCTGTTCTGGGGGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000090180.4 |
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CDS-3UTR GCA 90 bp | TCTGTGGGGCAAGTGTTTCTTATCAGGTTCTACCTTAGGAATCTACTTTCCCCTGGTAGTCCTTGGTGCTaGCAAAGGGTCGGCCTGGCT | + |
Preference number: 4 (lower is better) Translates to: SVGQVFLIRFYLRNLLSPGSPWC*QRVGLA Trigger: AGCCAGGCCGACCCTTTGGCAGCACCAAGGACTACC...AGGGGAAAGTAGATTCCTAAGGTAGAACCTGATAAGAAACACTTGCCCCACAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090180.4 |
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CDS-3UTR CCA 90 bp | ACCCCCAGAACAGCAGGATTTACCATACCAGCTTTCTGTTCTCCCATAGAGAGACCGGTCAGAGTTATCTaGGATCCGAGCAGCCATCAC | + |
Preference number: 4 (lower is better) Translates to: TPRTAGFTIPAFCSPIERPVRVI*DPSSHH Trigger: GTGATGGCTGCTCGGATCCCAGATAACTCTGACCGG...TCTCTCTATGGGAGAACAGAAAGCTGGTATGGTAAATCCTGCTGTTCTGGGGGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000090180.4 |
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CDS-3UTR CCA 90 bp | TGGGTTTGGGCAGGTAGAGTTCAGGGCTTCTGTCCTCCAGATAAGCAAATGGTGTCATCTGTCTTCACCTaGTCAGTCCCCTTATCCCCT | + |
Preference number: 4 (lower is better) Translates to: WVWAGRVQGFCPPDKQMVSSVFT*SVPLSP Trigger: AGGGGATAAGGGGACTGACCAGGTGAAGACAGATGA...CACCATTTGCTTATCTGGAGGACAGAAGCCCTGAACTCTACCTGCCCAAACCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090180.4 |
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3UTR CAA 72 bp | TTCCCTATTCAAAGGAGGGAACTCAGACATGCCCTCTaGTCTGTCCCGTGCGTCACTAACTTCTTCACCCTC | + |
Preference number: 4 (lower is better) Translates to: FPIQRRELRHAL*SVPCVTNFFTL Trigger: GAGGGTGAAGAAGTTAGTGACGCACGGGACAGACAAGAGGGCATGTCTGAGTTCCCTCCTTTGAATAGGGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090180.4 |
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CDS-3UTR GCA 90 bp | AAGTTCAGATCTCAGCACCCTGGGGGTGCCAGGGTAGAGGAAATAAACCCAAAGAAGGGTCTTTTCCCTTaGGGACACATTCCACCTTCT | + |
Preference number: 4 (lower is better) Translates to: KFRSQHPGGARVEEINPKKGLFP*GHIPPS Trigger: AGAAGGTGGAATGTGTCCGCAAGGGAAAAGACCCTT...CTTTGGGTTTATTTCCTCTACCCTGGCACCCCCAGGGTGCTGAGATCTGAACTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000090180.4 |
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CDS-3UTR GCA 90 bp | ACCCCCAGAACAGCAGGATTTACCATACCAGCTTTCTGTTCTCCCATAGAGAGAACTCAGCACAGGCACTaGCGTAAGTCTCACACTGGT | + |
Preference number: 4 (lower is better) Translates to: TPRTAGFTIPAFCSPIERTQHRH*RKSHTG Trigger: ACCAGTGTGAGACTTACGGCAGTGCCTGTGCTGAGT...TCTCTCTATGGGAGAACAGAAAGCTGGTATGGTAAATCCTGCTGTTCTGGGGGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000090180.4 |
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CDS-3UTR GCA 90 bp | TCTAGATTCCAAAGCATGGAGACAGATAAACAGCACAACCCCACCTCCTCAGCGAGGAAGGTGCTGTTGTaGTCTGTGCCAAAGACTCTG | + |
Preference number: 4 (lower is better) Translates to: SRFQSMETDKQHNPTSSARKVLL*SVPKTL Trigger: CAGAGTCTTTGGCACAGAGCACAACAGCACCTTCCT...CGCTGAGGAGGTGGGGTTGTGCTGTTTATCTGTCTCCATGCTTTGGAATCTAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090180.4 |
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CDS-3UTR GCA 90 bp | TCTGTGGGGCAAGTGTTTCTTATCAGGTTCTACCTTAGGAATCTACTTTCCCCTCATGAGCCCCGAAGCTaGTTTGTTTTGGCTCTGGCC | + |
Preference number: 4 (lower is better) Translates to: SVGQVFLIRFYLRNLLSPHEPRS*FVLALA Trigger: GGCCAGAGCCAAAACAAAGCAGCTTCGGGGCTCATG...AGGGGAAAGTAGATTCCTAAGGTAGAACCTGATAAGAAACACTTGCCCCACAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000090180.4 |
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CDS-3UTR TCA 90 bp | TCTGTGGGGCAAGTGTTTCTTATCAGGTTCTACCTTAGGAATCTACTTTCCCCTGCGAAGCCCGTGAGCTaGAGGATGTCCTTATACCAA | + |
Preference number: 4 (lower is better) Translates to: SVGQVFLIRFYLRNLLSPAKPVS*RMSLYQ Trigger: TTGGTATAAGGACATCCTTCAGCTCACGGGCTTCGC...AGGGGAAAGTAGATTCCTAAGGTAGAACCTGATAAGAAACACTTGCCCCACAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090180.4 |
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CDS-3UTR GCA 90 bp | GCTCTGCTTTTTCTCATCAGAACTCAAGGCAACATGACAATAAAAATATCAACAGACGGAACCTGCGCTTaGCAGAGCTGGGGCGGTAGC | + |
Preference number: 4 (lower is better) Translates to: ALLFLIRTQGNMTIKISTDGTCA*QSWGGS Trigger: GCTACCGCCCCAGCTCTGGCAAGCGCAGGTTCCGTC...TGTTGATATTTTTATTGTCATGTTGCCTTGAGTTCTGATGAGAAAAAGCAGAGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000090180.4 |
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CDS-3UTR CCA 90 bp | AGATTTCCTCTAAGAGGTAATCAATCAGGAGTTCTGGACTCCTCTTTCCTAGCTTTCCACCTTCTGTCCTaGCTGTGGCAGCCACAAGAC | + |
Preference number: 4 (lower is better) Translates to: RFPLRGNQSGVLDSSFLAFHLLS*LWQPQD Trigger: GTCTTGTGGCTGCCACAGCCAGGACAGAAGGTGGAA...AGCTAGGAAAGAGGAGTCCAGAACTCCTGATTGATTACCTCTTAGAGGAAATCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090180.4 |
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3UTR CAA 72 bp | AGTATGCTTGGAAGACGGAGAAGCCACAAGGCCCATTaGAAAACAGACACAGTTCACACATGTGGGCGTTTT | + |
