Pregenerated sensors for SEMA3C (Mus musculus)
Ensembl gene IDs: ENSMUSG00000028780Ensembl transcript IDs: ENSMUST00000030568.14, ENSMUST00000169603.2, ENSMUST00000170181.8
Found 193 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TTTGAAGAAGAAATAGACCTTAGCATCATTTGGATCAGTGCCATCTaGGATCACATGTGCGTCCACAAACATGGGTTCACTCAGCCATTT | + |
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Preference number: 1 (lower is better) Translates to: FEEEIDLSIIWISAI*DHMCVHKHGFTQPF Trigger: AAATGGCTGAGTGAACCCATGTTTGTGGACGCACATGTGATCCCAGATGGCACTGATCCAAATGATGCTAAGGTCTATTTCTTCTTCAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170181.8 |
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| 3UTR TCA 90 bp | CGTTGTCCACCAGTGTCATTAGGGCATATTCTTGCAATCATGGAATaGATCTGTTTTGTGCTCCTATTGTTGTCAGTCAGTCTTTCTTTG | + |
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Preference number: 1 (lower is better) Translates to: RCPPVSLGHILAIME*ICFVLLLLSVSLSL Trigger: CAAAGAAAGACTGACTGACAACAATAGGAGCACAAAACAGATTCATTCCATGATTGCAAGAATATGCCCTAATGACACTGGTGGACAACG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170181.8 |
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| 3UTR-3UTR CCA 90 bp | TGTGGTGAAGATGCCATACACGAGTGTTGTCCTTGGATTGTCAGTTTCCAGCAGGACCTTAGCATCATTTaGATCAGTGCCATCTGGGAT | + |
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Preference number: 2 (lower is better) Translates to: CGEDAIHECCPWIVSFQQDLSII*ISAIWD Trigger: ATCCCAGATGGCACTGATCCAAATGATGCTAAGGTC...CTGCTGGAAACTGACAATCCAAGGACAACACTCGTGTATGGCATCTTCACCACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170181.8 |
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| 3UTR-3UTR CCA 90 bp | AGACAGCTTCATCATGCTAAGTCTATTCACGAACCTACATTTTGGAGGAAAAGTGCACAGGGAAATTTATaGCCCTCGCTCAACCGAGGC | + |
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Preference number: 2 (lower is better) Translates to: RQLHHAKSIHEPTFWRKSAQGNL*PSLNRG Trigger: GCCTCGGTTGAGCGAGGGCCATAAATTTCCCTGTGC...ACTTTTCCTCCAAAATGTAGGTTCGTGAATAGACTTAGCATGATGAAGCTGTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030568.14 |
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| 3UTR-3UTR GCA 90 bp | AAACCAACCCAGGAGGTACTAAATAGAACAAATAATAGCCAAGTGGCTGGCAGTGTTCTTTTTCCTGCTTaGCCTCCTTCCTTGGTGTCT | + |
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Preference number: 2 (lower is better) Translates to: KPTQEVLNRTNNSQVAGSVLFPA*PPSLVS Trigger: AGACACCAAGGAAGGAGGGCAAGCAGGAAAAAGAAC...ACTGCCAGCCACTTGGCTATTATTTGTTCTATTTAGTACCTCCTGGGTTGGTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030568.14 |
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| 3UTR-3UTR GCA 90 bp | CAGTTTCCAGCAGAAAGACATCCTCTAGTTCATCAAAATGTGTCTCTGGGCCATCATCATTTGGATCAGTaGCATCTGGGATCACATGTG | + |
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Preference number: 2 (lower is better) Translates to: QFPAERHPLVHQNVSLGHHHLDQ*HLGSHV Trigger: CACATGTGATCCCAGATGGCACTGATCCAAATGATG...ATGGCCCAGAGACACATTTTGATGAACTAGAGGATGTCTTTCTGCTGGAAACTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170181.8 |
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| 3UTR CAA 90 bp | TCTGTGACTGAGCATACAAGTCTTGCCTTTAAGAATGTGGTCCACTaGTTGACAAGACTACGTTGTCCACCAGTGTCATTAGGGCATATT | + |
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Preference number: 2 (lower is better) Translates to: SVTEHTSLAFKNVVH*LTRLRCPPVSLGHI Trigger: AATATGCCCTAATGACACTGGTGGACAACGTAGTCTTGTCAACAAGTGGACCACATTCTTAAAGGCAAGACTTGTATGCTCAGTCACAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170181.8 |
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| 3UTR CAA 90 bp | GAGCTTGATGTGGTGAAGATGCCATACACGAGTGTTGTCCTTGGATaGTCAGTTTCCAGCAGAAAGACATCCTCTAGTTCATCAAAATGT | + |
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Preference number: 2 (lower is better) Translates to: ELDVVKMPYTSVVLG*SVSSRKTSSSSSKC Trigger: ACATTTTGATGAACTAGAGGATGTCTTTCTGCTGGAAACTGACAATCCAAGGACAACACTCGTGTATGGCATCTTCACCACATCAAGCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170181.8 |
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| 3UTR-3UTR TCA 90 bp | AGGATATGGGATTCTACCTTGATAGGAGATCAGCTGGTGATTGGGCCCTTCCTTGTCTATATACATTCCTaGGAAGAGTTCCTCATTGAT | + |
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Preference number: 2 (lower is better) Translates to: RIWDSTLIGDQLVIGPFLVYIHS*EEFLID Trigger: ATCAATGAGGAACTCTTCTCAGGAATGTATATAGAC...AAGGAAGGGCCCAATCACCAGCTGATCTCCTATCAAGGTAGAATCCCATATCCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170181.8 |
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| 3UTR-3UTR TCA 90 bp | GTCCACTTGTTGACAAGACTACGTTGTCCACCAGTGTCATTAGGGCATATTCTTCAGCATCTGTTCCCATaGAGTCTATATACATTCCTG | + |
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Preference number: 2 (lower is better) Translates to: VHLLTRLRCPPVSLGHILQHLFP*SLYTFL Trigger: CAGGAATGTATATAGACTTCATGGGAACAGATGCTG...AAGAATATGCCCTAATGACACTGGTGGACAACGTAGTCTTGTCAACAAGTGGAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170181.8 |
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| 3UTR CAA 90 bp | CACTGGAAGCATATGAACTCATCACTTGCTCTTTATGAGTCACTCTaGACTTTACGTAACATCTGGATGCTCTCTTCCCTGTCATTTGTG | + |
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Preference number: 2 (lower is better) Translates to: HWKHMNSSLALYESL*TLRNIWMLSSLSFV Trigger: CACAAATGACAGGGAAGAGAGCATCCAGATGTTACGTAAAGTCAAGAGTGACTCATAAAGAGCAAGTGATGAGTTCATATGCTTCCAGTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030568.14 |
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| 3UTR-3UTR GCA 90 bp | AAACCAACCCAGGAGGTACTAAATAGAACAAATAATAGCCAAGTGGCTGGCAGTTACGTAACATCTGGATaGTCTCTTCCCTGTCATTTG | + |
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Preference number: 2 (lower is better) Translates to: KPTQEVLNRTNNSQVAGSYVTSG*SLPCHL Trigger: CAAATGACAGGGAAGAGAGCATCCAGATGTTACGTA...ACTGCCAGCCACTTGGCTATTATTTGTTCTATTTAGTACCTCCTGGGTTGGTTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030568.14 |
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| 3UTR-3UTR TCA 90 bp | ACTTACACTCCTATCCATAGTTTTACTTCCTGCAGGTTTTTCCACAGCATTATACAAGAGAACAAACATTaGTGGCAGCTATCAGCAGCC | + |
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Preference number: 2 (lower is better) Translates to: TYTPIHSFTSCRFFHSIIQENKH*WQLSAA Trigger: GGCTGCTGATAGCTGCCATCAATGTTTGTTCTCTTG...TATAATGCTGTGGAAAAACCTGCAGGAAGTAAAACTATGGATAGGAGTGTAAGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030568.14 |
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| 3UTR-3UTR GCA 90 bp | CTACCAACTTACACTCCTATCCATAGTTTTACTTCCTGCAGGTTTTTCCACAGCTGGATAGCTTCACTCTaGATGGAAAAGTTGAATGCT | + |
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Preference number: 2 (lower is better) Translates to: LPTYTPIHSFTSCRFFHSWIASL*MEKLNA Trigger: AGCATTCAACTTTTCCATGCAGAGTGAAGCTATCCA...GCTGTGGAAAAACCTGCAGGAAGTAAAACTATGGATAGGAGTGTAAGTTGGTAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000030568.14 |
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| 3UTR-3UTR GCA 90 bp | AGACAGCTTCATCATGCTAAGTCTATTCACGAACCTACATTTTGGAGGAAAAGTTTGGCCGGGCTATGCTaGACAGCAATTTCTATATCT | + |
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Preference number: 2 (lower is better) Translates to: RQLHHAKSIHEPTFWRKSLAGLC*TAISIS Trigger: AGATATAGAAATTGCTGTGCAGCATAGCCCGGCCAA...ACTTTTCCTCCAAAATGTAGGTTCGTGAATAGACTTAGCATGATGAAGCTGTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030568.14 |
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| 3UTR-3UTR GCA 90 bp | AAACCAACCCAGGAGGTACTAAATAGAACAAATAATAGCCAAGTGGCTGGCAGTCATAGTTTTACTTCCTaGAGGTTTTTCCACAGCATT | + |
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Preference number: 2 (lower is better) Translates to: KPTQEVLNRTNNSQVAGSHSFTS*RFFHSI Trigger: AATGCTGTGGAAAAACCTGCAGGAAGTAAAACTATG...ACTGCCAGCCACTTGGCTATTATTTGTTCTATTTAGTACCTCCTGGGTTGGTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030568.14 |
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| 3UTR-3UTR GCA 90 bp | ACGAGTGTTGTCCTTGGATTGTCAGTTTCCAGCAGAAAGACATCCTCTAGTTCAAATGAATCTGTTTTGTaGTCCTATTGTTGTCAGTCA | + |
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Preference number: 2 (lower is better) Translates to: TSVVLGLSVSSRKTSSSSNESVL*SYCCQS Trigger: TGACTGACAACAATAGGAGCACAAAACAGATTCATT...TGAACTAGAGGATGTCTTTCTGCTGGAAACTGACAATCCAAGGACAACACTCGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170181.8 |
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| 3UTR-3UTR CCA 90 bp | ATAGATCTCCCATCAAAGGCCTTGGATGGTACAGGCCATTTCTTTTGTTTTTCTCAGAGCATTTGTTCCTaGAAGCAAAACTTCATGGAT | + |
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Preference number: 2 (lower is better) Translates to: IDLPSKALDGTGHFFCFSQSICS*KQNFMD Trigger: ATCCATGAAGTTTTGCTTCCAGGAACAAATGCTCTG...AGAAAAACAAAAGAAATGGCCTGTACCATCCAAGGCCTTTGATGGGAGATCTAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000030568.14 |
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| 3UTR-3UTR TCA 90 bp | ATAGATCTCCCATCAAAGGCCTTGGATGGTACAGGCCATTTCTTTTGTTTTTCTTTTATGAGTCACTCTTaGCTTTACGTAACATCTGGA | + |
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Preference number: 2 (lower is better) Translates to: IDLPSKALDGTGHFFCFSFMSHS*LYVTSG Trigger: TCCAGATGTTACGTAAAGTCAAGAGTGACTCATAAA...AGAAAAACAAAAGAAATGGCCTGTACCATCCAAGGCCTTTGATGGGAGATCTAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000030568.14 |
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| 3UTR-3UTR CCA 90 bp | TTCCCTTTGGATAGCTTCACTCTGCATGGAAAAGTTGAATGCTTTAATAATACTACTTTACGTAACATCTaGATGCTCTCTTCCCTGTCA | + |
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Preference number: 2 (lower is better) Translates to: FPLDSFTLHGKVECFNNTTLRNI*MLSSLS Trigger: TGACAGGGAAGAGAGCATCCAGATGTTACGTAAAGT...AGTATTATTAAAGCATTCAACTTTTCCATGCAGAGTGAAGCTATCCAAAGGGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030568.14 |
