Pregenerated sensors for SELPLG (Mus musculus)
Ensembl gene IDs: ENSMUSG00000048163Ensembl transcript IDs: ENSMUST00000100874.6, ENSMUST00000201194.4, ENSMUST00000201931.2, ENSMUST00000202555.2
Found 99 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AAGGACCATCCCTCCAAGCCAGGGACCTGGGAAAGCCAGGCTACCTaGCACTGGAATCAGAGAAGCAGACATGGCGGCCTCCCACAAAGC | + |
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Preference number: 1 (lower is better) Translates to: KDHPSKPGTWESQAT*HWNQRSRHGGLPQS Trigger: GCTTTGTGGGAGGCCGCCATGTCTGCTTCTCTGATTCCAGTGGCAGGTAGCCTGGCTTTCCCAGGTCCCTGGCTTGGAGGGATGGTCCTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000100874.6 ENSMUST00000201194.4 ENSMUST00000202555.2 |
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| 3UTR CCA 90 bp | CTGGGAAAGCCAGGCTACCTGCCACTGGAATCAGAGAAGCAGACATaGCGGCCTCCCACAAAGCTCCTCTCTTACCGGGTTACCATGGCA | + |
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Preference number: 1 (lower is better) Translates to: LGKPGYLPLESEKQT*RPPTKLLSYRVTMA Trigger: TGCCATGGTAACCCGGTAAGAGAGGAGCTTTGTGGGAGGCCGCCATGTCTGCTTCTCTGATTCCAGTGGCAGGTAGCCTGGCTTTCCCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100874.6 |
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| 3UTR CCA 90 bp | TTCACACGGGCCCAAAGGAAGGACCATCCCTCCAAGCCAGGGACCTaGGAAAGCCAGGCTACCTGCCACTGGAATCAGAGAAGCAGACAT | + |
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Preference number: 1 (lower is better) Translates to: FTRAQRKDHPSKPGT*ESQATCHWNQRSRH Trigger: ATGTCTGCTTCTCTGATTCCAGTGGCAGGTAGCCTGGCTTTCCCAGGTCCCTGGCTTGGAGGGATGGTCCTTCCTTTGGGCCCGTGTGAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000100874.6 ENSMUST00000201194.4 ENSMUST00000202555.2 |
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| 3UTR CCA 90 bp | CTCTTACCGGGTTACCATGGCAACCAACAGAGTAGCTTTTGGGAGTaGAATAAGGGAGCTGAGTCTTTCTGGAGAACGCAAGGACAGGTA | + |
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Preference number: 1 (lower is better) Translates to: LLPGYHGNQQSSFWE*NKGAESFWRTQGQV Trigger: TACCTGTCCTTGCGTTCTCCAGAAAGACTCAGCTCCCTTATTCCACTCCCAAAAGCTACTCTGTTGGTTGCCATGGTAACCCGGTAAGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100874.6 |
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| 3UTR CCA 90 bp | GACTCAGCTATCGTTTATTATAATATGTTTATTGGATGCCTGTGCTaGGCCAGGCCGCAGCGCGAGGTCATTCTGTCACTGTACGGAAAC | + |
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Preference number: 1 (lower is better) Translates to: DSAIVYYNMFIGCLC*ARPQREVILSLYGN Trigger: GTTTCCGTACAGTGACAGAATGACCTCGCGCTGCGGCCTGGCCCAGCACAGGCATCCAATAAACATATTATAATAAACGATAGCTGAGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201931.2 |
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| 3UTR-3UTR CCA 90 bp | TGTTTATTGGATGCCTGTGCTGGGCCAGGCCGCAGCGCGAGGTCATTCTGTCACTCCAAGCCAGGGACCTaGGAAAGCCAGGCTACCTGC | + |
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Preference number: 2 (lower is better) Translates to: CLLDACAGPGRSARSFCHSKPGT*ESQATC Trigger: GCAGGTAGCCTGGCTTTCCCAGGTCCCTGGCTTGGA...GTGACAGAATGACCTCGCGCTGCGGCCTGGCCCAGCACAGGCATCCAATAAACA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000100874.6 ENSMUST00000201194.4 ENSMUST00000201931.2 ENSMUST00000202555.2 |
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| 3UTR-3UTR GCA 90 bp | TACCTGCCACTGGAATCAGAGAAGCAGACATGGCGGCCTCCCACAAAGCTCCTCAGGTATCCAGTGACCTaGAGGGAGACACACAGCGGT | + |
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Preference number: 2 (lower is better) Translates to: YLPLESEKQTWRPPTKLLRYPVT*RETHSG Trigger: ACCGCTGTGTGTCTCCCTGCAGGTCACTGGATACCT...GAGGAGCTTTGTGGGAGGCCGCCATGTCTGCTTCTCTGATTCCAGTGGCAGGTA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100874.6 |
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| 3UTR-3UTR CCA 90 bp | GTTTATTATAATATGTTTATTGGATGCCTGTGCTGGGCCAGGCCGCAGCGCGAGCAACAGAGTAGCTTTTaGGAGTGGAATAAGGGAGCT | + |
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Preference number: 2 (lower is better) Translates to: VYYNMFIGCLCWARPQREQQSSF*EWNKGA Trigger: AGCTCCCTTATTCCACTCCCAAAAGCTACTCTGTTG...CTCGCGCTGCGGCCTGGCCCAGCACAGGCATCCAATAAACATATTATAATAAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100874.6 |
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| 3UTR GCA 72 bp | CCCTCCAAGCCAGGGACCTGGGAAAGCCAGGCTACCTaGCACTGGAATCAGAGAAGCAGACATGGCGGCCTC | + |
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Preference number: 3 (lower is better) Translates to: PSKPGTWESQAT*HWNQRSRHGGL Trigger: GAGGCCGCCATGTCTGCTTCTCTGATTCCAGTGGCAGGTAGCCTGGCTTTCCCAGGTCCCTGGCTTGGAGGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000100874.6 ENSMUST00000201194.4 ENSMUST00000202555.2 |
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| 3UTR CCA 72 bp | GCCCAAAGGAAGGACCATCCCTCCAAGCCAGGGACCTaGGAAAGCCAGGCTACCTGCCACTGGAATCAGAGA | + |
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Preference number: 3 (lower is better) Translates to: AQRKDHPSKPGT*ESQATCHWNQR Trigger: TCTCTGATTCCAGTGGCAGGTAGCCTGGCTTTCCCAGGTCCCTGGCTTGGAGGGATGGTCCTTCCTTTGGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000100874.6 ENSMUST00000201194.4 ENSMUST00000202555.2 |
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| 3UTR CCA 72 bp | CCAGGCTACCTGCCACTGGAATCAGAGAAGCAGACATaGCGGCCTCCCACAAAGCTCCTCTCTTACCGGGTT | + |
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Preference number: 3 (lower is better) Translates to: PGYLPLESEKQT*RPPTKLLSYRV Trigger: AACCCGGTAAGAGAGGAGCTTTGTGGGAGGCCGCCATGTCTGCTTCTCTGATTCCAGTGGCAGGTAGCCTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100874.6 |
