RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SEMA3D (Mus musculus)

Ensembl gene IDs: ENSMUSG00000040254

Ensembl transcript IDs: ENSMUST00000030868.11, ENSMUST00000197927.2

Found 245 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp AAGGAAATTGGTGAGGATCATTACTACCCTCTCACAGAGCATTACTaGAGTACACTAGATGTAGCCTGGTCCACAAAGAGGGAACATGCC +
Preference number: 1 (lower is better)
Translates to: KEIGEDHYYPLTEHY*STLDVAWSTKREHA
Trigger: GGCATGTTCCCTCTTTGTGGACCAGGCTACATCTAGTGTACTGCAGTAATGCTCTGTGAGAGGGTAGTAATGATCCTCACCAATTTCCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030868.11
3UTR TCA 90 bp AGCATAGCATCCTGTGCCTCCGTGAGACTCCATGGGAAGCATGTATaGGTTAGTATAAGGGATGTACAAAACAGAAGACATTATTTGTGC +
Preference number: 1 (lower is better)
Translates to: SIASCASVRLHGKHV*VSIRDVQNRRHYLC
Trigger: GCACAAATAATGTCTTCTGTTTTGTACATCCCTTATACTAACTCATACATGCTTCCCATGGAGTCTCACGGAGGCACAGGATGCTATGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030868.11
3UTR GCA 90 bp CATGTTGTAAGTAAGTCTTGCTTTAAACAAATCATCCTGGAATTGTaGATCCGAGAGCTATTGTGGATTCTGCAGTGTGCTCAGTTTTTC +
Preference number: 1 (lower is better)
Translates to: HVVSKSCFKQIILEL*IRELLWILQCAQFF
Trigger: GAAAAACTGAGCACACTGCAGAATCCACAATAGCTCTCGGATGCACAATTCCAGGATGATTTGTTTAAAGCAAGACTTACTTACAACATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000030868.11
3UTR TCA 90 bp TTGACACAGGCTAGCAAAATACAAATGGTACTTATGCTAACGGTGTaGGTGTTTTCTTTAGATGTTGAAGACTTCCTTGTGAAACTGCTG +
Preference number: 1 (lower is better)
Translates to: LTQASKIQMVLMLTV*VFSLDVEDFLVKLL
Trigger: CAGCAGTTTCACAAGGAAGTCTTCAACATCTAAAGAAAACACTCACACCGTTAGCATAAGTACCATTTGTATTTTGCTAGCCTGTGTCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030868.11
3UTR-3UTR GCA 90 bp AGCCTGGTCCACAAAGAGGGAACATGCCTTTCTAAATTCCCACGCCTGACTCCAAGCTGTTTTAAAGTGTaGCTTTTCTCCAGTTCCTAC +
Preference number: 2 (lower is better)
Translates to: SLVHKEGTCLSKFPRLTPSCFKV*LFSSSY
Trigger: GTAGGAACTGGAGAAAAGGCACACTTTAAAACAGCT...TGGAGTCAGGCGTGGGAATTTAGAAAGGCATGTTCCCTCTTTGTGGACCAGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030868.11
3UTR-3UTR GCA 90 bp GACTTCCTTGTGAAACTGCTGAAAACAACACTGCTTGAAAGTTTATGTAACGAGCAGCATAGCATCCTGTaGCTCCGTGAGACTCCATGG +
Preference number: 2 (lower is better)
Translates to: DFLVKLLKTTLLESLCNEQHSIL*LRETPW
Trigger: CCATGGAGTCTCACGGAGGCACAGGATGCTATGCTG...CTCGTTACATAAACTTTCAAGCAGTGTTGTTTTCAGCAGTTTCACAAGGAAGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030868.11
3UTR-3UTR GCA 90 bp GATAGATTGCTTGACTCTGTAAAACTGCTTTTTAATCACACAGGCTTCTCACAGGCATGGGAAAGTCCATaGTTAATGGACATGCACGGG +
Preference number: 2 (lower is better)
Translates to: DRLLDSVKLLFNHTGFSQAWESP*LMDMHG
Trigger: CCCGTGCATGTCCATTAAGCATGGACTTTCCCATGC...CTGTGAGAAGCCTGTGTGATTAAAAAGCAGTTTTACAGAGTCAAGCAATCTATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000030868.11
3UTR-3UTR GCA 90 bp TCTTTTACCATGCTTCCCAAAGAGCACAGGAAGTGTGTACTAAGTTCCATTGTCCACAAAGAGGGAACATaGCTTTCTAAATTCCCACGC +
Preference number: 2 (lower is better)
Translates to: SFTMLPKEHRKCVLSSIVHKEGT*LSKFPR
Trigger: GCGTGGGAATTTAGAAAGGCATGTTCCCTCTTTGTG...GACAATGGAACTTAGTACACACTTCCTGTGCTCTTTGGGAAGCATGGTAAAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030868.11
3UTR-3UTR CCA 90 bp TCTTTTACCATGCTTCCCAAAGAGCACAGGAAGTGTGTACTAAGTTCCATTGTCCCAAGTGTGGCCTGTTaGCTCCTTGAGAAAGTTTTT +
Preference number: 2 (lower is better)
Translates to: SFTMLPKEHRKCVLSSIVPSVAC*LLEKVF
Trigger: AAAAACTTTCTCAAGGAGCCAACAGGCCACACTTGG...GACAATGGAACTTAGTACACACTTCCTGTGCTCTTTGGGAAGCATGGTAAAAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030868.11
3UTR-3UTR CCA 90 bp CATCCATTCAACAAATATATAGCCCCACTCCCCACCTTGGTCATCTACTCAATTACACTAGATGTAGCCTaGTCCACAAAGAGGGAACAT +
Preference number: 2 (lower is better)
Translates to: HPFNKYIAPLPTLVIYSITLDVA*STKREH
Trigger: ATGTTCCCTCTTTGTGGACCAGGCTACATCTAGTGT...AATTGAGTAGATGACCAAGGTGGGGAGTGGGGCTATATATTTGTTGAATGGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030868.11
3UTR CAA 90 bp CTGGAGAGACTGGCAGGAAAACACTGTTCAAAGGCAAAGTTGAATTaGACACAGGCTAGCAAAATACAAATGGTACTTATGCTAACGGTG +
Preference number: 2 (lower is better)
Translates to: LERLAGKHCSKAKLN*TQASKIQMVLMLTV
Trigger: CACCGTTAGCATAAGTACCATTTGTATTTTGCTAGCCTGTGTCAAATTCAACTTTGCCTTTGAACAGTGTTTTCCTGCCAGTCTCTCCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030868.11
3UTR-3UTR TCA 90 bp CATCCATTCAACAAATATATAGCCCCACTCCCCACCTTGGTCATCTACTCAATTCATGGGAAGCATGTATaGGTTAGTATAAGGGATGTA +
Preference number: 2 (lower is better)
Translates to: HPFNKYIAPLPTLVIYSIHGKHV*VSIRDV
Trigger: TACATCCCTTATACTAACTCATACATGCTTCCCATG...AATTGAGTAGATGACCAAGGTGGGGAGTGGGGCTATATATTTGTTGAATGGATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030868.11
3UTR CAA 90 bp TCTTGCTTTAAACAAATCATCCTGGAATTGTGCATCCGAGAGCTATaGTGGATTCTGCAGTGTGCTCAGTTTTTCTATGACTACTTTGCA +
Preference number: 2 (lower is better)
Translates to: SCFKQIILELCIREL*WILQCAQFFYDYFA
Trigger: TGCAAAGTAGTCATAGAAAAACTGAGCACACTGCAGAATCCACAATAGCTCTCGGATGCACAATTCCAGGATGATTTGTTTAAAGCAAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000030868.11
3UTR-3UTR GCA 90 bp GATAGATTGCTTGACTCTGTAAAACTGCTTTTTAATCACACAGGCTTCTCACAGCCGTCATCAAAATTTTaGCATTATCCATCCATTCAA +
Preference number: 2 (lower is better)
Translates to: DRLLDSVKLLFNHTGFSQPSSKF*HYPSIQ
Trigger: TTGAATGGATGGATAATGGCAAAATTTTGATGACGG...CTGTGAGAAGCCTGTGTGATTAAAAAGCAGTTTTACAGAGTCAAGCAATCTATC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENSMUST00000030868.11
3UTR-3UTR CCA 90 bp GACTTCCTTGTGAAACTGCTGAAAACAACACTGCTTGAAAGTTTATGTAACGAGTACAGATTTTGTTCTTaGAAAGCTGGTTCAGATGAT +
Preference number: 2 (lower is better)
Translates to: DFLVKLLKTTLLESLCNEYRFCS*KAGSDD
Trigger: ATCATCTGAACCAGCTTTCCAAGAACAAAATCTGTA...CTCGTTACATAAACTTTCAAGCAGTGTTGTTTTCAGCAGTTTCACAAGGAAGTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030868.11
3UTR GCA 72 bp TACACTAGATGTAGCCTGGTCCACAAAGAGGGAACATaGCTTTCTAAATTCCCACGCCTGACTCCAAGTGTG +
Preference number: 3 (lower is better)
Translates to: YTRCSLVHKEGT*LSKFPRLTPSV
Trigger: CACACTTGGAGTCAGGCGTGGGAATTTAGAAAGGCATGTTCCCTCTTTGTGGACCAGGCTACATCTAGTGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030868.11
3UTR GCA 72 bp GGTGAGGATCATTACTACCCTCTCACAGAGCATTACTaGAGTACACTAGATGTAGCCTGGTCCACAAAGAGG +
Preference number: 3 (lower is better)
Translates to: GEDHYYPLTEHY*STLDVAWSTKR
Trigger: CCTCTTTGTGGACCAGGCTACATCTAGTGTACTGCAGTAATGCTCTGTGAGAGGGTAGTAATGATCCTCACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030868.11
3UTR GCA 72 bp GATGTCCTATATAGTCTTACTCAGCATAGCATCCTGTaGCTCCGTGAGACTCCATGGGAAGCATGTATGAGT +
Preference number: 3 (lower is better)
Translates to: DVLYSLTQHSIL*LRETPWEACMS
Trigger: ACTCATACATGCTTCCCATGGAGTCTCACGGAGGCACAGGATGCTATGCTGAGTAAGACTATATAGGACATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030868.11
3UTR TCA 72 bp GGAAGGCTAAGGGTTTTGTGCTACAGGAAGGAAAGTTaGTTTCTGGAGAGACTGGCAGGAAAACACTGTTCA +
Preference number: 3 (lower is better)
Translates to: GRLRVLCYRKES*FLERLAGKHCS
Trigger: TGAACAGTGTTTTCCTGCCAGTCTCTCCAGAAATCAACTTTCCTTCCTGTAGCACAAAACCCTTAGCCTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030868.11
3UTR GCA 72 bp TCTAGAGCACACCATGGGGTTCTGTCCATGATGCTGTaGTTGAGCAATCAAAAGGAAATTGGTGAGGATCAT +
Preference number: 3 (lower is better)
Translates to: SRAHHGVLSMML*LSNQKEIGEDH
Trigger: ATGATCCTCACCAATTTCCTTTTGATTGCTCAAGCACAGCATCATGGACAGAACCCCATGGTGTGCTCTAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030868.11
3UTR CCA 72 bp CTCACAGAGCATTACTGCAGTACACTAGATGTAGCCTaGTCCACAAAGAGGGAACATGCCTTTCTAAATTCC +
Preference number: 3 (lower is better)
Translates to: LTEHYCSTLDVA*STKREHAFLNS
Trigger: GGAATTTAGAAAGGCATGTTCCCTCTTTGTGGACCAGGCTACATCTAGTGTACTGCAGTAATGCTCTGTGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030868.11
3UTR TCA 72 bp TCCTGTGCCTCCGTGAGACTCCATGGGAAGCATGTATaGGTTAGTATAAGGGATGTACAAAACAGAAGACAT +
Preference number: 3 (lower is better)
Translates to: SCASVRLHGKHV*VSIRDVQNRRH
Trigger: ATGTCTTCTGTTTTGTACATCCCTTATACTAACTCATACATGCTTCCCATGGAGTCTCACGGAGGCACAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030868.11
3UTR GCA 72 bp TCCTGGAATTGTGCATCCGAGAGCTATTGTGGATTCTaGAGTGTGCTCAGTTTTTCTATGACTACTTTGCAG +
Preference number: 3 (lower is better)
Translates to: SWNCASESYCGF*SVLSFSMTTLQ
Trigger: CTGCAAAGTAGTCATAGAAAAACTGAGCACACTGCAGAATCCACAATAGCTCTCGGATGCACAATTCCAGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000030868.11
3UTR CCA 72 bp CAAATCATCCTGGAATTGTGCATCCGAGAGCTATTGTaGATTCTGCAGTGTGCTCAGTTTTTCTATGACTAC +
Preference number: 3 (lower is better)
Translates to: QIILELCIRELL*ILQCAQFFYDY
Trigger: GTAGTCATAGAAAAACTGAGCACACTGCAGAATCCACAATAGCTCTCGGATGCACAATTCCAGGATGATTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000030868.11
3UTR-3UTR CAA 90 bp GATAGATTGCTTGACTCTGTAAAACTGCTTTTTAATCACACAGGCTTCTCACAGTTGCTGATACAGATTTaGTTCTTGGAAAGCTGGTTC +
Preference number: 3 (lower is better)
Translates to: DRLLDSVKLLFNHTGFSQLLIQI*FLESWF
Trigger: GAACCAGCTTTCCAAGAACAAAATCTGTATCAGCAA...CTGTGAGAAGCCTGTGTGATTAAAAAGCAGTTTTACAGAGTCAAGCAATCTATC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000030868.11
3UTR-3UTR CAA 90 bp GACTTCCTTGTGAAACTGCTGAAAACAACACTGCTTGAAAGTTTATGTAACGAGTCCATGATGCTGTGCTaGAGCAATCAAAAGGAAATT +
Preference number: 3 (lower is better)
Translates to: DFLVKLLKTTLLESLCNESMMLC*SNQKEI
Trigger: AATTTCCTTTTGATTGCTCAAGCACAGCATCATGGA...CTCGTTACATAAACTTTCAAGCAGTGTTGTTTTCAGCAGTTTCACAAGGAAGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030868.11
3UTR-3UTR CAA 90 bp GATAGATTGCTTGACTCTGTAAAACTGCTTTTTAATCACACAGGCTTCTCACAGCCCGTCATCAAAATTTaGCCATTATCCATCCATTCA +
Preference number: 3 (lower is better)
Translates to: DRLLDSVKLLFNHTGFSQPVIKI*PLSIHS
Trigger: TGAATGGATGGATAATGGCAAAATTTTGATGACGGG...CTGTGAGAAGCCTGTGTGATTAAAAAGCAGTTTTACAGAGTCAAGCAATCTATC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000030868.11
3UTR TCA 72 bp AATTCATTGATACCCACCACTGACAATGCTAAGAAGTaGAGACCAACTGTGGCTTCTGACAGGTTTTATTTT +
Preference number: 3 (lower is better)
Translates to: NSLIPTTDNAKK*RPTVASDRFYF
Trigger: AAAATAAAACCTGTCAGAAGCCACAGTTGGTCTTCACTTCTTAGCATTGTCAGTGGTGGGTATCAATGAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030868.11
3UTR TCA 72 bp ACTTATGCTAACGGTGTGAGTGTTTTCTTTAGATGTTaGAGACTTCCTTGTGAAACTGCTGAAAACAACACT +
Preference number: 3 (lower is better)
Translates to: TYANGVSVFFRC*RLPCETAENNT
Trigger: AGTGTTGTTTTCAGCAGTTTCACAAGGAAGTCTTCAACATCTAAAGAAAACACTCACACCGTTAGCATAAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030868.11
3UTR TCA 72 bp GCTAGCAAAATACAAATGGTACTTATGCTAACGGTGTaGGTGTTTTCTTTAGATGTTGAAGACTTCCTTGTG +
Preference number: 3 (lower is better)
Translates to: ASKIQMVLMLTV*VFSLDVEDFLV
Trigger: CACAAGGAAGTCTTCAACATCTAAAGAAAACACTCACACCGTTAGCATAAGTACCATTTGTATTTTGCTAGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030868.11
3UTR GCA 72 bp ATGATTAGTAGTCTAACCATGACACAAGGATTTGTATaGACTTCTGCTGGAGATGTGATTCATTCTGGTTTA +
Preference number: 3 (lower is better)
Translates to: MISSLTMTQGFV*TSAGDVIHSGL
Trigger: TAAACCAGAATGAATCACATCTCCAGCAGAAGTGCATACAAATCCTTGTGTCATGGTTAGACTACTAATCAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030868.11