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| 3UTR-3UTR TCA 90 bp | ACTTACACTCCTATCCATAGTTTTACTTCCTGCAGGTTTTTCCACAGCATTATAAATCATTATGCTTTGTaGAACTGGTTCCTTGGATGT | + |
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Preference number: 2 (lower is better) Translates to: TYTPIHSFTSCRFFHSIINHYAL*NWFLGC Trigger: ACATCCAAGGAACCAGTTTCACAAAGCATAATGATT...TATAATGCTGTGGAAAAACCTGCAGGAAGTAAAACTATGGATAGGAGTGTAAGT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030568.14 |
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| 3UTR-3UTR GCA 90 bp | AGACAGCTTCATCATGCTAAGTCTATTCACGAACCTACATTTTGGAGGAAAAGTCCTGAAAAATCATTATaGTTTGTGAAACTGGTTCCT | + |
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Preference number: 2 (lower is better) Translates to: RQLHHAKSIHEPTFWRKSPEKSL*FVKLVP Trigger: AGGAACCAGTTTCACAAAGCATAATGATTTTTCAGG...ACTTTTCCTCCAAAATGTAGGTTCGTGAATAGACTTAGCATGATGAAGCTGTCT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000030568.14 |
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| 3UTR GCA 72 bp | TGCCCTTCTTCTCTCCAGTCAGTCTGTTCTTTTTCCTaGTTGCCCTCCTTCCTTGGTGTCTTTCTTCCTTTC | + |
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Preference number: 3 (lower is better) Translates to: CPSSLQSVCSFS*LPSFLGVFLPF Trigger: GAAAGGAAGAAAGACACCAAGGAAGGAGGGCAAGCAGGAAAAAGAACAGACTGACTGGAGAGAAGAAGGGCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030568.14 |
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| 3UTR-3UTR CAA 90 bp | GTCCACTTGTTGACAAGACTACGTTGTCCACCAGTGTCATTAGGGCATATTCTTGTGTTCACATTCGGGTaGAAAGAGCATCGTCCTTTG | + |
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Preference number: 3 (lower is better) Translates to: VHLLTRLRCPPVSLGHILVFTFG*KEHRPL Trigger: CAAAGGACGATGCTCTTTCAACCCGAATGTGAACAC...AAGAATATGCCCTAATGACACTGGTGGACAACGTAGTCTTGTCAACAAGTGGAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170181.8 |
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| 3UTR CCA 72 bp | GAAATAGACCTTAGCATCATTTGGATCAGTGCCATCTaGGATCACATGTGCGTCCACAAACATGGGTTCACT | + |
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Preference number: 3 (lower is better) Translates to: EIDLSIIWISAI*DHMCVHKHGFT Trigger: AGTGAACCCATGTTTGTGGACGCACATGTGATCCCAGATGGCACTGATCCAAATGATGCTAAGGTCTATTTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170181.8 |
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| 3UTR-3UTR CAA 90 bp | CCCTTAAAAACAGAGCTTGATGTGGTGAAGATGCCATACACGAGTGTTGTCCTTAATGTGGTCCACTTGTaGACAAGACTACGTTGTCCA | + |
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Preference number: 3 (lower is better) Translates to: PLKTELDVVKMPYTSVVLNVVHL*TRLRCP Trigger: TGGACAACGTAGTCTTGTCAACAAGTGGACCACATT...AAGGACAACACTCGTGTATGGCATCTTCACCACATCAAGCTCTGTTTTTAAGGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000170181.8 |
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| 3UTR-3UTR CAA 90 bp | AGACAGCTTCATCATGCTAAGTCTATTCACGAACCTACATTTTGGAGGAAAAGTTGTTCTTTTTCCTGCTaGCCCTCCTTCCTTGGTGTC | + |
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Preference number: 3 (lower is better) Translates to: RQLHHAKSIHEPTFWRKSCSFSC*PSFLGV Trigger: GACACCAAGGAAGGAGGGCAAGCAGGAAAAAGAACA...ACTTTTCCTCCAAAATGTAGGTTCGTGAATAGACTTAGCATGATGAAGCTGTCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000030568.14 |
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| 3UTR-3UTR CAA 90 bp | CTACCAACTTACACTCCTATCCATAGTTTTACTTCCTGCAGGTTTTTCCACAGCATCTTCCTTTTCCCTTaGGATAGCTTCACTCTGCAT | + |
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Preference number: 3 (lower is better) Translates to: LPTYTPIHSFTSCRFFHSIFLFP*DSFTLH Trigger: ATGCAGAGTGAAGCTATCCAAAGGGAAAAGGAAGAT...GCTGTGGAAAAACCTGCAGGAAGTAAAACTATGGATAGGAGTGTAAGTTGGTAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000030568.14 |
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| 3UTR-3UTR CAA 90 bp | GAAGAAGAAATAGACCTTAGCATCATTTGGATCAGTGCCATCTGGGATCACATGGAGAAGAGTTCCTCATaGATCATAACAGACACAGTG | + |
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Preference number: 3 (lower is better) Translates to: EEEIDLSIIWISAIWDHMEKSSS*IITDTV Trigger: CACTGTGTCTGTTATGATCAATGAGGAACTCTTCTC...CATGTGATCCCAGATGGCACTGATCCAAATGATGCTAAGGTCTATTTCTTCTTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170181.8 |
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| 3UTR TCA 72 bp | ATGTGCGTCCACAAACATGGGTTCACTCAGCCATTTTaGATTATGTTGATCAGTTCGAACTGCATTCCTCTT | + |
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Preference number: 3 (lower is better) Translates to: MCVHKHGFTQPF*IMLISSNCIPL Trigger: AAGAGGAATGCAGTTCGAACTGATCAACATAATTCAAAATGGCTGAGTGAACCCATGTTTGTGGACGCACAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170181.8 |
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| 3UTR-3UTR CAA 90 bp | CTACCAACTTACACTCCTATCCATAGTTTTACTTCCTGCAGGTTTTTCCACAGCGCTTCTGTTGTCGCATaGATTTTGAAGAAAAGACAC | + |
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Preference number: 3 (lower is better) Translates to: LPTYTPIHSFTSCRFFHSASVVA*ILKKRH Trigger: GTGTCTTTTCTTCAAAATCAATGCGACAACAGAAGC...GCTGTGGAAAAACCTGCAGGAAGTAAAACTATGGATAGGAGTGTAAGTTGGTAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000030568.14 |
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| 3UTR-3UTR CAA 90 bp | ATAGATCTCCCATCAAAGGCCTTGGATGGTACAGGCCATTTCTTTTGTTTTTCTTCTCTTCCCTGTCATTaGTGTAACCTACATGACACT | + |
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Preference number: 3 (lower is better) Translates to: IDLPSKALDGTGHFFCFSSLPCH*CNLHDT Trigger: AGTGTCATGTAGGTTACACAAATGACAGGGAAGAGA...AGAAAAACAAAAGAAATGGCCTGTACCATCCAAGGCCTTTGATGGGAGATCTAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030568.14 |
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| 3UTR TCA 72 bp | ATGCTCTTTTCAGTTCACAGAGAACACACTTTAGAGTaGGTCTCCAGCTTTTGTCAGAAATTTCTCATGGGT | + |
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Preference number: 3 (lower is better) Translates to: MLFSVHREHTLE*VSSFCQKFLMG Trigger: ACCCATGAGAAATTTCTGACAAAAGCTGGAGACTCACTCTAAAGTGTGTTCTCTGTGAACTGAAAAGAGCAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030568.14 |
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| 3UTR TCA 72 bp | AAGGGCCCATTGAATACAGTCTGTATATCAGATAAATaGTACACACACACTGCCGATCCCTTAAAAACAGAG | + |
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Preference number: 3 (lower is better) Translates to: KGPLNTVCISDK*YTHTADPLKTE Trigger: CTCTGTTTTTAAGGGATCGGCAGTGTGTGTGTATCATTTATCTGATATACAGACTGTATTCAATGGGCCCTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000170181.8 |
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| 3UTR GCA 72 bp | ACTACGTTGTCCACCAGTGTCATTAGGGCATATTCTTaGAATCATGGAATGAATCTGTTTTGTGCTCCTATT | + |
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Preference number: 3 (lower is better) Translates to: TTLSTSVIRAYS*NHGMNLFCAPI Trigger: AATAGGAGCACAAAACAGATTCATTCCATGATTGCAAGAATATGCCCTAATGACACTGGTGGACAACGTAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170181.8 |
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| 3UTR-3UTR CAA 90 bp | TTCCCTTTGGATAGCTTCACTCTGCATGGAAAAGTTGAATGCTTTAATAATACTGTGAGTCTCCAGCTTTaGTCAGAAATTTCTCATGGG | + |
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Preference number: 3 (lower is better) Translates to: FPLDSFTLHGKVECFNNTVSLQL*SEISHG Trigger: CCCATGAGAAATTTCTGACAAAAGCTGGAGACTCAC...AGTATTATTAAAGCATTCAACTTTTCCATGCAGAGTGAAGCTATCCAAAGGGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030568.14 |
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| 3UTR-3UTR CAA 90 bp | AGACAGCTTCATCATGCTAAGTCTATTCACGAACCTACATTTTGGAGGAAAAGTTGTGAAACTGGTTCCTaGGATGTACAAATTACTCCT | + |
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Preference number: 3 (lower is better) Translates to: RQLHHAKSIHEPTFWRKSCETGS*DVQITP Trigger: AGGAGTAATTTGTACATCCAAGGAACCAGTTTCACA...ACTTTTCCTCCAAAATGTAGGTTCGTGAATAGACTTAGCATGATGAAGCTGTCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030568.14 |
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| 3UTR-3UTR CAA 90 bp | TTCCCTTTGGATAGCTTCACTCTGCATGGAAAAGTTGAATGCTTTAATAATACTGTGAAGACAGAGCATTaGTTCCTGGAAGCAAAACTT | + |
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Preference number: 3 (lower is better) Translates to: FPLDSFTLHGKVECFNNTVKTEH*FLEAKL Trigger: AAGTTTTGCTTCCAGGAACAAATGCTCTGTCTTCAC...AGTATTATTAAAGCATTCAACTTTTCCATGCAGAGTGAAGCTATCCAAAGGGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030568.14 |
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| CDS-3UTR GCA 90 bp | AAACCAACCCAGGAGGTACTAAATAGAACAAATAATAGCCAAGTGGCTGGCAGTCCCAGCTGCTGCTGCTaGCGGGTGTCTTTGCAGTAC | + |
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Preference number: 4 (lower is better) Translates to: KPTQEVLNRTNNSQVAGSPSCCC*RVSLQY Trigger: GTACTGCAAAGACACCCGGCAGCAGCAGCAGCTGGG...ACTGCCAGCCACTTGGCTATTATTTGTTCTATTTAGTACCTCCTGGGTTGGTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030568.14 |
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| CDS-3UTR GCA 90 bp | AAACCAACCCAGGAGGTACTAAATAGAACAAATAATAGCCAAGTGGCTGGCAGTTCTTCCCCCAGCTGCTaGTGCTGCCGGGTGTCTTTG | + |
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Preference number: 4 (lower is better) Translates to: KPTQEVLNRTNNSQVAGSSSPSC*CCRVSL Trigger: CAAAGACACCCGGCAGCAGCAGCAGCTGGGGGAAGA...ACTGCCAGCCACTTGGCTATTATTTGTTCTATTTAGTACCTCCTGGGTTGGTTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030568.14 |
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| CDS-3UTR TCA 90 bp | AAACCAACCCAGGAGGTACTAAATAGAACAAATAATAGCCAAGTGGCTGGCAGTGAATACCTGGTCCTCTaGCCTCCTTCCCCGGTTCAG | + |
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Preference number: 4 (lower is better) Translates to: KPTQEVLNRTNNSQVAGSEYLVL*PPSPVQ Trigger: CTGAACCGGGGAAGGAGGTCAGAGGACCAGGTATTC...ACTGCCAGCCACTTGGCTATTATTTGTTCTATTTAGTACCTCCTGGGTTGGTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030568.14 |