Preference number: 4 (lower is better) Translates to: SMLGRRRSHKAH*KTDTVHTCGRF Trigger: AAAACGCCCACATGTGTGAACTGTGTCTGTTTTCAAATGGGCCTTGTGGCTTCTCCGTCTTCCAAGCATACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090180.4 |
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CDS-3UTR CCA 90 bp | GCTCTGCTTTTTCTCATCAGAACTCAAGGCAACATGACAATAAAAATATCAACACGAGGCCTCACAGGCTaGAACATGAGTGGGTGGTCT | + |
Preference number: 4 (lower is better) Translates to: ALLFLIRTQGNMTIKISTRGLTG*NMSGWS Trigger: AGACCACCCACTCATGTTCCAGCCTGTGAGGCCTCG...TGTTGATATTTTTATTGTCATGTTGCCTTGAGTTCTGATGAGAAAAAGCAGAGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000090180.4 |
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CDS-3UTR CCA 90 bp | GCTCTGCTTTTTCTCATCAGAACTCAAGGCAACATGACAATAAAAATATCAACAAGGCTGGAACATGAGTaGGTGGTCTCGGACAAACTG | + |
Preference number: 4 (lower is better) Translates to: ALLFLIRTQGNMTIKISTRLEHE*VVSDKL Trigger: CAGTTTGTCCGAGACCACCCACTCATGTTCCAGCCT...TGTTGATATTTTTATTGTCATGTTGCCTTGAGTTCTGATGAGAAAAAGCAGAGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000090180.4 |
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3UTR CAA 72 bp | GCCAGGGTAGAGGAAATAAACCCAAAGTCTTCGGGTTaGAAGTTCAGTACAGCAAAAGCTCTTTCTTGTTTT | + |
Preference number: 4 (lower is better) Translates to: ARVEEINPKSSG*KFSTAKALSCF Trigger: AAAACAAGAAAGAGCTTTTGCTGTACTGAACTTCAAACCCGAAGACTTTGGGTTTATTTCCTCTACCCTGGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090180.4 |
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CDS GCA 90 bp | CAGCAGGGTTGCCATGGCGTATGTCCTGCCGACGGAACCTGCGCTTaGCAGAGCTGGGGCGGTAGCGGGCACAGGCAGTGCCATCCCAAG | + |
Preference number: 5 (lower is better) Translates to: QQGCHGVCPADGTCA*QSWGGSGHRQCHPK Trigger: CTTGGGATGGCACTGCCTGTGCCCGCTACCGCCCCAGCTCTGGCAAGCGCAGGTTCCGTCGGCAGGACATACGCCATGGCAACCCTGCTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090180.4 |
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CDS GCA 90 bp | ACTGCACAGCAGGGTTGCCATGGCGTATGTCCTGCCGACGGAACCTaGGCTTGCCAGAGCTGGGGCGGTAGCGGGCACAGGCAGTGCCAT | + |
Preference number: 5 (lower is better) Translates to: TAQQGCHGVCPADGT*ACQSWGGSGHRQCH Trigger: ATGGCACTGCCTGTGCCCGCTACCGCCCCAGCTCTGGCAAGCGCAGGTTCCGTCGGCAGGACATACGCCATGGCAACCCTGCTGTGCAGT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090180.4 |
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CDS GCA 90 bp | CTCGTCTGGGTAGTCCTTGGTGCTGCCAAAGGGTCGGCCTGGCTGTaGGGTCATCTTGCTAGGACACACACCGGGGCGAGGGAAGGGCAC | + |
Preference number: 5 (lower is better) Translates to: LVWVVLGAAKGSAWL*GHLARTHTGAREGH Trigger: GTGCCCTTCCCTCGCCCCGGTGTGTGTCCTAGCAAGATGACCGCACAGCCAGGCCGACCCTTTGGCAGCACCAAGGACTACCCAGACGAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090180.4 |
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CDS GCA 90 bp | ATCTTCTTGCCCAGTTCCAGCCCTGCCCAGCTCTTGCCCTTCGCTTaGTTTCCCTTTCCGCGGAAGGAGCCTGAGCGCTCCCCGACACCC | + |
Preference number: 5 (lower is better) Translates to: IFLPSSSPAQLLPFA*FPFPRKEPERSPTP Trigger: GGGTGTCGGGGAGCGCTCAGGCTCCTTCCGCGGAAAGGGAAAGCAAGCGAAGGGCAAGAGCTGGGCAGGGCTGGAACTGGGCAAGAAGAT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090180.4 |
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CDS CCA 90 bp | CTCCCCACCTACAAAGGTGCTGGCGAAGGGTCGGCTGGGCTCATGTaGGCAACGCCCCCTTCCATTCTCGACGCTGCTAGCATCCAAGCG | + |
Preference number: 5 (lower is better) Translates to: LPTYKGAGEGSAGLM*ATPPSILDAASIQA Trigger: CGCTTGGATGCTAGCAGCGTCGAGAATGGAAGGGGGCGTTGCCCACATGAGCCCAGCCGACCCTTCGCCAGCACCTTTGTAGGTGGGGAG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000090180.4 |
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CDS-3UTR CAA 90 bp | CAGTTCCAGCCCGGGACTGAGAACTCGGAGAAAGGCAGGGGTAGGCTGAGGTGCAGCCCTGCCCAGCTCTaGCCCTTCGCTTGCTTTCCC | + |
Preference number: 5 (lower is better) Translates to: QFQPGTENSEKGRGRLRCSPAQL*PFACFP Trigger: GGGAAAGCAAGCGAAGGGCAAGAGCTGGGCAGGGCT...GCACCTCAGCCTACCCCTGCCTTTCTCCGAGTTCTCAGTCCCGGGCTGGAACTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090180.4 |
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CDS TCA 90 bp | CTCGATCCACCACAATCTGGCGCAGTCGCTGAGCCAAGTGAGTTTTaGCCAGGACAGGGCGGCCACGCCGAGGCCTCACAGGCTGGAACA | + |
Preference number: 5 (lower is better) Translates to: LDPPQSGAVAEPSEF*PGQGGHAEASQAGT Trigger: TGTTCCAGCCTGTGAGGCCTCGGCGTGGCCGCCCTGTCCTGGTCAAAACTCACTTGGCTCAGCGACTGCGCCAGATTGTGGTGGATCGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090180.4 |
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CDS GCA 90 bp | CTGTCCTGGCTGTGGCAGCCACAAGACCTCCCGGGGGTCTGGCCATaGCTGATCCAGTCTCAGAGAGTAAAGGGCATCTCGGCTTCCCAG | + |
Preference number: 5 (lower is better) Translates to: LSWLWQPQDLPGVWP*LIQSQRVKGISASQ Trigger: CTGGGAAGCCGAGATGCCCTTTACTCTCTGAGACTGGATCAGGCATGGCCAGACCCCCGGGAGGTCTTGTGGCTGCCACAGCCAGGACAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000090180.4 |
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CDS GCA 90 bp | AGCCCCGAAGCTGCTTTGTTTTGGCTCTGGCCCTGGCCCAGACACTaGACAGCAGGGTTGCCATGGCGTATGTCCTGCCGACGGAACCTG | + |