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| 3UTR CCA 72 bp | AGCTTTTGGGAGTGGAATAAGGGAGCTGAGTCTTTCTaGAGAACGCAAGGACAGGTATCCAGTGACCTGCAG | + |
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Preference number: 3 (lower is better) Translates to: SFWEWNKGAESF*RTQGQVSSDLQ Trigger: CTGCAGGTCACTGGATACCTGTCCTTGCGTTCTCCAGAAAGACTCAGCTCCCTTATTCCACTCCCAAAAGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100874.6 |
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| 3UTR CCA 72 bp | TTACCGGGTTACCATGGCAACCAACAGAGTAGCTTTTaGGAGTGGAATAAGGGAGCTGAGTCTTTCTGGAGA | + |
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Preference number: 3 (lower is better) Translates to: LPGYHGNQQSSF*EWNKGAESFWR Trigger: TCTCCAGAAAGACTCAGCTCCCTTATTCCACTCCCAAAAGCTACTCTGTTGGTTGCCATGGTAACCCGGTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100874.6 |
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| 3UTR CCA 72 bp | ATCGTTTATTATAATATGTTTATTGGATGCCTGTGCTaGGCCAGGCCGCAGCGCGAGGTCATTCTGTCACTG | + |
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Preference number: 3 (lower is better) Translates to: IVYYNMFIGCLC*ARPQREVILSL Trigger: CAGTGACAGAATGACCTCGCGCTGCGGCCTGGCCCAGCACAGGCATCCAATAAACATATTATAATAAACGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100874.6 ENSMUST00000201931.2 |
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| CDS-3UTR TCA 90 bp | GCCCAAAGGAAGGACCATCCCTCCAAGCCAGGGACCTGGGAAAGCCAGGCTACCCGTGGGTGCTGGCTTTaGGGTGTCTGCCTCCATGGG | + |
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Preference number: 4 (lower is better) Translates to: AQRKDHPSKPGTWESQATRGCWL*GVCLHG Trigger: CCCATGGAGGCAGACACCTCAAAGCCAGCACCCACG...GGTAGCCTGGCTTTCCCAGGTCCCTGGCTTGGAGGGATGGTCCTTCCTTTGGGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100874.6 |
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| CDS-3UTR TCA 90 bp | ACGGGCCCAAAGGAAGGACCATCCCTCCAAGCCAGGGACCTGGGAAAGCCAGGCCACCGGGATGAGATCTaGACTCCCTGGCAGGGTTGG | + |
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Preference number: 4 (lower is better) Translates to: TGPKEGPSLQARDLGKPGHRDEI*TPWQGW Trigger: CCAACCCTGCCAGGGAGTTCAGATCTCATCCCGGTG...GCCTGGCTTTCCCAGGTCCCTGGCTTGGAGGGATGGTCCTTCCTTTGGGCCCGT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000100874.6 ENSMUST00000201931.2 ENSMUST00000202555.2 |
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| CDS-3UTR GCA 90 bp | CGGGCCCAAAGGAAGGACCATCCCTCCAAGCCAGGGACCTGGGAAAGCCAGGCTTCCATGGGTGCTGGCTaGGAGGTGTCTGCCTCCATG | + |
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Preference number: 4 (lower is better) Translates to: RAQRKDHPSKPGTWESQASMGAG*EVSASM Trigger: CATGGAGGCAGACACCTCGCAGCCAGCACCCATGGA...AGCCTGGCTTTCCCAGGTCCCTGGCTTGGAGGGATGGTCCTTCCTTTGGGCCCG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100874.6 |
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| CDS-3UTR GCA 90 bp | CATCCCTCCAAGCCAGGGACCTGGGAAAGCCAGGCTACCTGCCACTGGAATCAGTGGCTGCGAGGTGTCTaGCTCCATGGGTGCTGGCTG | + |
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Preference number: 4 (lower is better) Translates to: HPSKPGTWESQATCHWNQWLRGV*LHGCWL Trigger: CAGCCAGCACCCATGGAGGCAGACACCTCGCAGCCA...CTGATTCCAGTGGCAGGTAGCCTGGCTTTCCCAGGTCCCTGGCTTGGAGGGATG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100874.6 |
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| CDS-3UTR GCA 90 bp | CCCTCCAAGCCAGGGACCTGGGAAAGCCAGGCTACCTGCCACTGGAATCAGAGAGTCTGCCTCCATGGGTaGTGGCTGCGAGGTGTCTGC | + |
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Preference number: 4 (lower is better) Translates to: PSKPGTWESQATCHWNQRVCLHG*WLRGVC Trigger: GCAGACACCTCGCAGCCAGCACCCATGGAGGCAGAC...TCTCTGATTCCAGTGGCAGGTAGCCTGGCTTTCCCAGGTCCCTGGCTTGGAGGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100874.6 |
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| CDS-3UTR GCA 90 bp | CACACGGGCCCAAAGGAAGGACCATCCCTCCAAGCCAGGGACCTGGGAAAGCCATGGCTGAGAGGTCTCTaGCTCCGTGGGTGCTGGCTT | + |
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Preference number: 4 (lower is better) Translates to: HTGPKEGPSLQARDLGKPWLRGL*LRGCWL Trigger: AAGCCAGCACCCACGGAGGCAGAGACCTCTCAGCCA...TGGCTTTCCCAGGTCCCTGGCTTGGAGGGATGGTCCTTCCTTTGGGCCCGTGTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100874.6 |
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| CDS-3UTR GCA 90 bp | GCCCAAAGGAAGGACCATCCCTCCAAGCCAGGGACCTGGGAAAGCCAGGCTACCCCGCCAGCACCACTGTaGACACGAGGAAGATGGTGG | + |
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Preference number: 4 (lower is better) Translates to: AQRKDHPSKPGTWESQATPPAPL*TRGRWW Trigger: CCACCATCTTCCTCGTGTGCACAGTGGTGCTGGCGG...GGTAGCCTGGCTTTCCCAGGTCCCTGGCTTGGAGGGATGGTCCTTCCTTTGGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000100874.6 ENSMUST00000201194.4 ENSMUST00000201931.2 ENSMUST00000202555.2 |
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| CDS-3UTR GCA 90 bp | CACACGGGCCCAAAGGAAGGACCATCCCTCCAAGCCAGGGACCTGGGAAAGCCACCGCCAGCACCACTGTaGACACGAGGAAGATGGTGG | + |
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Preference number: 4 (lower is better) Translates to: HTGPKEGPSLQARDLGKPPPAPL*TRGRWW Trigger: CCACCATCTTCCTCGTGTGCACAGTGGTGCTGGCGG...TGGCTTTCCCAGGTCCCTGGCTTGGAGGGATGGTCCTTCCTTTGGGCCCGTGTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000100874.6 ENSMUST00000201194.4 ENSMUST00000201931.2 ENSMUST00000202555.2 |
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| CDS-3UTR CCA 90 bp | GCCCAAAGGAAGGACCATCCCTCCAAGCCAGGGACCTGGGAAAGCCAGGCTACCCATGACCACGGTGGTTaGCAGCTCAGGGTGAGCAGC | + |