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| CDS-3UTR GCA 90 bp | TTTTTATGCACCACAAGGACCATGACATGTCTAGTGCTAGTCTGTATCATACAATCCCCCAGCTGCTGCTaGTGCCGGGTGTCTTTGCAG | + |
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Preference number: 4 (lower is better) Translates to: FLCTTRTMTCLVLVCIIQSPSCC*CRVSLQ Trigger: CTGCAAAGACACCCGGCAGCAGCAGCAGCTGGGGGA...TTGTATGATACAGACTAGCACTAGACATGTCATGGTCCTTGTGGTGCATAAAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000030568.14 |
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| CDS-3UTR GCA 90 bp | AGACAGCTTCATCATGCTAAGTCTATTCACGAACCTACATTTTGGAGGAAAAGTGGTTCTTCCCCCAGCTaGTGCTGCTGCCGGGTGTCT | + |
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Preference number: 4 (lower is better) Translates to: RQLHHAKSIHEPTFWRKSGSSPS*CCCRVS Trigger: AGACACCCGGCAGCAGCAGCAGCTGGGGGAAGAACC...ACTTTTCCTCCAAAATGTAGGTTCGTGAATAGACTTAGCATGATGAAGCTGTCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000030568.14 |
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| CDS-3UTR GCA 90 bp | AAACCAACCCAGGAGGTACTAAATAGAACAAATAATAGCCAAGTGGCTGGCAGTAGTCCGCACAGGCTGTaGCGTAGATATGGCAGCGAT | + |
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Preference number: 4 (lower is better) Translates to: KPTQEVLNRTNNSQVAGSSPHRL*RRYGSD Trigger: ATCGCTGCCATATCTACGGCACAGCCTGTGCGGACT...ACTGCCAGCCACTTGGCTATTATTTGTTCTATTTAGTACCTCCTGGGTTGGTTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030568.14 |
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| CDS-3UTR CCA 90 bp | AAACCAACCCAGGAGGTACTAAATAGAACAAATAATAGCCAAGTGGCTGGCAGTATCCCAGGCACAGTATaGATCCCTCGCCAAGCAGCA | + |
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Preference number: 4 (lower is better) Translates to: KPTQEVLNRTNNSQVAGSIPGTV*IPRQAA Trigger: TGCTGCTTGGCGAGGGATCCATACTGTGCCTGGGAT...ACTGCCAGCCACTTGGCTATTATTTGTTCTATTTAGTACCTCCTGGGTTGGTTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030568.14 |
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| CDS-3UTR CCA 90 bp | ACTTACACTCCTATCCATAGTTTTACTTCCTGCAGGTTTTTCCACAGCATTATACAGGTAGGTGCACACTaGGCTGAACGCTCCACTCCC | + |
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Preference number: 4 (lower is better) Translates to: TYTPIHSFTSCRFFHSIIQVGAH*AERSTP Trigger: GGGAGTGGAGCGTTCAGCCCAGTGTGCACCTACCTG...TATAATGCTGTGGAAAAACCTGCAGGAAGTAAAACTATGGATAGGAGTGTAAGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030568.14 |
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| CDS-3UTR CCA 90 bp | CTACCAACTTACACTCCTATCCATAGTTTTACTTCCTGCAGGTTTTTCCACAGCAGATCAGCTGGTGATTaGGCCCTTCCTTGTGGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: LPTYTPIHSFTSCRFFHSRSAGD*ALPCGQ Trigger: TTGCCCACAAGGAAGGGCCCAATCACCAGCTGATCT...GCTGTGGAAAAACCTGCAGGAAGTAAAACTATGGATAGGAGTGTAAGTTGGTAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030568.14 |
||
| CDS-3UTR TCA 90 bp | CTACCAACTTACACTCCTATCCATAGTTTTACTTCCTGCAGGTTTTTCCACAGCCAGAGCTTGATGTGGTaGAGATGCCATACACGAGTG | + |
|
Preference number: 4 (lower is better) Translates to: LPTYTPIHSFTSCRFFHSQSLMW*RCHTRV Trigger: CACTCGTGTATGGCATCTTCACCACATCAAGCTCTG...GCTGTGGAAAAACCTGCAGGAAGTAAAACTATGGATAGGAGTGTAAGTTGGTAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030568.14 |
||
| CDS-3UTR GCA 90 bp | CTACCAACTTACACTCCTATCCATAGTTTTACTTCCTGCAGGTTTTTCCACAGCCAACCACTTGATAGATaGCTGTGGAGACTTGGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: LPTYTPIHSFTSCRFFHSQPLDR*LWRLGS Trigger: GCTCCCAAGTCTCCACAGGCATCTATCAAGTGGTTG...GCTGTGGAAAAACCTGCAGGAAGTAAAACTATGGATAGGAGTGTAAGTTGGTAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030568.14 |
||
| CDS-3UTR CCA 90 bp | CTACCAACTTACACTCCTATCCATAGTTTTACTTCCTGCAGGTTTTTCCACAGCACTCTTGCTTGGGGCTaGGAAGATCCTCGTACACAA | + |
|
Preference number: 4 (lower is better) Translates to: LPTYTPIHSFTSCRFFHSTLAWG*EDPRTQ Trigger: TTGTGTACGAGGATCTTCCCAGCCCCAAGCAAGAGT...GCTGTGGAAAAACCTGCAGGAAGTAAAACTATGGATAGGAGTGTAAGTTGGTAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000030568.14 |
||
| CDS-3UTR CCA 90 bp | AAACCAACCCAGGAGGTACTAAATAGAACAAATAATAGCCAAGTGGCTGGCAGTATGCCTGTGGAGACTTaGGAGCACACTCAAGGAAAG | + |
|
Preference number: 4 (lower is better) Translates to: KPTQEVLNRTNNSQVAGSMPVET*EHTQGK Trigger: CTTTCCTTGAGTGTGCTCCCAAGTCTCCACAGGCAT...ACTGCCAGCCACTTGGCTATTATTTGTTCTATTTAGTACCTCCTGGGTTGGTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030568.14 |
||
| CDS-3UTR CCA 90 bp | CTACCAACTTACACTCCTATCCATAGTTTTACTTCCTGCAGGTTTTTCCACAGCCTTGATAGATGCCTGTaGAGACTTGGGAGCACACTC | + |
|
Preference number: 4 (lower is better) Translates to: LPTYTPIHSFTSCRFFHSLDRCL*RLGSTL Trigger: GAGTGTGCTCCCAAGTCTCCACAGGCATCTATCAAG...GCTGTGGAAAAACCTGCAGGAAGTAAAACTATGGATAGGAGTGTAAGTTGGTAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030568.14 |
||
| CDS-3UTR CCA 90 bp | AGACAGCTTCATCATGCTAAGTCTATTCACGAACCTACATTTTGGAGGAAAAGTCCCTCTCATCTTCTGTaGTTCTTCCCCCAGCTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: RQLHHAKSIHEPTFWRKSPSHLL*FFPQLL Trigger: CAGCAGCTGGGGGAAGAACCACAGAAGATGAGAGGG...ACTTTTCCTCCAAAATGTAGGTTCGTGAATAGACTTAGCATGATGAAGCTGTCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000030568.14 |
||
| 3UTR CAA 72 bp | GTGGTGAAGATGCCATACACGAGTGTTGTCCTTGGATaGTCAGTTTCCAGCAGAAAGACATCCTCTAGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: VVKMPYTSVVLG*SVSSRKTSSSS Trigger: TGAACTAGAGGATGTCTTTCTGCTGGAAACTGACAATCCAAGGACAACACTCGTGTATGGCATCTTCACCAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170181.8 |
||
| CDS-3UTR TCA 90 bp | AAACCAACCCAGGAGGTACTAAATAGAACAAATAATAGCCAAGTGGCTGGCAGTTGGGAACATGATTCTTaGAGACTTCCAGCTCCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: KPTQEVLNRTNNSQVAGSWEHDS*RLPAPP Trigger: TGGAGGAGCTGGAAGTCTTCAAGAATCATGTTCCCA...ACTGCCAGCCACTTGGCTATTATTTGTTCTATTTAGTACCTCCTGGGTTGGTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030568.14 |
||
| CDS-3UTR CCA 90 bp | ATTGATCATAACAGACACAGTGTTCACATTCGGGTTGAAAGAGCATCGTCCTTTACTCTTGCTTGGGGCTaGGAAGATCCTCGTACACAA | + |
|
Preference number: 4 (lower is better) Translates to: IDHNRHSVHIRVERASSFTLAWG*EDPRTQ Trigger: TTGTGTACGAGGATCTTCCCAGCCCCAAGCAAGAGT...AAAGGACGATGCTCTTTCAACCCGAATGTGAACACTGTGTCTGTTATGATCAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170181.8 |
||
| CDS-3UTR CCA 90 bp | ACTTACACTCCTATCCATAGTTTTACTTCCTGCAGGTTTTTCCACAGCATTATAAGCTGCATTTCCGAGTaGCTGAATGCCCCCAGGATG | + |
|
Preference number: 4 (lower is better) Translates to: TYTPIHSFTSCRFFHSIISCISE*LNAPRM Trigger: CATCCTGGGGGCATTCAGCCACTCGGAAATGCAGCT...TATAATGCTGTGGAAAAACCTGCAGGAAGTAAAACTATGGATAGGAGTGTAAGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000030568.14 |
||
| CDS-3UTR TCA 90 bp | AAACCAACCCAGGAGGTACTAAATAGAACAAATAATAGCCAAGTGGCTGGCAGTTGCACTCTTCAACTTTaGTTGTTGATGCTGGCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: KPTQEVLNRTNNSQVAGSCTLQL*LLMLAR Trigger: TCTGGCCAGCATCAACAATCAAAGTTGAAGAGTGCA...ACTGCCAGCCACTTGGCTATTATTTGTTCTATTTAGTACCTCCTGGGTTGGTTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030568.14 |
||
| CDS-3UTR TCA 90 bp | TTCCCTTTGGATAGCTTCACTCTGCATGGAAAAGTTGAATGCTTTAATAATACTTCCCATCAGCAGCGTTaGCACGGTCCACAGCAATCT | + |
|
Preference number: 4 (lower is better) Translates to: FPLDSFTLHGKVECFNNTSHQQR*HGPQQS Trigger: AGATTGCTGTGGACCGTGTCAACGCTGCTGATGGGA...AGTATTATTAAAGCATTCAACTTTTCCATGCAGAGTGAAGCTATCCAAAGGGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030568.14 |
||
| CDS-3UTR TCA 90 bp | CTACCAACTTACACTCCTATCCATAGTTTTACTTCCTGCAGGTTTTTCCACAGCGTGTCTTTGCAGTACTaGTTGATGAGCTGCATTTCC | + |
|
Preference number: 4 (lower is better) Translates to: LPTYTPIHSFTSCRFFHSVSLQY*LMSCIS Trigger: GGAAATGCAGCTCATCAATCAGTACTGCAAAGACAC...GCTGTGGAAAAACCTGCAGGAAGTAAAACTATGGATAGGAGTGTAAGTTGGTAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030568.14 |
||
| CDS-3UTR GCA 90 bp | AAACCAACCCAGGAGGTACTAAATAGAACAAATAATAGCCAAGTGGCTGGCAGTCATCATTTGGATCAGTaGCATCTGGGATCACATGTG | + |
|
Preference number: 4 (lower is better) Translates to: KPTQEVLNRTNNSQVAGSHHLDQ*HLGSHV Trigger: CACATGTGATCCCAGATGGCACTGATCCAAATGATG...ACTGCCAGCCACTTGGCTATTATTTGTTCTATTTAGTACCTCCTGGGTTGGTTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030568.14 |
||
| CDS-3UTR GCA 90 bp | TTTTTATGCACCACAAGGACCATGACATGTCTAGTGCTAGTCTGTATCATACAATGTAGTCAGTGCCTATaGGGACTATCAGAGGCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: FLCTTRTMTCLVLVCIIQCSQCL*GLSEAF Trigger: GAAGGCCTCTGATAGTCCGCATAGGCACTGACTACA...TTGTATGATACAGACTAGCACTAGACATGTCATGGTCCTTGTGGTGCATAAAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030568.14 |
||
| CDS-3UTR GCA 90 bp | TGTAACCTACATGACACTGGATGTCACACACATTTATATGACATTTACTATGTGTTCCGAGTGGCTGAATaGCCCCAGGATGTCCTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: CNLHDTGCHTHLYDIYYVFRVAE*PQDVLW Trigger: CCAAAGGACATCCTGGGGGCATTCAGCCACTCGGAA...CACATAGTAAATGTCATATAAATGTGTGTGACATCCAGTGTCATGTAGGTTACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030568.14 |
||
| CDS-3UTR CCA 90 bp | ACTTACACTCCTATCCATAGTTTTACTTCCTGCAGGTTTTTCCACAGCATTATATCCTGGGCAAGTTCCTaGGCGAGGATATGGGATTCT | + |
|
Preference number: 4 (lower is better) Translates to: TYTPIHSFTSCRFFHSIISWASS*ARIWDS Trigger: AGAATCCCATATCCTCGCCCAGGAACTTGCCCAGGA...TATAATGCTGTGGAAAAACCTGCAGGAAGTAAAACTATGGATAGGAGTGTAAGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030568.14 |
||
| CDS-3UTR CCA 90 bp | ATAGATCTCCCATCAAAGGCCTTGGATGGTACAGGCCATTTCTTTTGTTTTTCTTCGGCATTGTGTCAGTaGGTTTCCATGTCTCACATC | + |
|
Preference number: 4 (lower is better) Translates to: IDLPSKALDGTGHFFCFSSALCQ*VSMSHI Trigger: GATGTGAGACATGGAAACCCACTGACACAATGCCGA...AGAAAAACAAAAGAAATGGCCTGTACCATCCAAGGCCTTTGATGGGAGATCTAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030568.14 |
||
| 3UTR CAA 72 bp | CTAAATAGAACAAATAATAGCCAAGTGGCTGGCAGTTaGAAGGTAAGTGGAGCAAGGGGAAGTAGCTGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: LNRTNNSQVAGS*KVSGARGSSCF Trigger: GAAACAGCTACTTCCCCTTGCTCCACTTACCTTCAAACTGCCAGCCACTTGGCTATTATTTGTTCTATTTAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030568.14 |
||