Preference number: 5 (lower is better) Translates to: SPEAALFWLWPWPRH*TAGLPWRMSCRRNL Trigger: CAGGTTCCGTCGGCAGGACATACGCCATGGCAACCCTGCTGTGCAGTGTCTGGGCCAGGGCCAGAGCCAAAACAAAGCAGCTTCGGGGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090180.4 |
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CDS CCA 90 bp | CAACACCTCGTCTGGGTAGTCCTTGGTGCTGCCAAAGGGTCGGCCTaGCTGTGCGGTCATCTTGCTAGGACACACACCGGGGCGAGGGAA | + |
Preference number: 5 (lower is better) Translates to: QHLVWVVLGAAKGSA*LCGHLARTHTGARE Trigger: TTCCCTCGCCCCGGTGTGTGTCCTAGCAAGATGACCGCACAGCCAGGCCGACCCTTTGGCAGCACCAAGGACTACCCAGACGAGGTGTTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090180.4 |
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CDS CCA 90 bp | CAGGACAGGGCGGCCACGCCGAGGCCTCACAGGCTGGAACATGAGTaGGTGGTCTCGGACAAACTGCAACACCTCGTCTGGGTAGTCCTT | + |
Preference number: 5 (lower is better) Translates to: QDRAATPRPHRLEHE*VVSDKLQHLVWVVL Trigger: AAGGACTACCCAGACGAGGTGTTGCAGTTTGTCCGAGACCACCCACTCATGTTCCAGCCTGTGAGGCCTCGGCGTGGCCGCCCTGTCCTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090180.4 |
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CDS TCA 90 bp | CCAGCTCTTGCCCTTCGCTTGCTTTCCCTTTCCGCGGAAGGAGCCTaGGCGCTCCCCGACACCCCTGCACCATACACGTTCACAGTACTC | + |
Preference number: 5 (lower is better) Translates to: PALALRLLSLSAEGA*ALPDTPAPYTFTVL Trigger: GAGTACTGTGAACGTGTATGGTGCAGGGGTGTCGGGGAGCGCTCAGGCTCCTTCCGCGGAAAGGGAAAGCAAGCGAAGGGCAAGAGCTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090180.4 |
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CDS GCA 90 bp | TGGCTTCTACCTCCCGGGGTGTCCGATTGTGCTCAGCCAGCACCCTaGTCTTCATCTTCTTGCCCAGTTCCAGCCCTGCCCAGCTCTTGC | + |
Preference number: 5 (lower is better) Translates to: WLLPPGVSDCAQPAP*SSSSCPVPALPSSC Trigger: GCAAGAGCTGGGCAGGGCTGGAACTGGGCAAGAAGATGAAGAGCAGGGTGCTGGCTGAGCACAATCGGACACCCCGGGAGGTAGAAGCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090180.4 |
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CDS CCA 90 bp | CACCTTCTGTCCTGGCTGTGGCAGCCACAAGACCTCCCGGGGGTCTaGCCATGCCTGATCCAGTCTCAGAGAGTAAAGGGCATCTCGGCT | + |
Preference number: 5 (lower is better) Translates to: HLLSWLWQPQDLPGV*PCLIQSQRVKGISA Trigger: AGCCGAGATGCCCTTTACTCTCTGAGACTGGATCAGGCATGGCCAGACCCCCGGGAGGTCTTGTGGCTGCCACAGCCAGGACAGAAGGTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000090180.4 |
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CDS-3UTR CAA 90 bp | ATAGCAGGCCCCTTGGGACTACAAGTGGTCTGGAGGTGCCAGTTCCAGCCCGGGAAGACCCGCACGAAGTaGGCACACTCCGTCAAAGGG | + |
Preference number: 5 (lower is better) Translates to: IAGPLGLQVVWRCQFQPGKTRTK*AHSVKG Trigger: CCCTTTGACGGAGTGTGCCAACTTCGTGCGGGTCTT...CCCGGGCTGGAACTGGCACCTCCAGACCACTTGTAGTCCCAAGGGGCCTGCTAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090180.4 |
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CDS-3UTR CAA 90 bp | GAAACTGCTGATGGCCAAGCTTCTCCCCAGCCCTTGTCACTCAGCCCCACCCCCGAAGGTGCAGATGGGTaGGAAGGCTCCTGTGCCACA | + |
Preference number: 5 (lower is better) Translates to: ETADGQASPQPLSLSPTPEGADG*EGSCAT Trigger: TGTGGCACAGGAGCCTTCCAACCCATCTGCACCTTC...GGGGGTGGGGCTGAGTGACAAGGGCTGGGGAGAAGCTTGGCCATCAGCAGTTTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000090180.4 |
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CDS TCA 90 bp | CCAGCATCATTCACACAGACGCGGCCCACTCGGCTGATGGTGACATaGCCTGGGCCACCATCTGGTGACGGGACAGTCTCGGAGAAGAAG | + |
Preference number: 5 (lower is better) Translates to: PASFTQTRPTRLMVT*PGPPSGDGTVSEKK Trigger: CTTCTTCTCCGAGACTGTCCCGTCACCAGATGGTGGCCCAGGTCATGTCACCATCAGCCGAGTGGGCCGCGTCTGTGTGAATGATGCTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090180.4 |
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CDS GCA 90 bp | CTCAGCCAGCACCCTGCTCTTCATCTTCTTGCCCAGTTCCAGCCCTaGCCAGCTCTTGCCCTTCGCTTGCTTTCCCTTTCCGCGGAAGGA | + |
Preference number: 5 (lower is better) Translates to: LSQHPALHLLAQFQP*PALALRLLSLSAEG Trigger: TCCTTCCGCGGAAAGGGAAAGCAAGCGAAGGGCAAGAGCTGGGCAGGGCTGGAACTGGGCAAGAAGATGAAGAGCAGGGTGCTGGCTGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090180.4 |
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CDS-3UTR CAA 90 bp | CGGCCTGAGCATGCCCGCCTCACCCTCGGAAAGGTAGCCCATCCTTCGAGGCACGCCCACATACAGCGTTaGCCTTTTGACAGAGATCTC | + |
Preference number: 5 (lower is better) Translates to: RPEHARLTLGKVAHPSRHAHIQR*PFDRDL Trigger: GAGATCTCTGTCAAAAGGCAAACGCTGTATGTGGGC...GTGCCTCGAAGGATGGGCTACCTTTCCGAGGGTGAGGCGGGCATGCTCAGGCCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090180.4 |
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CDS TCA 90 bp | TCACAGTACTCATCCACACGGGGCAGGTTGGCGAAGCCCGTGAGCTaGAGGATGTCCTTATACCAAGTCTTGGGGGAGGCAGAGGCCAGG | + |
Preference number: 5 (lower is better) Translates to: SQYSSTRGRLAKPVS*RMSLYQVLGEAEAR Trigger: CCTGGCCTCTGCCTCCCCCAAGACTTGGTATAAGGACATCCTTCAGCTCACGGGCTTCGCCAACCTGCCCCGTGTGGATGAGTACTGTGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000090180.4 |
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CDS GCA 90 bp | TTCTCGACGCTGCTAGCATCCAAGCGGAGCACATGCTCCCCTCGATaGCCCACTGTGATGAAGGTGCAGATGGGTTGGAAGGCTCCTGTG | + |