CDS-3UTR TCA 90 bp AGCCTGGTCCACAAAGAGGGAACATGCCTTTCTAAATTCCCACGCCTGACTCCAGGGTGCTTGAATACCTaGAGCTCCTCCAGTACGACC +
Preference number: 4 (lower is better)
Translates to: SLVHKEGTCLSKFPRLTPGCLNT*SSSSTT
Trigger: GGTCGTACTGGAGGAGCTTCAGGTATTCAAGCACCC...TGGAGTCAGGCGTGGGAATTTAGAAAGGCATGTTCCCTCTTTGTGGACCAGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030868.11
CDS-3UTR CCA 90 bp AGCCTGGTCCACAAAGAGGGAACATGCCTTTCTAAATTCCCACGCCTGACTCCACATGTGCTTCCACTTTaGGCTGCCCTTGTTGCGCTG +
Preference number: 4 (lower is better)
Translates to: SLVHKEGTCLSKFPRLTPHVLPL*AALVAL
Trigger: CAGCGCAACAAGGGCAGCCCAAAGTGGAAGCACATG...TGGAGTCAGGCGTGGGAATTTAGAAAGGCATGTTCCCTCTTTGTGGACCAGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030868.11
CDS-3UTR TCA 90 bp GGAGTAGACAGGTCTCCTAACCATTTCTCCAGCCACACAGTGGACTCTTTTGTCTACCCACACAGCGGATaGAACGCTCCAGTTCCACAC +
Preference number: 4 (lower is better)
Translates to: GVDRSPNHFSSHTVDSFVYPHSG*NAPVPH
Trigger: GTGTGGAACTGGAGCGTTTCATCCGCTGTGTGGGTA...GACAAAAGAGTCCACTGTGTGGCTGGAGAAATGGTTAGGAGACCTGTCTACTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000197927.2
CDS-3UTR TCA 90 bp GGAGTAGACAGGTCTCCTAACCATTTCTCCAGCCACACAGTGGACTCTTTTGTCGGGTGCTTGAATACCTaGAGCTCCTCCAGTACGACC +
Preference number: 4 (lower is better)
Translates to: GVDRSPNHFSSHTVDSFVGCLNT*SSSSTT
Trigger: GGTCGTACTGGAGGAGCTTCAGGTATTCAAGCACCC...GACAAAAGAGTCCACTGTGTGGCTGGAGAAATGGTTAGGAGACCTGTCTACTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000197927.2
CDS-3UTR TCA 90 bp GGAGTAGACAGGTCTCCTAACCATTTCTCCAGCCACACAGTGGACTCTTTTGTCTCGATGCTCATCTCCTaGCCGCTGGATGTACCACTC +
Preference number: 4 (lower is better)
Translates to: GVDRSPNHFSSHTVDSFVSMLIS*PLDVPL
Trigger: GAGTGGTACATCCAGCGGTCAGGAGATGAGCATCGA...GACAAAAGAGTCCACTGTGTGGCTGGAGAAATGGTTAGGAGACCTGTCTACTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000197927.2
CDS-3UTR GCA 90 bp GGAGTAGACAGGTCTCCTAACCATTTCTCCAGCCACACAGTGGACTCTTTTGTCCTTACCTCCTCTCGATaGTCATCTCCTGACCGCTGG +
Preference number: 4 (lower is better)
Translates to: GVDRSPNHFSSHTVDSFVLTSSR*SSPDRW
Trigger: CCAGCGGTCAGGAGATGAGCATCGAGAGGAGGTAAG...GACAAAAGAGTCCACTGTGTGGCTGGAGAAATGGTTAGGAGACCTGTCTACTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000197927.2
CDS-3UTR CCA 90 bp AGCCTGGTCCACAAAGAGGGAACATGCCTTTCTAAATTCCCACGCCTGACTCCAATCTGCTCACAGTACTaGTCCAGGCTGAAGTTCGGG +
Preference number: 4 (lower is better)
Translates to: SLVHKEGTCLSKFPRLTPICSQY*SRLKFG
Trigger: CCCGAACTTCAGCCTGGACCAGTACTGTGAGCAGAT...TGGAGTCAGGCGTGGGAATTTAGAAAGGCATGTTCCCTCTTTGTGGACCAGGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030868.11
CDS-3UTR TCA 90 bp GGAGTAGACAGGTCTCCTAACCATTTCTCCAGCCACACAGTGGACTCTTTTGTCGCCCCAGAGACCTTGTaGATGCAGTGTCTTTGCCAA +
Preference number: 4 (lower is better)
Translates to: GVDRSPNHFSSHTVDSFVAPETL*MQCLCQ
Trigger: TTGGCAAAGACACTGCATTCACAAGGTCTCTGGGGC...GACAAAAGAGTCCACTGTGTGGCTGGAGAAATGGTTAGGAGACCTGTCTACTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000197927.2
CDS-3UTR TCA 90 bp GGAGTAGACAGGTCTCCTAACCATTTCTCCAGCCACACAGTGGACTCTTTTGTCAGACAGCAGAGCCTTTaGAGATGGAGCTGGTTGTGG +
Preference number: 4 (lower is better)
Translates to: GVDRSPNHFSSHTVDSFVRQQSL*RWSWLW
Trigger: CCACAACCAGCTCCATCTTCAAAGGCTCTGCTGTCT...GACAAAAGAGTCCACTGTGTGGCTGGAGAAATGGTTAGGAGACCTGTCTACTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000197927.2
CDS-3UTR GCA 90 bp AGCCTGGTCCACAAAGAGGGAACATGCCTTTCTAAATTCCCACGCCTGACTCCACTCCTAGGAGCAGTATaGCCCTCTCCTCATCCAAAA +
Preference number: 4 (lower is better)
Translates to: SLVHKEGTCLSKFPRLTPLLGAV*PSPHPK
Trigger: TTTTGGATGAGGAGAGGGGCATACTGCTCCTAGGAG...TGGAGTCAGGCGTGGGAATTTAGAAAGGCATGTTCCCTCTTTGTGGACCAGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030868.11
CDS-3UTR GCA 90 bp GGAGTAGACAGGTCTCCTAACCATTTCTCCAGCCACACAGTGGACTCTTTTGTCAGGGACATTTCAGTCTaGCAGACTCCAGGTTGTGCG +
Preference number: 4 (lower is better)
Translates to: GVDRSPNHFSSHTVDSFVRDISV*QTPGCA
Trigger: CGCACAACCTGGAGTCTGGCAGACTGAAATGTCCCT...GACAAAAGAGTCCACTGTGTGGCTGGAGAAATGGTTAGGAGACCTGTCTACTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000197927.2
CDS-3UTR CCA 90 bp GGAGTAGACAGGTCTCCTAACCATTTCTCCAGCCACACAGTGGACTCTTTTGTCCTGAGCAGGAAGACATaGTCTTTGGCTCCTAGGAGC +
Preference number: 4 (lower is better)
Translates to: GVDRSPNHFSSHTVDSFVLSRKT*SLAPRS
Trigger: GCTCCTAGGAGCCAAAGACCATGTCTTCCTGCTCAG...GACAAAAGAGTCCACTGTGTGGCTGGAGAAATGGTTAGGAGACCTGTCTACTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000197927.2
CDS-3UTR CCA 90 bp GGAGTAGACAGGTCTCCTAACCATTTCTCCAGCCACACAGTGGACTCTTTTGTCGTCATAGGTTTTGCTTaGACACGTTCCAGGTCGGGG +
Preference number: 4 (lower is better)
Translates to: GVDRSPNHFSSHTVDSFVVIGFA*TRSRSG
Trigger: CCCCGACCTGGAACGTGTCCAAGCAAAACCTATGAC...GACAAAAGAGTCCACTGTGTGGCTGGAGAAATGGTTAGGAGACCTGTCTACTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000197927.2
CDS-3UTR CCA 90 bp GGAGTAGACAGGTCTCCTAACCATTTCTCCAGCCACACAGTGGACTCTTTTGTCCGGTGCTCCTGCCACTaGGTACACGGACTTATACAT +
Preference number: 4 (lower is better)
Translates to: GVDRSPNHFSSHTVDSFVRCSCH*VHGLIH
Trigger: ATGTATAAGTCCGTGTACCCAGTGGCAGGAGCACCG...GACAAAAGAGTCCACTGTGTGGCTGGAGAAATGGTTAGGAGACCTGTCTACTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000197927.2
CDS-3UTR CCA 90 bp GGAGTAGACAGGTCTCCTAACCATTTCTCCAGCCACACAGTGGACTCTTTTGTCCTGTGCAAGGAGAGCTaGACCAATCCATCCCAGGAA +
Preference number: 4 (lower is better)
Translates to: GVDRSPNHFSSHTVDSFVLCKES*TNPSQE
Trigger: TTCCTGGGATGGATTGGTCCAGCTCTCCTTGCACAG...GACAAAAGAGTCCACTGTGTGGCTGGAGAAATGGTTAGGAGACCTGTCTACTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000197927.2
CDS-3UTR TCA 90 bp AGCCTGGTCCACAAAGAGGGAACATGCCTTTCTAAATTCCCACGCCTGACTCCACTCATCTGTCATTACTaGAGCAAAAGGCTGCTGAGG +
Preference number: 4 (lower is better)
Translates to: SLVHKEGTCLSKFPRLTPLICHY*SKRLLR
Trigger: CCTCAGCAGCCTTTTGCTTCAGTAATGACAGATGAG...TGGAGTCAGGCGTGGGAATTTAGAAAGGCATGTTCCCTCTTTGTGGACCAGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030868.11
CDS-3UTR TCA 90 bp GGAGTAGACAGGTCTCCTAACCATTTCTCCAGCCACACAGTGGACTCTTTTGTCGAGCCAGTGGTGCTCTaGAATGTCAGTTCTGATGGA +
Preference number: 4 (lower is better)
Translates to: GVDRSPNHFSSHTVDSFVEPVVL*NVSSDG
Trigger: TCCATCAGAACTGACATTTCAGAGCACCACTGGCTC...GACAAAAGAGTCCACTGTGTGGCTGGAGAAATGGTTAGGAGACCTGTCTACTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000197927.2
CDS-3UTR TCA 90 bp GGAGTAGACAGGTCTCCTAACCATTTCTCCAGCCACACAGTGGACTCTTTTGTCTCTATGTCCCAGCACTaGGTGATTGGGTCCCCATAT +
Preference number: 4 (lower is better)
Translates to: GVDRSPNHFSSHTVDSFVSMSQH*VIGSPY
Trigger: ATATGGGGACCCAATCACTCAGTGCTGGGACATAGA...GACAAAAGAGTCCACTGTGTGGCTGGAGAAATGGTTAGGAGACCTGTCTACTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000197927.2
CDS-3UTR TCA 90 bp GGAGTAGACAGGTCTCCTAACCATTTCTCCAGCCACACAGTGGACTCTTTTGTCAGCTTGACTTCAGTTTaGCAGCAGCATCCTTGCTGG +
Preference number: 4 (lower is better)
Translates to: GVDRSPNHFSSHTVDSFVSLTSV*QQHPCW
Trigger: CCAGCAAGGATGCTGCTGTCAAACTGAAGTCAAGCT...GACAAAAGAGTCCACTGTGTGGCTGGAGAAATGGTTAGGAGACCTGTCTACTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000197927.2
CDS-3UTR GCA 90 bp GGAGTAGACAGGTCTCCTAACCATTTCTCCAGCCACACAGTGGACTCTTTTGTCCTCCTAGGAGCAGTATaGCCCTCTCCTCATCCAAAA +
Preference number: 4 (lower is better)
Translates to: GVDRSPNHFSSHTVDSFVLLGAV*PSPHPK
Trigger: TTTTGGATGAGGAGAGGGGCATACTGCTCCTAGGAG...GACAAAAGAGTCCACTGTGTGGCTGGAGAAATGGTTAGGAGACCTGTCTACTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000197927.2
CDS-3UTR GCA 90 bp GGAGTAGACAGGTCTCCTAACCATTTCTCCAGCCACACAGTGGACTCTTTTGTCGTGGGTCATAGGTTTTaGTTGGACACGTTCCAGGTC +
Preference number: 4 (lower is better)
Translates to: GVDRSPNHFSSHTVDSFVVGHRF*LDTFQV
Trigger: GACCTGGAACGTGTCCAAGCAAAACCTATGACCCAC...GACAAAAGAGTCCACTGTGTGGCTGGAGAAATGGTTAGGAGACCTGTCTACTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000197927.2
CDS-3UTR GCA 90 bp GGAGTAGACAGGTCTCCTAACCATTTCTCCAGCCACACAGTGGACTCTTTTGTCACAGCAGTCTGCACATaGTTTCCCGTAAGTGTCGCA +
Preference number: 4 (lower is better)
Translates to: GVDRSPNHFSSHTVDSFVTAVCT*FPVSVA
Trigger: TGCGACACTTACGGGAAAGCATGTGCAGACTGCTGT...GACAAAAGAGTCCACTGTGTGGCTGGAGAAATGGTTAGGAGACCTGTCTACTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000197927.2
CDS-3UTR CCA 90 bp GGAGTAGACAGGTCTCCTAACCATTTCTCCAGCCACACAGTGGACTCTTTTGTCACGTGGGTGCATATCTaGAGCAAGCATTTCCATCCC +
Preference number: 4 (lower is better)
Translates to: GVDRSPNHFSSHTVDSFVTWVHI*SKHFHP
Trigger: GGGATGGAAATGCTTGCTCCAGATATGCACCCACGT...GACAAAAGAGTCCACTGTGTGGCTGGAGAAATGGTTAGGAGACCTGTCTACTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000197927.2
CDS-3UTR CCA 90 bp GGAGTAGACAGGTCTCCTAACCATTTCTCCAGCCACACAGTGGACTCTTTTGTCTCATCTCCTGACCGCTaGATGTACCACTCAACAGAG +
Preference number: 4 (lower is better)
Translates to: GVDRSPNHFSSHTVDSFVSSPDR*MYHSTE
Trigger: CTCTGTTGAGTGGTACATCCAGCGGTCAGGAGATGA...GACAAAAGAGTCCACTGTGTGGCTGGAGAAATGGTTAGGAGACCTGTCTACTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000197927.2
CDS-3UTR TCA 90 bp AGCCTGGTCCACAAAGAGGGAACATGCCTTTCTAAATTCCCACGCCTGACTCCAGGGGATACAGGTGTTTaGAAGCAGCAAGTCTTTGTA +
Preference number: 4 (lower is better)
Translates to: SLVHKEGTCLSKFPRLTPGDTGV*KQQVFV
Trigger: TACAAAGACTTGCTGCTTTCAAACACCTGTATCCCC...TGGAGTCAGGCGTGGGAATTTAGAAAGGCATGTTCCCTCTTTGTGGACCAGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030868.11
CDS-3UTR TCA 90 bp GGAGTAGACAGGTCTCCTAACCATTTCTCCAGCCACACAGTGGACTCTTTTGTCCTCATCTGTCATTACTaGAGCAAAAGGCTGCTGAGG +
Preference number: 4 (lower is better)
Translates to: GVDRSPNHFSSHTVDSFVLICHY*SKRLLR
Trigger: CCTCAGCAGCCTTTTGCTTCAGTAATGACAGATGAG...GACAAAAGAGTCCACTGTGTGGCTGGAGAAATGGTTAGGAGACCTGTCTACTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000197927.2
CDS-3UTR TCA 90 bp GGAGTAGACAGGTCTCCTAACCATTTCTCCAGCCACACAGTGGACTCTTTTGTCCTGAAATGTCAGTTCTaGTGGAATGGTGGTCCTGCA +
Preference number: 4 (lower is better)
Translates to: GVDRSPNHFSSHTVDSFVLKCQF*WNGGPA
Trigger: TGCAGGACCACCATTCCATCAGAACTGACATTTCAG...GACAAAAGAGTCCACTGTGTGGCTGGAGAAATGGTTAGGAGACCTGTCTACTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000197927.2
CDS-3UTR TCA 90 bp GGAGTAGACAGGTCTCCTAACCATTTCTCCAGCCACACAGTGGACTCTTTTGTCTGTCCCAGCACTGAGTaGTTGGGTCCCCATATTTTA +
Preference number: 4 (lower is better)
Translates to: GVDRSPNHFSSHTVDSFVCPSTE*LGPHIL
Trigger: TAAAATATGGGGACCCAATCACTCAGTGCTGGGACA...GACAAAAGAGTCCACTGTGTGGCTGGAGAAATGGTTAGGAGACCTGTCTACTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000197927.2
CDS-3UTR GCA 90 bp GGAGTAGACAGGTCTCCTAACCATTTCTCCAGCCACACAGTGGACTCTTTTGTCCCATTGAGCCAGTGGTaGTCTGAAATGTCAGTTCTG +
Preference number: 4 (lower is better)
Translates to: GVDRSPNHFSSHTVDSFVPLSQW*SEMSVL
Trigger: CAGAACTGACATTTCAGAGCACCACTGGCTCAATGG...GACAAAAGAGTCCACTGTGTGGCTGGAGAAATGGTTAGGAGACCTGTCTACTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000197927.2
CDS-3UTR GCA 90 bp AGCCTGGTCCACAAAGAGGGAACATGCCTTTCTAAATTCCCACGCCTGACTCCACCAGAATCCTTCTTCTaGAGACTTCGAATCAGTAGC +
Preference number: 4 (lower is better)
Translates to: SLVHKEGTCLSKFPRLTPPESFF*RLRISS
Trigger: GCTACTGATTCGAAGTCTGCAGAAGAAGGATTCTGG...TGGAGTCAGGCGTGGGAATTTAGAAAGGCATGTTCCCTCTTTGTGGACCAGGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030868.11