| 3UTR CAA 72 bp | GAGCATACAAGTCTTGCCTTTAAGAATGTGGTCCACTaGTTGACAAGACTACGTTGTCCACCAGTGTCATTA | + |
|
Preference number: 4 (lower is better) Translates to: EHTSLAFKNVVH*LTRLRCPPVSL Trigger: TAATGACACTGGTGGACAACGTAGTCTTGTCAACAAGTGGACCACATTCTTAAAGGCAAGACTTGTATGCTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170181.8 |
||
| CDS-3UTR TCA 90 bp | AAACCAACCCAGGAGGTACTAAATAGAACAAATAATAGCCAAGTGGCTGGCAGTCAGCATCTGTTCCCATaGAGTCTATATACATTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: KPTQEVLNRTNNSQVAGSQHLFP*SLYTFL Trigger: CAGGAATGTATATAGACTTCATGGGAACAGATGCTG...ACTGCCAGCCACTTGGCTATTATTTGTTCTATTTAGTACCTCCTGGGTTGGTTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030568.14 |
||
| CDS-3UTR TCA 90 bp | TTTTTATGCACCACAAGGACCATGACATGTCTAGTGCTAGTCTGTATCATACAAGGCCATCTTCATCTGTaGCTGAGCATACAAGTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: FLCTTRTMTCLVLVCIIQGHLHL*LSIQVL Trigger: CAAGACTTGTATGCTCAGTCACAGATGAAGATGGCC...TTGTATGATACAGACTAGCACTAGACATGTCATGGTCCTTGTGGTGCATAAAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030568.14 |
||
| CDS-3UTR TCA 90 bp | AGACAGCTTCATCATGCTAAGTCTATTCACGAACCTACATTTTGGAGGAAAAGTGGGCAAAGGGCCCATTaGATACAGTCTGTATATCAG | + |
|
Preference number: 4 (lower is better) Translates to: RQLHHAKSIHEPTFWRKSGQRAH*IQSVYQ Trigger: CTGATATACAGACTGTATTCAATGGGCCCTTTGCCC...ACTTTTCCTCCAAAATGTAGGTTCGTGAATAGACTTAGCATGATGAAGCTGTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030568.14 |
||
| CDS-3UTR TCA 90 bp | ATAGATCTCCCATCAAAGGCCTTGGATGGTACAGGCCATTTCTTTTGTTTTTCTCCTTGGTCAGAATCTTaGACAGAGCGAATCAGTAGT | + |
|
Preference number: 4 (lower is better) Translates to: IDLPSKALDGTGHFFCFSPWSES*TERISS Trigger: ACTACTGATTCGCTCTGTTCAAGATTCTGACCAAGG...AGAAAAACAAAAGAAATGGCCTGTACCATCCAAGGCCTTTGATGGGAGATCTAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030568.14 |
||
| CDS-3UTR GCA 90 bp | TTTTTATGCACCACAAGGACCATGACATGTCTAGTGCTAGTCTGTATCATACAAACAGGATGTGGTCTTTaGTCCCCACATATATCCGGT | + |
|
Preference number: 4 (lower is better) Translates to: FLCTTRTMTCLVLVCIIQTGCGL*SPHISG Trigger: ACCGGATATATGTGGGGAGCAAAGACCACATCCTGT...TTGTATGATACAGACTAGCACTAGACATGTCATGGTCCTTGTGGTGCATAAAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030568.14 |
||
| CDS-3UTR GCA 90 bp | CTACCAACTTACACTCCTATCCATAGTTTTACTTCCTGCAGGTTTTTCCACAGCAGCTGCATTTCTGTATaGTTTCAGATTGAACCCTCG | + |
|
Preference number: 4 (lower is better) Translates to: LPTYTPIHSFTSCRFFHSSCISV*FQIEPS Trigger: CGAGGGTTCAATCTGAAAGCATACAGAAATGCAGCT...GCTGTGGAAAAACCTGCAGGAAGTAAAACTATGGATAGGAGTGTAAGTTGGTAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030568.14 |
||
| CDS-3UTR CCA 90 bp | AGACAGCTTCATCATGCTAAGTCTATTCACGAACCTACATTTTGGAGGAAAAGTCATCTGGGAAGTCCTTaGTGGTTCTCATATTGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: RQLHHAKSIHEPTFWRKSHLGSP*WFSYWV Trigger: CACCCAATATGAGAACCACCAAGGACTTCCCAGATG...ACTTTTCCTCCAAAATGTAGGTTCGTGAATAGACTTAGCATGATGAAGCTGTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030568.14 |
||
| CDS-3UTR CCA 90 bp | TGTAACCTACATGACACTGGATGTCACACACATTTATATGACATTTACTATGTGCCCAGAAACAGAACGTaGTATCTCCCATCAGCAGCG | + |
|
Preference number: 4 (lower is better) Translates to: CNLHDTGCHTHLYDIYYVPRNRT*YLPSAA Trigger: CGCTGCTGATGGGAGATACCACGTTCTGTTTCTGGG...CACATAGTAAATGTCATATAAATGTGTGTGACATCCAGTGTCATGTAGGTTACA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030568.14 |
||
| 3UTR CAA 72 bp | CATATGAACTCATCACTTGCTCTTTATGAGTCACTCTaGACTTTACGTAACATCTGGATGCTCTCTTCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: HMNSSLALYESL*TLRNIWMLSSL Trigger: CAGGGAAGAGAGCATCCAGATGTTACGTAAAGTCAAGAGTGACTCATAAAGAGCAAGTGATGAGTTCATATG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030568.14 |
||
| 3UTR CAA 72 bp | GTCAATGGCTCACTGATAGATCTCCCATCAAAGGCCTaGGATGGTACAGGCCATTTCTTTTGTTTTTCTAAA | + |
|
Preference number: 4 (lower is better) Translates to: VNGSLIDLPSKA*DGTGHFFCFSK Trigger: TTTAGAAAAACAAAAGAAATGGCCTGTACCATCCAAGGCCTTTGATGGGAGATCTATCAGTGAGCCATTGAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030568.14 |
||
| CDS-3UTR TCA 90 bp | ACTTACACTCCTATCCATAGTTTTACTTCCTGCAGGTTTTTCCACAGCATTATAATGTGGTCCACTTGTTaGCAAGACTACGTTGTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: TYTPIHSFTSCRFFHSIIMWSTC*QDYVVH Trigger: GTGGACAACGTAGTCTTGTCAACAAGTGGACCACAT...TATAATGCTGTGGAAAAACCTGCAGGAAGTAAAACTATGGATAGGAGTGTAAGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030568.14 |
||
| CDS-3UTR TCA 90 bp | TTTTTATGCACCACAAGGACCATGACATGTCTAGTGCTAGTCTGTATCATACAATATGACTCTGGAAGCTaGTTCCTCCTGTTTCTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: FLCTTRTMTCLVLVCIIQYDSGS*FLLFLL Trigger: AAGCAGAAACAGGAGGAATCAGCTTCCAGAGTCATA...TTGTATGATACAGACTAGCACTAGACATGTCATGGTCCTTGTGGTGCATAAAAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030568.14 |
||
| CDS-3UTR CCA 90 bp | ATAGATCTCCCATCAAAGGCCTTGGATGGTACAGGCCATTTCTTTTGTTTTTCTTTCAAAGACAGGATGTaGTCTTTGCTCCCCACATAT | + |
|
Preference number: 4 (lower is better) Translates to: IDLPSKALDGTGHFFCFSFKDRM*SLLPTY Trigger: ATATGTGGGGAGCAAAGACCACATCCTGTCTTTGAA...AGAAAAACAAAAGAAATGGCCTGTACCATCCAAGGCCTTTGATGGGAGATCTAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000030568.14 |
||
| CDS-3UTR CCA 90 bp | AGACAGCTTCATCATGCTAAGTCTATTCACGAACCTACATTTTGGAGGAAAAGTGACCTTAGCATCATTTaGATCAGTGCCATCTGGGAT | + |
|
Preference number: 4 (lower is better) Translates to: RQLHHAKSIHEPTFWRKSDLSII*ISAIWD Trigger: ATCCCAGATGGCACTGATCCAAATGATGCTAAGGTC...ACTTTTCCTCCAAAATGTAGGTTCGTGAATAGACTTAGCATGATGAAGCTGTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030568.14 |
||
| CDS-3UTR CCA 90 bp | ACTTACACTCCTATCCATAGTTTTACTTCCTGCAGGTTTTTCCACAGCATTATACACGAGTGTTGTCCTTaGATTGTCAGTTTCCAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: TYTPIHSFTSCRFFHSIIHECCP*IVSFQQ Trigger: CTGCTGGAAACTGACAATCCAAGGACAACACTCGTG...TATAATGCTGTGGAAAAACCTGCAGGAAGTAAAACTATGGATAGGAGTGTAAGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030568.14 |
||
| CDS-3UTR CCA 90 bp | ACTTACACTCCTATCCATAGTTTTACTTCCTGCAGGTTTTTCCACAGCATTATAAGTGACAACGTCATCTaGGAAGTCCTTGGTGGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: TYTPIHSFTSCRFFHSIISDNVI*EVLGGS Trigger: AGAACCACCAAGGACTTCCCAGATGACGTTGTCACT...TATAATGCTGTGGAAAAACCTGCAGGAAGTAAAACTATGGATAGGAGTGTAAGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030568.14 |
||
| CDS-3UTR CCA 90 bp | TTCCCTTTGGATAGCTTCACTCTGCATGGAAAAGTTGAATGCTTTAATAATACTAGGATGTCCTTTGGATaGAAGGGTAGAGCCCTCACA | + |
|
Preference number: 4 (lower is better) Translates to: FPLDSFTLHGKVECFNNTRMSFG*KGRALT Trigger: TGTGAGGGCTCTACCCTTCCATCCAAAGGACATCCT...AGTATTATTAAAGCATTCAACTTTTCCATGCAGAGTGAAGCTATCCAAAGGGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030568.14 |
||
| CDS-3UTR TCA 90 bp | TTCCCTTTGGATAGCTTCACTCTGCATGGAAAAGTTGAATGCTTTAATAATACTTGGCTATGGTCTGTTTaGAGCTGTTCTCAGTGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: FPLDSFTLHGKVECFNNTWLWSV*SCSQWQ Trigger: TTGCCACTGAGAACAGCTTCAAACAGACCATAGCCA...AGTATTATTAAAGCATTCAACTTTTCCATGCAGAGTGAAGCTATCCAAAGGGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030568.14 |
||
| CDS-3UTR GCA 90 bp | CTACCAACTTACACTCCTATCCATAGTTTTACTTCCTGCAGGTTTTTCCACAGCCTGAACAATTTCAGCTaGATTTCTGTATGCTTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: LPTYTPIHSFTSCRFFHSLNNFS*ISVCFQ Trigger: CTGAAAGCATACAGAAATGCAGCTGAAATTGTTCAG...GCTGTGGAAAAACCTGCAGGAAGTAAAACTATGGATAGGAGTGTAAGTTGGTAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030568.14 |
||
| CDS-3UTR CCA 90 bp | TTCCCTTTGGATAGCTTCACTCTGCATGGAAAAGTTGAATGCTTTAATAATACTTCCTGGGCGAGGATATaGGATTCTACCTTGATAGGA | + |
|
Preference number: 4 (lower is better) Translates to: FPLDSFTLHGKVECFNNTSWARI*DSTLIG Trigger: TCCTATCAAGGTAGAATCCCATATCCTCGCCCAGGA...AGTATTATTAAAGCATTCAACTTTTCCATGCAGAGTGAAGCTATCCAAAGGGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030568.14 |
||
| CDS-3UTR CCA 90 bp | ATAGATCTCCCATCAAAGGCCTTGGATGGTACAGGCCATTTCTTTTGTTTTTCTTTGTACATGAGAGGGTaGTTCCGAATAAAAGTGACA | + |
|
Preference number: 4 (lower is better) Translates to: IDLPSKALDGTGHFFCFSLYMRG*FRIKVT Trigger: TGTCACTTTTATTCGGAACCACCCTCTCATGTACAA...AGAAAAACAAAAGAAATGGCCTGTACCATCCAAGGCCTTTGATGGGAGATCTAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000030568.14 |
||
| CDS-3UTR CCA 90 bp | TTCCCTTTGGATAGCTTCACTCTGCATGGAAAAGTTGAATGCTTTAATAATACTGAGGCCTTCTGTGGATaGGGTAGATGGAATTGTACA | + |
|
Preference number: 4 (lower is better) Translates to: FPLDSFTLHGKVECFNNTEAFCG*GRWNCT Trigger: TGTACAATTCCATCTACCCCATCCACAGAAGGCCTC...AGTATTATTAAAGCATTCAACTTTTCCATGCAGAGTGAAGCTATCCAAAGGGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030568.14 |
||
| CDS-3UTR TCA 90 bp | AGACAGCTTCATCATGCTAAGTCTATTCACGAACCTACATTTTGGAGGAAAAGTACATATATCCGGTCTTaGTCTTCATCCATCAGCAAT | + |
|
Preference number: 4 (lower is better) Translates to: RQLHHAKSIHEPTFWRKSTYIRS*SSSISN Trigger: ATTGCTGATGGATGAAGATCAAGACCGGATATATGT...ACTTTTCCTCCAAAATGTAGGTTCGTGAATAGACTTAGCATGATGAAGCTGTCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030568.14 |
||
| CDS-3UTR TCA 90 bp | TTTTTATGCACCACAAGGACCATGACATGTCTAGTGCTAGTCTGTATCATACAATTCAACTTTGATTGTTaGTGCTGGCCAGAAAACACT | + |
|
Preference number: 4 (lower is better) Translates to: FLCTTRTMTCLVLVCIIQFNFDC*CWPENT Trigger: AGTGTTTTCTGGCCAGCATCAACAATCAAAGTTGAA...TTGTATGATACAGACTAGCACTAGACATGTCATGGTCCTTGTGGTGCATAAAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030568.14 |
||
| CDS-3UTR TCA 90 bp | ATAGATCTCCCATCAAAGGCCTTGGATGGTACAGGCCATTTCTTTTGTTTTTCTTTCACTCAGCCATTTTaGATTATGTTGATCAGTTCG | + |
|
Preference number: 4 (lower is better) Translates to: IDLPSKALDGTGHFFCFSFTQPF*IMLISS Trigger: CGAACTGATCAACATAATTCAAAATGGCTGAGTGAA...AGAAAAACAAAAGAAATGGCCTGTACCATCCAAGGCCTTTGATGGGAGATCTAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000030568.14 |
||
| CDS-3UTR TCA 90 bp | ACTTACACTCCTATCCATAGTTTTACTTCCTGCAGGTTTTTCCACAGCATTATAGTTGTTATGGGAACATaGTTCTTGAAGACTTCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: TYTPIHSFTSCRFFHSIIVVMGT*FLKTSS Trigger: GCTGGAAGTCTTCAAGAATCATGTTCCCATAACAAC...TATAATGCTGTGGAAAAACCTGCAGGAAGTAAAACTATGGATAGGAGTGTAAGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030568.14 |