Preference number: 5 (lower is better) Translates to: FSTLLASKRSTCSPR*PTVMKVQMGWKAPV Trigger: CACAGGAGCCTTCCAACCCATCTGCACCTTCATCACAGTGGGGCATCGAGGGGAGCATGTGCTCCGCTTGGATGCTAGCAGCGTCGAGAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090180.4 |
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CDS GCA 90 bp | GCTGTTGTGCTCTGTGCCAAAGACTCTGGTCATGAGCCCCGAAGCTaGTTTGTTTTGGCTCTGGCCCTGGCCCAGACACTGCACAGCAGG | + |
Preference number: 5 (lower is better) Translates to: AVVLCAKDSGHEPRS*FVLALALAQTLHSR Trigger: CCTGCTGTGCAGTGTCTGGGCCAGGGCCAGAGCCAAAACAAAGCAGCTTCGGGGCTCATGACCAGAGTCTTTGGCACAGAGCACAACAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090180.4 |
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CDS CCA 90 bp | CCAAAGACTCTGGTCATGAGCCCCGAAGCTGCTTTGTTTTGGCTCTaGCCCTGGCCCAGACACTGCACAGCAGGGTTGCCATGGCGTATG | + |
Preference number: 5 (lower is better) Translates to: PKTLVMSPEAALFWL*PWPRHCTAGLPWRM Trigger: CATACGCCATGGCAACCCTGCTGTGCAGTGTCTGGGCCAGGGCCAGAGCCAAAACAAAGCAGCTTCGGGGCTCATGACCAGAGTCTTTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090180.4 |
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CDS TCA 90 bp | GTCCCCTTATCCCCTGGCCTTTGTAAGAACCAGCGCACTGCAGCCTaGGGAGACTTGGGCAGGCACTCAAGGAAGGTGCTGTTGTGCTCT | + |
Preference number: 5 (lower is better) Translates to: VPLSPGLCKNQRTAA*GDLGRHSRKVLLCS Trigger: AGAGCACAACAGCACCTTCCTTGAGTGCCTGCCCAAGTCTCCTCAGGCTGCAGTGCGCTGGTTCTTACAAAGGCCAGGGGATAAGGGGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090180.4 |
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CDS TCA 90 bp | CATGTTCCAGAGTGGTGCAAGTGTAGTTTCCTGCGTCATGGCGGCTaGGCCTTCGGAACAGCAGCCCTTGGGCCGTCTGCACAACTCTCT | + |
Preference number: 5 (lower is better) Translates to: HVPEWCKCSFLRHGG*AFGTAALGPSAQLS Trigger: AGAGAGTTGTGCAGACGGCCCAAGGGCTGCTGTTCCGAAGGCTCAGCCGCCATGACGCAGGAAACTACACTTGCACCACTCTGGAACATG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090180.4 |
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CDS TCA 90 bp | CACGTTCACAGTACTCATCCACACGGGGCAGGTTGGCGAAGCCCGTaGGCTGAAGGATGTCCTTATACCAAGTCTTGGGGGAGGCAGAGG | + |
Preference number: 5 (lower is better) Translates to: HVHSTHPHGAGWRSP*AEGCPYTKSWGRQR Trigger: CCTCTGCCTCCCCCAAGACTTGGTATAAGGACATCCTTCAGCTCACGGGCTTCGCCAACCTGCCCCGTGTGGATGAGTACTGTGAACGTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000090180.4 |
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CDS CCA 90 bp | GCCGTAAGTCTCACACTGGTGCAGCTGCAGCCGGGCCACACCCAGTaGAGAGCCCACATACAGCGTTTGCCTTTTGACAGAGATCTCCAT | + |
Preference number: 5 (lower is better) Translates to: AVSLTLVQLQPGHTQ*RAHIQRLPFDRDLH Trigger: ATGGAGATCTCTGTCAAAAGGCAAACGCTGTATGTGGGCTCTCCACTGGGTGTGGCCCGGCTGCAGCTGCACCAGTGTGAGACTTACGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090180.4 |
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CDS TCA 90 bp | CTCGGCTTCCCAGAAAGAGGCGATCTCGATACTCATCCAGGTACATaGCTTGGAGGTCTAGGGAACCCCGTGGGCCCAGAAAGATGGCAG | + |
Preference number: 5 (lower is better) Translates to: LGFPERGDLDTHPGT*LGGLGNPVGPERWQ Trigger: CTGCCATCTTTCTGGGCCCACGGGGTTCCCTAGACCTCCAAGTCATGTACCTGGATGAGTATCGAGATCGCCTCTTTCTGGGAAGCCGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090180.4 |
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CDS TCA 90 bp | ACTCAAGGAAGGTGCTGTTGTGCTCTGTGCCAAAGACTCTGGTCATaGGCCCCGAAGCTGCTTTGTTTTGGCTCTGGCCCTGGCCCAGAC | + |
Preference number: 5 (lower is better) Translates to: TQGRCCCALCQRLWS*APKLLCFGSGPGPD Trigger: GTCTGGGCCAGGGCCAGAGCCAAAACAAAGCAGCTTCGGGGCTCATGACCAGAGTCTTTGGCACAGAGCACAACAGCACCTTCCTTGAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090180.4 |
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CDS CCA 90 bp | CTTCCCAGAAAGAGGCGATCTCGATACTCATCCAGGTACATGACTTaGAGGTCTAGGGAACCCCGTGGGCCCAGAAAGATGGCAGAGCGG | + |
Preference number: 5 (lower is better) Translates to: LPRKRRSRYSSRYMT*RSREPRGPRKMAER Trigger: CCGCTCTGCCATCTTTCTGGGCCCACGGGGTTCCCTAGACCTCCAAGTCATGTACCTGGATGAGTATCGAGATCGCCTCTTTCTGGGAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090180.4 |
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CDS CCA 90 bp | CCAGCAGATGGGTCCGGTTATGGGGTTGTAAGACCCGCACGAAGTTaGCACACTCCGTCAAAGGGTCTTTTCCCTTGCGGACACATTCCA | + |
Preference number: 5 (lower is better) Translates to: PADGSGYGVVRPARS*HTPSKGLFPCGHIP Trigger: TGGAATGTGTCCGCAAGGGAAAAGACCCTTTGACGGAGTGTGCCAACTTCGTGCGGGTCTTACAACCCCATAACCGGACCCATCTGCTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090180.4 |
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CDS CCA 90 bp | AGCTCCTCCAAAACCACCTCTTCAGGTTCAGTCAAGCCACCACCCTaGAGGGCAATGACTTTGAGCACAGAACCCGAATCAGTCCCTAGG | + |
Preference number: 5 (lower is better) Translates to: SSSKTTSSGSVKPPP*RAMTLSTEPESVPR Trigger: CCTAGGGACTGATTCGGGTTCTGTGCTCAAAGTCATTGCCCTCCAGGGTGGTGGCTTGACTGAACCTGAAGAGGTGGTTTTGGAGGAGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090180.4 |
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CDS-3UTR CAA 90 bp | ATGGTGCAAGTTCAGATCTCAGCACCCTGGGGGTGCCAGGGTAGAGGAAATAAACTGCTCTTCATCTTCTaGCCCAGTTCCAGCCCTGCC | + |