CDS-3UTR GCA 90 bp TCTTTTACCATGCTTCCCAAAGAGCACAGGAAGTGTGTACTAAGTTCCATTGTCGCTTCCACTTTGGGCTaGCCTTGTTGCGCTGTCTCC +
Preference number: 4 (lower is better)
Translates to: SFTMLPKEHRKCVLSSIVASTLG*PCCAVS
Trigger: GGAGACAGCGCAACAAGGGCAGCCCAAAGTGGAAGC...GACAATGGAACTTAGTACACACTTCCTGTGCTCTTTGGGAAGCATGGTAAAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030868.11
CDS-3UTR TCA 90 bp GGAGTAGACAGGTCTCCTAACCATTTCTCCAGCCACACAGTGGACTCTTTTGTCGGGGATACAGGTGTTTaGAAGCAGCAAGTCTTTGTA +
Preference number: 4 (lower is better)
Translates to: GVDRSPNHFSSHTVDSFVGDTGV*KQQVFV
Trigger: TACAAAGACTTGCTGCTTTCAAACACCTGTATCCCC...GACAAAAGAGTCCACTGTGTGGCTGGAGAAATGGTTAGGAGACCTGTCTACTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000197927.2
CDS-3UTR TCA 90 bp CATCCATTCAACAAATATATAGCCCCACTCCCCACCTTGGTCATCTACTCAATTTCGATGCTCATCTCCTaGCCGCTGGATGTACCACTC +
Preference number: 4 (lower is better)
Translates to: HPFNKYIAPLPTLVIYSISMLIS*PLDVPL
Trigger: GAGTGGTACATCCAGCGGTCAGGAGATGAGCATCGA...AATTGAGTAGATGACCAAGGTGGGGAGTGGGGCTATATATTTGTTGAATGGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030868.11
CDS-3UTR TCA 90 bp TCTTTTACCATGCTTCCCAAAGAGCACAGGAAGTGTGTACTAAGTTCCATTGTCCAGCCAACAGATCCTTaGCCTGCCCCTCCTGGTATT +
Preference number: 4 (lower is better)
Translates to: SFTMLPKEHRKCVLSSIVQPTDP*PAPPGI
Trigger: AATACCAGGAGGGGCAGGTCAAGGATCTGTTGGCTG...GACAATGGAACTTAGTACACACTTCCTGTGCTCTTTGGGAAGCATGGTAAAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030868.11
CDS-3UTR GCA 90 bp AGCCTGGTCCACAAAGAGGGAACATGCCTTTCTAAATTCCCACGCCTGACTCCACTCCACTCGTTCTTTTaGAGCAGGCCAATAAATCTT +
Preference number: 4 (lower is better)
Translates to: SLVHKEGTCLSKFPRLTPLHSFF*SRPINL
Trigger: AAGATTTATTGGCCTGCTGCAAAAGAACGAGTGGAG...TGGAGTCAGGCGTGGGAATTTAGAAAGGCATGTTCCCTCTTTGTGGACCAGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030868.11
CDS-3UTR GCA 90 bp AGCCTGGTCCACAAAGAGGGAACATGCCTTTCTAAATTCCCACGCCTGACTCCACACACGGATGAAATTTaGACATTCTGCATTGGCATC +
Preference number: 4 (lower is better)
Translates to: SLVHKEGTCLSKFPRLTPHTDEI*TFCIGI
Trigger: GATGCCAATGCAGAATGTGCAAATTTCATCCGTGTG...TGGAGTCAGGCGTGGGAATTTAGAAAGGCATGTTCCCTCTTTGTGGACCAGGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030868.11
CDS-3UTR GCA 90 bp GGAGTAGACAGGTCTCCTAACCATTTCTCCAGCCACACAGTGGACTCTTTTGTCCAGAGACCTTGTGAATaGAGTGTCTTTGCCAAGGAA +
Preference number: 4 (lower is better)
Translates to: GVDRSPNHFSSHTVDSFVQRPCE*SVFAKE
Trigger: TTCCTTGGCAAAGACACTGCATTCACAAGGTCTCTG...GACAAAAGAGTCCACTGTGTGGCTGGAGAAATGGTTAGGAGACCTGTCTACTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000197927.2
CDS-3UTR GCA 90 bp GGAGTAGACAGGTCTCCTAACCATTTCTCCAGCCACACAGTGGACTCTTTTGTCATCAAAATGGGTATCTaGCCCATCGCTTCCAGGAAT +
Preference number: 4 (lower is better)
Translates to: GVDRSPNHFSSHTVDSFVIKMGI*PIASRN
Trigger: ATTCCTGGAAGCGATGGGGCAGATACCCATTTTGAT...GACAAAAGAGTCCACTGTGTGGCTGGAGAAATGGTTAGGAGACCTGTCTACTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000197927.2
CDS-3UTR CCA 90 bp GGAGTAGACAGGTCTCCTAACCATTTCTCCAGCCACACAGTGGACTCTTTTGTCGAAGTACTGCCTTCCTaGGATGATTCTCGAAAGAAG +
Preference number: 4 (lower is better)
Translates to: GVDRSPNHFSSHTVDSFVEVLPS*DDSRKK
Trigger: CTTCTTTCGAGAATCATCCCAGGAAGGCAGTACTTC...GACAAAAGAGTCCACTGTGTGGCTGGAGAAATGGTTAGGAGACCTGTCTACTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000197927.2
CDS-3UTR CCA 90 bp GGAGTAGACAGGTCTCCTAACCATTTCTCCAGCCACACAGTGGACTCTTTTGTCTGGAGTTCATCAAAATaGGTATCTGCCCCATCGCTT +
Preference number: 4 (lower is better)
Translates to: GVDRSPNHFSSHTVDSFVWSSSK*VSAPSL
Trigger: AAGCGATGGGGCAGATACCCATTTTGATGAACTCCA...GACAAAAGAGTCCACTGTGTGGCTGGAGAAATGGTTAGGAGACCTGTCTACTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000197927.2
CDS-3UTR CCA 90 bp GGAGTAGACAGGTCTCCTAACCATTTCTCCAGCCACACAGTGGACTCTTTTGTCGGTGGACTTAATCAGTaGGTCATAGGTTTTGCTTGG +
Preference number: 4 (lower is better)
Translates to: GVDRSPNHFSSHTVDSFVGGLNQ*VIGFAW
Trigger: CCAAGCAAAACCTATGACCCACTGATTAAGTCCACC...GACAAAAGAGTCCACTGTGTGGCTGGAGAAATGGTTAGGAGACCTGTCTACTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000197927.2
CDS-3UTR CCA 90 bp GGAGTAGACAGGTCTCCTAACCATTTCTCCAGCCACACAGTGGACTCTTTTGTCACTGATAACATCGTCTaGAAAGTCTCGGGTGGACTT +
Preference number: 4 (lower is better)
Translates to: GVDRSPNHFSSHTVDSFVTDNIV*KVSGGL
Trigger: AAGTCCACCCGAGACTTTCCAGACGATGTTATCAGT...GACAAAAGAGTCCACTGTGTGGCTGGAGAAATGGTTAGGAGACCTGTCTACTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000197927.2
CDS-3UTR CCA 90 bp GGAGTAGACAGGTCTCCTAACCATTTCTCCAGCCACACAGTGGACTCTTTTGTCCCAGCACTGAGTGATTaGGTCCCCATATTTTACATC +
Preference number: 4 (lower is better)
Translates to: GVDRSPNHFSSHTVDSFVPALSD*VPIFYI
Trigger: GATGTAAAATATGGGGACCCAATCACTCAGTGCTGG...GACAAAAGAGTCCACTGTGTGGCTGGAGAAATGGTTAGGAGACCTGTCTACTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000197927.2
CDS-3UTR TCA 90 bp CATCCATTCAACAAATATATAGCCCCACTCCCCACCTTGGTCATCTACTCAATTGCCCCAGAGACCTTGTaGATGCAGTGTCTTTGCCAA +
Preference number: 4 (lower is better)
Translates to: HPFNKYIAPLPTLVIYSIAPETL*MQCLCQ
Trigger: TTGGCAAAGACACTGCATTCACAAGGTCTCTGGGGC...AATTGAGTAGATGACCAAGGTGGGGAGTGGGGCTATATATTTGTTGAATGGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000030868.11
CDS-3UTR TCA 90 bp GGAGTAGACAGGTCTCCTAACCATTTCTCCAGCCACACAGTGGACTCTTTTGTCACTGCCTTCCTGGGATaGTTCTCGAAAGAAGAAATA +
Preference number: 4 (lower is better)
Translates to: GVDRSPNHFSSHTVDSFVTAFLG*FSKEEI
Trigger: TATTTCTTCTTTCGAGAATCATCCCAGGAAGGCAGT...GACAAAAGAGTCCACTGTGTGGCTGGAGAAATGGTTAGGAGACCTGTCTACTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000197927.2
CDS-3UTR TCA 90 bp TCTTTTACCATGCTTCCCAAAGAGCACAGGAAGTGTGTACTAAGTTCCATTGTCAGACAGCAGAGCCTTTaGAGATGGAGCTGGTTGTGG +
Preference number: 4 (lower is better)
Translates to: SFTMLPKEHRKCVLSSIVRQQSL*RWSWLW
Trigger: CCACAACCAGCTCCATCTTCAAAGGCTCTGCTGTCT...GACAATGGAACTTAGTACACACTTCCTGTGCTCTTTGGGAAGCATGGTAAAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030868.11
CDS-3UTR GCA 90 bp GGAGTAGACAGGTCTCCTAACCATTTCTCCAGCCACACAGTGGACTCTTTTGTCCTCCACTCGTTCTTTTaGAGCAGGCCAATAAATCTT +
Preference number: 4 (lower is better)
Translates to: GVDRSPNHFSSHTVDSFVLHSFF*SRPINL
Trigger: AAGATTTATTGGCCTGCTGCAAAAGAACGAGTGGAG...GACAAAAGAGTCCACTGTGTGGCTGGAGAAATGGTTAGGAGACCTGTCTACTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000197927.2
CDS-3UTR GCA 90 bp GGAGTAGACAGGTCTCCTAACCATTTCTCCAGCCACACAGTGGACTCTTTTGTCCCAGACTCCAGGTTGTaGGTGTCTAGTTTAAATATG +
Preference number: 4 (lower is better)
Translates to: GVDRSPNHFSSHTVDSFVPDSRL*VSSLNM
Trigger: CATATTTAAACTAGACACGCACAACCTGGAGTCTGG...GACAAAAGAGTCCACTGTGTGGCTGGAGAAATGGTTAGGAGACCTGTCTACTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000197927.2
CDS-3UTR GCA 90 bp GATAGATTGCTTGACTCTGTAAAACTGCTTTTTAATCACACAGGCTTCTCACAGTTGGGCTGCCCTTGTTaGGCTGTCTCCGCTTCTCCT +
Preference number: 4 (lower is better)
Translates to: DRLLDSVKLLFNHTGFSQLGCPC*AVSASP
Trigger: AGGAGAAGCGGAGACAGCGCAACAAGGGCAGCCCAA...CTGTGAGAAGCCTGTGTGATTAAAAAGCAGTTTTACAGAGTCAAGCAATCTATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000030868.11
CDS-3UTR CCA 90 bp GGAGTAGACAGGTCTCCTAACCATTTCTCCAGCCACACAGTGGACTCTTTTGTCGTTCAAGATAGCTGTTaGGTGCTTGAATACCTGAAG +
Preference number: 4 (lower is better)
Translates to: GVDRSPNHFSSHTVDSFVVQDSC*VLEYLK
Trigger: CTTCAGGTATTCAAGCACCCAACAGCTATCTTGAAC...GACAAAAGAGTCCACTGTGTGGCTGGAGAAATGGTTAGGAGACCTGTCTACTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000197927.2
CDS-3UTR CCA 90 bp GGAGTAGACAGGTCTCCTAACCATTTCTCCAGCCACACAGTGGACTCTTTTGTCCCATATTTTACATCCTaGCGTCTAGCTCGCCTTTTA +
Preference number: 4 (lower is better)
Translates to: GVDRSPNHFSSHTVDSFVPYFTS*RLARLL
Trigger: TAAAAGGCGAGCTAGACGCCAGGATGTAAAATATGG...GACAAAAGAGTCCACTGTGTGGCTGGAGAAATGGTTAGGAGACCTGTCTACTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000197927.2
CDS-3UTR CCA 90 bp GGAGTAGACAGGTCTCCTAACCATTTCTCCAGCCACACAGTGGACTCTTTTGTCTCAACAGAGGCTTGTTaGGATTTAGGTATACACTCC +
Preference number: 4 (lower is better)
Translates to: GVDRSPNHFSSHTVDSFVSTEAC*DLGIHS
Trigger: GGAGTGTATACCTAAATCCCAACAAGCCTCTGTTGA...GACAAAAGAGTCCACTGTGTGGCTGGAGAAATGGTTAGGAGACCTGTCTACTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000197927.2
CDS-3UTR TCA 90 bp GATAGATTGCTTGACTCTGTAAAACTGCTTTTTAATCACACAGGCTTCTCACAGTACCCACACAGCGGATaGAACGCTCCAGTTCCACAC +
Preference number: 4 (lower is better)
Translates to: DRLLDSVKLLFNHTGFSQYPHSG*NAPVPH
Trigger: GTGTGGAACTGGAGCGTTTCATCCGCTGTGTGGGTA...CTGTGAGAAGCCTGTGTGATTAAAAAGCAGTTTTACAGAGTCAAGCAATCTATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000030868.11
CDS-3UTR TCA 90 bp CATCCATTCAACAAATATATAGCCCCACTCCCCACCTTGGTCATCTACTCAATTGAGCCAGTGGTGCTCTaGAATGTCAGTTCTGATGGA +
Preference number: 4 (lower is better)
Translates to: HPFNKYIAPLPTLVIYSIEPVVL*NVSSDG
Trigger: TCCATCAGAACTGACATTTCAGAGCACCACTGGCTC...AATTGAGTAGATGACCAAGGTGGGGAGTGGGGCTATATATTTGTTGAATGGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030868.11
CDS-3UTR TCA 90 bp GGAGTAGACAGGTCTCCTAACCATTTCTCCAGCCACACAGTGGACTCTTTTGTCAACTCTTCCAACTCTTaGAAGAATGCTTCTGTCAGA +
Preference number: 4 (lower is better)
Translates to: GVDRSPNHFSSHTVDSFVNSSNS*KNASVR
Trigger: TCTGACAGAAGCATTCTTTCAAGAGTTGGAAGAGTT...GACAAAAGAGTCCACTGTGTGGCTGGAGAAATGGTTAGGAGACCTGTCTACTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000197927.2
CDS-3UTR TCA 90 bp TCTTTTACCATGCTTCCCAAAGAGCACAGGAAGTGTGTACTAAGTTCCATTGTCTCTATGTCCCAGCACTaGGTGATTGGGTCCCCATAT +
Preference number: 4 (lower is better)
Translates to: SFTMLPKEHRKCVLSSIVSMSQH*VIGSPY
Trigger: ATATGGGGACCCAATCACTCAGTGCTGGGACATAGA...GACAATGGAACTTAGTACACACTTCCTGTGCTCTTTGGGAAGCATGGTAAAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030868.11
CDS-3UTR GCA 90 bp GGAGTAGACAGGTCTCCTAACCATTTCTCCAGCCACACAGTGGACTCTTTTGTCCAACTCTTGAAAGAATaGTTCTGTCAGAAGTACTGC +
Preference number: 4 (lower is better)
Translates to: GVDRSPNHFSSHTVDSFVQLLKE*FCQKYC
Trigger: GCAGTACTTCTGACAGAAGCATTCTTTCAAGAGTTG...GACAAAAGAGTCCACTGTGTGGCTGGAGAAATGGTTAGGAGACCTGTCTACTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000197927.2
CDS-3UTR GCA 90 bp GGAGTAGACAGGTCTCCTAACCATTTCTCCAGCCACACAGTGGACTCTTTTGTCTTATACATCACAGGGTaGCGCCTTATGAAACTGATA +
Preference number: 4 (lower is better)
Translates to: GVDRSPNHFSSHTVDSFVLYITG*RLMKLI
Trigger: TATCAGTTTCATAAGGCGGCACCCTGTGATGTATAA...GACAAAAGAGTCCACTGTGTGGCTGGAGAAATGGTTAGGAGACCTGTCTACTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000197927.2
CDS-3UTR GCA 90 bp CATCCATTCAACAAATATATAGCCCCACTCCCCACCTTGGTCATCTACTCAATTTCCTTGTACCACATCTaGTCACAGTACTGGTCCAGG +
Preference number: 4 (lower is better)
Translates to: HPFNKYIAPLPTLVIYSISLYHI*SQYWSR
Trigger: CCTGGACCAGTACTGTGAGCAGATGTGGTACAAGGA...AATTGAGTAGATGACCAAGGTGGGGAGTGGGGCTATATATTTGTTGAATGGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030868.11
CDS-3UTR GCA 90 bp CATCCATTCAACAAATATATAGCCCCACTCCCCACCTTGGTCATCTACTCAATTTTCATTTCCTGCATGTaGTTCCACTTTGGGCTGCCC +
Preference number: 4 (lower is better)
Translates to: HPFNKYIAPLPTLVIYSIFISCM*FHFGLP
Trigger: GGGCAGCCCAAAGTGGAAGCACATGCAGGAAATGAA...AATTGAGTAGATGACCAAGGTGGGGAGTGGGGCTATATATTTGTTGAATGGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000030868.11