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Preference number: 4 (lower is better) Translates to: AQRKDHPSKPGTWESQATHDHGG*QLRVSS Trigger: GCTGCTCACCCTGAGCTGCCAACCACCGTGGTCATG...GGTAGCCTGGCTTTCCCAGGTCCCTGGCTTGGAGGGATGGTCCTTCCTTTGGGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100874.6 |
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| CDS-3UTR CCA 90 bp | GCCCAAAGGAAGGACCATCCCTCCAAGCCAGGGACCTGGGAAAGCCAGGCTACCAGGTCTCTGCCTCCATaGGTGCTGGCTGCGAGGTCT | + |
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Preference number: 4 (lower is better) Translates to: AQRKDHPSKPGTWESQATRSLPP*VLAARS Trigger: AGACCTCGCAGCCAGCACCCATGGAGGCAGAGACCT...GGTAGCCTGGCTTTCCCAGGTCCCTGGCTTGGAGGGATGGTCCTTCCTTTGGGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100874.6 |
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| CDS-3UTR CCA 90 bp | ACCATCCCTCCAAGCCAGGGACCTGGGAAAGCCAGGCTACCTGCCACTGGAATCTCAGGTCCTGGACCTTaGGCAGGCCCCCATTGGCTG | + |
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Preference number: 4 (lower is better) Translates to: TIPPSQGPGKARLPATGISGPGP*AGPHWL Trigger: CAGCCAATGGGGGCCTGCCCAAGGTCCAGGACCTGA...GATTCCAGTGGCAGGTAGCCTGGCTTTCCCAGGTCCCTGGCTTGGAGGGATGGT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000100874.6 |
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| CDS-3UTR CCA 90 bp | AAGGACCATCCCTCCAAGCCAGGGACCTGGGAAAGCCAGGCTACCTGCCACTGGTCTGTCTTCAGGTCCTaGACCTTGGGCAGGCCCCCA | + |
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Preference number: 4 (lower is better) Translates to: KDHPSKPGTWESQATCHWSVFRS*TLGRPP Trigger: TGGGGGCCTGCCCAAGGTCCAGGACCTGAAGACAGA...CCAGTGGCAGGTAGCCTGGCTTTCCCAGGTCCCTGGCTTGGAGGGATGGTCCTT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000100874.6 |
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| CDS-3UTR TCA 90 bp | TTATTGGATGCCTGTGCTGGGCCAGGCCGCAGCGCGAGGTCATTCTGTCACTGTGTTGGCAGCTCAGGGTaGGCAGCCACGGTGTTGGTG | + |
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Preference number: 4 (lower is better) Translates to: LLDACAGPGRSARSFCHCVGSSG*AATVLV Trigger: CACCAACACCGTGGCTGCTCACCCTGAGCTGCCAAC...ACAGTGACAGAATGACCTCGCGCTGCGGCCTGGCCCAGCACAGGCATCCAATAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100874.6 |
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| CDS-3UTR TCA 90 bp | ACACGGGCCCAAAGGAAGGACCATCCCTCCAAGCCAGGGACCTGGGAAAGCCAGCAGGGTTGGGGCAGGTaGATTCCCAGGGGTCACAAT | + |
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Preference number: 4 (lower is better) Translates to: TRAQRKDHPSKPGTWESQQGWGR*IPRGHN Trigger: ATTGTGACCCCTGGGAATTCACCTGCCCCAACCCTG...CTGGCTTTCCCAGGTCCCTGGCTTGGAGGGATGGTCCTTCCTTTGGGCCCGTGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000100874.6 ENSMUST00000201931.2 |
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| CDS-3UTR TCA 90 bp | CCTGGGAAAGCCAGGCTACCTGCCACTGGAATCAGAGAAGCAGACATGGCGGCCCACCGGGATGAGATCTaGACTCCCTGGCAGGGTTGG | + |
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Preference number: 4 (lower is better) Translates to: PGKARLPATGIREADMAAHRDEI*TPWQGW Trigger: CCAACCCTGCCAGGGAGTTCAGATCTCATCCCGGTG...GGCCGCCATGTCTGCTTCTCTGATTCCAGTGGCAGGTAGCCTGGCTTTCCCAGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100874.6 ENSMUST00000202555.2 |
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| CDS-3UTR GCA 90 bp | GTTCACACGGGCCCAAAGGAAGGACCATCCCTCCAAGCCAGGGACCTGGGAAAGCCGCCAGCACCACTGTaGACACGAGGAAGATGGTGG | + |
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Preference number: 4 (lower is better) Translates to: VHTGPKEGPSLQARDLGKPPAPL*TRGRWW Trigger: CCACCATCTTCCTCGTGTGCACAGTGGTGCTGGCGG...CTTTCCCAGGTCCCTGGCTTGGAGGGATGGTCCTTCCTTTGGGCCCGTGTGAAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000100874.6 ENSMUST00000201194.4 ENSMUST00000201931.2 ENSMUST00000202555.2 |
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| CDS-3UTR GCA 90 bp | ATTGGATGCCTGTGCTGGGCCAGGCCGCAGCGCGAGGTCATTCTGTCACTGTACCCGCCAGCACCACTGTaGACACGAGGAAGATGGTGG | + |
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Preference number: 4 (lower is better) Translates to: IGCLCWARPQREVILSLYPPAPL*TRGRWW Trigger: CCACCATCTTCCTCGTGTGCACAGTGGTGCTGGCGG...GTACAGTGACAGAATGACCTCGCGCTGCGGCCTGGCCCAGCACAGGCATCCAAT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000100874.6 ENSMUST00000201194.4 ENSMUST00000201931.2 ENSMUST00000202555.2 |
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| CDS-3UTR CCA 90 bp | GTTTATTGGATGCCTGTGCTGGGCCAGGCCGCAGCGCGAGGTCATTCTGTCACTTGCCTCCATGGGTGCTaGCTGCGAGGTCTCTGCCTC | + |
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Preference number: 4 (lower is better) Translates to: VYWMPVLGQAAARGHSVTCLHGC*LRGLCL Trigger: GAGGCAGAGACCTCGCAGCCAGCACCCATGGAGGCA...AGTGACAGAATGACCTCGCGCTGCGGCCTGGCCCAGCACAGGCATCCAATAAAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100874.6 |
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| CDS-3UTR CCA 90 bp | AGGACCATCCCTCCAAGCCAGGGACCTGGGAAAGCCAGGCTACCTGCCACTGGAAGGTCTCTGCCTCCGTaGGTGCTGGCTTTGAGGTCT | + |
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Preference number: 4 (lower is better) Translates to: RTIPPSQGPGKARLPATGRSLPP*VLALRS Trigger: AGACCTCAAAGCCAGCACCCACGGAGGCAGAGACCT...TCCAGTGGCAGGTAGCCTGGCTTTCCCAGGTCCCTGGCTTGGAGGGATGGTCCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100874.6 |
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| CDS-3UTR CCA 90 bp | ACGGGCCCAAAGGAAGGACCATCCCTCCAAGCCAGGGACCTGGGAAAGCCAGGCAGGTCTCTGCCTCCGTaGGTGCTGGTTTTGAGGTCT | + |