Preference number: 5 (lower is better) Translates to: MVQVQISAPWGCQGRGNKLLFIF*PSSSPA Trigger: GGCAGGGCTGGAACTGGGCAAGAAGATGAAGAGCAG...TTTATTTCCTCTACCCTGGCACCCCCAGGGTGCTGAGATCTGAACTTGCACCAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000090180.4 |
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CDS-3UTR CAA 90 bp | TGGGGGTGCCAGGGTAGAGGAAATAAACCCAAAGTCTTCGGGTTTGAAGTTCAGTGGGCAAAGGGCCCATaGAAGACCTCCCAGATGTCT | + |
Preference number: 5 (lower is better) Translates to: WGCQGRGNKPKVFGFEVQWAKGP*KTSQMS Trigger: AGACATCTGGGAGGTCTTCAATGGGCCCTTTGCCCA...CTGAACTTCAAACCCGAAGACTTTGGGTTTATTTCCTCTACCCTGGCACCCCCA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000090180.4 |
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CDS-3UTR CAA 90 bp | ACCCCCAGAACAGCAGGATTTACCATACCAGCTTTCTGTTCTCCCATAGAGAGAAAGATGGCAGAGCGGTaGGTAGACAGGAGATCTCTG | + |
Preference number: 5 (lower is better) Translates to: TPRTAGFTIPAFCSPIERKMAER*VDRRSL Trigger: CAGAGATCTCCTGTCTACCAACCGCTCTGCCATCTT...TCTCTCTATGGGAGAACAGAAAGCTGGTATGGTAAATCCTGCTGTTCTGGGGGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000090180.4 |
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CDS-3UTR CAA 90 bp | TCTGTGGGGCAAGTGTTTCTTATCAGGTTCTACCTTAGGAATCTACTTTCCCCTCACACCAGCCGGGCCTaGAGGAAAGTGCTCCATTTG | + |
Preference number: 5 (lower is better) Translates to: SVGQVFLIRFYLRNLLSPHTSRA*RKVLHL Trigger: CAAATGGAGCACTTTCCTCAAGGCCCGGCTGGTGTG...AGGGGAAAGTAGATTCCTAAGGTAGAACCTGATAAGAAACACTTGCCCCACAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090180.4 |
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CDS-3UTR CAA 90 bp | CACCCTGGGGGTGCCAGGGTAGAGGAAATAAACCCAAAGTCTTCGGGTTTGAAGTACAGCGTTTGCCTTTaGACAGAGATCTCCATCTCA | + |
Preference number: 5 (lower is better) Translates to: HPGGARVEEINPKSSGLKYSVCL*TEISIS Trigger: TGAGATGGAGATCTCTGTCAAAAGGCAAACGCTGTA...CTTCAAACCCGAAGACTTTGGGTTTATTTCCTCTACCCTGGCACCCCCAGGGTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000090180.4 |
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CDS-3UTR CAA 90 bp | AGATTTCCTCTAAGAGGTAATCAATCAGGAGTTCTGGACTCCTCTTTCCTAGCTTCGGAACAGCAGCCCTaGGGCCGTCTGCACAACTCT | + |
Preference number: 5 (lower is better) Translates to: RFPLRGNQSGVLDSSFLASEQQP*GRLHNS Trigger: AGAGTTGTGCAGACGGCCCAAGGGCTGCTGTTCCGA...AGCTAGGAAAGAGGAGTCCAGAACTCCTGATTGATTACCTCTTAGAGGAAATCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090180.4 |
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CDS-3UTR CAA 90 bp | TCTGTGGGGCAAGTGTTTCTTATCAGGTTCTACCTTAGGAATCTACTTTCCCCTAGGAAAGTGCTCCATTaGTTCACCAGCACCCGCTGG | + |
Preference number: 5 (lower is better) Translates to: SVGQVFLIRFYLRNLLSPRKVLH*FTSTRW Trigger: CCAGCGGGTGCTGGTGAACAAATGGAGCACTTTCCT...AGGGGAAAGTAGATTCCTAAGGTAGAACCTGATAAGAAACACTTGCCCCACAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090180.4 |
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CDS-3UTR CAA 90 bp | GCTCTGCTTTTTCTCATCAGAACTCAAGGCAACATGACAATAAAAATATCAACAGGCTGTGCGGTCATCTaGCTAGGACACACACCGGGG | + |
Preference number: 5 (lower is better) Translates to: ALLFLIRTQGNMTIKISTGCAVI*LGHTPG Trigger: CCCCGGTGTGTGTCCTAGCAAGATGACCGCACAGCC...TGTTGATATTTTTATTGTCATGTTGCCTTGAGTTCTGATGAGAAAAAGCAGAGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000090180.4 |
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CDS-3UTR CAA 90 bp | GCTCTGCTTTTTCTCATCAGAACTCAAGGCAACATGACAATAAAAATATCAACATCAAGGAAGGTGCTGTaGTGCTCTGTGCCAAAGACT | + |
Preference number: 5 (lower is better) Translates to: ALLFLIRTQGNMTIKISTSRKVL*CSVPKT Trigger: AGTCTTTGGCACAGAGCACAACAGCACCTTCCTTGA...TGTTGATATTTTTATTGTCATGTTGCCTTGAGTTCTGATGAGAAAAAGCAGAGC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000090180.4 |
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CDS GCA 72 bp | TGCCATGGCGTATGTCCTGCCGACGGAACCTGCGCTTaGCAGAGCTGGGGCGGTAGCGGGCACAGGCAGTGC | + |
Preference number: 6 (lower is better) Translates to: CHGVCPADGTCA*QSWGGSGHRQC Trigger: GCACTGCCTGTGCCCGCTACCGCCCCAGCTCTGGCAAGCGCAGGTTCCGTCGGCAGGACATACGCCATGGCA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090180.4 |
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CDS GCA 72 bp | CAGGGTTGCCATGGCGTATGTCCTGCCGACGGAACCTaGGCTTGCCAGAGCTGGGGCGGTAGCGGGCACAGG | + |
Preference number: 6 (lower is better) Translates to: QGCHGVCPADGT*ACQSWGGSGHR Trigger: CCTGTGCCCGCTACCGCCCCAGCTCTGGCAAGCGCAGGTTCCGTCGGCAGGACATACGCCATGGCAACCCTG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090180.4 |
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CDS CCA 72 bp | GTATGTCCTGCCGACGGAACCTGCGCTTGCCAGAGCTaGGGCGGTAGCGGGCACAGGCAGTGCCATCCCAAG | + |
Preference number: 6 (lower is better) Translates to: VCPADGTCACQS*GGSGHRQCHPK Trigger: CTTGGGATGGCACTGCCTGTGCCCGCTACCGCCCCAGCTCTGGCAAGCGCAGGTTCCGTCGGCAGGACATAC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090180.4 |
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CDS CAA 72 bp | GTGCTGCCAAAGGGTCGGCCTGGCTGTGCGGTCATCTaGCTAGGACACACACCGGGGCGAGGGAAGGGCACC | + |