CDS-3UTR CCA 90 bp GGAGTAGACAGGTCTCCTAACCATTTCTCCAGCCACACAGTGGACTCTTTTGTCGAAGATCTTGACTTCTaGATCTTGGGTTCTCATCTT +
Preference number: 4 (lower is better)
Translates to: GVDRSPNHFSSHTVDSFVEDLDF*ILGSHL
Trigger: AAGATGAGAACCCAAGATCCAGAAGTCAAGATCTTC...GACAAAAGAGTCCACTGTGTGGCTGGAGAAATGGTTAGGAGACCTGTCTACTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000197927.2
CDS-3UTR CCA 90 bp GGAGTAGACAGGTCTCCTAACCATTTCTCCAGCCACACAGTGGACTCTTTTGTCTTGCACATTCTGCATTaGCATCTTTCCCAGCTAATT +
Preference number: 4 (lower is better)
Translates to: GVDRSPNHFSSHTVDSFVLHILH*HLSQLI
Trigger: AATTAGCTGGGAAAGATGCCAATGCAGAATGTGCAA...GACAAAAGAGTCCACTGTGTGGCTGGAGAAATGGTTAGGAGACCTGTCTACTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000197927.2
CDS-3UTR CCA 90 bp GGAGTAGACAGGTCTCCTAACCATTTCTCCAGCCACACAGTGGACTCTTTTGTCTATTCCACTTCTCCTTaGAGATGCTCACAACTTTCA +
Preference number: 4 (lower is better)
Translates to: GVDRSPNHFSSHTVDSFVYSTSP*RCSQLS
Trigger: TGAAAGTTGTGAGCATCTCCAAGGAGAAGTGGAATA...GACAAAAGAGTCCACTGTGTGGCTGGAGAAATGGTTAGGAGACCTGTCTACTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000197927.2
CDS-3UTR CCA 90 bp TCTTTTACCATGCTTCCCAAAGAGCACAGGAAGTGTGTACTAAGTTCCATTGTCACGTGGGTGCATATCTaGAGCAAGCATTTCCATCCC +
Preference number: 4 (lower is better)
Translates to: SFTMLPKEHRKCVLSSIVTWVHI*SKHFHP
Trigger: GGGATGGAAATGCTTGCTCCAGATATGCACCCACGT...GACAATGGAACTTAGTACACACTTCCTGTGCTCTTTGGGAAGCATGGTAAAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030868.11
CDS-3UTR CCA 90 bp CATCCATTCAACAAATATATAGCCCCACTCCCCACCTTGGTCATCTACTCAATTTCATCTCCTGACCGCTaGATGTACCACTCAACAGAG +
Preference number: 4 (lower is better)
Translates to: HPFNKYIAPLPTLVIYSISSPDR*MYHSTE
Trigger: CTCTGTTGAGTGGTACATCCAGCGGTCAGGAGATGA...AATTGAGTAGATGACCAAGGTGGGGAGTGGGGCTATATATTTGTTGAATGGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030868.11
3UTR CAA 72 bp AGAGCACACCATGGGGTTCTGTCCATGATGCTGTGCTaGAGCAATCAAAAGGAAATTGGTGAGGATCATTAC +
Preference number: 4 (lower is better)
Translates to: RAHHGVLSMMLC*SNQKEIGEDHY
Trigger: GTAATGATCCTCACCAATTTCCTTTTGATTGCTCAAGCACAGCATCATGGACAGAACCCCATGGTGTGCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030868.11
CDS-3UTR TCA 90 bp CATCCATTCAACAAATATATAGCCCCACTCCCCACCTTGGTCATCTACTCAATTTCACTATGGTGTGGATaGAAGTGTGCTCCTGTGCTT +
Preference number: 4 (lower is better)
Translates to: HPFNKYIAPLPTLVIYSISLWCG*KCAPVL
Trigger: AAGCACAGGAGCACACTTTCATCCACACCATAGTGA...AATTGAGTAGATGACCAAGGTGGGGAGTGGGGCTATATATTTGTTGAATGGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030868.11
CDS-3UTR GCA 90 bp GACTTCCTTGTGAAACTGCTGAAAACAACACTGCTTGAAAGTTTATGTAACGAGAGGGACATTTCAGTCTaGCAGACTCCAGGTTGTGCG +
Preference number: 4 (lower is better)
Translates to: DFLVKLLKTTLLESLCNERDISV*QTPGCA
Trigger: CGCACAACCTGGAGTCTGGCAGACTGAAATGTCCCT...CTCGTTACATAAACTTTCAAGCAGTGTTGTTTTCAGCAGTTTCACAAGGAAGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030868.11
CDS-3UTR GCA 90 bp GGAGTAGACAGGTCTCCTAACCATTTCTCCAGCCACACAGTGGACTCTTTTGTCTTTATCAGACTTCGTTaGCCACCTACATCATTCTTA +
Preference number: 4 (lower is better)
Translates to: GVDRSPNHFSSHTVDSFVFIRLR*PPTSFL
Trigger: TAAGAATGATGTAGGTGGGCAACGAAGTCTGATAAA...GACAAAAGAGTCCACTGTGTGGCTGGAGAAATGGTTAGGAGACCTGTCTACTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000197927.2
CDS-3UTR GCA 90 bp GATAGATTGCTTGACTCTGTAAAACTGCTTTTTAATCACACAGGCTTCTCACAGTTCAACTCCTCTCGATaGTCATCTCCTGACCGCTGG +
Preference number: 4 (lower is better)
Translates to: DRLLDSVKLLFNHTGFSQFNSSR*SSPDRW
Trigger: CCAGCGGTCAGGAGATGAGCATCGAGAGGAGTTGAA...CTGTGAGAAGCCTGTGTGATTAAAAAGCAGTTTTACAGAGTCAAGCAATCTATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000030868.11
CDS-3UTR CCA 90 bp GGAGTAGACAGGTCTCCTAACCATTTCTCCAGCCACACAGTGGACTCTTTTGTCTTGACTTCTGGATCTTaGGTTCTCATCTTTAGTAAC +
Preference number: 4 (lower is better)
Translates to: GVDRSPNHFSSHTVDSFVLTSGS*VLIFSN
Trigger: GTTACTAAAGATGAGAACCCAAGATCCAGAAGTCAA...GACAAAAGAGTCCACTGTGTGGCTGGAGAAATGGTTAGGAGACCTGTCTACTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000197927.2
CDS-3UTR CCA 90 bp GACTTCCTTGTGAAACTGCTGAAAACAACACTGCTTGAAAGTTTATGTAACGAGCTGAGCAGGAAGACATaGTCTTTGGCTCCTAGGAGC +
Preference number: 4 (lower is better)
Translates to: DFLVKLLKTTLLESLCNELSRKT*SLAPRS
Trigger: GCTCCTAGGAGCCAAAGACCATGTCTTCCTGCTCAG...CTCGTTACATAAACTTTCAAGCAGTGTTGTTTTCAGCAGTTTCACAAGGAAGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030868.11
CDS-3UTR CCA 90 bp GATAGATTGCTTGACTCTGTAAAACTGCTTTTTAATCACACAGGCTTCTCACAGCGGTGCTCCTGCCACTaGGTACACGGACTTATACAT +
Preference number: 4 (lower is better)
Translates to: DRLLDSVKLLFNHTGFSQRCSCH*VHGLIH
Trigger: ATGTATAAGTCCGTGTACCCAGTGGCAGGAGCACCG...CTGTGAGAAGCCTGTGTGATTAAAAAGCAGTTTTACAGAGTCAAGCAATCTATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000030868.11
CDS-3UTR CCA 90 bp GACTTCCTTGTGAAACTGCTGAAAACAACACTGCTTGAAAGTTTATGTAACGAGCTGTGCAAGGAGAGCTaGACCAATCCATCCCAGGAA +
Preference number: 4 (lower is better)
Translates to: DFLVKLLKTTLLESLCNELCKES*TNPSQE
Trigger: TTCCTGGGATGGATTGGTCCAGCTCTCCTTGCACAG...CTCGTTACATAAACTTTCAAGCAGTGTTGTTTTCAGCAGTTTCACAAGGAAGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030868.11
CDS-3UTR TCA 90 bp CATCCATTCAACAAATATATAGCCCCACTCCCCACCTTGGTCATCTACTCAATTTTTGTATCTCAACCGTaGCTCAGCCAACAGATCCTT +
Preference number: 4 (lower is better)
Translates to: HPFNKYIAPLPTLVIYSIFVSQP*LSQQIL
Trigger: AAGGATCTGTTGGCTGAGTCACGGTTGAGATACAAA...AATTGAGTAGATGACCAAGGTGGGGAGTGGGGCTATATATTTGTTGAATGGATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000030868.11
CDS-3UTR GCA 90 bp CATCCATTCAACAAATATATAGCCCCACTCCCCACCTTGGTCATCTACTCAATTATCAAAATGGGTATCTaGCCCATCGCTTCCAGGAAT +
Preference number: 4 (lower is better)
Translates to: HPFNKYIAPLPTLVIYSIIKMGI*PIASRN
Trigger: ATTCCTGGAAGCGATGGGGCAGATACCCATTTTGAT...AATTGAGTAGATGACCAAGGTGGGGAGTGGGGCTATATATTTGTTGAATGGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000030868.11
CDS-3UTR GCA 90 bp GATAGATTGCTTGACTCTGTAAAACTGCTTTTTAATCACACAGGCTTCTCACAGACAGCAGTCTGCACATaGTTTCCCGTAAGTGTCGCA +
Preference number: 4 (lower is better)
Translates to: DRLLDSVKLLFNHTGFSQTAVCT*FPVSVA
Trigger: TGCGACACTTACGGGAAAGCATGTGCAGACTGCTGT...CTGTGAGAAGCCTGTGTGATTAAAAAGCAGTTTTACAGAGTCAAGCAATCTATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000030868.11
CDS-3UTR CCA 90 bp TCTTTTACCATGCTTCCCAAAGAGCACAGGAAGTGTGTACTAAGTTCCATTGTCTGGAGTTCATCAAAATaGGTATCTGCCCCATCGCTT +
Preference number: 4 (lower is better)
Translates to: SFTMLPKEHRKCVLSSIVWSSSK*VSAPSL
Trigger: AAGCGATGGGGCAGATACCCATTTTGATGAACTCCA...GACAATGGAACTTAGTACACACTTCCTGTGCTCTTTGGGAAGCATGGTAAAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000030868.11
CDS-3UTR CCA 90 bp TCTTTTACCATGCTTCCCAAAGAGCACAGGAAGTGTGTACTAAGTTCCATTGTCACTGATAACATCGTCTaGAAAGTCTCGGGTGGACTT +
Preference number: 4 (lower is better)
Translates to: SFTMLPKEHRKCVLSSIVTDNIV*KVSGGL
Trigger: AAGTCCACCCGAGACTTTCCAGACGATGTTATCAGT...GACAATGGAACTTAGTACACACTTCCTGTGCTCTTTGGGAAGCATGGTAAAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030868.11
CDS-3UTR CCA 90 bp CATCCATTCAACAAATATATAGCCCCACTCCCCACCTTGGTCATCTACTCAATTAGCTTCACTATGGTGTaGATGAAAGTGTGCTCCTGT +
Preference number: 4 (lower is better)
Translates to: HPFNKYIAPLPTLVIYSISFTMV*MKVCSC
Trigger: ACAGGAGCACACTTTCATCCACACCATAGTGAAGCT...AATTGAGTAGATGACCAAGGTGGGGAGTGGGGCTATATATTTGTTGAATGGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030868.11
CDS-3UTR CCA 90 bp ATAAGGGATGTACAAAACAGAAGACATTATTTGTGCAGGCAGGTAAATAATTCCTTGACCTGCCCCTCCTaGTATTCTGCCCTCTGGGTA +
Preference number: 4 (lower is better)
Translates to: IRDVQNRRHYLCRQVNNSLTCPS*YSALWV
Trigger: TACCCAGAGGGCAGAATACCAGGAGGGGCAGGTCAA...GGAATTATTTACCTGCCTGCACAAATAATGTCTTCTGTTTTGTACATCCCTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030868.11
CDS-3UTR CCA 90 bp GATAGATTGCTTGACTCTGTAAAACTGCTTTTTAATCACACAGGCTTCTCACAGGTAGCTACTGATCTCTaGAGCTCATCGAGGTCTCTG +
Preference number: 4 (lower is better)
Translates to: DRLLDSVKLLFNHTGFSQVATDL*SSSRSL
Trigger: CAGAGACCTCGATGAGCTCCAGAGATCAGTAGCTAC...CTGTGAGAAGCCTGTGTGATTAAAAAGCAGTTTTACAGAGTCAAGCAATCTATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000030868.11
CDS-3UTR TCA 90 bp GACTTCCTTGTGAAACTGCTGAAAACAACACTGCTTGAAAGTTTATGTAACGAGGAAGCAAAAGGCTGCTaGGGATCAAAGGGACATTTC +
Preference number: 4 (lower is better)
Translates to: DFLVKLLKTTLLESLCNEEAKGC*GSKGHF
Trigger: GAAATGTCCCTTTGATCCTCAGCAGCCTTTTGCTTC...CTCGTTACATAAACTTTCAAGCAGTGTTGTTTTCAGCAGTTTCACAAGGAAGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030868.11
CDS-3UTR TCA 90 bp GACTTCCTTGTGAAACTGCTGAAAACAACACTGCTTGAAAGTTTATGTAACGAGCTGAAATGTCAGTTCTaGTGGAATGGTGGTCCTGCA +
Preference number: 4 (lower is better)
Translates to: DFLVKLLKTTLLESLCNELKCQF*WNGGPA
Trigger: TGCAGGACCACCATTCCATCAGAACTGACATTTCAG...CTCGTTACATAAACTTTCAAGCAGTGTTGTTTTCAGCAGTTTCACAAGGAAGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030868.11
CDS-3UTR TCA 90 bp TCTTTTACCATGCTTCCCAAAGAGCACAGGAAGTGTGTACTAAGTTCCATTGTCACTGCCTTCCTGGGATaGTTCTCGAAAGAAGAAATA +
Preference number: 4 (lower is better)
Translates to: SFTMLPKEHRKCVLSSIVTAFLG*FSKEEI
Trigger: TATTTCTTCTTTCGAGAATCATCCCAGGAAGGCAGT...GACAATGGAACTTAGTACACACTTCCTGTGCTCTTTGGGAAGCATGGTAAAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030868.11
CDS-3UTR TCA 90 bp GACTTCCTTGTGAAACTGCTGAAAACAACACTGCTTGAAAGTTTATGTAACGAGTGTCCCAGCACTGAGTaGTTGGGTCCCCATATTTTA +
Preference number: 4 (lower is better)
Translates to: DFLVKLLKTTLLESLCNECPSTE*LGPHIL
Trigger: TAAAATATGGGGACCCAATCACTCAGTGCTGGGACA...CTCGTTACATAAACTTTCAAGCAGTGTTGTTTTCAGCAGTTTCACAAGGAAGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000030868.11
CDS-3UTR GCA 90 bp GACTTCCTTGTGAAACTGCTGAAAACAACACTGCTTGAAAGTTTATGTAACGAGCCATTGAGCCAGTGGTaGTCTGAAATGTCAGTTCTG +
Preference number: 4 (lower is better)
Translates to: DFLVKLLKTTLLESLCNEPLSQW*SEMSVL
Trigger: CAGAACTGACATTTCAGAGCACCACTGGCTCAATGG...CTCGTTACATAAACTTTCAAGCAGTGTTGTTTTCAGCAGTTTCACAAGGAAGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030868.11
CDS-3UTR GCA 90 bp TCTTTTACCATGCTTCCCAAAGAGCACAGGAAGTGTGTACTAAGTTCCATTGTCTGTGCTCCTGTGCTTTaGAGTAATACATCCCAGAAT +
Preference number: 4 (lower is better)
Translates to: SFTMLPKEHRKCVLSSIVCAPVL*SNTSQN
Trigger: ATTCTGGGATGTATTACTGCAAAGCACAGGAGCACA...GACAATGGAACTTAGTACACACTTCCTGTGCTCTTTGGGAAGCATGGTAAAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030868.11
CDS-3UTR GCA 90 bp ATAAGGGATGTACAAAACAGAAGACATTATTTGTGCAGGCAGGTAAATAATTCCAACAGATCCTTGACCTaGCCCTCCTGGTATTCTGCC +
Preference number: 4 (lower is better)
Translates to: IRDVQNRRHYLCRQVNNSNRSLT*PSWYSA
Trigger: GGCAGAATACCAGGAGGGGCAGGTCAAGGATCTGTT...GGAATTATTTACCTGCCTGCACAAATAATGTCTTCTGTTTTGTACATCCCTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030868.11
CDS-3UTR CCA 90 bp ATAAGGGATGTACAAAACAGAAGACATTATTTGTGCAGGCAGGTAAATAATTCCGTCATAGGTTTTGCTTaGACACGTTCCAGGTCGGGG +
Preference number: 4 (lower is better)
Translates to: IRDVQNRRHYLCRQVNNSVIGFA*TRSRSG
Trigger: CCCCGACCTGGAACGTGTCCAAGCAAAACCTATGAC...GGAATTATTTACCTGCCTGCACAAATAATGTCTTCTGTTTTGTACATCCCTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030868.11
3UTR CAA 72 bp AAACAAATCATCCTGGAATTGTGCATCCGAGAGCTATaGTGGATTCTGCAGTGTGCTCAGTTTTTCTATGAC +