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Preference number: 4 (lower is better) Translates to: TGPKEGPSLQARDLGKPGRSLPP*VLVLRS Trigger: AGACCTCAAAACCAGCACCCACGGAGGCAGAGACCT...GCCTGGCTTTCCCAGGTCCCTGGCTTGGAGGGATGGTCCTTCCTTTGGGCCCGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100874.6 |
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| CDS-3UTR CCA 90 bp | GTTTATTGGATGCCTGTGCTGGGCCAGGCCGCAGCGCGAGGTCATTCTGTCACTTCCTGGGAAGCTGGGTaGTCTCTGCCTCCGTGGGTG | + |
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Preference number: 4 (lower is better) Translates to: VYWMPVLGQAAARGHSVTSWEAG*SLPPWV Trigger: CACCCACGGAGGCAGAGACCACCCAGCTTCCCAGGA...AGTGACAGAATGACCTCGCGCTGCGGCCTGGCCCAGCACAGGCATCCAATAAAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100874.6 ENSMUST00000201931.2 |
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| CDS-3UTR CCA 90 bp | AAGGACCATCCCTCCAAGCCAGGGACCTGGGAAAGCCAGGCTACCTGCCACTGGCGCACTGGGTACATGTaGGTCTTACGGGACAGACGG | + |
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Preference number: 4 (lower is better) Translates to: KDHPSKPGTWESQATCHWRTGYM*VLRDRR Trigger: CCGTCTGTCCCGTAAGACCCACATGTACCCAGTGCG...CCAGTGGCAGGTAGCCTGGCTTTCCCAGGTCCCTGGCTTGGAGGGATGGTCCTT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100874.6 |
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| CDS-3UTR TCA 90 bp | GGTTCACACGGGCCCAAAGGAAGGACCATCCCTCCAAGCCAGGGACCTGGGAAACAGGGTTGGGGCAGGTaGATTCCCAGGGGTCACAAT | + |
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Preference number: 4 (lower is better) Translates to: GSHGPKGRTIPPSQGPGKQGWGR*IPRGHN Trigger: ATTGTGACCCCTGGGAATTCACCTGCCCCAACCCTG...TTTCCCAGGTCCCTGGCTTGGAGGGATGGTCCTTCCTTTGGGCCCGTGTGAACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000100874.6 ENSMUST00000201931.2 |
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| CDS-3UTR GCA 90 bp | CAGGCTACCTGCCACTGGAATCAGAGAAGCAGACATGGCGGCCTCCCACAAAGCCTCTGCCTCCATGGGTaGTGGCTGCGAGGTCTCTAC | + |
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Preference number: 4 (lower is better) Translates to: QATCHWNQRSRHGGLPQSLCLHG*WLRGLY Trigger: GTAGAGACCTCGCAGCCAGCACCCATGGAGGCAGAG...GCTTTGTGGGAGGCCGCCATGTCTGCTTCTCTGATTCCAGTGGCAGGTAGCCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100874.6 |
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| CDS-3UTR GCA 90 bp | ACCTGCCACTGGAATCAGAGAAGCAGACATGGCGGCCTCCCACAAAGCTCCTCTTGGCTGCGAGGTCTCTaGCTCCATGGGTGCTGGCTG | + |
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Preference number: 4 (lower is better) Translates to: TCHWNQRSRHGGLPQSSSWLRGL*LHGCWL Trigger: CAGCCAGCACCCATGGAGGCAGAGACCTCGCAGCCA...AGAGGAGCTTTGTGGGAGGCCGCCATGTCTGCTTCTCTGATTCCAGTGGCAGGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100874.6 |
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| CDS-3UTR GCA 90 bp | CAGGCTACCTGCCACTGGAATCAGAGAAGCAGACATGGCGGCCTCCCACAAAGCCTCTGCCTCGTTGGGTaGTGGCTGAGAGGTCTCTGC | + |
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Preference number: 4 (lower is better) Translates to: QATCHWNQRSRHGGLPQSLCLVG*WLRGLC Trigger: GCAGAGACCTCTCAGCCAGCACCCAACGAGGCAGAG...GCTTTGTGGGAGGCCGCCATGTCTGCTTCTCTGATTCCAGTGGCAGGTAGCCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100874.6 |
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| CDS-3UTR GCA 90 bp | AAAGGAAGGACCATCCCTCCAAGCCAGGGACCTGGGAAAGCCAGGCTACCTGCCAAGCTGGGTGGTCTCTaGCTCCGTGGGTGCTGGTTT | + |
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Preference number: 4 (lower is better) Translates to: KGRTIPPSQGPGKARLPAKLGGL*LRGCWF Trigger: AAACCAGCACCCACGGAGGCAGAGACCACCCAGCTT...GGCAGGTAGCCTGGCTTTCCCAGGTCCCTGGCTTGGAGGGATGGTCCTTCCTTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100874.6 ENSMUST00000201931.2 |
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| CDS-3UTR CCA 90 bp | ACCTGCCACTGGAATCAGAGAAGCAGACATGGCGGCCTCCCACAAAGCTCCTCTTGCCTCCATGGGTGCTaGCTGCGAGGTGTCTGCCTC | + |
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Preference number: 4 (lower is better) Translates to: TCHWNQRSRHGGLPQSSSCLHGC*LRGVCL Trigger: GAGGCAGACACCTCGCAGCCAGCACCCATGGAGGCA...AGAGGAGCTTTGTGGGAGGCCGCCATGTCTGCTTCTCTGATTCCAGTGGCAGGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100874.6 |
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| CDS-3UTR CCA 90 bp | AGGGACCTGGGAAAGCCAGGCTACCTGCCACTGGAATCAGAGAAGCAGACATGGTCCTGGGAAGCTGGGTaGTCTCTGCCTCCGTGGGTG | + |
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Preference number: 4 (lower is better) Translates to: RDLGKPGYLPLESEKQTWSWEAG*SLPPWV Trigger: CACCCACGGAGGCAGAGACCACCCAGCTTCCCAGGA...CCATGTCTGCTTCTCTGATTCCAGTGGCAGGTAGCCTGGCTTTCCCAGGTCCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100874.6 |
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| CDS-3UTR TCA 90 bp | TATGTTTATTGGATGCCTGTGCTGGGCCAGGCCGCAGCGCGAGGTCATTCTGTCCACCGGGATGAGATCTaGACTCCCTGGCAGGGTTGG | + |
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Preference number: 4 (lower is better) Translates to: YVYWMPVLGQAAARGHSVHRDEI*TPWQGW Trigger: CCAACCCTGCCAGGGAGTTCAGATCTCATCCCGGTG...GACAGAATGACCTCGCGCTGCGGCCTGGCCCAGCACAGGCATCCAATAAACATA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000100874.6 ENSMUST00000201931.2 ENSMUST00000202555.2 |
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| CDS-3UTR GCA 90 bp | GACAGGTATCCAGTGACCTGCAGGGAGACACACAGCGGTGGGCGCTCTAAAGACGCAGCTGAAGGCTGTTaGCAGGGCCCAAGATGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: DRYPVTCRETHSGGRSKDAAEGC*QGPRWS Trigger: TGACCATCTTGGGCCCTGGCAACAGCCTTCAGCTGC...GTCTTTAGAGCGCCCACCGCTGTGTGTCTCCCTGCAGGTCACTGGATACCTGTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100874.6 |