||
| CDS-3UTR GCA 90 bp | AAACCAACCCAGGAGGTACTAAATAGAACAAATAATAGCCAAGTGGCTGGCAGTATTAGGGCATATTCTTaGAATCATGGAATGAATCTG | + |
|
Preference number: 4 (lower is better) Translates to: KPTQEVLNRTNNSQVAGSIRAYS*NHGMNL Trigger: CAGATTCATTCCATGATTGCAAGAATATGCCCTAAT...ACTGCCAGCCACTTGGCTATTATTTGTTCTATTTAGTACCTCCTGGGTTGGTTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030568.14 |
||
| CDS-3UTR TCA 90 bp | AGACAGCTTCATCATGCTAAGTCTATTCACGAACCTACATTTTGGAGGAAAAGTTGTATATCAGATAAATaGTACACACACACTGCCGAT | + |
|
Preference number: 4 (lower is better) Translates to: RQLHHAKSIHEPTFWRKSCISDK*YTHTAD Trigger: ATCGGCAGTGTGTGTGTATCATTTATCTGATATACA...ACTTTTCCTCCAAAATGTAGGTTCGTGAATAGACTTAGCATGATGAAGCTGTCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030568.14 |
||
| CDS-3UTR GCA 90 bp | ACTTACACTCCTATCCATAGTTTTACTTCCTGCAGGTTTTTCCACAGCATTATAATGATACACACACACTaGCGATCCCTTAAAAACAGA | + |
|
Preference number: 4 (lower is better) Translates to: TYTPIHSFTSCRFFHSIIMIHTH*RSLKNR Trigger: TCTGTTTTTAAGGGATCGGCAGTGTGTGTGTATCAT...TATAATGCTGTGGAAAAACCTGCAGGAAGTAAAACTATGGATAGGAGTGTAAGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000030568.14 |
||
| CDS-3UTR GCA 90 bp | TTTTTATGCACCACAAGGACCATGACATGTCTAGTGCTAGTCTGTATCATACAACTCACGTACAACTGTTaGTTTTTGGATGAGATTTTC | + |
|
Preference number: 4 (lower is better) Translates to: FLCTTRTMTCLVLVCIIQLTYNC*FLDEIF Trigger: GAAAATCTCATCCAAAAAGCAACAGTTGTACGTGAG...TTGTATGATACAGACTAGCACTAGACATGTCATGGTCCTTGTGGTGCATAAAAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000030568.14 |
||
| CDS-3UTR TCA 90 bp | TGTAACCTACATGACACTGGATGTCACACACATTTATATGACATTTACTATGTGCTTGCAATCATGGAATaGATCTGTTTTGTGCTCCTA | + |
|
Preference number: 4 (lower is better) Translates to: CNLHDTGCHTHLYDIYYVLAIME*ICFVLL Trigger: TAGGAGCACAAAACAGATTCATTCCATGATTGCAAG...CACATAGTAAATGTCATATAAATGTGTGTGACATCCAGTGTCATGTAGGTTACA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030568.14 |
||
| CDS-3UTR GCA 90 bp | TTTTTATGCACCACAAGGACCATGACATGTCTAGTGCTAGTCTGTATCATACAAAATGAATCTGTTTTGTaGTCCTATTGTTGTCAGTCA | + |
|
Preference number: 4 (lower is better) Translates to: FLCTTRTMTCLVLVCIIQNESVL*SYCCQS Trigger: TGACTGACAACAATAGGAGCACAAAACAGATTCATT...TTGTATGATACAGACTAGCACTAGACATGTCATGGTCCTTGTGGTGCATAAAAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000030568.14 |
||
| CDS-3UTR CCA 90 bp | TGTAACCTACATGACACTGGATGTCACACACATTTATATGACATTTACTATGTGAGTACTCAGAGGTTTTaGTTTCTCGAAGCTCATCAA | + |
|
Preference number: 4 (lower is better) Translates to: CNLHDTGCHTHLYDIYYVSTQRF*FLEAHQ Trigger: TTGATGAGCTTCGAGAAACCAAAACCTCTGAGTACT...CACATAGTAAATGTCATATAAATGTGTGTGACATCCAGTGTCATGTAGGTTACA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030568.14 |
||
| CDS-3UTR TCA 90 bp | TTCCCTTTGGATAGCTTCACTCTGCATGGAAAAGTTGAATGCTTTAATAATACTGTCTATATACATTCCTaGGAAGAGTTCCTCATTGAT | + |
|
Preference number: 4 (lower is better) Translates to: FPLDSFTLHGKVECFNNTVYIHS*EEFLID Trigger: ATCAATGAGGAACTCTTCTCAGGAATGTATATAGAC...AGTATTATTAAAGCATTCAACTTTTCCATGCAGAGTGAAGCTATCCAAAGGGAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030568.14 |
||
| CDS-3UTR GCA 90 bp | TTCCCTTTGGATAGCTTCACTCTGCATGGAAAAGTTGAATGCTTTAATAATACTCACACTCAAGGAAAGTaGTGTTATTTCTTACTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: FPLDSFTLHGKVECFNNTHTQGK*CYFLLH Trigger: ATGGAGTAAGAAATAACAGCACTTTCCTTGAGTGTG...AGTATTATTAAAGCATTCAACTTTTCCATGCAGAGTGAAGCTATCCAAAGGGAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030568.14 |
||
| CDS CCA 90 bp | AGCTGCATTTCCGAGTGGCTGAATGCCCCCAGGATGTCCTTTGGATaGAAGGGTAGAGCCCTCACAGAGCCAGCCCATGTCCACGGGGAC | + |
|
Preference number: 5 (lower is better) Translates to: SCISEWLNAPRMSFG*KGRALTEPAHVHGD Trigger: GTCCCCGTGGACATGGGCTGGCTCTGTGAGGGCTCTACCCTTCCATCCAAAGGACATCCTGGGGGCATTCAGCCACTCGGAAATGCAGCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030568.14 |
||
| CDS CCA 90 bp | ACGACCTTCTGCACGGTGCCCCGATCTGTGCCCAGAAACAGAACGTaGTATCTCCCATCAGCAGCGTTGACACGGTCCACAGCAATCTTT | + |
|
Preference number: 5 (lower is better) Translates to: TTFCTVPRSVPRNRT*YLPSAALTRSTAIF Trigger: AAAGATTGCTGTGGACCGTGTCAACGCTGCTGATGGGAGATACCACGTTCTGTTTCTGGGCACAGATCGGGGCACCGTGCAGAAGGTCGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030568.14 |
||
| CDS CCA 90 bp | ATTGGGTGTAAAGGCCCCTCCTGGGCAAGTTCCTGGGCGAGGATATaGGATTCTACCTTGATAGGAGATCAGCTGGTGATTGGGCCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: IGCKGPSWASSWARI*DSTLIGDQLVIGPF Trigger: GAAGGGCCCAATCACCAGCTGATCTCCTATCAAGGTAGAATCCCATATCCTCGCCCAGGAACTTGCCCAGGAGGGGCCTTTACACCCAAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030568.14 |
||
| CDS TCA 90 bp | TTTGCCAGATTCACACTTAGAGTCGATCATGAATACCTGGTCCTCTaGCCTCCTTCCCCGGTTCAGGTAGGTGCACACTGGGCTGAACGC | + |
|
Preference number: 5 (lower is better) Translates to: FARFTLRVDHEYLVL*PPSPVQVGAHWAER Trigger: GCGTTCAGCCCAGTGTGCACCTACCTGAACCGGGGAAGGAGGTCAGAGGACCAGGTATTCATGATCGACTCTAAGTGTGAATCTGGCAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030568.14 |
||
| CDS TCA 90 bp | TCGTCCTTTGCCAGATTCACACTTAGAGTCGATCATGAATACCTCTaGCCTCCTTCCCCGGTTCAGGTAGGTGCACACTGGGCTGAACGC | + |
|
Preference number: 5 (lower is better) Translates to: SSFARFTLRVDHEYL*PPSPVQVGAHWAER Trigger: GCGTTCAGCCCAGTGTGCACCTACCTGAACCGGGGAAGGAGGTCAGAGGTATTCATGATCGACTCTAAGTGTGAATCTGGCAAAGGACGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169603.2 |
||
| CDS TCA 90 bp | GATCTGTGCCCAGAAACAGAACGTGGTATCTCCCATCAGCAGCGTTaGCACGGTCCACAGCAATCTTTGTGTACTTGTAGTCAGTGCCTA | + |
|
Preference number: 5 (lower is better) Translates to: DLCPETERGISHQQR*HGPQQSLCTCSQCL Trigger: TAGGCACTGACTACAAGTACACAAAGATTGCTGTGGACCGTGTCAACGCTGCTGATGGGAGATACCACGTTCTGTTTCTGGGCACAGATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030568.14 |
||
| CDS CCA 90 bp | TGCATTTCTGTATGCTTTCAGATTGAACCCTCGGCATTGTGTCAGTaGGTTTCCATGTCTCACATCTTGTCTTCGGCTCCTCCGCTTCCC | + |
|
Preference number: 5 (lower is better) Translates to: CISVCFQIEPSALCQ*VSMSHILSSAPPLP Trigger: GGGAAGCGGAGGAGCCGAAGACAAGATGTGAGACATGGAAACCCACTGACACAATGCCGAGGGTTCAATCTGAAAGCATACAGAAATGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030568.14 |
||
| CDS-3UTR CAA 90 bp | ATAGATCTCCCATCAAAGGCCTTGGATGGTACAGGCCATTTCTTTTGTTTTTCTGTCCACGGGGACCACTaGTCTGTCACAACGGCCACC | + |
|
Preference number: 5 (lower is better) Translates to: IDLPSKALDGTGHFFCFSVHGDH*SVTTAT Trigger: GGTGGCCGTTGTGACAGACAAGTGGTCCCCGTGGAC...AGAAAAACAAAAGAAATGGCCTGTACCATCCAAGGCCTTTGATGGGAGATCTAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000030568.14 |
||
| CDS GCA 90 bp | CTCCTTCCTCCTGTCTTTGTCTTTCTGCAGCAACCACTTGATAGATaGCTGTGGAGACTTGGGAGCACACTCAAGGAAAGTGCTGTTATT | + |
|
Preference number: 5 (lower is better) Translates to: LLPPVFVFLQQPLDR*LWRLGSTLKESAVI Trigger: AATAACAGCACTTTCCTTGAGTGTGCTCCCAAGTCTCCACAGGCATCTATCAAGTGGTTGCTGCAGAAAGACAAAGACAGGAGGAAGGAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030568.14 |
||
| CDS CCA 90 bp | CCTCCTGTCTTTGTCTTTCTGCAGCAACCACTTGATAGATGCCTGTaGAGACTTGGGAGCACACTCAAGGAAAGTGCTGTTATTTCTTAC | + |
|
Preference number: 5 (lower is better) Translates to: PPVFVFLQQPLDRCL*RLGSTLKESAVISY Trigger: GTAAGAAATAACAGCACTTTCCTTGAGTGTGCTCCCAAGTCTCCACAGGCATCTATCAAGTGGTTGCTGCAGAAAGACAAAGACAGGAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030568.14 |
||
| CDS-3UTR CAA 90 bp | AGACAGCTTCATCATGCTAAGTCTATTCACGAACCTACATTTTGGAGGAAAAGTCTCCCATCAGCAGCGTaGACACGGTCCACAGCAATC | + |
|
Preference number: 5 (lower is better) Translates to: RQLHHAKSIHEPTFWRKSLPSAA*TRSTAI Trigger: GATTGCTGTGGACCGTGTCAACGCTGCTGATGGGAG...ACTTTTCCTCCAAAATGTAGGTTCGTGAATAGACTTAGCATGATGAAGCTGTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030568.14 |
||
| CDS-3UTR CAA 90 bp | ATAGATCTCCCATCAAAGGCCTTGGATGGTACAGGCCATTTCTTTTGTTTTTCTCCACTGGCAGAGCTATaGGTAGGAAGGACTACGACC | + |
|
Preference number: 5 (lower is better) Translates to: IDLPSKALDGTGHFFCFSPLAEL*VGRTTT Trigger: GGTCGTAGTCCTTCCTACCAATAGCTCTGCCAGTGG...AGAAAAACAAAAGAAATGGCCTGTACCATCCAAGGCCTTTGATGGGAGATCTAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030568.14 |
||
| CDS-3UTR CAA 90 bp | AGGATATGGGATTCTACCTTGATAGGAGATCAGCTGGTGATTGGGCCCTTCCTTATGTTAAATAAACTCTaGCTTGGGGCTGGGAAGATC | + |
|
Preference number: 5 (lower is better) Translates to: RIWDSTLIGDQLVIGPFLMLNKL*LGAGKI Trigger: GATCTTCCCAGCCCCAAGCAAGAGTTTATTTAACAT...AAGGAAGGGCCCAATCACCAGCTGATCTCCTATCAAGGTAGAATCCCATATCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170181.8 |
||
| CDS-3UTR CAA 90 bp | ATAGATCTCCCATCAAAGGCCTTGGATGGTACAGGCCATTTCTTTTGTTTTTCTTGGGAAACCCCCTCATaGGAGCTCACGTACAACTGT | + |
|
Preference number: 5 (lower is better) Translates to: IDLPSKALDGTGHFFCFSWETPS*ELTYNC Trigger: ACAGTTGTACGTGAGCTCCAATGAGGGGGTTTCCCA...AGAAAAACAAAAGAAATGGCCTGTACCATCCAAGGCCTTTGATGGGAGATCTAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000030568.14 |
||
| CDS-3UTR CAA 90 bp | AAACCAACCCAGGAGGTACTAAATAGAACAAATAATAGCCAAGTGGCTGGCAGTTTCTGCAGCAACCACTaGATAGATGCCTGTGGAGAC | + |
|
Preference number: 5 (lower is better) Translates to: KPTQEVLNRTNNSQVAGSFCSNH*IDACGD Trigger: GTCTCCACAGGCATCTATCAAGTGGTTGCTGCAGAA...ACTGCCAGCCACTTGGCTATTATTTGTTCTATTTAGTACCTCCTGGGTTGGTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030568.14 |
||
| CDS-3UTR CAA 90 bp | CTACCAACTTACACTCCTATCCATAGTTTTACTTCCTGCAGGTTTTTCCACAGCCTGCTTTTCCTGCTGTaGATGAGAGCCTTCAGCTTG | + |
|
Preference number: 5 (lower is better) Translates to: LPTYTPIHSFTSCRFFHSLLFLL*MRAFSL Trigger: CAAGCTGAAGGCTCTCATCAACAGCAGGAAAAGCAG...GCTGTGGAAAAACCTGCAGGAAGTAAAACTATGGATAGGAGTGTAAGTTGGTAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000030568.14 |
||
| CDS-3UTR CAA 90 bp | ACTTACACTCCTATCCATAGTTTTACTTCCTGCAGGTTTTTCCACAGCATTATAGCGATGCAGAGAGACTaGGGAAACCCCCTCATTGGA | + |
|
Preference number: 5 (lower is better) Translates to: TYTPIHSFTSCRFFHSIIAMQRD*GNPLIG Trigger: TCCAATGAGGGGGTTTCCCAAGTCTCTCTGCATCGC...TATAATGCTGTGGAAAAACCTGCAGGAAGTAAAACTATGGATAGGAGTGTAAGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000030568.14 |