Preference number: 4 (lower is better)
Translates to: KQIILELCIREL*WILQCAQFFYD
Trigger: GTCATAGAAAAACTGAGCACACTGCAGAATCCACAATAGCTCTCGGATGCACAATTCCAGGATGATTTGTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000030868.11
CDS-3UTR TCA 90 bp TCTTTTACCATGCTTCCCAAAGAGCACAGGAAGTGTGTACTAAGTTCCATTGTCAACTCTTCCAACTCTTaGAAGAATGCTTCTGTCAGA +
Preference number: 4 (lower is better)
Translates to: SFTMLPKEHRKCVLSSIVNSSNS*KNASVR
Trigger: TCTGACAGAAGCATTCTTTCAAGAGTTGGAAGAGTT...GACAATGGAACTTAGTACACACTTCCTGTGCTCTTTGGGAAGCATGGTAAAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030868.11
CDS-3UTR GCA 90 bp GACTTCCTTGTGAAACTGCTGAAAACAACACTGCTTGAAAGTTTATGTAACGAGCAGAGACCTTGTGAATaGAGTGTCTTTGCCAAGGAA +
Preference number: 4 (lower is better)
Translates to: DFLVKLLKTTLLESLCNEQRPCE*SVFAKE
Trigger: TTCCTTGGCAAAGACACTGCATTCACAAGGTCTCTG...CTCGTTACATAAACTTTCAAGCAGTGTTGTTTTCAGCAGTTTCACAAGGAAGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030868.11
CDS-3UTR GCA 90 bp ATAAGGGATGTACAAAACAGAAGACATTATTTGTGCAGGCAGGTAAATAATTCCGTGGGTCATAGGTTTTaGTTGGACACGTTCCAGGTC +
Preference number: 4 (lower is better)
Translates to: IRDVQNRRHYLCRQVNNSVGHRF*LDTFQV
Trigger: GACCTGGAACGTGTCCAAGCAAAACCTATGACCCAC...GGAATTATTTACCTGCCTGCACAAATAATGTCTTCTGTTTTGTACATCCCTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030868.11
CDS-3UTR GCA 90 bp CATCCATTCAACAAATATATAGCCCCACTCCCCACCTTGGTCATCTACTCAATTTTATACATCACAGGGTaGCGCCTTATGAAACTGATA +
Preference number: 4 (lower is better)
Translates to: HPFNKYIAPLPTLVIYSILYITG*RLMKLI
Trigger: TATCAGTTTCATAAGGCGGCACCCTGTGATGTATAA...AATTGAGTAGATGACCAAGGTGGGGAGTGGGGCTATATATTTGTTGAATGGATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000030868.11
CDS-3UTR CCA 90 bp CATCCATTCAACAAATATATAGCCCCACTCCCCACCTTGGTCATCTACTCAATTTTGCACATTCTGCATTaGCATCTTTCCCAGCTAATT +
Preference number: 4 (lower is better)
Translates to: HPFNKYIAPLPTLVIYSILHILH*HLSQLI
Trigger: AATTAGCTGGGAAAGATGCCAATGCAGAATGTGCAA...AATTGAGTAGATGACCAAGGTGGGGAGTGGGGCTATATATTTGTTGAATGGATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000030868.11
CDS-3UTR TCA 90 bp CATCCATTCAACAAATATATAGCCCCACTCCCCACCTTGGTCATCTACTCAATTTCTGTTCATTCTCAATaGCATTCAAAGTCAGCTTCA +
Preference number: 4 (lower is better)
Translates to: HPFNKYIAPLPTLVIYSISVHSQ*HSKSAS
Trigger: TGAAGCTGACTTTGAATGTCATTGAGAATGAACAGA...AATTGAGTAGATGACCAAGGTGGGGAGTGGGGCTATATATTTGTTGAATGGATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030868.11
CDS-3UTR TCA 90 bp ATAAGGGATGTACAAAACAGAAGACATTATTTGTGCAGGCAGGTAAATAATTCCTCATCGAGGTCTCTGTaGTGTCGTCGATTTCGTTTC +
Preference number: 4 (lower is better)
Translates to: IRDVQNRRHYLCRQVNNSSSRSL*CRRFRF
Trigger: GAAACGAAATCGACGACATCACAGAGACCTCGATGA...GGAATTATTTACCTGCCTGCACAAATAATGTCTTCTGTTTTGTACATCCCTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030868.11
CDS-3UTR GCA 90 bp GATAGATTGCTTGACTCTGTAAAACTGCTTTTTAATCACACAGGCTTCTCACAGCCAGACTCCAGGTTGTaGGTGTCTAGTTTAAATATG +
Preference number: 4 (lower is better)
Translates to: DRLLDSVKLLFNHTGFSQPDSRL*VSSLNM
Trigger: CATATTTAAACTAGACACGCACAACCTGGAGTCTGG...CTGTGAGAAGCCTGTGTGATTAAAAAGCAGTTTTACAGAGTCAAGCAATCTATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000030868.11
CDS-3UTR CCA 90 bp GATAGATTGCTTGACTCTGTAAAACTGCTTTTTAATCACACAGGCTTCTCACAGCCATATTTTACATCCTaGCGTCTAGCTCGCCTTTTA +
Preference number: 4 (lower is better)
Translates to: DRLLDSVKLLFNHTGFSQPYFTS*RLARLL
Trigger: TAAAAGGCGAGCTAGACGCCAGGATGTAAAATATGG...CTGTGAGAAGCCTGTGTGATTAAAAAGCAGTTTTACAGAGTCAAGCAATCTATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENSMUST00000030868.11
CDS-3UTR CCA 90 bp GACTTCCTTGTGAAACTGCTGAAAACAACACTGCTTGAAAGTTTATGTAACGAGTCAACAGAGGCTTGTTaGGATTTAGGTATACACTCC +
Preference number: 4 (lower is better)
Translates to: DFLVKLLKTTLLESLCNESTEAC*DLGIHS
Trigger: GGAGTGTATACCTAAATCCCAACAAGCCTCTGTTGA...CTCGTTACATAAACTTTCAAGCAGTGTTGTTTTCAGCAGTTTCACAAGGAAGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030868.11
3UTR CAA 72 bp GTAAGTAAGTCTTGCTTTAAACAAATCATCCTGGAATaGTGCATCCGAGAGCTATTGTGGATTCTGCAGTGT +
Preference number: 4 (lower is better)
Translates to: VSKSCFKQIILE*CIRELLWILQC
Trigger: ACACTGCAGAATCCACAATAGCTCTCGGATGCACAATTCCAGGATGATTTGTTTAAAGCAAGACTTACTTAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030868.11
CDS-3UTR GCA 90 bp GACTTCCTTGTGAAACTGCTGAAAACAACACTGCTTGAAAGTTTATGTAACGAGCAACTCTTGAAAGAATaGTTCTGTCAGAAGTACTGC +
Preference number: 4 (lower is better)
Translates to: DFLVKLLKTTLLESLCNEQLLKE*FCQKYC
Trigger: GCAGTACTTCTGACAGAAGCATTCTTTCAAGAGTTG...CTCGTTACATAAACTTTCAAGCAGTGTTGTTTTCAGCAGTTTCACAAGGAAGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030868.11
CDS-3UTR GCA 90 bp ATAAGGGATGTACAAAACAGAAGACATTATTTGTGCAGGCAGGTAAATAATTCCGAAAGTGTGCTCCTGTaGTTTGCAGTAATACATCCC +
Preference number: 4 (lower is better)
Translates to: IRDVQNRRHYLCRQVNNSESVLL*FAVIHP
Trigger: GGGATGTATTACTGCAAAGCACAGGAGCACACTTTC...GGAATTATTTACCTGCCTGCACAAATAATGTCTTCTGTTTTGTACATCCCTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030868.11
CDS-3UTR CCA 90 bp GATAGATTGCTTGACTCTGTAAAACTGCTTTTTAATCACACAGGCTTCTCACAGGAAGATCTTGACTTCTaGATCTTGGGTTCTCATCTT +
Preference number: 4 (lower is better)
Translates to: DRLLDSVKLLFNHTGFSQEDLDF*ILGSHL
Trigger: AAGATGAGAACCCAAGATCCAGAAGTCAAGATCTTC...CTGTGAGAAGCCTGTGTGATTAAAAAGCAGTTTTACAGAGTCAAGCAATCTATC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000030868.11
CDS-3UTR CCA 90 bp ATAAGGGATGTACAAAACAGAAGACATTATTTGTGCAGGCAGGTAAATAATTCCGAAGTACTGCCTTCCTaGGATGATTCTCGAAAGAAG +
Preference number: 4 (lower is better)
Translates to: IRDVQNRRHYLCRQVNNSEVLPS*DDSRKK
Trigger: CTTCTTTCGAGAATCATCCCAGGAAGGCAGTACTTC...GGAATTATTTACCTGCCTGCACAAATAATGTCTTCTGTTTTGTACATCCCTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030868.11
CDS-3UTR CCA 90 bp ATAAGGGATGTACAAAACAGAAGACATTATTTGTGCAGGCAGGTAAATAATTCCGGTGGACTTAATCAGTaGGTCATAGGTTTTGCTTGG +
Preference number: 4 (lower is better)
Translates to: IRDVQNRRHYLCRQVNNSGGLNQ*VIGFAW
Trigger: CCAAGCAAAACCTATGACCCACTGATTAAGTCCACC...GGAATTATTTACCTGCCTGCACAAATAATGTCTTCTGTTTTGTACATCCCTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030868.11
CDS-3UTR CCA 90 bp GACTTCCTTGTGAAACTGCTGAAAACAACACTGCTTGAAAGTTTATGTAACGAGTATTCCACTTCTCCTTaGAGATGCTCACAACTTTCA +
Preference number: 4 (lower is better)
Translates to: DFLVKLLKTTLLESLCNEYSTSP*RCSQLS
Trigger: TGAAAGTTGTGAGCATCTCCAAGGAGAAGTGGAATA...CTCGTTACATAAACTTTCAAGCAGTGTTGTTTTCAGCAGTTTCACAAGGAAGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030868.11
CDS-3UTR CCA 90 bp ATAAGGGATGTACAAAACAGAAGACATTATTTGTGCAGGCAGGTAAATAATTCCCCAGCACTGAGTGATTaGGTCCCCATATTTTACATC +
Preference number: 4 (lower is better)
Translates to: IRDVQNRRHYLCRQVNNSPALSD*VPIFYI
Trigger: GATGTAAAATATGGGGACCCAATCACTCAGTGCTGG...GGAATTATTTACCTGCCTGCACAAATAATGTCTTCTGTTTTGTACATCCCTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000030868.11
3UTR CAA 72 bp CTGGCAGGAAAACACTGTTCAAAGGCAAAGTTGAATTaGACACAGGCTAGCAAAATACAAATGGTACTTATG +
Preference number: 4 (lower is better)
Translates to: LAGKHCSKAKLN*TQASKIQMVLM
Trigger: CATAAGTACCATTTGTATTTTGCTAGCCTGTGTCAAATTCAACTTTGCCTTTGAACAGTGTTTTCCTGCCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030868.11
CDS-3UTR GCA 90 bp GATAGATTGCTTGACTCTGTAAAACTGCTTTTTAATCACACAGGCTTCTCACAGTTTATCAGACTTCGTTaGCCACCTACATCATTCTTA +
Preference number: 4 (lower is better)
Translates to: DRLLDSVKLLFNHTGFSQFIRLR*PPTSFL
Trigger: TAAGAATGATGTAGGTGGGCAACGAAGTCTGATAAA...CTGTGAGAAGCCTGTGTGATTAAAAAGCAGTTTTACAGAGTCAAGCAATCTATC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000030868.11
CDS-3UTR CCA 90 bp GATAGATTGCTTGACTCTGTAAAACTGCTTTTTAATCACACAGGCTTCTCACAGTCCAAAAGAAGAGTCTaGAAATCCAATCCTTCTGAT +
Preference number: 4 (lower is better)
Translates to: DRLLDSVKLLFNHTGFSQSKRRV*KSNPSD
Trigger: ATCAGAAGGATTGGATTTCCAGACTCTTCTTTTGGA...CTGTGAGAAGCCTGTGTGATTAAAAAGCAGTTTTACAGAGTCAAGCAATCTATC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000030868.11
CDS-3UTR CCA 90 bp ATAAGGGATGTACAAAACAGAAGACATTATTTGTGCAGGCAGGTAAATAATTCCGTTCAAGATAGCTGTTaGGTGCTTGAATACCTGAAG +
Preference number: 4 (lower is better)
Translates to: IRDVQNRRHYLCRQVNNSVQDSC*VLEYLK
Trigger: CTTCAGGTATTCAAGCACCCAACAGCTATCTTGAAC...GGAATTATTTACCTGCCTGCACAAATAATGTCTTCTGTTTTGTACATCCCTTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030868.11
CDS-3UTR CCA 90 bp ATAAGGGATGTACAAAACAGAAGACATTATTTGTGCAGGCAGGTAAATAATTCCTTGACTTCTGGATCTTaGGTTCTCATCTTTAGTAAC +
Preference number: 4 (lower is better)
Translates to: IRDVQNRRHYLCRQVNNSLTSGS*VLIFSN
Trigger: GTTACTAAAGATGAGAACCCAAGATCCAGAAGTCAA...GGAATTATTTACCTGCCTGCACAAATAATGTCTTCTGTTTTGTACATCCCTTAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030868.11
3UTR CAA 72 bp TGTTCATCCTCAATGGTAAGGAACTACACATTACATTaGTCAACTGATCTTTCACAACACTCTTCTAAGTCT +
Preference number: 4 (lower is better)
Translates to: CSSSMVRNYTLH*STDLSQHSSKS
Trigger: AGACTTAGAAGAGTGTTGTGAAAGATCAGTTGACAAATGTAATGTGTAGTTCCTTACCATTGAGGATGAACA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030868.11
CDS GCA 90 bp GGGCTGCCCTTGTTGCGCTGTCTCCGCTTCTCCTTGTACCACATCTaGTCACAGTACTGGTCCAGGCTGAAGTTCGGGCTGCTAAGGATT +
Preference number: 5 (lower is better)
Translates to: GLPLLRCLRFSLYHI*SQYWSRLKFGLLRI
Trigger: AATCCTTAGCAGCCCGAACTTCAGCCTGGACCAGTACTGTGAGCAGATGTGGTACAAGGAGAAGCGGAGACAGCGCAACAAGGGCAGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030868.11
CDS GCA 90 bp GTCGGTGCTCCTGCCACTGGGTACACGGACTTATACATCACAGGGTaGCGCCTTATGAAACTGATAACATCGTCTGGAAAGTCTCGGGTG +
Preference number: 5 (lower is better)
Translates to: VGAPATGYTDLYITG*RLMKLITSSGKSRV
Trigger: CACCCGAGACTTTCCAGACGATGTTATCAGTTTCATAAGGCGGCACCCTGTGATGTATAAGTCCGTGTACCCAGTGGCAGGAGCACCGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030868.11
ENSMUST00000197927.2
CDS-3UTR CAA 90 bp AGCCTGGTCCACAAAGAGGGAACATGCCTTTCTAAATTCCCACGCCTGACTCCATCAGCCAACAGATCCTaGACCTGCCCCTCCTGGTAT +
Preference number: 5 (lower is better)
Translates to: SLVHKEGTCLSKFPRLTPSANRS*TCPSWY
Trigger: ATACCAGGAGGGGCAGGTCAAGGATCTGTTGGCTGA...TGGAGTCAGGCGTGGGAATTTAGAAAGGCATGTTCCCTCTTTGTGGACCAGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030868.11
CDS TCA 90 bp GCATCCTTGCTGGTGATAGCTTACCTCCTCTCGATGCTCATCTCCTaGCCGCTGGATGTACCACTCAACAGAGGCTTGTTGGGATTTAGG +
Preference number: 5 (lower is better)
Translates to: ASLLVIAYLLSMLIS*PLDVPLNRGLLGFR
Trigger: CCTAAATCCCAACAAGCCTCTGTTGAGTGGTACATCCAGCGGTCAGGAGATGAGCATCGAGAGGAGGTAAGCTATCACCAGCAAGGATGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000197927.2
CDS GCA 90 bp CGTCAGTCTGTAATCCACGTTGATTCTCTTGAAGGTCGGTGCTCCTaGCACTGGGTACACGGACTTATACATCACAGGGTGCCGCCTTAT +
Preference number: 5 (lower is better)
Translates to: RQSVIHVDSLEGRCS*HWVHGLIHHRVPPY
Trigger: ATAAGGCGGCACCCTGTGATGTATAAGTCCGTGTACCCAGTGGCAGGAGCACCGACCTTCAAGAGAATCAACGTGGATTACAGACTGACG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030868.11
ENSMUST00000197927.2
CDS GCA 90 bp TATCTGCGTCAGTCTGTAATCCACGTTGATTCTCTTGAAGGTCGGTaGTCCTGCCACTGGGTACACGGACTTATACATCACAGGGTGCCG +
Preference number: 5 (lower is better)
Translates to: YLRQSVIHVDSLEGR*SCHWVHGLIHHRVP