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| CDS-3UTR GCA 90 bp | GTTCACACGGGCCCAAAGGAAGGACCATCCCTCCAAGCCAGGGACCTGGGAAAGGTGTGGCAGAGTCTGTaGTCAGCATCCCAACAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: VHTGPKEGPSLQARDLGKVWQSL*SASQQL Trigger: CAGCTGTTGGGATGCTGAGCACAGACTCTGCCACAC...CTTTCCCAGGTCCCTGGCTTGGAGGGATGGTCCTTCCTTTGGGCCCGTGTGAAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100874.6 |
||
| CDS-3UTR GCA 90 bp | TGTTTATTGGATGCCTGTGCTGGGCCAGGCCGCAGCGCGAGGTCATTCTGTCACTCCATGGGTGCTGGCTaGGAGGTCTCTACCTCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: CLLDACAGPGRSARSFCHSMGAG*EVSTSV Trigger: CACAGAGGTAGAGACCTCGCAGCCAGCACCCATGGA...GTGACAGAATGACCTCGCGCTGCGGCCTGGCCCAGCACAGGCATCCAATAAACA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100874.6 |
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| CDS-3UTR CCA 90 bp | TATTGGATGCCTGTGCTGGGCCAGGCCGCAGCGCGAGGTCATTCTGTCACTGTATGCCAGGGCCCAAGATaGTCAGCAGCACAAGGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: YWMPVLGQAAARGHSVTVCQGPR*SAAQGS Trigger: GCTTCCTTGTGCTGCTGACCATCTTGGGCCCTGGCA...TACAGTGACAGAATGACCTCGCGCTGCGGCCTGGCCCAGCACAGGCATCCAATA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100874.6 |
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| CDS-3UTR CCA 90 bp | TTATTGGATGCCTGTGCTGGGCCAGGCCGCAGCGCGAGGTCATTCTGTCACTGTTGTCCCTCCTGTACCTaGGGCAGTAGGGTCAGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: LLDACAGPGRSARSFCHCCPSCT*GSRVSG Trigger: ACCACTGACCCTACTGCCCCAGGTACAGGAGGGACA...ACAGTGACAGAATGACCTCGCGCTGCGGCCTGGCCCAGCACAGGCATCCAATAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100874.6 |
||
| CDS-3UTR CCA 90 bp | CAAAGGAAGGACCATCCCTCCAAGCCAGGGACCTGGGAAAGCCAGGCTACCTGCTGGTCTCTGCCTCCGTaGGTGCTGGTTTTGAGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: QRKDHPSKPGTWESQATCWSLPP*VLVLRS Trigger: AGACCTCAAAACCAGCACCCACGGAGGCAGAGACCA...GCAGGTAGCCTGGCTTTCCCAGGTCCCTGGCTTGGAGGGATGGTCCTTCCTTTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100874.6 ENSMUST00000201931.2 |
||
| CDS-3UTR CCA 90 bp | CACACGGGCCCAAAGGAAGGACCATCCCTCCAAGCCAGGGACCTGGGAAAGCCATTACAGCCTGAATCCTaGGAAGCTGGGTGGTCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: HTGPKEGPSLQARDLGKPLQPES*EAGWSL Trigger: CAGAGACCACCCAGCTTCCCAGGATTCAGGCTGTAA...TGGCTTTCCCAGGTCCCTGGCTTGGAGGGATGGTCCTTCCTTTGGGCCCGTGTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100874.6 ENSMUST00000201931.2 |
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| CDS-3UTR CCA 90 bp | ACACGGGCCCAAAGGAAGGACCATCCCTCCAAGCCAGGGACCTGGGAAAGCCAGTTACAGCCTGAATCCTaGGAAGCTGGGTGGTCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: TRAQRKDHPSKPGTWESQLQPES*EAGWSL Trigger: CAGAGACCACCCAGCTTCCCAGGATTCAGGCTGTAA...CTGGCTTTCCCAGGTCCCTGGCTTGGAGGGATGGTCCTTCCTTTGGGCCCGTGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100874.6 ENSMUST00000201931.2 |
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| CDS-3UTR CCA 90 bp | GGAAAGCCAGGCTACCTGCCACTGGAATCAGAGAAGCAGACATGGCGGCCTCCCGTGACTGGGTACATGTaGGTCTTACGGGACAGACGG | + |
|
Preference number: 4 (lower is better) Translates to: GKPGYLPLESEKQTWRPPVTGYM*VLRDRR Trigger: CCGTCTGTCCCGTAAGACCCACATGTACCCAGTCAC...GGGAGGCCGCCATGTCTGCTTCTCTGATTCCAGTGGCAGGTAGCCTGGCTTTCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201194.4 |
||
| CDS-3UTR GCA 90 bp | CCAGGGACCTGGGAAAGCCAGGCTACCTGCCACTGGAATCAGAGAAGCAGACATAAGCTGGGTGGTCTCTaGCTCCGTGGGTGCTGGTTT | + |
|
Preference number: 4 (lower is better) Translates to: PGTWESQATCHWNQRSRHKLGGL*LRGCWF Trigger: AAACCAGCACCCACGGAGGCAGAGACCACCCAGCTT...ATGTCTGCTTCTCTGATTCCAGTGGCAGGTAGCCTGGCTTTCCCAGGTCCCTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100874.6 |
||
| CDS-3UTR CCA 90 bp | CCAAAGGAAGGACCATCCCTCCAAGCCAGGGACCTGGGAAAGCCAGGCTACCTGAGGTCTCTACCTCTGTaGATGCTGGTTGGACGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: PKEGPSLQARDLGKPGYLRSLPL*MLVGRS Trigger: AGACCGTCCAACCAGCATCCACAGAGGTAGAGACCT...CAGGTAGCCTGGCTTTCCCAGGTCCCTGGCTTGGAGGGATGGTCCTTCCTTTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100874.6 |
||
| CDS-3UTR CCA 90 bp | ACCATCCCTCCAAGCCAGGGACCTGGGAAAGCCAGGCTACCTGCCACTGGAATCTGCACACGAGGAAGATaGTGGCCAGAGAAGCCAAGA | + |
|
Preference number: 4 (lower is better) Translates to: TIPPSQGPGKARLPATGICTRGR*WPEKPR Trigger: TCTTGGCTTCTCTGGCCACCATCTTCCTCGTGTGCA...GATTCCAGTGGCAGGTAGCCTGGCTTTCCCAGGTCCCTGGCTTGGAGGGATGGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000100874.6 ENSMUST00000201194.4 ENSMUST00000202555.2 |
||
| CDS-3UTR CCA 90 bp | CAAAGGAAGGACCATCCCTCCAAGCCAGGGACCTGGGAAAGCCAGGCTACCTGCTGCACACGAGGAAGATaGTGGCCAGAGAAGCCAAGA | + |
|
Preference number: 4 (lower is better) Translates to: QRKDHPSKPGTWESQATCCTRGR*WPEKPR Trigger: TCTTGGCTTCTCTGGCCACCATCTTCCTCGTGTGCA...GCAGGTAGCCTGGCTTTCCCAGGTCCCTGGCTTGGAGGGATGGTCCTTCCTTTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000100874.6 ENSMUST00000201194.4 ENSMUST00000201931.2 ENSMUST00000202555.2 |
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| CDS-3UTR CCA 90 bp | CATCCCTCCAAGCCAGGGACCTGGGAAAGCCAGGCTACCTGCCACTGGAATCAGTGCACACGAGGAAGATaGTGGCCAGAGAAGCCAAGA | + |
|
Preference number: 4 (lower is better) Translates to: HPSKPGTWESQATCHWNQCTRGR*WPEKPR Trigger: TCTTGGCTTCTCTGGCCACCATCTTCCTCGTGTGCA...CTGATTCCAGTGGCAGGTAGCCTGGCTTTCCCAGGTCCCTGGCTTGGAGGGATG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000100874.6 ENSMUST00000201194.4 ENSMUST00000202555.2 |
||
| CDS-3UTR GCA 90 bp | CGTGAATACATTTCACCCAGGAAGCCCAGATCTATGACCTCTGTGACCAGCGGGTCCATGGGTGCTGGCTaGGAGGTCTCTGCCTCCATG | + |
|