Preference number: 6 (lower is better) Translates to: VLPKGRPGCAVI*LGHTPGRGKGT Trigger: GGTGCCCTTCCCTCGCCCCGGTGTGTGTCCTAGCAAGATGACCGCACAGCCAGGCCGACCCTTTGGCAGCAC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090180.4 |
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CDS GCA 72 bp | AGACACTGCACAGCAGGGTTGCCATGGCGTATGTCCTaGCGACGGAACCTGCGCTTGCCAGAGCTGGGGCGG | + |
Preference number: 6 (lower is better) Translates to: RHCTAGLPWRMS*RRNLRLPELGR Trigger: CCGCCCCAGCTCTGGCAAGCGCAGGTTCCGTCGGCAGGACATACGCCATGGCAACCCTGCTGTGCAGTGTCT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090180.4 |
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CDS GCA 72 bp | CCCAGTTCCAGCCCTGCCCAGCTCTTGCCCTTCGCTTaGTTTCCCTTTCCGCGGAAGGAGCCTGAGCGCTCC | + |
Preference number: 6 (lower is better) Translates to: PSSSPAQLLPFA*FPFPRKEPERS Trigger: GGAGCGCTCAGGCTCCTTCCGCGGAAAGGGAAAGCAAGCGAAGGGCAAGAGCTGGGCAGGGCTGGAACTGGG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090180.4 |
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CDS TCA 72 bp | CAGGGCGGCCACGCCGAGGCCTCACAGGCTGGAACATaGGTGGGTGGTCTCGGACAAACTGCAACACCTCGT | + |
Preference number: 6 (lower is better) Translates to: QGGHAEASQAGT*VGGLGQTATPR Trigger: ACGAGGTGTTGCAGTTTGTCCGAGACCACCCACTCATGTTCCAGCCTGTGAGGCCTCGGCGTGGCCGCCCTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090180.4 |
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CDS TCA 72 bp | CCACAATCTGGCGCAGTCGCTGAGCCAAGTGAGTTTTaGCCAGGACAGGGCGGCCACGCCGAGGCCTCACAG | + |
Preference number: 6 (lower is better) Translates to: PQSGAVAEPSEF*PGQGGHAEASQ Trigger: CTGTGAGGCCTCGGCGTGGCCGCCCTGTCCTGGTCAAAACTCACTTGGCTCAGCGACTGCGCCAGATTGTGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090180.4 |
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CDS TCA 72 bp | GCCCTTCGCTTGCTTTCCCTTTCCGCGGAAGGAGCCTaGGCGCTCCCCGACACCCCTGCACCATACACGTTC | + |
Preference number: 6 (lower is better) Translates to: ALRLLSLSAEGA*ALPDTPAPYTF Trigger: GAACGTGTATGGTGCAGGGGTGTCGGGGAGCGCTCAGGCTCCTTCCGCGGAAAGGGAAAGCAAGCGAAGGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090180.4 |
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CDS CCA 72 bp | TCCCTTGCGGACACATTCCACCTTCTGTCCTGGCTGTaGCAGCCACAAGACCTCCCGGGGGTCTGGCCATGC | + |
Preference number: 6 (lower is better) Translates to: SLADTFHLLSWL*QPQDLPGVWPC Trigger: GCATGGCCAGACCCCCGGGAGGTCTTGTGGCTGCCACAGCCAGGACAGAAGGTGGAATGTGTCCGCAAGGGA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000090180.4 |
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CDS CCA 72 bp | GCTCCCCACCTACAAAGGTGCTGGCGAAGGGTCGGCTaGGCTCATGTGGGCAACGCCCCCTTCCATTCTCGA | + |
Preference number: 6 (lower is better) Translates to: APHLQRCWRRVG*AHVGNAPFHSR Trigger: TCGAGAATGGAAGGGGGCGTTGCCCACATGAGCCCAGCCGACCCTTCGCCAGCACCTTTGTAGGTGGGGAGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000090180.4 |
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CDS CCA 72 bp | GCGGCCACGCCGAGGCCTCACAGGCTGGAACATGAGTaGGTGGTCTCGGACAAACTGCAACACCTCGTCTGG | + |
Preference number: 6 (lower is better) Translates to: AATPRPHRLEHE*VVSDKLQHLVW Trigger: CCAGACGAGGTGTTGCAGTTTGTCCGAGACCACCCACTCATGTTCCAGCCTGTGAGGCCTCGGCGTGGCCGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090180.4 |
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CDS CCA 72 bp | ACCAGGACAGGGCGGCCACGCCGAGGCCTCACAGGCTaGAACATGAGTGGGTGGTCTCGGACAAACTGCAAC | + |
Preference number: 6 (lower is better) Translates to: TRTGRPRRGLTG*NMSGWSRTNCN Trigger: GTTGCAGTTTGTCCGAGACCACCCACTCATGTTCCAGCCTGTGAGGCCTCGGCGTGGCCGCCCTGTCCTGGT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090180.4 |
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CDS CCA 72 bp | TACAAAGGTGCTGGCGAAGGGTCGGCTGGGCTCATGTaGGCAACGCCCCCTTCCATTCTCGACGCTGCTAGC | + |
Preference number: 6 (lower is better) Translates to: YKGAGEGSAGLM*ATPPSILDAAS Trigger: GCTAGCAGCGTCGAGAATGGAAGGGGGCGTTGCCCACATGAGCCCAGCCGACCCTTCGCCAGCACCTTTGTA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000090180.4 |
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CDS CCA 72 bp | GCAGCCATCACAAACCGGGGTTCATGTAGGAGGCTCTaGTCAGAGTCAGAACGCAGGGCTGGTCGGGGACCC | + |
Preference number: 6 (lower is better) Translates to: AAITNRGSCRRL*SESERRAGRGP Trigger: GGGTCCCCGACCAGCCCTGCGTTCTGACTCTGACCAGAGCCTCCTACATGAACCCCGGTTTGTGATGGCTGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090180.4 |
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CDS CCA 72 bp | GTCTGGGTAGTCCTTGGTGCTGCCAAAGGGTCGGCCTaGCTGTGCGGTCATCTTGCTAGGACACACACCGGG | + |
Preference number: 6 (lower is better) Translates to: VWVVLGAAKGSA*LCGHLARTHTG Trigger: CCCGGTGTGTGTCCTAGCAAGATGACCGCACAGCCAGGCCGACCCTTTGGCAGCACCAAGGACTACCCAGAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090180.4 |
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CDS CAA 72 bp | AGGCCAGGCTTCCCCAGGCTGAGGGCTCCTCTAGCCTaGACTCCCGAAGGAACAGGCTGTCCAGTTGCACAG | + |