||
| CDS-3UTR CAA 90 bp | AGACAGCTTCATCATGCTAAGTCTATTCACGAACCTACATTTTGGAGGAAAAGTGATGCCTGTGGAGACTaGGGAGCACACTCAAGGAAA | + |
|
Preference number: 5 (lower is better) Translates to: RQLHHAKSIHEPTFWRKSDACGD*GAHSRK Trigger: TTTCCTTGAGTGTGCTCCCAAGTCTCCACAGGCATC...ACTTTTCCTCCAAAATGTAGGTTCGTGAATAGACTTAGCATGATGAAGCTGTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030568.14 |
||
| CDS-3UTR CAA 90 bp | ATAGATCTCCCATCAAAGGCCTTGGATGGTACAGGCCATTTCTTTTGTTTTTCTTCCTTCCTCCTGTCTTaGTCTTTCTGCAGCAACCAC | + |
|
Preference number: 5 (lower is better) Translates to: IDLPSKALDGTGHFFCFSSFLLS*SFCSNH Trigger: GTGGTTGCTGCAGAAAGACAAAGACAGGAGGAAGGA...AGAAAAACAAAAGAAATGGCCTGTACCATCCAAGGCCTTTGATGGGAGATCTAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030568.14 |
||
| CDS-3UTR CAA 90 bp | AAACCAACCCAGGAGGTACTAAATAGAACAAATAATAGCCAAGTGGCTGGCAGTTTGGCTATGGTCTGTTaGAAGCTGTTCTCAGTGGCA | + |
|
Preference number: 5 (lower is better) Translates to: KPTQEVLNRTNNSQVAGSLAMVC*KLFSVA Trigger: TGCCACTGAGAACAGCTTCAAACAGACCATAGCCAA...ACTGCCAGCCACTTGGCTATTATTTGTTCTATTTAGTACCTCCTGGGTTGGTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030568.14 |
||
| CDS-3UTR CAA 90 bp | ACTTACACTCCTATCCATAGTTTTACTTCCTGCAGGTTTTTCCACAGCATTATATCCATGTCTCACATCTaGTCTTCGGCTCCTCCGCTT | + |
|
Preference number: 5 (lower is better) Translates to: TYTPIHSFTSCRFFHSIISMSHI*SSAPPL Trigger: AAGCGGAGGAGCCGAAGACAAGATGTGAGACATGGA...TATAATGCTGTGGAAAAACCTGCAGGAAGTAAAACTATGGATAGGAGTGTAAGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030568.14 |
||
| CDS-3UTR CAA 90 bp | AAACCAACCCAGGAGGTACTAAATAGAACAAATAATAGCCAAGTGGCTGGCAGTCACATATATCCGGTCTaGATCTTCATCCATCAGCAA | + |
|
Preference number: 5 (lower is better) Translates to: KPTQEVLNRTNNSQVAGSHIYPV*IFIHQQ Trigger: TTGCTGATGGATGAAGATCAAGACCGGATATATGTG...ACTGCCAGCCACTTGGCTATTATTTGTTCTATTTAGTACCTCCTGGGTTGGTTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030568.14 |
||
| CDS-3UTR CAA 90 bp | ATAGATCTCCCATCAAAGGCCTTGGATGGTACAGGCCATTTCTTTTGTTTTTCTAAAGAGCATCGTCCTTaGCCAGATTCACACTTAGAG | + |
|
Preference number: 5 (lower is better) Translates to: IDLPSKALDGTGHFFCFSKEHRP*PDSHLE Trigger: CTCTAAGTGTGAATCTGGCAAAGGACGATGCTCTTT...AGAAAAACAAAAGAAATGGCCTGTACCATCCAAGGCCTTTGATGGGAGATCTAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030568.14 |
||
| CDS-3UTR CAA 90 bp | TTTTTATGCACCACAAGGACCATGACATGTCTAGTGCTAGTCTGTATCATACAAGTTGACAAGACTACGTaGTCCACCAGTGTCATTAGG | + |
|
Preference number: 5 (lower is better) Translates to: FLCTTRTMTCLVLVCIIQVDKTT*STSVIR Trigger: CCTAATGACACTGGTGGACAACGTAGTCTTGTCAAC...TTGTATGATACAGACTAGCACTAGACATGTCATGGTCCTTGTGGTGCATAAAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030568.14 |
||
| CDS-3UTR CAA 90 bp | ATAGATCTCCCATCAAAGGCCTTGGATGGTACAGGCCATTTCTTTTGTTTTTCTAGTGTTGTCCTTGGATaGTCAGTTTCCAGCAGAAAG | + |
|
Preference number: 5 (lower is better) Translates to: IDLPSKALDGTGHFFCFSSVVLG*SVSSRK Trigger: CTTTCTGCTGGAAACTGACAATCCAAGGACAACACT...AGAAAAACAAAAGAAATGGCCTGTACCATCCAAGGCCTTTGATGGGAGATCTAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030568.14 |
||
| CDS-3UTR CAA 90 bp | TTTTTATGCACCACAAGGACCATGACATGTCTAGTGCTAGTCTGTATCATACAAACACGAGTGTTGTCCTaGGATTGTCAGTTTCCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: FLCTTRTMTCLVLVCIIQTRVLS*DCQFPA Trigger: TGCTGGAAACTGACAATCCAAGGACAACACTCGTGT...TTGTATGATACAGACTAGCACTAGACATGTCATGGTCCTTGTGGTGCATAAAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030568.14 |
||
| CDS-3UTR CAA 90 bp | ATAGATCTCCCATCAAAGGCCTTGGATGGTACAGGCCATTTCTTTTGTTTTTCTATGTTAAATAAACTCTaGCTTGGGGCTGGGAAGATC | + |
|
Preference number: 5 (lower is better) Translates to: IDLPSKALDGTGHFFCFSMLNKL*LGAGKI Trigger: GATCTTCCCAGCCCCAAGCAAGAGTTTATTTAACAT...AGAAAAACAAAAGAAATGGCCTGTACCATCCAAGGCCTTTGATGGGAGATCTAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000030568.14 |
||
| CDS-3UTR CAA 90 bp | CTACCAACTTACACTCCTATCCATAGTTTTACTTCCTGCAGGTTTTTCCACAGCTCTTTGCCAGCCATTTaGCACTCTTCAACTTTGATT | + |
|
Preference number: 5 (lower is better) Translates to: LPTYTPIHSFTSCRFFHSSLPAI*HSSTLI Trigger: AATCAAAGTTGAAGAGTGCAAAATGGCTGGCAAAGA...GCTGTGGAAAAACCTGCAGGAAGTAAAACTATGGATAGGAGTGTAAGTTGGTAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030568.14 |
||
| CDS-3UTR CAA 90 bp | CTACCAACTTACACTCCTATCCATAGTTTTACTTCCTGCAGGTTTTTCCACAGCTGTTTTGTGCTCCTATaGTTGTCAGTCAGTCTTTCT | + |
|
Preference number: 5 (lower is better) Translates to: LPTYTPIHSFTSCRFFHSCFVLL*LSVSLS Trigger: AGAAAGACTGACTGACAACAATAGGAGCACAAAACA...GCTGTGGAAAAACCTGCAGGAAGTAAAACTATGGATAGGAGTGTAAGTTGGTAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000030568.14 |
||
| CDS-3UTR CAA 90 bp | AGACAGCTTCATCATGCTAAGTCTATTCACGAACCTACATTTTGGAGGAAAAGTAATGTGGTCCACTTGTaGACAAGACTACGTTGTCCA | + |
|
Preference number: 5 (lower is better) Translates to: RQLHHAKSIHEPTFWRKSNVVHL*TRLRCP Trigger: TGGACAACGTAGTCTTGTCAACAAGTGGACCACATT...ACTTTTCCTCCAAAATGTAGGTTCGTGAATAGACTTAGCATGATGAAGCTGTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030568.14 |
||
| CDS-3UTR CAA 90 bp | ACTTACACTCCTATCCATAGTTTTACTTCCTGCAGGTTTTTCCACAGCATTATAGGTCCACAGCAATCTTaGTGTACTTGTAGTCAGTGC | + |
|
Preference number: 5 (lower is better) Translates to: TYTPIHSFTSCRFFHSIIGPQQS*CTCSQC Trigger: GCACTGACTACAAGTACACAAAGATTGCTGTGGACC...TATAATGCTGTGGAAAAACCTGCAGGAAGTAAAACTATGGATAGGAGTGTAAGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030568.14 |
||
| CDS TCA 90 bp | TGTAGGATCTTTGCCAGCCATTTTGCACTCTTCAACTTTGATTGTTaGTGCTGGCCAGAAAACACTCAAAGGTTCTTGACTGATATTGTT | + |
|
Preference number: 5 (lower is better) Translates to: CRIFASHFALFNFDC*CWPENTQRFLTDIV Trigger: AACAATATCAGTCAAGAACCTTTGAGTGTTTTCTGGCCAGCATCAACAATCAAAGTTGAAGAGTGCAAAATGGCTGGCAAAGATCCTACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030568.14 ENSMUST00000169603.2 |
||
| CDS GCA 90 bp | AAGGAAAGTGCTGTTATTTCTTACTCCATACTGAACAATTTCAGCTaGATTTCTGTATGCTTTCAGATTGAACCCTCGGCATTGTGTCAG | + |
|
Preference number: 5 (lower is better) Translates to: KESAVISYSILNNFS*ISVCFQIEPSALCQ Trigger: CTGACACAATGCCGAGGGTTCAATCTGAAAGCATACAGAAATGCAGCTGAAATTGTTCAGTATGGAGTAAGAAATAACAGCACTTTCCTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030568.14 |
||
| CDS-3UTR CAA 90 bp | TTTTTATGCACCACAAGGACCATGACATGTCTAGTGCTAGTCTGTATCATACAAAAGTACTCAGAGGTTTaGGTTTCTCGAAGCTCATCA | + |
|
Preference number: 5 (lower is better) Translates to: FLCTTRTMTCLVLVCIIQKYSEV*VSRSSS Trigger: TGATGAGCTTCGAGAAACCAAAACCTCTGAGTACTT...TTGTATGATACAGACTAGCACTAGACATGTCATGGTCCTTGTGGTGCATAAAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030568.14 |
||
| CDS-3UTR CAA 90 bp | TGTAACCTACATGACACTGGATGTCACACACATTTATATGACATTTACTATGTGCCATGTGTAGGATCTTaGCCAGCCATTTTGCACTCT | + |
|
Preference number: 5 (lower is better) Translates to: CNLHDTGCHTHLYDIYYVPCVGS*PAILHS Trigger: AGAGTGCAAAATGGCTGGCAAAGATCCTACACATGG...CACATAGTAAATGTCATATAAATGTGTGTGACATCCAGTGTCATGTAGGTTACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030568.14 |
||
| CDS-3UTR CAA 90 bp | TGTAACCTACATGACACTGGATGTCACACACATTTATATGACATTTACTATGTGGTGTTCACATTCGGGTaGAAAGAGCATCGTCCTTTG | + |
|
Preference number: 5 (lower is better) Translates to: CNLHDTGCHTHLYDIYYVVFTFG*KEHRPL Trigger: CAAAGGACGATGCTCTTTCAACCCGAATGTGAACAC...CACATAGTAAATGTCATATAAATGTGTGTGACATCCAGTGTCATGTAGGTTACA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030568.14 |
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| CDS-3UTR CAA 90 bp | ACTTACACTCCTATCCATAGTTTTACTTCCTGCAGGTTTTTCCACAGCATTATACTGAGCATACAAGTCTaGCCTTTAAGAATGTGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: TYTPIHSFTSCRFFHSIILSIQV*PLRMWS Trigger: GGACCACATTCTTAAAGGCAAGACTTGTATGCTCAG...TATAATGCTGTGGAAAAACCTGCAGGAAGTAAAACTATGGATAGGAGTGTAAGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030568.14 |
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| CDS-3UTR CAA 90 bp | ACTTACACTCCTATCCATAGTTTTACTTCCTGCAGGTTTTTCCACAGCATTATATGGGCAAAGGGCCCATaGAATACAGTCTGTATATCA | + |
|
Preference number: 5 (lower is better) Translates to: TYTPIHSFTSCRFFHSIIWAKGP*NTVCIS Trigger: TGATATACAGACTGTATTCAATGGGCCCTTTGCCCA...TATAATGCTGTGGAAAAACCTGCAGGAAGTAAAACTATGGATAGGAGTGTAAGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030568.14 |
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| CDS-3UTR CAA 90 bp | TTCCCTTTGGATAGCTTCACTCTGCATGGAAAAGTTGAATGCTTTAATAATACTTCATCTGGGAAGTCCTaGGTGGTTCTCATATTGGGT | + |
|
Preference number: 5 (lower is better) Translates to: FPLDSFTLHGKVECFNNTSSGKS*VVLILG Trigger: ACCCAATATGAGAACCACCAAGGACTTCCCAGATGA...AGTATTATTAAAGCATTCAACTTTTCCATGCAGAGTGAAGCTATCCAAAGGGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030568.14 |
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| CDS-3UTR CAA 90 bp | AAACCAACCCAGGAGGTACTAAATAGAACAAATAATAGCCAAGTGGCTGGCAGTTCTAAAACTTTGAAGTaGATCTTGGCTATGGTCTGT | + |
|
Preference number: 5 (lower is better) Translates to: KPTQEVLNRTNNSQVAGSSKTLK*ILAMVC Trigger: ACAGACCATAGCCAAGATCAACTTCAAAGTTTTAGA...ACTGCCAGCCACTTGGCTATTATTTGTTCTATTTAGTACCTCCTGGGTTGGTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030568.14 |
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| CDS TCA 90 bp | TCAACTTTGATTGTTGATGCTGGCCAGAAAACACTCAAAGGTTCTTaGCTGATATTGTTGATATTCAAAGACAGGATGTGGTCTTTGCTC | + |
|
Preference number: 5 (lower is better) Translates to: STLIVDAGQKTLKGS*LILLIFKDRMWSLL Trigger: GAGCAAAGACCACATCCTGTCTTTGAATATCAACAATATCAGTCAAGAACCTTTGAGTGTTTTCTGGCCAGCATCAACAATCAAAGTTGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030568.14 ENSMUST00000169603.2 |
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| CDS-3UTR CAA 90 bp | TTCCCTTTGGATAGCTTCACTCTGCATGGAAAAGTTGAATGCTTTAATAATACTTTGCACTCTTCAACTTaGATTGTTGATGCTGGCCAG | + |
|
Preference number: 5 (lower is better) Translates to: FPLDSFTLHGKVECFNNTLHSST*IVDAGQ Trigger: CTGGCCAGCATCAACAATCAAAGTTGAAGAGTGCAA...AGTATTATTAAAGCATTCAACTTTTCCATGCAGAGTGAAGCTATCCAAAGGGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030568.14 |