Trigger: CGGCACCCTGTGATGTATAAGTCCGTGTACCCAGTGGCAGGAGCACCGACCTTCAAGAGAATCAACGTGGATTACAGACTGACGCAGATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030868.11
ENSMUST00000197927.2
CDS-3UTR CAA 90 bp GGAGTAGACAGGTCTCCTAACCATTTCTCCAGCCACACAGTGGACTCTTTTGTCGGTCATAGGTTTTGCTaGGACACGTTCCAGGTCGGG +
Preference number: 5 (lower is better)
Translates to: GVDRSPNHFSSHTVDSFVGHRFC*DTFQVG
Trigger: CCCGACCTGGAACGTGTCCAAGCAAAACCTATGACC...GACAAAAGAGTCCACTGTGTGGCTGGAGAAATGGTTAGGAGACCTGTCTACTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000197927.2
CDS GCA 90 bp AGCCAGTGGTGCTCTGAAATGTCAGTTCTGATGGAATGGTGGTCCTaGATTAGCCCCAGAGACCTTGTGAATGCAGTGTCTTTGCCAAGG +
Preference number: 5 (lower is better)
Translates to: SQWCSEMSVLMEWWS*ISPRDLVNAVSLPR
Trigger: CCTTGGCAAAGACACTGCATTCACAAGGTCTCTGGGGCTAATGCAGGACCACCATTCCATCAGAACTGACATTTCAGAGCACCACTGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030868.11
ENSMUST00000197927.2
CDS GCA 90 bp TCTTCTTCATTTCCTGCATGTGCTTCCACTTTGGGCTGCCCTTGTTaGGCTGTCTCCGCTTCTCCTTGTACCACATCTGCTCACAGTACT +
Preference number: 5 (lower is better)
Translates to: SSSFPACASTLGCPC*AVSASPCTTSAHST
Trigger: AGTACTGTGAGCAGATGTGGTACAAGGAGAAGCGGAGACAGCGCAACAAGGGCAGCCCAAAGTGGAAGCACATGCAGGAAATGAAGAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030868.11
CDS-3UTR CAA 90 bp GGAGTAGACAGGTCTCCTAACCATTTCTCCAGCCACACAGTGGACTCTTTTGTCCAGACAGCAGAGCCTTaGAAGATGGAGCTGGTTGTG +
Preference number: 5 (lower is better)
Translates to: GVDRSPNHFSSHTVDSFVQTAEP*KMELVV
Trigger: CACAACCAGCTCCATCTTCAAAGGCTCTGCTGTCTG...GACAAAAGAGTCCACTGTGTGGCTGGAGAAATGGTTAGGAGACCTGTCTACTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000197927.2
CDS TCA 90 bp GGATGTAGTCTTTGTATCTCAACCGTGACTCAGCCAACAGATCCTTaGCCTGCCCCTCCTGGTATTCTGCCCTCTGGGTATTTTCCATCT +
Preference number: 5 (lower is better)
Translates to: GCSLCISTVTQPTDP*PAPPGILPSGYFPS
Trigger: AGATGGAAAATACCCAGAGGGCAGAATACCAGGAGGGGCAGGTCAAGGATCTGTTGGCTGAGTCACGGTTGAGATACAAAGACTACATCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030868.11
CDS CCA 90 bp CCATTGAGCCAGTGGTGCTCTGAAATGTCAGTTCTGATGGAATGGTaGTCCTGCATTAGCCCCAGAGACCTTGTGAATGCAGTGTCTTTG +
Preference number: 5 (lower is better)
Translates to: PLSQWCSEMSVLMEW*SCISPRDLVNAVSL
Trigger: CAAAGACACTGCATTCACAAGGTCTCTGGGGCTAATGCAGGACCACCATTCCATCAGAACTGACATTTCAGAGCACCACTGGCTCAATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030868.11
ENSMUST00000197927.2
CDS CCA 90 bp GAAACTGATAACATCGTCTGGAAAGTCTCGGGTGGACTTAATCAGTaGGTCATAGGTTTTGCTTGGACACGTTCCAGGTCGGGGGTAAGG +
Preference number: 5 (lower is better)
Translates to: ETDNIVWKVSGGLNQ*VIGFAWTRSRSGVR
Trigger: CCTTACCCCCGACCTGGAACGTGTCCAAGCAAAACCTATGACCCACTGATTAAGTCCACCCGAGACTTTCCAGACGATGTTATCAGTTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000030868.11
ENSMUST00000197927.2
CDS CCA 90 bp TCTGTAATCCACGTTGATTCTCTTGAAGGTCGGTGCTCCTGCCACTaGGTACACGGACTTATACATCACAGGGTGCCGCCTTATGAAACT +
Preference number: 5 (lower is better)
Translates to: SVIHVDSLEGRCSCH*VHGLIHHRVPPYET
Trigger: AGTTTCATAAGGCGGCACCCTGTGATGTATAAGTCCGTGTACCCAGTGGCAGGAGCACCGACCTTCAAGAGAATCAACGTGGATTACAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030868.11
ENSMUST00000197927.2
CDS CCA 90 bp TCGTCGATTTCGTTTCTTCTTCATTTCCTGCATGTGCTTCCACTTTaGGCTGCCCTTGTTGCGCTGTCTCCGCTTCTCCTTGTACCACAT +
Preference number: 5 (lower is better)
Translates to: SSISFLLHFLHVLPL*AALVALSPLLLVPH
Trigger: ATGTGGTACAAGGAGAAGCGGAGACAGCGCAACAAGGGCAGCCCAAAGTGGAAGCACATGCAGGAAATGAAGAAGAAACGAAATCGACGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030868.11
CDS-3UTR CAA 90 bp AGCCTGGTCCACAAAGAGGGAACATGCCTTTCTAAATTCCCACGCCTGACTCCAGCTCCACTCGTTCTTTaGCAGCAGGCCAATAAATCT +
Preference number: 5 (lower is better)
Translates to: SLVHKEGTCLSKFPRLTPAPLVL*QQANKS
Trigger: AGATTTATTGGCCTGCTGCAAAAGAACGAGTGGAGC...TGGAGTCAGGCGTGGGAATTTAGAAAGGCATGTTCCCTCTTTGTGGACCAGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030868.11
CDS-3UTR CAA 90 bp CATCCATTCAACAAATATATAGCCCCACTCCCCACCTTGGTCATCTACTCAATTTTTGGGCTGCCCTTGTaGCGCTGTCTCCGCTTCTCC +
Preference number: 5 (lower is better)
Translates to: HPFNKYIAPLPTLVIYSIFGLPL*RCLRFS
Trigger: GGAGAAGCGGAGACAGCGCAACAAGGGCAGCCCAAA...AATTGAGTAGATGACCAAGGTGGGGAGTGGGGCTATATATTTGTTGAATGGATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000030868.11
CDS TCA 90 bp GATGATCCTTTCATCAGGTTTCAACTCCTCTCGATGCTCATCTCCTaGCCGCTGGATGTACCACTCAACAGAGGCTTGTTGGGATTTAGG +
Preference number: 5 (lower is better)
Translates to: DDPFIRFQLLSMLIS*PLDVPLNRGLLGFR
Trigger: CCTAAATCCCAACAAGCCTCTGTTGAGTGGTACATCCAGCGGTCAGGAGATGAGCATCGAGAGGAGTTGAAACCTGATGAAAGGATCATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030868.11
CDS CCA 90 bp TGGAAAGTCTCGGGTGGACTTAATCAGTGGGTCATAGGTTTTGCTTaGACACGTTCCAGGTCGGGGGTAAGGTATCCTTCCATCATATTG +
Preference number: 5 (lower is better)
Translates to: WKVSGGLNQWVIGFA*TRSRSGVRYPSIIL
Trigger: CAATATGATGGAAGGATACCTTACCCCCGACCTGGAACGTGTCCAAGCAAAACCTATGACCCACTGATTAAGTCCACCCGAGACTTTCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000030868.11
ENSMUST00000197927.2
CDS CCA 90 bp CCTGAAGCTCCTCCAGTACGACCTCTTCCATATTCCACTTCTCCTTaGAGATGCTCACAACTTTCAGGACTGTTCCAATGTCTGTTCCGA +
Preference number: 5 (lower is better)
Translates to: PEAPPVRPLPYSTSP*RCSQLSGLFQCLFR
Trigger: TCGGAACAGACATTGGAACAGTCCTGAAAGTTGTGAGCATCTCCAAGGAGAAGTGGAATATGGAAGAGGTCGTACTGGAGGAGCTTCAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030868.11
ENSMUST00000197927.2
CDS CCA 90 bp TATCTCAACCGTGACTCAGCCAACAGATCCTTGACCTGCCCCTCCTaGTATTCTGCCCTCTGGGTATTTTCCATCTGTTCATTCTCAATG +
Preference number: 5 (lower is better)
Translates to: YLNRDSANRSLTCPS*YSALWVFSICSFSM
Trigger: CATTGAGAATGAACAGATGGAAAATACCCAGAGGGCAGAATACCAGGAGGGGCAGGTCAAGGATCTGTTGGCTGAGTCACGGTTGAGATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030868.11
CDS-3UTR CAA 90 bp AGCCTGGTCCACAAAGAGGGAACATGCCTTTCTAAATTCCCACGCCTGACTCCAAGGGGATACAGGTGTTaGAAAGCAGCAAGTCTTTGT +
Preference number: 5 (lower is better)
Translates to: SLVHKEGTCLSKFPRLTPRGYRC*KAASLC
Trigger: ACAAAGACTTGCTGCTTTCAAACACCTGTATCCCCT...TGGAGTCAGGCGTGGGAATTTAGAAAGGCATGTTCCCTCTTTGTGGACCAGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030868.11
CDS-3UTR CAA 90 bp GGAGTAGACAGGTCTCCTAACCATTTCTCCAGCCACACAGTGGACTCTTTTGTCCTGCCAGACTCCAGGTaGTGCGTGTCTAGTTTAAAT +
Preference number: 5 (lower is better)
Translates to: GVDRSPNHFSSHTVDSFVLPDSR*CVSSLN
Trigger: ATTTAAACTAGACACGCACAACCTGGAGTCTGGCAG...GACAAAAGAGTCCACTGTGTGGCTGGAGAAATGGTTAGGAGACCTGTCTACTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000197927.2
CDS-3UTR CAA 90 bp AGCCTGGTCCACAAAGAGGGAACATGCCTTTCTAAATTCCCACGCCTGACTCCACGGGCTGCTAAGGATTaGGATGTAGTCTTTGTATCT +
Preference number: 5 (lower is better)
Translates to: SLVHKEGTCLSKFPRLTPRAAKD*DVVFVS
Trigger: AGATACAAAGACTACATCCAAATCCTTAGCAGCCCG...TGGAGTCAGGCGTGGGAATTTAGAAAGGCATGTTCCCTCTTTGTGGACCAGGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030868.11
CDS-3UTR CAA 90 bp TCTTTTACCATGCTTCCCAAAGAGCACAGGAAGTGTGTACTAAGTTCCATTGTCGCATGTGCTTCCACTTaGGGCTGCCCTTGTTGCGCT +
Preference number: 5 (lower is better)
Translates to: SFTMLPKEHRKCVLSSIVACAST*GCPCCA
Trigger: AGCGCAACAAGGGCAGCCCAAAGTGGAAGCACATGC...GACAATGGAACTTAGTACACACTTCCTGTGCTCTTTGGGAAGCATGGTAAAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030868.11
CDS TCA 90 bp AGCGACAACTCCATGTTCAAGATAGCTGTTGGGTGCTTGAATACCTaGAGCTCCTCCAGTACGACCTCTTCCATATTCCACTTCTCCTTG +
Preference number: 5 (lower is better)
Translates to: SDNSMFKIAVGCLNT*SSSSTTSSIFHFSL
Trigger: CAAGGAGAAGTGGAATATGGAAGAGGTCGTACTGGAGGAGCTTCAGGTATTCAAGCACCCAACAGCTATCTTGAACATGGAGTTGTCGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030868.11
ENSMUST00000197927.2
CDS GCA 90 bp GCTCCTCCAGTACGACCTCTTCCATATTCCACTTCTCCTTGGAGATaGTCACAACTTTCAGGACTGTTCCAATGTCTGTTCCGAGAAACA +
Preference number: 5 (lower is better)
Translates to: APPVRPLPYSTSPWR*SQLSGLFQCLFRET
Trigger: TGTTTCTCGGAACAGACATTGGAACAGTCCTGAAAGTTGTGAGCATCTCCAAGGAGAAGTGGAATATGGAAGAGGTCGTACTGGAGGAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030868.11
ENSMUST00000197927.2
CDS CCA 90 bp CTTTCATCAGGTTTCAACTCCTCTCGATGCTCATCTCCTGACCGCTaGATGTACCACTCAACAGAGGCTTGTTGGGATTTAGGTATACAC +
Preference number: 5 (lower is better)
Translates to: LSSGFNSSRCSSPDR*MYHSTEACWDLGIH
Trigger: GTGTATACCTAAATCCCAACAAGCCTCTGTTGAGTGGTACATCCAGCGGTCAGGAGATGAGCATCGAGAGGAGTTGAAACCTGATGAAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030868.11
CDS-3UTR CAA 90 bp GGAGTAGACAGGTCTCCTAACCATTTCTCCAGCCACACAGTGGACTCTTTTGTCAGGGGATACAGGTGTTaGAAAGCAGCAAGTCTTTGT +
Preference number: 5 (lower is better)
Translates to: GVDRSPNHFSSHTVDSFVRGYRC*KAASLC
Trigger: ACAAAGACTTGCTGCTTTCAAACACCTGTATCCCCT...GACAAAAGAGTCCACTGTGTGGCTGGAGAAATGGTTAGGAGACCTGTCTACTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000197927.2
CDS-3UTR CAA 90 bp AGCCTGGTCCACAAAGAGGGAACATGCCTTTCTAAATTCCCACGCCTGACTCCATTTGCACATTCTGCATaGGCATCTTTCCCAGCTAAT +
Preference number: 5 (lower is better)
Translates to: SLVHKEGTCLSKFPRLTPFAHSA*ASFPAN
Trigger: ATTAGCTGGGAAAGATGCCAATGCAGAATGTGCAAA...TGGAGTCAGGCGTGGGAATTTAGAAAGGCATGTTCCCTCTTTGTGGACCAGGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030868.11
CDS-3UTR CAA 90 bp GGAGTAGACAGGTCTCCTAACCATTTCTCCAGCCACACAGTGGACTCTTTTGTCGTGAATGCAGTGTCTTaGCCAAGGAAATCAGAAGCT +
Preference number: 5 (lower is better)
Translates to: GVDRSPNHFSSHTVDSFVVNAVS*PRKSEA
Trigger: AGCTTCTGATTTCCTTGGCAAAGACACTGCATTCAC...GACAAAAGAGTCCACTGTGTGGCTGGAGAAATGGTTAGGAGACCTGTCTACTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000197927.2
CDS-3UTR CAA 90 bp GGAGTAGACAGGTCTCCTAACCATTTCTCCAGCCACACAGTGGACTCTTTTGTCCTCAACAGAGGCTTGTaGGGATTTAGGTATACACTC +
Preference number: 5 (lower is better)
Translates to: GVDRSPNHFSSHTVDSFVLNRGL*GFRYTL
Trigger: GAGTGTATACCTAAATCCCAACAAGCCTCTGTTGAG...GACAAAAGAGTCCACTGTGTGGCTGGAGAAATGGTTAGGAGACCTGTCTACTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000197927.2
CDS-3UTR CAA 90 bp GGAGTAGACAGGTCTCCTAACCATTTCTCCAGCCACACAGTGGACTCTTTTGTCCCACTCAACAGAGGCTaGTTGGGATTTAGGTATACA +
Preference number: 5 (lower is better)
Translates to: GVDRSPNHFSSHTVDSFVPLNRG*LGFRYT
Trigger: TGTATACCTAAATCCCAACAAGCCTCTGTTGAGTGG...GACAAAAGAGTCCACTGTGTGGCTGGAGAAATGGTTAGGAGACCTGTCTACTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000197927.2
CDS-3UTR CAA 90 bp GATAGATTGCTTGACTCTGTAAAACTGCTTTTTAATCACACAGGCTTCTCACAGCACTTTGGGCTGCCCTaGTTGCGCTGTCTCCGCTTC +
Preference number: 5 (lower is better)
Translates to: DRLLDSVKLLFNHTGFSQHFGLP*LRCLRF
Trigger: GAAGCGGAGACAGCGCAACAAGGGCAGCCCAAAGTG...CTGTGAGAAGCCTGTGTGATTAAAAAGCAGTTTTACAGAGTCAAGCAATCTATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000030868.11
CDS GCA 90 bp GGAATGGGGAATGTTCCGATAAATTTTGCTCCATTGAGCCAGTGGTaGTCTGAAATGTCAGTTCTGATGGAATGGTGGTCCTGCATTAGC +
Preference number: 5 (lower is better)
Translates to: GMGNVPINFAPLSQW*SEMSVLMEWWSCIS
Trigger: GCTAATGCAGGACCACCATTCCATCAGAACTGACATTTCAGAGCACCACTGGCTCAATGGAGCAAAATTTATCGGAACATTCCCCATTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000030868.11
ENSMUST00000197927.2
CDS-3UTR CAA 90 bp GGAGTAGACAGGTCTCCTAACCATTTCTCCAGCCACACAGTGGACTCTTTTGTCTTTGCACATTCTGCATaGGCATCTTTCCCAGCTAAT +
Preference number: 5 (lower is better)