Preference number: 6 (lower is better) Translates to: RPGFPRLRAPLA*TPEGTGCPVAQ Trigger: CTGTGCAACTGGACAGCCTGTTCCTTCGGGAGTCAAGGCTAGAGGAGCCCTCAGCCTGGGGAAGCCTGGCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090180.4 |
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CDS TCA 72 bp | GAGTGGTGCAAGTGTAGTTTCCTGCGTCATGGCGGCTaGGCCTTCGGAACAGCAGCCCTTGGGCCGTCTGCA | + |
Preference number: 6 (lower is better) Translates to: EWCKCSFLRHGG*AFGTAALGPSA Trigger: TGCAGACGGCCCAAGGGCTGCTGTTCCGAAGGCTCAGCCGCCATGACGCAGGAAACTACACTTGCACCACTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090180.4 |
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CDS GCA 72 bp | CTGTGGCAGCCACAAGACCTCCCGGGGGTCTGGCCATaGCTGATCCAGTCTCAGAGAGTAAAGGGCATCTCG | + |
Preference number: 6 (lower is better) Translates to: LWQPQDLPGVWP*LIQSQRVKGIS Trigger: CGAGATGCCCTTTACTCTCTGAGACTGGATCAGGCATGGCCAGACCCCCGGGAGGTCTTGTGGCTGCCACAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000090180.4 |
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CDS CCA 72 bp | GTCTTTTCCCTTGCGGACACATTCCACCTTCTGTCCTaGCTGTGGCAGCCACAAGACCTCCCGGGGGTCTGG | + |
Preference number: 6 (lower is better) Translates to: VFSLADTFHLLS*LWQPQDLPGVW Trigger: CCAGACCCCCGGGAGGTCTTGTGGCTGCCACAGCCAGGACAGAAGGTGGAATGTGTCCGCAAGGGAAAAGAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000090180.4 |
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CDS CCA 72 bp | CTCGGACAAACTGCAACACCTCGTCTGGGTAGTCCTTaGTGCTGCCAAAGGGTCGGCCTGGCTGTGCGGTCA | + |
Preference number: 6 (lower is better) Translates to: LGQTATPRLGSP*CCQRVGLAVRS Trigger: TGACCGCACAGCCAGGCCGACCCTTTGGCAGCACCAAGGACTACCCAGACGAGGTGTTGCAGTTTGTCCGAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090180.4 |
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CDS TCA 72 bp | TCCCCTGGCCTTTGTAAGAACCAGCGCACTGCAGCCTaGGGAGACTTGGGCAGGCACTCAAGGAAGGTGCTG | + |
Preference number: 6 (lower is better) Translates to: SPGLCKNQRTAA*GDLGRHSRKVL Trigger: CAGCACCTTCCTTGAGTGCCTGCCCAAGTCTCCTCAGGCTGCAGTGCGCTGGTTCTTACAAAGGCCAGGGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090180.4 |
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CDS GCA 72 bp | CCATTCTCGACGCTGCTAGCATCCAAGCGGAGCACATaGTCCCCTCGATGCCCCACTGTGATGAAGGTGCAG | + |
Preference number: 6 (lower is better) Translates to: PFSTLLASKRST*SPRCPTVMKVQ Trigger: CTGCACCTTCATCACAGTGGGGCATCGAGGGGAGCATGTGCTCCGCTTGGATGCTAGCAGCGTCGAGAATGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090180.4 |
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CDS GCA 72 bp | GGACAAACTGCAACACCTCGTCTGGGTAGTCCTTGGTaGTGCCAAAGGGTCGGCCTGGCTGTGCGGTCATCT | + |
Preference number: 6 (lower is better) Translates to: GQTATPRLGSPW*CQRVGLAVRSS Trigger: AGATGACCGCACAGCCAGGCCGACCCTTTGGCAGCACCAAGGACTACCCAGACGAGGTGTTGCAGTTTGTCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090180.4 |
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CDS CAA 90 bp | TTGTGCTCTGTGCCAAAGACTCTGGTCATGAGCCCCGAAGCTGCTTaGTTTTGGCTCTGGCCCTGGCCCAGACACTGCACAGCAGGGTTG | + |
Preference number: 6 (lower is better) Translates to: LCSVPKTLVMSPEAA*FWLWPWPRHCTAGL Trigger: CAACCCTGCTGTGCAGTGTCTGGGCCAGGGCCAGAGCCAAAACAAAGCAGCTTCGGGGCTCATGACCAGAGTCTTTGGCACAGAGCACAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090180.4 |
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CDS TCA 72 bp | TCATCCACACGGGGCAGGTTGGCGAAGCCCGTGAGCTaGAGGATGTCCTTATACCAAGTCTTGGGGGAGGCA | + |
Preference number: 6 (lower is better) Translates to: SSTRGRLAKPVS*RMSLYQVLGEA Trigger: TGCCTCCCCCAAGACTTGGTATAAGGACATCCTTCAGCTCACGGGCTTCGCCAACCTGCCCCGTGTGGATGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000090180.4 |
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CDS GCA 72 bp | CTCTGTGCCAAAGACTCTGGTCATGAGCCCCGAAGCTaGTTTGTTTTGGCTCTGGCCCTGGCCCAGACACTG | + |
Preference number: 6 (lower is better) Translates to: LCAKDSGHEPRS*FVLALALAQTL Trigger: CAGTGTCTGGGCCAGGGCCAGAGCCAAAACAAAGCAGCTTCGGGGCTCATGACCAGAGTCTTTGGCACAGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090180.4 |
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CDS CAA 72 bp | GTGCCAAAGACTCTGGTCATGAGCCCCGAAGCTGCTTaGTTTTGGCTCTGGCCCTGGCCCAGACACTGCACA | + |
Preference number: 6 (lower is better) Translates to: VPKTLVMSPEAA*FWLWPWPRHCT Trigger: TGTGCAGTGTCTGGGCCAGGGCCAGAGCCAAAACAAAGCAGCTTCGGGGCTCATGACCAGAGTCTTTGGCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090180.4 |
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CDS CAA 72 bp | TTCATCTTCTTGCCCAGTTCCAGCCCTGCCCAGCTCTaGCCCTTCGCTTGCTTTCCCTTTCCGCGGAAGGAG | + |
Preference number: 6 (lower is better) Translates to: FIFLPSSSPAQL*PFACFPFPRKE Trigger: CTCCTTCCGCGGAAAGGGAAAGCAAGCGAAGGGCAAGAGCTGGGCAGGGCTGGAACTGGGCAAGAAGATGAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090180.4 |
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CDS CAA 90 bp | GCCAGCAGATGGGTCCGGTTATGGGGTTGTAAGACCCGCACGAAGTaGGCACACTCCGTCAAAGGGTCTTTTCCCTTGCGGACACATTCC | + |
Preference number: 6 (lower is better) Translates to: ASRWVRLWGCKTRTK*AHSVKGSFPLRTHS Trigger: GGAATGTGTCCGCAAGGGAAAAGACCCTTTGACGGAGTGTGCCAACTTCGTGCGGGTCTTACAACCCCATAACCGGACCCATCTGCTGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090180.4 |