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| CDS-3UTR CAA 90 bp | AGACAGCTTCATCATGCTAAGTCTATTCACGAACCTACATTTTGGAGGAAAAGTACTTTGAAGTTGATCTaGGCTATGGTCTGTTTGAAG | + |
|
Preference number: 5 (lower is better) Translates to: RQLHHAKSIHEPTFWRKSTLKLI*AMVCLK Trigger: CTTCAAACAGACCATAGCCAAGATCAACTTCAAAGT...ACTTTTCCTCCAAAATGTAGGTTCGTGAATAGACTTAGCATGATGAAGCTGTCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030568.14 |
||
| CDS-3UTR CAA 90 bp | TGTAACCTACATGACACTGGATGTCACACACATTTATATGACATTTACTATGTGGAGAAGAGTTCCTCATaGATCATAACAGACACAGTG | + |
|
Preference number: 5 (lower is better) Translates to: CNLHDTGCHTHLYDIYYVEKSSS*IITDTV Trigger: CACTGTGTCTGTTATGATCAATGAGGAACTCTTCTC...CACATAGTAAATGTCATATAAATGTGTGTGACATCCAGTGTCATGTAGGTTACA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030568.14 |
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| CDS GCA 72 bp | ATGGATCCCTCGCCAAGCAGCAGTCCGCACAGGCTGTaGCGTAGATATGGCAGCGATGCAGAGAGACTTGGG | + |
|
Preference number: 6 (lower is better) Translates to: MDPSPSSSPHRL*RRYGSDAERLG Trigger: CCCAAGTCTCTCTGCATCGCTGCCATATCTACGGCACAGCCTGTGCGGACTGCTGCTTGGCGAGGGATCCAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030568.14 |
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| CDS CCA 72 bp | TCCGAGTGGCTGAATGCCCCCAGGATGTCCTTTGGATaGAAGGGTAGAGCCCTCACAGAGCCAGCCCATGTC | + |
|
Preference number: 6 (lower is better) Translates to: SEWLNAPRMSFG*KGRALTEPAHV Trigger: GACATGGGCTGGCTCTGTGAGGGCTCTACCCTTCCATCCAAAGGACATCCTGGGGGCATTCAGCCACTCGGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030568.14 |
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| CDS CCA 72 bp | TGCACGGTGCCCCGATCTGTGCCCAGAAACAGAACGTaGTATCTCCCATCAGCAGCGTTGACACGGTCCACA | + |
|
Preference number: 6 (lower is better) Translates to: CTVPRSVPRNRT*YLPSAALTRST Trigger: TGTGGACCGTGTCAACGCTGCTGATGGGAGATACCACGTTCTGTTTCTGGGCACAGATCGGGGCACCGTGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030568.14 |
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| CDS CAA 72 bp | AGCTCCTCCAGGATGAGTTCCCCACTGGCAGAGCTATaGGTAGGAAGGACTACGACCTTCTGCACGGTGCCC | + |
|
Preference number: 6 (lower is better) Translates to: SSSRMSSPLAEL*VGRTTTFCTVP Trigger: GGGCACCGTGCAGAAGGTCGTAGTCCTTCCTACCAATAGCTCTGCCAGTGGGGAACTCATCCTGGAGGAGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030568.14 |
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| CDS TCA 72 bp | CCCAGCTGCTGCTGCTGCCGGGTGTCTTTGCAGTACTaGTTGATGAGCTGCATTTCCGAGTGGCTGAATGCC | + |
|
Preference number: 6 (lower is better) Translates to: PSCCCCRVSLQY*LMSCISEWLNA Trigger: GGCATTCAGCCACTCGGAAATGCAGCTCATCAATCAGTACTGCAAAGACACCCGGCAGCAGCAGCAGCTGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030568.14 |
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| CDS GCA 72 bp | GAAGGACTACGACCTTCTGCACGGTGCCCCGATCTGTaGCCAGAAACAGAACGTGGTATCTCCCATCAGCAG | + |
|
Preference number: 6 (lower is better) Translates to: EGLRPSARCPDL*PETERGISHQQ Trigger: CTGCTGATGGGAGATACCACGTTCTGTTTCTGGGCACAGATCGGGGCACCGTGCAGAAGGTCGTAGTCCTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030568.14 |
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| CDS CAA 72 bp | ACAACGTCATCTGGGAAGTCCTTGGTGGTTCTCATATaGGGTGTAAAGGCCCCTCCTGGGCAAGTTCCTGGG | + |
|
Preference number: 6 (lower is better) Translates to: TTSSGKSLVVLI*GVKAPPGQVPG Trigger: CCCAGGAACTTGCCCAGGAGGGGCCTTTACACCCAATATGAGAACCACCAAGGACTTCCCAGATGACGTTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030568.14 |
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| CDS CAA 90 bp | GTCCGCACAGGCTGTGCCGTAGATATGGCAGCGATGCAGAGAGACTaGGGAAACCCCCTCATTGGAGCTCACGTACAACTGTTGCTTTTT | + |
|
Preference number: 6 (lower is better) Translates to: VRTGCAVDMAAMQRD*GNPLIGAHVQLLLF Trigger: AAAAAGCAACAGTTGTACGTGAGCTCCAATGAGGGGGTTTCCCAAGTCTCTCTGCATCGCTGCCATATCTACGGCACAGCCTGTGCGGAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030568.14 |
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| CDS TCA 72 bp | GCCAGATTCACACTTAGAGTCGATCATGAATACCTCTaGCCTCCTTCCCCGGTTCAGGTAGGTGCACACTGG | + |
|
Preference number: 6 (lower is better) Translates to: ARFTLRVDHEYL*PPSPVQVGAHW Trigger: CCAGTGTGCACCTACCTGAACCGGGGAAGGAGGTCAGAGGTATTCATGATCGACTCTAAGTGTGAATCTGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169603.2 |
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| CDS CCA 72 bp | AAAGGCCCCTCCTGGGCAAGTTCCTGGGCGAGGATATaGGATTCTACCTTGATAGGAGATCAGCTGGTGATT | + |
|
Preference number: 6 (lower is better) Translates to: KGPSWASSWARI*DSTLIGDQLVI Trigger: AATCACCAGCTGATCTCCTATCAAGGTAGAATCCCATATCCTCGCCCAGGAACTTGCCCAGGAGGGGCCTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030568.14 |
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| CDS CAA 72 bp | TGGGCAAGTTCCTGGGCGAGGATATGGGATTCTACCTaGATAGGAGATCAGCTGGTGATTGGGCCCTTCCTT | + |
|
Preference number: 6 (lower is better) Translates to: WASSWARIWDST*IGDQLVIGPFL Trigger: AAGGAAGGGCCCAATCACCAGCTGATCTCCTATCAAGGTAGAATCCCATATCCTCGCCCAGGAACTTGCCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030568.14 |
||
| CDS GCA 72 bp | CACGGTCCACAGCAATCTTTGTGTACTTGTAGTCAGTaGCTATGCGGACTATCAGAGGCCTTCTGTGGATGG | + |
|
Preference number: 6 (lower is better) Translates to: HGPQQSLCTCSQ*LCGLSEAFCGW Trigger: CCATCCACAGAAGGCCTCTGATAGTCCGCATAGGCACTGACTACAAGTACACAAAGATTGCTGTGGACCGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030568.14 |
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| CDS CCA 72 bp | GGCAGCGATGCAGAGAGACTTGGGAAACCCCCTCATTaGAGCTCACGTACAACTGTTGCTTTTTGGATGAGA | + |
|
Preference number: 6 (lower is better) Translates to: GSDAERLGKPPH*SSRTTVAFWMR Trigger: TCTCATCCAAAAAGCAACAGTTGTACGTGAGCTCCAATGAGGGGGTTTCCCAAGTCTCTCTGCATCGCTGCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000030568.14 |
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| CDS CAA 72 bp | TGGCAGCGATGCAGAGAGACTTGGGAAACCCCCTCATaGGAGCTCACGTACAACTGTTGCTTTTTGGATGAG | + |
|
Preference number: 6 (lower is better) Translates to: WQRCRETWETPS*ELTYNCCFLDE Trigger: CTCATCCAAAAAGCAACAGTTGTACGTGAGCTCCAATGAGGGGGTTTCCCAAGTCTCTCTGCATCGCTGCCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000030568.14 |
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| CDS CAA 90 bp | ATAAAAGTGACAACGTCATCTGGGAAGTCCTTGGTGGTTCTCATATaGGGTGTAAAGGCCCCTCCTGGGCAAGTTCCTGGGCGAGGATAT | + |
|
Preference number: 6 (lower is better) Translates to: IKVTTSSGKSLVVLI*GVKAPPGQVPGRGY Trigger: ATATCCTCGCCCAGGAACTTGCCCAGGAGGGGCCTTTACACCCAATATGAGAACCACCAAGGACTTCCCAGATGACGTTGTCACTTTTAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030568.14 |
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| CDS GCA 72 bp | CCACAGCAATCTTTGTGTACTTGTAGTCAGTGCCTATaGGGACTATCAGAGGCCTTCTGTGGATGGGGTAGA | + |
|
Preference number: 6 (lower is better) Translates to: PQQSLCTCSQCL*GLSEAFCGWGR Trigger: TCTACCCCATCCACAGAAGGCCTCTGATAGTCCGCATAGGCACTGACTACAAGTACACAAAGATTGCTGTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030568.14 |
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| CDS CAA 72 bp | TCCTTCCTCCTGTCTTTGTCTTTCTGCAGCAACCACTaGATAGATGCCTGTGGAGACTTGGGAGCACACTCA | + |
|
Preference number: 6 (lower is better) Translates to: SFLLSLSFCSNH*IDACGDLGAHS Trigger: TGAGTGTGCTCCCAAGTCTCCACAGGCATCTATCAAGTGGTTGCTGCAGAAAGACAAAGACAGGAGGAAGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030568.14 |
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| CDS TCA 72 bp | CCAGAAACAGAACGTGGTATCTCCCATCAGCAGCGTTaGCACGGTCCACAGCAATCTTTGTGTACTTGTAGT | + |
|
Preference number: 6 (lower is better) Translates to: PETERGISHQQR*HGPQQSLCTCS Trigger: ACTACAAGTACACAAAGATTGCTGTGGACCGTGTCAACGCTGCTGATGGGAGATACCACGTTCTGTTTCTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030568.14 |
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| CDS GCA 72 bp | CCTGTCTTTGTCTTTCTGCAGCAACCACTTGATAGATaGCTGTGGAGACTTGGGAGCACACTCAAGGAAAGT | + |
|
Preference number: 6 (lower is better) Translates to: PVFVFLQQPLDR*LWRLGSTLKES Trigger: ACTTTCCTTGAGTGTGCTCCCAAGTCTCCACAGGCATCTATCAAGTGGTTGCTGCAGAAAGACAAAGACAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030568.14 |
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| CDS CCA 72 bp | GTATGCTTTCAGATTGAACCCTCGGCATTGTGTCAGTaGGTTTCCATGTCTCACATCTTGTCTTCGGCTCCT | + |
|
Preference number: 6 (lower is better) Translates to: VCFQIEPSALCQ*VSMSHILSSAP Trigger: AGGAGCCGAAGACAAGATGTGAGACATGGAAACCCACTGACACAATGCCGAGGGTTCAATCTGAAAGCATAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030568.14 |
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| CDS CAA 90 bp | AGTTTAACCTCCTTCCTCCTGTCTTTGTCTTTCTGCAGCAACCACTaGATAGATGCCTGTGGAGACTTGGGAGCACACTCAAGGAAAGTG | + |
|
Preference number: 6 (lower is better) Translates to: SLTSFLLSLSFCSNH*IDACGDLGAHSRKV Trigger: CACTTTCCTTGAGTGTGCTCCCAAGTCTCCACAGGCATCTATCAAGTGGTTGCTGCAGAAAGACAAAGACAGGAGGAAGGAGGTTAAACT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030568.14 |
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| CDS CAA 90 bp | GTAGCTATAATGCGCTCGTTCAGTTTAACCTCCTTCCTCCTGTCTTaGTCTTTCTGCAGCAACCACTTGATAGATGCCTGTGGAGACTTG | + |
|
Preference number: 6 (lower is better) Translates to: VAIMRSFSLTSFLLS*SFCSNHLIDACGDL Trigger: CAAGTCTCCACAGGCATCTATCAAGTGGTTGCTGCAGAAAGACAAAGACAGGAGGAAGGAGGTTAAACTGAACGAGCGCATTATAGCTAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030568.14 |
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| CDS CCA 72 bp | TTTGTCTTTCTGCAGCAACCACTTGATAGATGCCTGTaGAGACTTGGGAGCACACTCAAGGAAAGTGCTGTT | + |
|
Preference number: 6 (lower is better) Translates to: FVFLQQPLDRCL*RLGSTLKESAV Trigger: AACAGCACTTTCCTTGAGTGTGCTCCCAAGTCTCCACAGGCATCTATCAAGTGGTTGCTGCAGAAAGACAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030568.14 |
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| CDS CAA 72 bp | TTCCGAATAAAAGTGACAACGTCATCTGGGAAGTCCTaGGTGGTTCTCATATTGGGTGTAAAGGCCCCTCCT | + |