Translates to: GVDRSPNHFSSHTVDSFVFAHSA*ASFPAN
Trigger: ATTAGCTGGGAAAGATGCCAATGCAGAATGTGCAAA...GACAAAAGAGTCCACTGTGTGGCTGGAGAAATGGTTAGGAGACCTGTCTACTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000197927.2
CDS-3UTR CAA 90 bp GGAGTAGACAGGTCTCCTAACCATTTCTCCAGCCACACAGTGGACTCTTTTGTCATAAATTTTGCTCCATaGAGCCAGTGGTGCTCTGAA +
Preference number: 5 (lower is better)
Translates to: GVDRSPNHFSSHTVDSFVINFAP*SQWCSE
Trigger: TTCAGAGCACCACTGGCTCAATGGAGCAAAATTTAT...GACAAAAGAGTCCACTGTGTGGCTGGAGAAATGGTTAGGAGACCTGTCTACTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000197927.2
CDS-3UTR CAA 90 bp GGAGTAGACAGGTCTCCTAACCATTTCTCCAGCCACACAGTGGACTCTTTTGTCGTTTATCAGACTTCGTaGCCCACCTACATCATTCTT +
Preference number: 5 (lower is better)
Translates to: GVDRSPNHFSSHTVDSFVVYQTS*PTYIIL
Trigger: AAGAATGATGTAGGTGGGCAACGAAGTCTGATAAAC...GACAAAAGAGTCCACTGTGTGGCTGGAGAAATGGTTAGGAGACCTGTCTACTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000197927.2
CDS CCA 90 bp TTCTTAAAATTCTTGTTCAAGTCAACCAGACTGAGCAGGAAGACATaGTCTTTGGCTCCTAGGAGCAGTATGCCCCTCTCCTCATCCAAA +
Preference number: 5 (lower is better)
Translates to: FLKFLFKSTRLSRKT*SLAPRSSMPLSSSK
Trigger: TTTGGATGAGGAGAGGGGCATACTGCTCCTAGGAGCCAAAGACCATGTCTTCCTGCTCAGTCTGGTTGACTTGAACAAGAATTTTAAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000030868.11
ENSMUST00000197927.2
CDS CCA 90 bp CTTATACATCACAGGGTGCCGCCTTATGAAACTGATAACATCGTCTaGAAAGTCTCGGGTGGACTTAATCAGTGGGTCATAGGTTTTGCT +
Preference number: 5 (lower is better)
Translates to: LIHHRVPPYETDNIV*KVSGGLNQWVIGFA
Trigger: AGCAAAACCTATGACCCACTGATTAAGTCCACCCGAGACTTTCCAGACGATGTTATCAGTTTCATAAGGCGGCACCCTGTGATGTATAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030868.11
ENSMUST00000197927.2
CDS-3UTR CAA 90 bp GGAGTAGACAGGTCTCCTAACCATTTCTCCAGCCACACAGTGGACTCTTTTGTCAAACTCTTCCAACTCTaGAAAGAATGCTTCTGTCAG +
Preference number: 5 (lower is better)
Translates to: GVDRSPNHFSSHTVDSFVKLFQL*KECFCQ
Trigger: CTGACAGAAGCATTCTTTCAAGAGTTGGAAGAGTTT...GACAAAAGAGTCCACTGTGTGGCTGGAGAAATGGTTAGGAGACCTGTCTACTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000197927.2
CDS GCA 90 bp ATTCAAAGTCAGCTTCACTATGGTGTGGATGAAAGTGTGCTCCTGTaGTTTGCAGTAATACATCCCAGAATCCTTCTTCTGCAGACTTCG +
Preference number: 5 (lower is better)
Translates to: IQSQLHYGVDESVLL*FAVIHPRILLLQTS
Trigger: CGAAGTCTGCAGAAGAAGGATTCTGGGATGTATTACTGCAAAGCACAGGAGCACACTTTCATCCACACCATAGTGAAGCTGACTTTGAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030868.11
CDS-3UTR CAA 90 bp GGAGTAGACAGGTCTCCTAACCATTTCTCCAGCCACACAGTGGACTCTTTTGTCGAGTCTTGGAATATTTaGTTTAGACGTTTCAGTGAC +
Preference number: 5 (lower is better)
Translates to: GVDRSPNHFSSHTVDSFVESWNI*FRRFSD
Trigger: GTCACTGAAACGTCTAAACAAAATATTCCAAGACTC...GACAAAAGAGTCCACTGTGTGGCTGGAGAAATGGTTAGGAGACCTGTCTACTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000197927.2
CDS-3UTR CAA 90 bp TCTTTTACCATGCTTCCCAAAGAGCACAGGAAGTGTGTACTAAGTTCCATTGTCCTGCCAGACTCCAGGTaGTGCGTGTCTAGTTTAAAT +
Preference number: 5 (lower is better)
Translates to: SFTMLPKEHRKCVLSSIVLPDSR*CVSSLN
Trigger: ATTTAAACTAGACACGCACAACCTGGAGTCTGGCAG...GACAATGGAACTTAGTACACACTTCCTGTGCTCTTTGGGAAGCATGGTAAAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030868.11
CDS-3UTR CAA 90 bp GACTTCCTTGTGAAACTGCTGAAAACAACACTGCTTGAAAGTTTATGTAACGAGCAGACAGCAGAGCCTTaGAAGATGGAGCTGGTTGTG +
Preference number: 5 (lower is better)
Translates to: DFLVKLLKTTLLESLCNEQTAEP*KMELVV
Trigger: CACAACCAGCTCCATCTTCAAAGGCTCTGCTGTCTG...CTCGTTACATAAACTTTCAAGCAGTGTTGTTTTCAGCAGTTTCACAAGGAAGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030868.11
CDS-3UTR CAA 90 bp GACTTCCTTGTGAAACTGCTGAAAACAACACTGCTTGAAAGTTTATGTAACGAGTGTCTCCGCTTCTCCTaGTACCACATCTGCTCACAG +
Preference number: 5 (lower is better)
Translates to: DFLVKLLKTTLLESLCNECLRFS*YHICSQ
Trigger: CTGTGAGCAGATGTGGTACAAGGAGAAGCGGAGACA...CTCGTTACATAAACTTTCAAGCAGTGTTGTTTTCAGCAGTTTCACAAGGAAGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030868.11
CDS GCA 90 bp GCCCACCTACATCATTCTTACAAACTCTTCCAACTCTTGAAAGAATaGTTCTGTCAGAAGTACTGCCTTCCTGGGATGATTCTCGAAAGA +
Preference number: 5 (lower is better)
Translates to: AHLHHSYKLFQLLKE*FCQKYCLPGMILER
Trigger: TCTTTCGAGAATCATCCCAGGAAGGCAGTACTTCTGACAGAAGCATTCTTTCAAGAGTTGGAAGAGTTTGTAAGAATGATGTAGGTGGGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030868.11
ENSMUST00000197927.2
CDS-3UTR CAA 90 bp ATAAGGGATGTACAAAACAGAAGACATTATTTGTGCAGGCAGGTAAATAATTCCGGTCATAGGTTTTGCTaGGACACGTTCCAGGTCGGG +
Preference number: 5 (lower is better)
Translates to: IRDVQNRRHYLCRQVNNSGHRFC*DTFQVG
Trigger: CCCGACCTGGAACGTGTCCAAGCAAAACCTATGACC...GGAATTATTTACCTGCCTGCACAAATAATGTCTTCTGTTTTGTACATCCCTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030868.11
CDS-3UTR CAA 90 bp TCTTTTACCATGCTTCCCAAAGAGCACAGGAAGTGTGTACTAAGTTCCATTGTCCTCAACAGAGGCTTGTaGGGATTTAGGTATACACTC +
Preference number: 5 (lower is better)
Translates to: SFTMLPKEHRKCVLSSIVLNRGL*GFRYTL
Trigger: GAGTGTATACCTAAATCCCAACAAGCCTCTGTTGAG...GACAATGGAACTTAGTACACACTTCCTGTGCTCTTTGGGAAGCATGGTAAAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030868.11
CDS CCA 90 bp TGCTCATCTCCTGACCGCTGGATGTACCACTCAACAGAGGCTTGTTaGGATTTAGGTATACACTCCAAAAAGGTTGAATTAAATTCAATT +
Preference number: 5 (lower is better)
Translates to: CSSPDRWMYHSTEAC*DLGIHSKKVELNSI
Trigger: AATTGAATTTAATTCAACCTTTTTGGAGTGTATACCTAAATCCCAACAAGCCTCTGTTGAGTGGTACATCCAGCGGTCAGGAGATGAGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000030868.11
ENSMUST00000197927.2
CDS-3UTR CAA 90 bp GATAGATTGCTTGACTCTGTAAAACTGCTTTTTAATCACACAGGCTTCTCACAGGTGAATGCAGTGTCTTaGCCAAGGAAATCAGAAGCT +
Preference number: 5 (lower is better)
Translates to: DRLLDSVKLLFNHTGFSQVNAVS*PRKSEA
Trigger: AGCTTCTGATTTCCTTGGCAAAGACACTGCATTCAC...CTGTGAGAAGCCTGTGTGATTAAAAAGCAGTTTTACAGAGTCAAGCAATCTATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000030868.11
CDS-3UTR CAA 90 bp TCTTTTACCATGCTTCCCAAAGAGCACAGGAAGTGTGTACTAAGTTCCATTGTCAAACTCTTCCAACTCTaGAAAGAATGCTTCTGTCAG +
Preference number: 5 (lower is better)
Translates to: SFTMLPKEHRKCVLSSIVKLFQL*KECFCQ
Trigger: CTGACAGAAGCATTCTTTCAAGAGTTGGAAGAGTTT...GACAATGGAACTTAGTACACACTTCCTGTGCTCTTTGGGAAGCATGGTAAAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030868.11
CDS-3UTR CAA 90 bp GATAGATTGCTTGACTCTGTAAAACTGCTTTTTAATCACACAGGCTTCTCACAGCCACTCAACAGAGGCTaGTTGGGATTTAGGTATACA +
Preference number: 5 (lower is better)
Translates to: DRLLDSVKLLFNHTGFSQPLNRG*LGFRYT
Trigger: TGTATACCTAAATCCCAACAAGCCTCTGTTGAGTGG...CTGTGAGAAGCCTGTGTGATTAAAAAGCAGTTTTACAGAGTCAAGCAATCTATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000030868.11
CDS-3UTR CAA 90 bp TCTTTTACCATGCTTCCCAAAGAGCACAGGAAGTGTGTACTAAGTTCCATTGTCGAGTCTTGGAATATTTaGTTTAGACGTTTCAGTGAC +
Preference number: 5 (lower is better)
Translates to: SFTMLPKEHRKCVLSSIVESWNI*FRRFSD
Trigger: GTCACTGAAACGTCTAAACAAAATATTCCAAGACTC...GACAATGGAACTTAGTACACACTTCCTGTGCTCTTTGGGAAGCATGGTAAAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030868.11
CDS-3UTR CAA 90 bp GATAGATTGCTTGACTCTGTAAAACTGCTTTTTAATCACACAGGCTTCTCACAGATAAATTTTGCTCCATaGAGCCAGTGGTGCTCTGAA +
Preference number: 5 (lower is better)
Translates to: DRLLDSVKLLFNHTGFSQINFAP*SQWCSE
Trigger: TTCAGAGCACCACTGGCTCAATGGAGCAAAATTTAT...CTGTGAGAAGCCTGTGTGATTAAAAAGCAGTTTTACAGAGTCAAGCAATCTATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000030868.11
CDS-3UTR CAA 90 bp GACTTCCTTGTGAAACTGCTGAAAACAACACTGCTTGAAAGTTTATGTAACGAGGTTTATCAGACTTCGTaGCCCACCTACATCATTCTT +
Preference number: 5 (lower is better)
Translates to: DFLVKLLKTTLLESLCNEVYQTS*PTYIIL
Trigger: AAGAATGATGTAGGTGGGCAACGAAGTCTGATAAAC...CTCGTTACATAAACTTTCAAGCAGTGTTGTTTTCAGCAGTTTCACAAGGAAGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030868.11
CDS CAA 90 bp TGCTTCCACTTTGGGCTGCCCTTGTTGCGCTGTCTCCGCTTCTCCTaGTACCACATCTGCTCACAGTACTGGTCCAGGCTGAAGTTCGGG +
Preference number: 6 (lower is better)
Translates to: CFHFGLPLLRCLRFS*YHICSQYWSRLKFG
Trigger: CCCGAACTTCAGCCTGGACCAGTACTGTGAGCAGATGTGGTACAAGGAGAAGCGGAGACAGCGCAACAAGGGCAGCCCAAAGTGGAAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030868.11
CDS CAA 72 bp TTTGGGCTGCCCTTGTTGCGCTGTCTCCGCTTCTCCTaGTACCACATCTGCTCACAGTACTGGTCCAGGCTG +
Preference number: 6 (lower is better)
Translates to: FGLPLLRCLRFS*YHICSQYWSRL
Trigger: CAGCCTGGACCAGTACTGTGAGCAGATGTGGTACAAGGAGAAGCGGAGACAGCGCAACAAGGGCAGCCCAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030868.11
CDS GCA 72 bp TTGTTGCGCTGTCTCCGCTTCTCCTTGTACCACATCTaGTCACAGTACTGGTCCAGGCTGAAGTTCGGGCTG +
Preference number: 6 (lower is better)
Translates to: LLRCLRFSLYHI*SQYWSRLKFGL
Trigger: CAGCCCGAACTTCAGCCTGGACCAGTACTGTGAGCAGATGTGGTACAAGGAGAAGCGGAGACAGCGCAACAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030868.11
CDS CCA 72 bp CACGTTGATTCTCTTGAAGGTCGGTGCTCCTGCCACTaGGTACACGGACTTATACATCACAGGGTGCCGCCT +
Preference number: 6 (lower is better)
Translates to: HVDSLEGRCSCH*VHGLIHHRVPP
Trigger: AGGCGGCACCCTGTGATGTATAAGTCCGTGTACCCAGTGGCAGGAGCACCGACCTTCAAGAGAATCAACGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030868.11
ENSMUST00000197927.2
CDS GCA 72 bp TTTCCTGCATGTGCTTCCACTTTGGGCTGCCCTTGTTaGGCTGTCTCCGCTTCTCCTTGTACCACATCTGCT +
Preference number: 6 (lower is better)
Translates to: FPACASTLGCPC*AVSASPCTTSA
Trigger: AGCAGATGTGGTACAAGGAGAAGCGGAGACAGCGCAACAAGGGCAGCCCAAAGTGGAAGCACATGCAGGAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030868.11
CDS CCA 72 bp CTCCGCTTCTCCTTGTACCACATCTGCTCACAGTACTaGTCCAGGCTGAAGTTCGGGCTGCTAAGGATTTGG +
Preference number: 6 (lower is better)
Translates to: LRFSLYHICSQY*SRLKFGLLRIW
Trigger: CCAAATCCTTAGCAGCCCGAACTTCAGCCTGGACCAGTACTGTGAGCAGATGTGGTACAAGGAGAAGCGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030868.11
CDS CAA 72 bp ATTTCCTGCATGTGCTTCCACTTTGGGCTGCCCTTGTaGCGCTGTCTCCGCTTCTCCTTGTACCACATCTGC +
Preference number: 6 (lower is better)
Translates to: ISCMCFHFGLPL*RCLRFSLYHIC
Trigger: GCAGATGTGGTACAAGGAGAAGCGGAGACAGCGCAACAAGGGCAGCCCAAAGTGGAAGCACATGCAGGAAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030868.11
CDS CAA 90 bp GCTTGGACACGTTCCAGGTCGGGGGTAAGGTATCCTTCCATCATATaGCACCCAGCGATGGTCAGCACTTTCCTTATGAGCATAGGGACC +
Preference number: 6 (lower is better)
Translates to: AWTRSRSGVRYPSII*HPAMVSTFLMSIGT
Trigger: GGTCCCTATGCTCATAAGGAAAGTGCTGACCATCGCTGGGTGCAATATGATGGAAGGATACCTTACCCCCGACCTGGAACGTGTCCAAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000030868.11
ENSMUST00000197927.2
CDS TCA 72 bp CTGGTGATAGCTTACCTCCTCTCGATGCTCATCTCCTaGCCGCTGGATGTACCACTCAACAGAGGCTTGTTG +
Preference number: 6 (lower is better)
Translates to: LVIAYLLSMLIS*PLDVPLNRGLL
Trigger: CAACAAGCCTCTGTTGAGTGGTACATCCAGCGGTCAGGAGATGAGCATCGAGAGGAGGTAAGCTATCACCAG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000197927.2
CDS GCA 72 bp TATCTCAACCGTGACTCAGCCAACAGATCCTTGACCTaGCCCTCCTGGTATTCTGCCCTCTGGGTATTTTCC +
Preference number: 6 (lower is better)
Translates to: YLNRDSANRSLT*PSWYSALWVFS
Trigger: GGAAAATACCCAGAGGGCAGAATACCAGGAGGGGCAGGTCAAGGATCTGTTGGCTGAGTCACGGTTGAGATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030868.11
CDS CCA 72 bp TCGGGTGGACTTAATCAGTGGGTCATAGGTTTTGCTTaGACACGTTCCAGGTCGGGGGTAAGGTATCCTTCC +