Preference number: 4 (lower is better) Translates to: REYISPRKPRSMTSVTSGSMGAG*EVSASM Trigger: CATGGAGGCAGAGACCTCGCAGCCAGCACCCATGGA...CCCGCTGGTCACAGAGGTCATAGATCTGGGCTTCCTGGGTGAAATGTATTCACG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100874.6 |
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| CDS-3UTR CCA 90 bp | TACCTGCCACTGGAATCAGAGAAGCAGACATGGCGGCCTCCCACAAAGCTCCTCTGGTCTCTGCCTCCGTaGGTGCTGGTTTTGAGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: YLPLESEKQTWRPPTKLLWSLPP*VLVLRS Trigger: AGACCTCAAAACCAGCACCCACGGAGGCAGAGACCA...GAGGAGCTTTGTGGGAGGCCGCCATGTCTGCTTCTCTGATTCCAGTGGCAGGTA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100874.6 |
||
| CDS-3UTR TCA 90 bp | TCGTTTATTATAATATGTTTATTGGATGCCTGTGCTGGGCCAGGCCGCAGCGCGTCGTTGGGTGCTGGCTaGGAGGTCTCTGCCTCCGTG | + |
|
Preference number: 4 (lower is better) Translates to: SFIIICLLDACAGPGRSASLGAG*EVSASV Trigger: CACGGAGGCAGAGACCTCTCAGCCAGCACCCAACGA...CGCGCTGCGGCCTGGCCCAGCACAGGCATCCAATAAACATATTATAATAAACGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100874.6 |
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| CDS-3UTR TCA 90 bp | GACCTGGGAAAGCCAGGCTACCTGCCACTGGAATCAGAGAAGCAGACATGGCGGAGAGTTTTTACAGCCTaGATCCTGGGAAGCTGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: DLGKPGYLPLESEKQTWRRVFTA*ILGSWV Trigger: CACCCAGCTTCCCAGGATTCAGGCTGTAAAAACTCT...CCGCCATGTCTGCTTCTCTGATTCCAGTGGCAGGTAGCCTGGCTTTCCCAGGTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000100874.6 |
||
| CDS-3UTR CCA 90 bp | ACACGGGCCCAAAGGAAGGACCATCCCTCCAAGCCAGGGACCTGGGAAAGCCAGCAACAGAGTAGCTTTTaGGAGTGGAATAAGGGAGCT | + |
|
Preference number: 4 (lower is better) Translates to: TRAQRKDHPSKPGTWESQQQSSF*EWNKGA Trigger: AGCTCCCTTATTCCACTCCCAAAAGCTACTCTGTTG...CTGGCTTTCCCAGGTCCCTGGCTTGGAGGGATGGTCCTTCCTTTGGGCCCGTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000201194.4 ENSMUST00000201931.2 ENSMUST00000202555.2 |
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| CDS-3UTR GCA 90 bp | TCGTTTATTATAATATGTTTATTGGATGCCTGTGCTGGGCCAGGCCGCAGCGCGTCATCCCCAACCACCTaGCTCCGTTCCCGGAGATGC | + |
|
Preference number: 4 (lower is better) Translates to: SFIIICLLDACAGPGRSASSPTT*LRSRRC Trigger: GCATCTCCGGGAACGGAGGCAGGTGGTTGGGGATGA...CGCGCTGCGGCCTGGCCCAGCACAGGCATCCAATAAACATATTATAATAAACGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100874.6 |
||
| CDS-3UTR CCA 90 bp | CCACTGGAATCAGAGAAGCAGACATGGCGGCCTCCCACAAAGCTCCTCTCTTACTGCACACGAGGAAGATaGTGGCCAGAGAAGCCAAGA | + |
|
Preference number: 4 (lower is better) Translates to: PLESEKQTWRPPTKLLSYCTRGR*WPEKPR Trigger: TCTTGGCTTCTCTGGCCACCATCTTCCTCGTGTGCA...GTAAGAGAGGAGCTTTGTGGGAGGCCGCCATGTCTGCTTCTCTGATTCCAGTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100874.6 |
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| CDS-3UTR CCA 90 bp | TTCACACGGGCCCAAAGGAAGGACCATCCCTCCAAGCCAGGGACCTGGGAAAGCAGTAGCTTTTGGGAGTaGAATAAGGGAGCTGAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: FTRAQRKDHPSKPGTWESSSFWE*NKGAES Trigger: AGACTCAGCTCCCTTATTCCACTCCCAAAAGCTACT...GCTTTCCCAGGTCCCTGGCTTGGAGGGATGGTCCTTCCTTTGGGCCCGTGTGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000201194.4 ENSMUST00000201931.2 ENSMUST00000202555.2 |
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| CDS-3UTR CCA 90 bp | CAAAGGAAGGACCATCCCTCCAAGCCAGGGACCTGGGAAAGCCAGGCTACCTGCAGTAGCTTTTGGGAGTaGAATAAGGGAGCTGAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: QRKDHPSKPGTWESQATCSSFWE*NKGAES Trigger: AGACTCAGCTCCCTTATTCCACTCCCAAAAGCTACT...GCAGGTAGCCTGGCTTTCCCAGGTCCCTGGCTTGGAGGGATGGTCCTTCCTTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000201194.4 ENSMUST00000201931.2 ENSMUST00000202555.2 |
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| CDS-3UTR CCA 90 bp | CATCCCTCCAAGCCAGGGACCTGGGAAAGCCAGGCTACCTGCCACTGGAATCAGCAACAGAGTAGCTTTTaGGAGTGGAATAAGGGAGCT | + |
|
Preference number: 4 (lower is better) Translates to: HPSKPGTWESQATCHWNQQQSSF*EWNKGA Trigger: AGCTCCCTTATTCCACTCCCAAAAGCTACTCTGTTG...CTGATTCCAGTGGCAGGTAGCCTGGCTTTCCCAGGTCCCTGGCTTGGAGGGATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000201194.4 ENSMUST00000202555.2 |
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| CDS-3UTR CCA 90 bp | ATTGGATGCCTGTGCTGGGCCAGGCCGCAGCGCGAGGTCATTCTGTCACTGTACCAACAGAGTAGCTTTTaGGAGTGGAATAAGGGAGCT | + |
|
Preference number: 4 (lower is better) Translates to: IGCLCWARPQREVILSLYQQSSF*EWNKGA Trigger: AGCTCCCTTATTCCACTCCCAAAAGCTACTCTGTTG...GTACAGTGACAGAATGACCTCGCGCTGCGGCCTGGCCCAGCACAGGCATCCAAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000201194.4 ENSMUST00000201931.2 ENSMUST00000202555.2 |
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| CDS-3UTR TCA 90 bp | TGCAGGGAGACACACAGCGGTGGGCGCTCTAAAGACTCCCGTGAATACATTTCAAATCTCTCTCTAGCATaGCCACGGTGGTTGGCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: CRETHSGGRSKDSREYISNLSLA*PRWLAA Trigger: AGCTGCCAACCACCGTGGTCATGCTAGAGAGAGATT...TGAAATGTATTCACGGGAGTCTTTAGAGCGCCCACCGCTGTGTGTCTCCCTGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100874.6 |
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| CDS-3UTR CCA 90 bp | GTTTATTGGATGCCTGTGCTGGGCCAGGCCGCAGCGCGAGGTCATTCTGTCACTAGTAGCTTTTGGGAGTaGAATAAGGGAGCTGAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: VYWMPVLGQAAARGHSVTSSFWE*NKGAES Trigger: AGACTCAGCTCCCTTATTCCACTCCCAAAAGCTACT...AGTGACAGAATGACCTCGCGCTGCGGCCTGGCCCAGCACAGGCATCCAATAAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000201194.4 ENSMUST00000201931.2 ENSMUST00000202555.2 |
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| CDS-3UTR CCA 90 bp | TTTATTGGATGCCTGTGCTGGGCCAGGCCGCAGCGCGAGGTCATTCTGTCACTGATTTTTCAGCAATTCTaGGGGGTCTGTGTTATACGT | + |