|
Preference number: 6 (lower is better) Translates to: FRIKVTTSSGKS*VVLILGVKAPP Trigger: AGGAGGGGCCTTTACACCCAATATGAGAACCACCAAGGACTTCCCAGATGACGTTGTCACTTTTATTCGGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030568.14 |
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| CDS CAA 72 bp | ATGCGCTCGTTCAGTTTAACCTCCTTCCTCCTGTCTTaGTCTTTCTGCAGCAACCACTTGATAGATGCCTGT | + |
|
Preference number: 6 (lower is better) Translates to: MRSFSLTSFLLS*SFCSNHLIDAC Trigger: ACAGGCATCTATCAAGTGGTTGCTGCAGAAAGACAAAGACAGGAGGAAGGAGGTTAAACTGAACGAGCGCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030568.14 |
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| CDS CAA 90 bp | CGGACGAAATTTCCACAGCCATGTGTAGGATCTTTGCCAGCCATTTaGCACTCTTCAACTTTGATTGTTGATGCTGGCCAGAAAACACTC | + |
|
Preference number: 6 (lower is better) Translates to: RTKFPQPCVGSLPAI*HSSTLIVDAGQKTL Trigger: GAGTGTTTTCTGGCCAGCATCAACAATCAAAGTTGAAGAGTGCAAAATGGCTGGCAAAGATCCTACACATGGCTGTGGAAATTTCGTCCG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030568.14 ENSMUST00000169603.2 |
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| CDS CAA 72 bp | TTTCCACAGCCATGTGTAGGATCTTTGCCAGCCATTTaGCACTCTTCAACTTTGATTGTTGATGCTGGCCAG | + |
|
Preference number: 6 (lower is better) Translates to: FPQPCVGSLPAI*HSSTLIVDAGQ Trigger: CTGGCCAGCATCAACAATCAAAGTTGAAGAGTGCAAAATGGCTGGCAAAGATCCTACACATGGCTGTGGAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030568.14 ENSMUST00000169603.2 |
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| CDS CAA 72 bp | TTCTGCAGCAACCACTTGATAGATGCCTGTGGAGACTaGGGAGCACACTCAAGGAAAGTGCTGTTATTTCTT | + |
|
Preference number: 6 (lower is better) Translates to: FCSNHLIDACGD*GAHSRKVLLFL Trigger: AAGAAATAACAGCACTTTCCTTGAGTGTGCTCCCAAGTCTCCACAGGCATCTATCAAGTGGTTGCTGCAGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030568.14 |
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| CDS CAA 90 bp | ATAACAGACACAGTGTTCACATTCGGGTTGAAAGAGCATCGTCCTTaGCCAGATTCACACTTAGAGTCGATCATGAATACCTGGTCCTCT | + |
|
Preference number: 6 (lower is better) Translates to: ITDTVFTFGLKEHRP*PDSHLESIMNTWSS Trigger: AGAGGACCAGGTATTCATGATCGACTCTAAGTGTGAATCTGGCAAAGGACGATGCTCTTTCAACCCGAATGTGAACACTGTGTCTGTTAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030568.14 |
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| CDS CAA 90 bp | TCTTTGTCTTTCTGCAGCAACCACTTGATAGATGCCTGTGGAGACTaGGGAGCACACTCAAGGAAAGTGCTGTTATTTCTTACTCCATAC | + |
|
Preference number: 6 (lower is better) Translates to: SLSFCSNHLIDACGD*GAHSRKVLLFLTPY Trigger: GTATGGAGTAAGAAATAACAGCACTTTCCTTGAGTGTGCTCCCAAGTCTCCACAGGCATCTATCAAGTGGTTGCTGCAGAAAGACAAAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030568.14 |
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| CDS CAA 90 bp | GTCACAACGGCCACCATTTCTGAATCTAAAACTTTGAAGTTGATCTaGGCTATGGTCTGTTTGAAGCTGTTCTCAGTGGCAATGCAGTGG | + |
|
Preference number: 6 (lower is better) Translates to: VTTATISESKTLKLI*AMVCLKLFSVAMQW Trigger: CCACTGCATTGCCACTGAGAACAGCTTCAAACAGACCATAGCCAAGATCAACTTCAAAGTTTTAGATTCAGAAATGGTGGCCGTTGTGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030568.14 |
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| CDS CAA 90 bp | ATAACAGACACAGTGTTCACATTCGGGTTGAAAGAGCATCGTCCTTaGCCAGATTCACACTTAGAGTCGATCATGAATACCTCTGACCTC | + |
|
Preference number: 6 (lower is better) Translates to: ITDTVFTFGLKEHRP*PDSHLESIMNTSDL Trigger: GAGGTCAGAGGTATTCATGATCGACTCTAAGTGTGAATCTGGCAAAGGACGATGCTCTTTCAACCCGAATGTGAACACTGTGTCTGTTAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169603.2 |
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| CDS CAA 72 bp | ACCCGGACGAAATTTCCACAGCCATGTGTAGGATCTTaGCCAGCCATTTTGCACTCTTCAACTTTGATTGTT | + |
|
Preference number: 6 (lower is better) Translates to: TRTKFPQPCVGS*PAILHSSTLIV Trigger: AACAATCAAAGTTGAAGAGTGCAAAATGGCTGGCAAAGATCCTACACATGGCTGTGGAAATTTCGTCCGGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030568.14 ENSMUST00000169603.2 |
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| CDS CAA 72 bp | ACAGTGTTCACATTCGGGTTGAAAGAGCATCGTCCTTaGCCAGATTCACACTTAGAGTCGATCATGAATACC | + |
|
Preference number: 6 (lower is better) Translates to: TVFTFGLKEHRP*PDSHLESIMNT Trigger: GGTATTCATGATCGACTCTAAGTGTGAATCTGGCAAAGGACGATGCTCTTTCAACCCGAATGTGAACACTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030568.14 ENSMUST00000169603.2 |
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| CDS CAA 72 bp | TGCATTTCTGTATGCTTTCAGATTGAACCCTCGGCATaGTGTCAGTGGGTTTCCATGTCTCACATCTTGTCT | + |
|
Preference number: 6 (lower is better) Translates to: CISVCFQIEPSA*CQWVSMSHILS Trigger: AGACAAGATGTGAGACATGGAAACCCACTGACACAATGCCGAGGGTTCAATCTGAAAGCATACAGAAATGCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030568.14 |
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| CDS CAA 90 bp | AAGAGTTCCTCATTGATCATAACAGACACAGTGTTCACATTCGGGTaGAAAGAGCATCGTCCTTTGCCAGATTCACACTTAGAGTCGATC | + |
|
Preference number: 6 (lower is better) Translates to: KSSSLIITDTVFTFG*KEHRPLPDSHLESI Trigger: GATCGACTCTAAGTGTGAATCTGGCAAAGGACGATGCTCTTTCAACCCGAATGTGAACACTGTGTCTGTTATGATCAATGAGGAACTCTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030568.14 ENSMUST00000169603.2 |
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| CDS CAA 90 bp | GACCACTTGTCTGTCACAACGGCCACCATTTCTGAATCTAAAACTTaGAAGTTGATCTTGGCTATGGTCTGTTTGAAGCTGTTCTCAGTG | + |
|
Preference number: 6 (lower is better) Translates to: DHLSVTTATISESKT*KLILAMVCLKLFSV Trigger: CACTGAGAACAGCTTCAAACAGACCATAGCCAAGATCAACTTCAAAGTTTTAGATTCAGAAATGGTGGCCGTTGTGACAGACAAGTGGTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030568.14 |
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| CDS CAA 72 bp | TGGTTTCTCGAAGCTCATCAAATGTTAAATAAACTCTaGCTTGGGGCTGGGAAGATCCTCGTACACAAATGG | + |
|
Preference number: 6 (lower is better) Translates to: WFLEAHQMLNKL*LGAGKILVHKW Trigger: CCATTTGTGTACGAGGATCTTCCCAGCCCCAAGCAAGAGTTTATTTAACATTTGATGAGCTTCGAGAAACCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030568.14 ENSMUST00000169603.2 |
||
| CDS CAA 72 bp | GTAGGATCTTTGCCAGCCATTTTGCACTCTTCAACTTaGATTGTTGATGCTGGCCAGAAAACACTCAAAGGT | + |
|
Preference number: 6 (lower is better) Translates to: VGSLPAILHSST*IVDAGQKTLKG Trigger: ACCTTTGAGTGTTTTCTGGCCAGCATCAACAATCAAAGTTGAAGAGTGCAAAATGGCTGGCAAAGATCCTAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030568.14 ENSMUST00000169603.2 |
||
| CDS CAA 72 bp | CATGAATACCTGGTCCATCAAATGTTAAATAAACTCTaGCTTGGGGCTGGGAAGATCCTCGTACACAAATGG | + |
|
Preference number: 6 (lower is better) Translates to: HEYLVHQMLNKL*LGAGKILVHKW Trigger: CCATTTGTGTACGAGGATCTTCCCAGCCCCAAGCAAGAGTTTATTTAACATTTGATGGACCAGGTATTCATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170181.8 |
||
| CDS CAA 90 bp | TTGTCTGTCACAACGGCCACCATTTCTGAATCTAAAACTTTGAAGTaGATCTTGGCTATGGTCTGTTTGAAGCTGTTCTCAGTGGCAATG | + |
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Preference number: 6 (lower is better) Translates to: LSVTTATISESKTLK*ILAMVCLKLFSVAM Trigger: CATTGCCACTGAGAACAGCTTCAAACAGACCATAGCCAAGATCAACTTCAAAGTTTTAGATTCAGAAATGGTGGCCGTTGTGACAGACAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030568.14 |
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| CDS TCA 72 bp | TTTGCCAGCCATTTTGCACTCTTCAACTTTGATTGTTaGTGCTGGCCAGAAAACACTCAAAGGTTCTTGACT | + |
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Preference number: 6 (lower is better) Translates to: FASHFALFNFDC*CWPENTQRFLT Trigger: AGTCAAGAACCTTTGAGTGTTTTCTGGCCAGCATCAACAATCAAAGTTGAAGAGTGCAAAATGGCTGGCAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030568.14 ENSMUST00000169603.2 |
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| CDS CAA 72 bp | TCATTGATCATAACAGACACAGTGTTCACATTCGGGTaGAAAGAGCATCGTCCTTTGCCAGATTCACACTTA | + |
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Preference number: 6 (lower is better) Translates to: SLIITDTVFTFG*KEHRPLPDSHL Trigger: TAAGTGTGAATCTGGCAAAGGACGATGCTCTTTCAACCCGAATGTGAACACTGTGTCTGTTATGATCAATGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030568.14 ENSMUST00000169603.2 |
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| CDS CAA 72 bp | GCCACCATTTCTGAATCTAAAACTTTGAAGTTGATCTaGGCTATGGTCTGTTTGAAGCTGTTCTCAGTGGCA | + |
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Preference number: 6 (lower is better) Translates to: ATISESKTLKLI*AMVCLKLFSVA Trigger: TGCCACTGAGAACAGCTTCAAACAGACCATAGCCAAGATCAACTTCAAAGTTTTAGATTCAGAAATGGTGGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030568.14 |
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| CDS CAA 72 bp | TCTGTCACAACGGCCACCATTTCTGAATCTAAAACTTaGAAGTTGATCTTGGCTATGGTCTGTTTGAAGCTG | + |
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Preference number: 6 (lower is better) Translates to: SVTTATISESKT*KLILAMVCLKL Trigger: CAGCTTCAAACAGACCATAGCCAAGATCAACTTCAAAGTTTTAGATTCAGAAATGGTGGCCGTTGTGACAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030568.14 |
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| CDS CAA 72 bp | ACAACGGCCACCATTTCTGAATCTAAAACTTTGAAGTaGATCTTGGCTATGGTCTGTTTGAAGCTGTTCTCA | + |
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Preference number: 6 (lower is better) Translates to: TTATISESKTLK*ILAMVCLKLFS Trigger: TGAGAACAGCTTCAAACAGACCATAGCCAAGATCAACTTCAAAGTTTTAGATTCAGAAATGGTGGCCGTTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030568.14 |
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| CDS TCA 72 bp | ATTGTTGATGCTGGCCAGAAAACACTCAAAGGTTCTTaGCTGATATTGTTGATATTCAAAGACAGGATGTGG | + |
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Preference number: 6 (lower is better) Translates to: IVDAGQKTLKGS*LILLIFKDRMW Trigger: CCACATCCTGTCTTTGAATATCAACAATATCAGTCAAGAACCTTTGAGTGTTTTCTGGCCAGCATCAACAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030568.14 ENSMUST00000169603.2 |
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