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CDS TCA 72 bp | GATGCTGAGGGCCATCTCGGTGGGCAAAGGGCCCATTaGAGACCTCCCAGATGTCTACCATGTGGTACACAC | + |
Preference number: 6 (lower is better) Translates to: DAEGHLGGQRAH*RPPRCLPCGTH Trigger: GTGTGTACCACATGGTAGACATCTGGGAGGTCTTCAATGGGCCCTTTGCCCACCGAGATGGCCCTCAGCATC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090180.4 |
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CDS TCA 72 bp | AGTACTCATCCACACGGGGCAGGTTGGCGAAGCCCGTaGGCTGAAGGATGTCCTTATACCAAGTCTTGGGGG | + |
Preference number: 6 (lower is better) Translates to: STHPHGAGWRSP*AEGCPYTKSWG Trigger: CCCCCAAGACTTGGTATAAGGACATCCTTCAGCTCACGGGCTTCGCCAACCTGCCCCGTGTGGATGAGTACT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090180.4 |
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CDS CCA 72 bp | GGGTCCGGTTATGGGGTTGTAAGACCCGCACGAAGTTaGCACACTCCGTCAAAGGGTCTTTTCCCTTGCGGA | + |
Preference number: 6 (lower is better) Translates to: GSGYGVVRPARS*HTPSKGLFPCG Trigger: TCCGCAAGGGAAAAGACCCTTTGACGGAGTGTGCCAACTTCGTGCGGGTCTTACAACCCCATAACCGGACCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090180.4 |
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CDS CAA 72 bp | TGGGTCCGGTTATGGGGTTGTAAGACCCGCACGAAGTaGGCACACTCCGTCAAAGGGTCTTTTCCCTTGCGG | + |
Preference number: 6 (lower is better) Translates to: WVRLWGCKTRTK*AHSVKGSFPLR Trigger: CCGCAAGGGAAAAGACCCTTTGACGGAGTGTGCCAACTTCGTGCGGGTCTTACAACCCCATAACCGGACCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090180.4 |
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CDS TCA 72 bp | CCAGAAAGAGGCGATCTCGATACTCATCCAGGTACATaGCTTGGAGGTCTAGGGAACCCCGTGGGCCCAGAA | + |
Preference number: 6 (lower is better) Translates to: PERGDLDTHPGT*LGGLGNPVGPE Trigger: TTCTGGGCCCACGGGGTTCCCTAGACCTCCAAGTCATGTACCTGGATGAGTATCGAGATCGCCTCTTTCTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090180.4 |
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CDS TCA 72 bp | AGGTGCTGTTGTGCTCTGTGCCAAAGACTCTGGTCATaGGCCCCGAAGCTGCTTTGTTTTGGCTCTGGCCCT | + |
Preference number: 6 (lower is better) Translates to: RCCCALCQRLWS*APKLLCFGSGP Trigger: AGGGCCAGAGCCAAAACAAAGCAGCTTCGGGGCTCATGACCAGAGTCTTTGGCACAGAGCACAACAGCACCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090180.4 |
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CDS CCA 72 bp | GAAGTACACCTTGTCGTCGTCCCGGTCAGAGTTATCTaGGATCCGAGCAGCCATCACAAACCGGGGTTCATG | + |
Preference number: 6 (lower is better) Translates to: EVHLVVVPVRVI*DPSSHHKPGFM Trigger: CATGAACCCCGGTTTGTGATGGCTGCTCGGATCCCAGATAACTCTGACCGGGACGACGACAAGGTGTACTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090180.4 |
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CDS TCA 72 bp | GGAAAATCATGGCCTCACGTCCCAGGAAATCGGCAGTaGGACCTGTGTATAGCTCCCCACCTACAAAGGTGC | + |
Preference number: 6 (lower is better) Translates to: GKSWPHVPGNRQ*DLCIAPHLQRC Trigger: GCACCTTTGTAGGTGGGGAGCTATACACAGGTCTCACTGCCGATTTCCTGGGACGTGAGGCCATGATTTTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090180.4 |
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CDS CCA 72 bp | AAGAGGCGATCTCGATACTCATCCAGGTACATGACTTaGAGGTCTAGGGAACCCCGTGGGCCCAGAAAGATG | + |
Preference number: 6 (lower is better) Translates to: KRRSRYSSRYMT*RSREPRGPRKM Trigger: CATCTTTCTGGGCCCACGGGGTTCCCTAGACCTCCAAGTCATGTACCTGGATGAGTATCGAGATCGCCTCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090180.4 |
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CDS CAA 72 bp | GGTTCAGTCAAGCCACCACCCTGGAGGGCAATGACTTaGAGCACAGAACCCGAATCAGTCCCTAGGAAGATG | + |
Preference number: 6 (lower is better) Translates to: GSVKPPPWRAMT*STEPESVPRKM Trigger: CATCTTCCTAGGGACTGATTCGGGTTCTGTGCTCAAAGTCATTGCCCTCCAGGGTGGTGGCTTGACTGAACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090180.4 |
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CDS CAA 72 bp | ACACCCAGTGGAGAGCCCACATACAGCGTTTGCCTTTaGACAGAGATCTCCATCTCAGTGATGGGCGTTGGC | + |
Preference number: 6 (lower is better) Translates to: TPSGEPTYSVCL*TEISISVMGVG Trigger: GCCAACGCCCATCACTGAGATGGAGATCTCTGTCAAAAGGCAAACGCTGTATGTGGGCTCTCCACTGGGTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090180.4 |
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CDS CCA 72 bp | TCCATCTCAGTGATGGGCGTTGGCACCTTAAACACCTaGAGCTCCTCCAAAACCACCTCTTCAGGTTCAGTC | + |
Preference number: 6 (lower is better) Translates to: SISVMGVGTLNT*SSSKTTSSGSV Trigger: GACTGAACCTGAAGAGGTGGTTTTGGAGGAGCTCCAGGTGTTTAAGGTGCCAACGCCCATCACTGAGATGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090180.4 |
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CDS CCA 72 bp | AAAACCACCTCTTCAGGTTCAGTCAAGCCACCACCCTaGAGGGCAATGACTTTGAGCACAGAACCCGAATCA | + |
Preference number: 6 (lower is better) Translates to: KTTSSGSVKPPP*RAMTLSTEPES Trigger: TGATTCGGGTTCTGTGCTCAAAGTCATTGCCCTCCAGGGTGGTGGCTTGACTGAACCTGAAGAGGTGGTTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090180.4 |