|
Preference number: 4 (lower is better) Translates to: FIGCLCWARPQREVILSLIFQQF*GVCVIR Trigger: ACGTATAACACAGACCCCCCAGAATTGCTGAAAAAT...CAGTGACAGAATGACCTCGCGCTGCGGCCTGGCCCAGCACAGGCATCCAATAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000100874.6 |
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| CDS-3UTR CAA 90 bp | GGAAAGCCAGGCTACCTGCCACTGGAATCAGAGAAGCAGACATGGCGGCCTCCCCCGTGGGTGCTGGCTTaGAGGTCTCTGCCTCCGTGG | + |
|
Preference number: 5 (lower is better) Translates to: GKPGYLPLESEKQTWRPPPWVLA*RSLPPW Trigger: CCACGGAGGCAGAGACCTCAAAGCCAGCACCCACGG...GGGAGGCCGCCATGTCTGCTTCTCTGATTCCAGTGGCAGGTAGCCTGGCTTTCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000100874.6 |
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| CDS-3UTR CAA 90 bp | AGGACCATCCCTCCAAGCCAGGGACCTGGGAAAGCCAGGCTACCTGCCACTGGATTCAGGTCCTGGACCTaGGGCAGGCCCCCATTGGCT | + |
|
Preference number: 5 (lower is better) Translates to: RTIPPSQGPGKARLPATGFRSWT*GRPPLA Trigger: AGCCAATGGGGGCCTGCCCAAGGTCCAGGACCTGAA...TCCAGTGGCAGGTAGCCTGGCTTTCCCAGGTCCCTGGCTTGGAGGGATGGTCCT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000100874.6 |
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| CDS CCA 90 bp | CAGGGACGAGATGCAGATCATCTCCGTGGGGGAGTAGTTCCGCACTaGGTACATGTGGGTCTTACGGGACAGACGGACCGCCAGCACCAC | + |
|
Preference number: 5 (lower is better) Translates to: QGRDADHLRGGVVPH*VHVGLTGQTDRQHH Trigger: GTGGTGCTGGCGGTCCGTCTGTCCCGTAAGACCCACATGTACCCAGTGCGGAACTACTCCCCCACGGAGATGATCTGCATCTCGTCCCTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000100874.6 |
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| CDS-3UTR CAA 90 bp | CTGGGAAAGCCAGGCTACCTGCCACTGGAATCAGAGAAGCAGACATGGCGGCCTCCGTGGGTGCTGGCTTaGAGGTGTCTGCCTCCATGG | + |
|
Preference number: 5 (lower is better) Translates to: LGKPGYLPLESEKQTWRPPWVLA*RCLPPW Trigger: CCATGGAGGCAGACACCTCAAAGCCAGCACCCACGG...AGGCCGCCATGTCTGCTTCTCTGATTCCAGTGGCAGGTAGCCTGGCTTTCCCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100874.6 |
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| CDS-3UTR CAA 90 bp | TATTGGATGCCTGTGCTGGGCCAGGCCGCAGCGCGAGGTCATTCTGTCACTGTAAACTCCCTGGCAGGGTaGGGGCAGGTGAATTCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: YWMPVLGQAAARGHSVTVNSLAG*GQVNSQ Trigger: CTGGGAATTCACCTGCCCCAACCCTGCCAGGGAGTT...TACAGTGACAGAATGACCTCGCGCTGCGGCCTGGCCCAGCACAGGCATCCAATA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100874.6 ENSMUST00000201931.2 |
||
| CDS-3UTR CAA 90 bp | CCAGGGACCTGGGAAAGCCAGGCTACCTGCCACTGGAATCAGAGAAGCAGACATAACTCCCTGGCAGGGTaGGGGCAGGTGAATTCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: PGTWESQATCHWNQRSRHNSLAG*GQVNSQ Trigger: CTGGGAATTCACCTGCCCCAACCCTGCCAGGGAGTT...ATGTCTGCTTCTCTGATTCCAGTGGCAGGTAGCCTGGCTTTCCCAGGTCCCTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100874.6 |
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| CDS CCA 90 bp | CTTTCTGGAGAACGCAAGGACAGGTATCCAGTGACTGGGTACATGTaGGTCTTACGGGACAGACGGACCGCCAGCACCACTGTGCACACG | + |
|
Preference number: 5 (lower is better) Translates to: LSGERKDRYPVTGYM*VLRDRRTASTTVHT Trigger: CGTGTGCACAGTGGTGCTGGCGGTCCGTCTGTCCCGTAAGACCCACATGTACCCAGTCACTGGATACCTGTCCTTGCGTTCTCCAGAAAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201194.4 |
||
| CDS CCA 90 bp | GGAGCTGAGTCTTTCTGGAGAACGCAAGGACAGGTATCCAGTGACTaGGTACATGTGGGTCTTACGGGACAGACGGACCGCCAGCACCAC | + |
|
Preference number: 5 (lower is better) Translates to: GAESFWRTQGQVSSD*VHVGLTGQTDRQHH Trigger: GTGGTGCTGGCGGTCCGTCTGTCCCGTAAGACCCACATGTACCCAGTCACTGGATACCTGTCCTTGCGTTCTCCAGAAAGACTCAGCTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201194.4 |
||
| CDS TCA 90 bp | GGGACTTCGGTGGCTGCAGACGTTGTAAACAGAGTTTTTACAGCCTaGATCCTGGGAAGCTGGGTGGTCTCTGCCTCCGTGGGTGCTGGT | + |
|
Preference number: 5 (lower is better) Translates to: GTSVAADVVNRVFTA*ILGSWVVSASVGAG Trigger: ACCAGCACCCACGGAGGCAGAGACCACCCAGCTTCCCAGGATTCAGGCTGTAAAAACTCTGTTTACAACGTCTGCAGCCACCGAAGTCCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000100874.6 ENSMUST00000201931.2 |
||
| CDS GCA 90 bp | CGCCGTCTCCATGGTGGTAGGTTCTGTGGAAGGGACTTCGGTGGCTaGAGACGTTGTAAACAGAGTTTTTACAGCCTGAATCCTGGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: RRLHGGRFCGRDFGG*RRCKQSFYSLNPGK Trigger: CTTCCCAGGATTCAGGCTGTAAAAACTCTGTTTACAACGTCTGCAGCCACCGAAGTCCCTTCCACAGAACCTACCACCATGGAGACGGCG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000100874.6 ENSMUST00000201931.2 |
||
| CDS CCA 72 bp | CCTCCATGGGTGCTGGCTGCGAGGTCTCTGCCTCCATaGGTGCTGGCTGCGAGGTCTCTACCTCTGTGGATG | + |
|
Preference number: 6 (lower is better) Translates to: PPWVLAARSLPP*VLAARSLPLWM Trigger: CATCCACAGAGGTAGAGACCTCGCAGCCAGCACCCATGGAGGCAGAGACCTCGCAGCCAGCACCCATGGAGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100874.6 |
||
| CDS TCA 72 bp | CGGAGGTTCCAGCGCTCGTGGAATCTCTCTCTAGCATaGCCACGGTGGTTGGCAGCTCAGGGTGAGCAGCCA | + |
|
Preference number: 6 (lower is better) Translates to: RRFQRSWNLSLA*PRWLAAQGEQP Trigger: TGGCTGCTCACCCTGAGCTGCCAACCACCGTGGTCATGCTAGAGAGAGATTCCACGAGCGCTGGAACCTCCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100874.6 |
||
| CDS CCA 72 bp | CCTCCGTGGGTGCTGGTTTTGAGGTCTCTGCCTCCGTaGGTGCTGGTTTTGAGGTCTCTGCCTCGTTGGGTG | + |
|
Preference number: 6 (lower is better) Translates to: PPWVLVLRSLPP*VLVLRSLPRWV Trigger: CACCCAACGAGGCAGAGACCTCAAAACCAGCACCCACGGAGGCAGAGACCTCAAAACCAGCACCCACGGAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100874.6 |
||
| CDS CCA 72 bp | GATGCAGATCATCTCCGTGGGGGAGTAGTTCCGCACTaGGTACATGTGGGTCTTACGGGACAGACGGACCGC | + |
|