Preference number: 6 (lower is better)
Translates to: SGGLNQWVIGFA*TRSRSGVRYPS
Trigger: GGAAGGATACCTTACCCCCGACCTGGAACGTGTCCAAGCAAAACCTATGACCCACTGATTAAGTCCACCCGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000030868.11
ENSMUST00000197927.2
CDS CCA 72 bp CGTGACTCAGCCAACAGATCCTTGACCTGCCCCTCCTaGTATTCTGCCCTCTGGGTATTTTCCATCTGTTCA +
Preference number: 6 (lower is better)
Translates to: RDSANRSLTCPS*YSALWVFSICS
Trigger: TGAACAGATGGAAAATACCCAGAGGGCAGAATACCAGGAGGGGCAGGTCAAGGATCTGTTGGCTGAGTCACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030868.11
CDS CAA 72 bp CGTTCCAGGTCGGGGGTAAGGTATCCTTCCATCATATaGCACCCAGCGATGGTCAGCACTTTCCTTATGAGC +
Preference number: 6 (lower is better)
Translates to: RSRSGVRYPSII*HPAMVSTFLMS
Trigger: GCTCATAAGGAAAGTGCTGACCATCGCTGGGTGCAATATGATGGAAGGATACCTTACCCCCGACCTGGAACG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000030868.11
ENSMUST00000197927.2
CDS CAA 72 bp TCTTTGTATCTCAACCGTGACTCAGCCAACAGATCCTaGACCTGCCCCTCCTGGTATTCTGCCCTCTGGGTA +
Preference number: 6 (lower is better)
Translates to: SLYLNRDSANRS*TCPSWYSALWV
Trigger: TACCCAGAGGGCAGAATACCAGGAGGGGCAGGTCAAGGATCTGTTGGCTGAGTCACGGTTGAGATACAAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030868.11
CDS CAA 72 bp TTCATTTCCTGCATGTGCTTCCACTTTGGGCTGCCCTaGTTGCGCTGTCTCCGCTTCTCCTTGTACCACATC +
Preference number: 6 (lower is better)
Translates to: FISCMCFHFGLP*LRCLRFSLYHI
Trigger: GATGTGGTACAAGGAGAAGCGGAGACAGCGCAACAAGGGCAGCCCAAAGTGGAAGCACATGCAGGAAATGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030868.11
CDS CAA 90 bp CGTTTCTTCTTCATTTCCTGCATGTGCTTCCACTTTGGGCTGCCCTaGTTGCGCTGTCTCCGCTTCTCCTTGTACCACATCTGCTCACAG +
Preference number: 6 (lower is better)
Translates to: RFFFISCMCFHFGLP*LRCLRFSLYHICSQ
Trigger: CTGTGAGCAGATGTGGTACAAGGAGAAGCGGAGACAGCGCAACAAGGGCAGCCCAAAGTGGAAGCACATGCAGGAAATGAAGAAGAAACG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030868.11
CDS CAA 90 bp TTCTTCTTCATTTCCTGCATGTGCTTCCACTTTGGGCTGCCCTTGTaGCGCTGTCTCCGCTTCTCCTTGTACCACATCTGCTCACAGTAC +
Preference number: 6 (lower is better)
Translates to: FFFISCMCFHFGLPL*RCLRFSLYHICSQY
Trigger: GTACTGTGAGCAGATGTGGTACAAGGAGAAGCGGAGACAGCGCAACAAGGGCAGCCCAAAGTGGAAGCACATGCAGGAAATGAAGAAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030868.11
CDS CAA 90 bp GTCGTCGATTTCGTTTCTTCTTCATTTCCTGCATGTGCTTCCACTTaGGGCTGCCCTTGTTGCGCTGTCTCCGCTTCTCCTTGTACCACA +
Preference number: 6 (lower is better)
Translates to: VVDFVSSSFPACAST*GCPCCAVSASPCTT
Trigger: TGTGGTACAAGGAGAAGCGGAGACAGCGCAACAAGGGCAGCCCAAAGTGGAAGCACATGCAGGAAATGAAGAAGAAACGAAATCGACGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030868.11
CDS GCA 72 bp GTAATCCACGTTGATTCTCTTGAAGGTCGGTGCTCCTaGCACTGGGTACACGGACTTATACATCACAGGGTG +
Preference number: 6 (lower is better)
Translates to: VIHVDSLEGRCS*HWVHGLIHHRV
Trigger: CACCCTGTGATGTATAAGTCCGTGTACCCAGTGGCAGGAGCACCGACCTTCAAGAGAATCAACGTGGATTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030868.11
ENSMUST00000197927.2
CDS CCA 72 bp TTCTTGTTCAAGTCAACCAGACTGAGCAGGAAGACATaGTCTTTGGCTCCTAGGAGCAGTATGCCCCTCTCC +
Preference number: 6 (lower is better)
Translates to: FLFKSTRLSRKT*SLAPRSSMPLS
Trigger: GGAGAGGGGCATACTGCTCCTAGGAGCCAAAGACCATGTCTTCCTGCTCAGTCTGGTTGACTTGAACAAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030868.11
ENSMUST00000197927.2
CDS TCA 72 bp TGGAATGGTGGTCCTGCATTAGCCCCAGAGACCTTGTaGATGCAGTGTCTTTGCCAAGGAAATCAGAAGCTG +
Preference number: 6 (lower is better)
Translates to: WNGGPALAPETL*MQCLCQGNQKL
Trigger: CAGCTTCTGATTTCCTTGGCAAAGACACTGCATTCACAAGGTCTCTGGGGCTAATGCAGGACCACCATTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030868.11
ENSMUST00000197927.2
CDS TCA 72 bp TTCATCAGGTTTCAACTCCTCTCGATGCTCATCTCCTaGCCGCTGGATGTACCACTCAACAGAGGCTTGTTG +
Preference number: 6 (lower is better)
Translates to: FIRFQLLSMLIS*PLDVPLNRGLL
Trigger: CAACAAGCCTCTGTTGAGTGGTACATCCAGCGGTCAGGAGATGAGCATCGAGAGGAGTTGAAACCTGATGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030868.11
CDS GCA 72 bp CCTGCCACTGGGTACACGGACTTATACATCACAGGGTaGCGCCTTATGAAACTGATAACATCGTCTGGAAAG +
Preference number: 6 (lower is better)
Translates to: PATGYTDLYITG*RLMKLITSSGK
Trigger: CTTTCCAGACGATGTTATCAGTTTCATAAGGCGGCACCCTGTGATGTATAAGTCCGTGTACCCAGTGGCAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030868.11
ENSMUST00000197927.2
CDS GCA 72 bp CAGTCTGTAATCCACGTTGATTCTCTTGAAGGTCGGTaGTCCTGCCACTGGGTACACGGACTTATACATCAC +
Preference number: 6 (lower is better)
Translates to: QSVIHVDSLEGR*SCHWVHGLIHH
Trigger: GTGATGTATAAGTCCGTGTACCCAGTGGCAGGAGCACCGACCTTCAAGAGAATCAACGTGGATTACAGACTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030868.11
ENSMUST00000197927.2
CDS GCA 72 bp TGTCGTCGATTTCGTTTCTTCTTCATTTCCTGCATGTaGTTCCACTTTGGGCTGCCCTTGTTGCGCTGTCTC +
Preference number: 6 (lower is better)
Translates to: CRRFRFFFISCM*FHFGLPLLRCL
Trigger: GAGACAGCGCAACAAGGGCAGCCCAAAGTGGAAGCACATGCAGGAAATGAAGAAGAAACGAAATCGACGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030868.11
CDS CCA 72 bp CAGTGGTGCTCTGAAATGTCAGTTCTGATGGAATGGTaGTCCTGCATTAGCCCCAGAGACCTTGTGAATGCA +
Preference number: 6 (lower is better)
Translates to: QWCSEMSVLMEW*SCISPRDLVNA
Trigger: TGCATTCACAAGGTCTCTGGGGCTAATGCAGGACCACCATTCCATCAGAACTGACATTTCAGAGCACCACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030868.11
ENSMUST00000197927.2
CDS CCA 72 bp AACATCGTCTGGAAAGTCTCGGGTGGACTTAATCAGTaGGTCATAGGTTTTGCTTGGACACGTTCCAGGTCG +
Preference number: 6 (lower is better)
Translates to: NIVWKVSGGLNQ*VIGFAWTRSRS
Trigger: CGACCTGGAACGTGTCCAAGCAAAACCTATGACCCACTGATTAAGTCCACCCGAGACTTTCCAGACGATGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030868.11
ENSMUST00000197927.2
CDS CCA 72 bp GGTTTCAACTCCTCTCGATGCTCATCTCCTGACCGCTaGATGTACCACTCAACAGAGGCTTGTTGGGATTTA +
Preference number: 6 (lower is better)
Translates to: GFNSSRCSSPDR*MYHSTEACWDL
Trigger: TAAATCCCAACAAGCCTCTGTTGAGTGGTACATCCAGCGGTCAGGAGATGAGCATCGAGAGGAGTTGAAACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030868.11
CDS GCA 72 bp TGCTCTGAAATGTCAGTTCTGATGGAATGGTGGTCCTaGATTAGCCCCAGAGACCTTGTGAATGCAGTGTCT +
Preference number: 6 (lower is better)
Translates to: CSEMSVLMEWWS*ISPRDLVNAVS
Trigger: AGACACTGCATTCACAAGGTCTCTGGGGCTAATGCAGGACCACCATTCCATCAGAACTGACATTTCAGAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030868.11
ENSMUST00000197927.2
CDS CCA 72 bp CACAGGGTGCCGCCTTATGAAACTGATAACATCGTCTaGAAAGTCTCGGGTGGACTTAATCAGTGGGTCATA +
Preference number: 6 (lower is better)
Translates to: HRVPPYETDNIV*KVSGGLNQWVI
Trigger: TATGACCCACTGATTAAGTCCACCCGAGACTTTCCAGACGATGTTATCAGTTTCATAAGGCGGCACCCTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030868.11
ENSMUST00000197927.2
CDS CAA 90 bp AAATTCTTGTTCAAGTCAACCAGACTGAGCAGGAAGACATGGTCTTaGGCTCCTAGGAGCAGTATGCCCCTCTCCTCATCCAAAAGAAGA +
Preference number: 6 (lower is better)
Translates to: KFLFKSTRLSRKTWS*APRSSMPLSSSKRR
Trigger: TCTTCTTTTGGATGAGGAGAGGGGCATACTGCTCCTAGGAGCCAAAGACCATGTCTTCCTGCTCAGTCTGGTTGACTTGAACAAGAATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000030868.11
ENSMUST00000197927.2
CDS TCA 72 bp TCCATGTTCAAGATAGCTGTTGGGTGCTTGAATACCTaGAGCTCCTCCAGTACGACCTCTTCCATATTCCAC +
Preference number: 6 (lower is better)
Translates to: SMFKIAVGCLNT*SSSSTTSSIFH
Trigger: GTGGAATATGGAAGAGGTCGTACTGGAGGAGCTTCAGGTATTCAAGCACCCAACAGCTATCTTGAACATGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030868.11
ENSMUST00000197927.2
CDS TCA 72 bp GTAGCTACTGATCTCTGGAGCTCATCGAGGTCTCTGTaGTGTCGTCGATTTCGTTTCTTCTTCATTTCCTGC +
Preference number: 6 (lower is better)
Translates to: VATDLWSSSRSL*CRRFRFFFISC
Trigger: GCAGGAAATGAAGAAGAAACGAAATCGACGACATCACAGAGACCTCGATGAGCTCCAGAGATCAGTAGCTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030868.11
CDS GCA 72 bp ACCAATCCATCCCAGGAACCAACGTACAACTGTTGCTaGTTCAGCGACAACTCCATGTTCAAGATAGCTGTT +
Preference number: 6 (lower is better)
Translates to: TNPSQEPTYNCC*FSDNSMFKIAV
Trigger: AACAGCTATCTTGAACATGGAGTTGTCGCTGAAGCAGCAACAGTTGTACGTTGGTTCCTGGGATGGATTGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030868.11
ENSMUST00000197927.2
CDS CCA 72 bp CCTCCAGTACGACCTCTTCCATATTCCACTTCTCCTTaGAGATGCTCACAACTTTCAGGACTGTTCCAATGT +
Preference number: 6 (lower is better)
Translates to: PPVRPLPYSTSP*RCSQLSGLFQC
Trigger: ACATTGGAACAGTCCTGAAAGTTGTGAGCATCTCCAAGGAGAAGTGGAATATGGAAGAGGTCGTACTGGAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030868.11
ENSMUST00000197927.2
CDS TCA 72 bp TCCGATAAATTTTGCTCCATTGAGCCAGTGGTGCTCTaGAATGTCAGTTCTGATGGAATGGTGGTCCTGCAT +
Preference number: 6 (lower is better)
Translates to: SDKFCSIEPVVL*NVSSDGMVVLH
Trigger: ATGCAGGACCACCATTCCATCAGAACTGACATTTCAGAGCACCACTGGCTCAATGGAGCAAAATTTATCGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030868.11
ENSMUST00000197927.2
CDS GCA 72 bp GTACGACCTCTTCCATATTCCACTTCTCCTTGGAGATaGTCACAACTTTCAGGACTGTTCCAATGTCTGTTC +
Preference number: 6 (lower is better)
Translates to: VRPLPYSTSPWR*SQLSGLFQCLF
Trigger: GAACAGACATTGGAACAGTCCTGAAAGTTGTGAGCATCTCCAAGGAGAAGTGGAATATGGAAGAGGTCGTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030868.11
ENSMUST00000197927.2
CDS GCA 72 bp CAGCTTCACTATGGTGTGGATGAAAGTGTGCTCCTGTaGTTTGCAGTAATACATCCCAGAATCCTTCTTCTG +
Preference number: 6 (lower is better)
Translates to: QLHYGVDESVLL*FAVIHPRILLL
Trigger: CAGAAGAAGGATTCTGGGATGTATTACTGCAAAGCACAGGAGCACACTTTCATCCACACCATAGTGAAGCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030868.11
CDS GCA 72 bp TCAAAGGGACATTTCAGTCTGCCAGACTCCAGGTTGTaGGTGTCTAGTTTAAATATGAGTTCCTCCTTGTTG +
Preference number: 6 (lower is better)
Translates to: SKGHFSLPDSRL*VSSLNMSSSLL
Trigger: CAACAAGGAGGAACTCATATTTAAACTAGACACGCACAACCTGGAGTCTGGCAGACTGAAATGTCCCTTTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030868.11
ENSMUST00000197927.2
CDS CCA 72 bp CCTGACCGCTGGATGTACCACTCAACAGAGGCTTGTTaGGATTTAGGTATACACTCCAAAAAGGTTGAATTA +
Preference number: 6 (lower is better)
Translates to: PDRWMYHSTEAC*DLGIHSKKVEL
Trigger: TAATTCAACCTTTTTGGAGTGTATACCTAAATCCCAACAAGCCTCTGTTGAGTGGTACATCCAGCGGTCAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000030868.11
ENSMUST00000197927.2
CDS CAA 90 bp AAACGCTCCAGTTCCACACACGTAAACGTGAGTCTTATTATAGGGTaGAAGCACACGGATGAAATTTGCACATTCTGCATTGGCATCTTT +
Preference number: 6 (lower is better)
Translates to: KRSSSTHVNVSLIIG*KHTDEICTFCIGIF
Trigger: AAAGATGCCAATGCAGAATGTGCAAATTTCATCCGTGTGCTTCAACCCTATAATAAGACTCACGTTTACGTGTGTGGAACTGGAGCGTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030868.11
ENSMUST00000197927.2
CDS GCA 72 bp CATCATTCTTACAAACTCTTCCAACTCTTGAAAGAATaGTTCTGTCAGAAGTACTGCCTTCCTGGGATGATT +
Preference number: 6 (lower is better)
Translates to: HHSYKLFQLLKE*FCQKYCLPGMI
Trigger: AATCATCCCAGGAAGGCAGTACTTCTGACAGAAGCATTCTTTCAAGAGTTGGAAGAGTTTGTAAGAATGATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030868.11
ENSMUST00000197927.2
CDS CAA 72 bp AGTTCCACACACGTAAACGTGAGTCTTATTATAGGGTaGAAGCACACGGATGAAATTTGCACATTCTGCATT +
Preference number: 6 (lower is better)
Translates to: SSTHVNVSLIIG*KHTDEICTFCI
Trigger: AATGCAGAATGTGCAAATTTCATCCGTGTGCTTCAACCCTATAATAAGACTCACGTTTACGTGTGTGGAACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030868.11
ENSMUST00000197927.2