Preference number: 6 (lower is better) Translates to: DADHLRGGVVPH*VHVGLTGQTDR Trigger: GCGGTCCGTCTGTCCCGTAAGACCCACATGTACCCAGTGCGGAACTACTCCCCCACGGAGATGATCTGCATC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000100874.6 |
||
| CDS CCA 72 bp | CCTCAGGTAGCAGGGACGAGATGCAGATCATCTCCGTaGGGGAGTAGTTCCGCACTGGGTACATGTGGGTCT | + |
|
Preference number: 6 (lower is better) Translates to: PQVAGTRCRSSP*GSSSALGTCGS Trigger: AGACCCACATGTACCCAGTGCGGAACTACTCCCCCACGGAGATGATCTGCATCTCGTCCCTGCTACCTGAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100874.6 |
||
| CDS CCA 72 bp | GAACGCAAGGACAGGTATCCAGTGACTGGGTACATGTaGGTCTTACGGGACAGACGGACCGCCAGCACCACT | + |
|
Preference number: 6 (lower is better) Translates to: ERKDRYPVTGYM*VLRDRRTASTT Trigger: AGTGGTGCTGGCGGTCCGTCTGTCCCGTAAGACCCACATGTACCCAGTCACTGGATACCTGTCCTTGCGTTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201194.4 |
||
| CDS CCA 72 bp | TGTGCTCAGCATCCCAACAGCTGTCCCTCCTGTACCTaGGGCAGTAGGGTCAGTGGTGGCAATCTTCTCAGT | + |
|
Preference number: 6 (lower is better) Translates to: CAQHPNSCPSCT*GSRVSGGNLLS Trigger: ACTGAGAAGATTGCCACCACTGACCCTACTGCCCCAGGTACAGGAGGGACAGCTGTTGGGATGCTGAGCACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100874.6 |
||
| CDS CCA 72 bp | GTTGGACGGTCTCTACTGAGGTTAGACTCCACTGTGTaGCAGAGTCTGTGCTCAGCATCCCAACAGCTGTCC | + |
|
Preference number: 6 (lower is better) Translates to: VGRSLLRLDSTV*QSLCSASQQLS Trigger: GGACAGCTGTTGGGATGCTGAGCACAGACTCTGCCACACAGTGGAGTCTAACCTCAGTAGAGACCGTCCAAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100874.6 |
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| CDS CCA 72 bp | TCTTTCTGGAGAACGCAAGGACAGGTATCCAGTGACTaGGTACATGTGGGTCTTACGGGACAGACGGACCGC | + |
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Preference number: 6 (lower is better) Translates to: SFWRTQGQVSSD*VHVGLTGQTDR Trigger: GCGGTCCGTCTGTCCCGTAAGACCCACATGTACCCAGTCACTGGATACCTGTCCTTGCGTTCTCCAGAAAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201194.4 |
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| CDS TCA 72 bp | CTCTCTAGCATGACCACGGTGGTTGGCAGCTCAGGGTaGGCAGCCACGGTGTTGGTGACATTTTTCAGCAAT | + |
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Preference number: 6 (lower is better) Translates to: LSSMTTVVGSSG*AATVLVTFFSN Trigger: ATTGCTGAAAAATGTCACCAACACCGTGGCTGCTCACCCTGAGCTGCCAACCACCGTGGTCATGCTAGAGAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000100874.6 |
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| CDS TCA 72 bp | GTGGCTGCAGACGTTGTAAACAGAGTTTTTACAGCCTaGATCCTGGGAAGCTGGGTGGTCTCTGCCTCCGTG | + |
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Preference number: 6 (lower is better) Translates to: VAADVVNRVFTA*ILGSWVVSASV Trigger: CACGGAGGCAGAGACCACCCAGCTTCCCAGGATTCAGGCTGTAAAAACTCTGTTTACAACGTCTGCAGCCAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000100874.6 ENSMUST00000201931.2 |
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| CDS GCA 72 bp | GCCAGAGAAGCCAAGATGAGGATAATCAGCAGACATTaGTTCACCGGGATGAGATCTGAACTCCCTGGCAGG | + |
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Preference number: 6 (lower is better) Translates to: AREAKMRIISRH*FTGMRSELPGR Trigger: CCTGCCAGGGAGTTCAGATCTCATCCCGGTGAAGCAATGTCTGCTGATTATCCTCATCTTGGCTTCTCTGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000100874.6 ENSMUST00000201931.2 ENSMUST00000202555.2 |
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| CDS CCA 72 bp | AGCTTTTGGGAGTGGAATAAGGGAGCTGAGTCTTTCTaGAGAACGCAAGGACAGGTATCCAGTGACCGCCAG | + |
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Preference number: 6 (lower is better) Translates to: SFWEWNKGAESF*RTQGQVSSDRQ Trigger: CTGGCGGTCACTGGATACCTGTCCTTGCGTTCTCCAGAAAGACTCAGCTCCCTTATTCCACTCCCAAAAGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000202555.2 |
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| CDS CCA 72 bp | AGCTTTTGGGAGTGGAATAAGGGAGCTGAGTCTTTCTaGAGAACGCAAGGACAGGTATCCAGTGACGGGACA | + |
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Preference number: 6 (lower is better) Translates to: SFWEWNKGAESF*RTQGQVSSDGT Trigger: TGTCCCGTCACTGGATACCTGTCCTTGCGTTCTCCAGAAAGACTCAGCTCCCTTATTCCACTCCCAAAAGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201931.2 |
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| CDS CCA 72 bp | AGCAGCCACGGTGTTGGTGACATTTTTCAGCAATTCTaGGGGGTCTGTGTTATACGTATAGTCAGGGTCCTC | + |
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Preference number: 6 (lower is better) Translates to: SSHGVGDIFQQF*GVCVIRIVRVL Trigger: GAGGACCCTGACTATACGTATAACACAGACCCCCCAGAATTGCTGAAAAATGTCACCAACACCGTGGCTGCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000100874.6 |
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| CDS CCA 72 bp | AGCTTTTGGGAGTGGAATAAGGGAGCTGAGTCTTTCTaGAGAACGCAAGGACAGGTATCCAGTGACTGGGTA | + |
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Preference number: 6 (lower is better) Translates to: SFWEWNKGAESF*RTQGQVSSDWV Trigger: TACCCAGTCACTGGATACCTGTCCTTGCGTTCTCCAGAAAGACTCAGCTCCCTTATTCCACTCCCAAAAGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201194.4 |
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| CDS GCA 72 bp | CATGGTGGTAGGTTCTGTGGAAGGGACTTCGGTGGCTaGAGACGTTGTAAACAGAGTTTTTACAGCCTGAAT | + |
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Preference number: 6 (lower is better) Translates to: HGGRFCGRDFGG*RRCKQSFYSLN Trigger: ATTCAGGCTGTAAAAACTCTGTTTACAACGTCTGCAGCCACCGAAGTCCCTTCCACAGAACCTACCACCATG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000100874.6 ENSMUST00000201931.2 |
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